Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:22:44 (1188730): wrapper (7.7.26015): starting
04:22:44 (1188730): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 04:22:44] Arguments: --nthreads 4
[2025-11-25 04:22:44] Threads: 4
[2025-11-25 04:22:44] Checking for CVMFS
[2025-11-25 04:22:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:22:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:22:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:22:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:22:45] 2.9.2.0 4320 8205 90260 153268 2 81 31040861 36864001 0 130560 0 3262590 99.978 259951 6769 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 04:22:45] CVMFS is ok
[2025-11-25 04:22:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:22:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:22:45] Further information can be found at the LHC@home message board.
[2025-11-25 04:22:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:22:45] Checking for apptainer binary...
[2025-11-25 04:22:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:22:45] Running /usr/bin/apptainer --version
[2025-11-25 04:22:45] apptainer version 1.4.1-1.1
[2025-11-25 04:22:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:22:45] madmaxA277
[2025-11-25 04:22:45] apptainer works
[2025-11-25 04:22:45] Set ATHENA_PROC_NUMBER=4
[2025-11-25 04:22:45] Set ATHENA_CORE_NUMBER=4
[2025-11-25 04:22:45] Starting ATLAS job with PandaID=6895327968
[2025-11-25 04:22:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:15:30]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:15:30] VERSION_ID="7"
[2025-11-25 11:15:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 11:15:30] ANSI_COLOR="0;31"
[2025-11-25 11:15:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 11:15:30] HOME_URL="https://www.centos.org/"
[2025-11-25 11:15:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 11:15:30] 
[2025-11-25 11:15:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 11:15:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 11:15:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 11:15:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 11:15:30] 
[2025-11-25 11:15:30] 2025-11-25 10:14:36,995 | INFO     | ***************************************
[2025-11-25 11:15:30] 2025-11-25 10:14:37,499 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 11:15:30] 2025-11-25 10:14:37,517 | INFO     | sufficient remaining disk space (325241012224 B)
[2025-11-25 11:15:30] 2025-11-25 10:14:37,517 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 11:15:30] 2025-11-25 10:14:37,517 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 11:15:30] 2025-11-25 10:14:37,517 | INFO     | update_server=False
[2025-11-25 11:15:30] 2025-11-25 10:14:37,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 11:15:30] 2025-11-25 10:14:37,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:15:30] 2025-11-25 10:14:37,658 | INFO     | all data control threads have been joined
[2025-11-25 11:15:30] 2025-11-25 10:14:37,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 11:15:30] 2025-11-25 10:14:37,852 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 11:15:30] 2025-11-25 10:14:37,852 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 11:15:30] 2025-11-25 10:14:37,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:15:30] 2025-11-25 10:14:37,852 | INFO     | will abort loop
[2025-11-25 11:15:30] 2025-11-25 10:14:38,476 | INFO     | all job control threads have been joined
[2025-11-25 11:15:30] 2025-11-25 10:14:38,523 | INFO     | [job] retrieve thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:38,523 | INFO     | [job] queue monitor thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:38,605 | INFO     | all payload control threads have been joined
[2025-11-25 11:15:30] 2025-11-25 10:14:38,664 | INFO     | [data] control thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:38,699 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:38,858 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:39,142 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:39,198 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:39,214 | INFO     | [job] validate thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:39,482 | INFO     | [job] control thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:39,537 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:39,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:39,574 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:39,611 | INFO     | [payload] control thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:39,826 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:39,984 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:14:40,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:15:30] 2025-11-25 10:14:44,136 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:15:30] 2025-11-25 10:15:07,541 | INFO     | PID=1192541 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 11:15:30] 2025-11-25 10:15:07,541 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:15:30] 2025-11-25 10:15:07,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:15:30] 2025-11-25 10:15:07,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:15:30] 2025-11-25 10:15:23,882 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:15:30] 2025-11-25 10:15:25,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140588341827392)>', '<ExcThread(monitor, started 140587474863872)>']
[2025-11-25 11:15:30] 2025-11-25 10:15:26,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:15:30] 2025-11-25 10:15:26,642 | INFO     | [monitor] control thread has ended
[2025-11-25 11:15:30] 2025-11-25 10:15:30,727 | INFO     | all workflow threads have been joined
[2025-11-25 11:15:30] 2025-11-25 10:15:30,727 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:15:30] 2025-11-25 10:15:30,727 | INFO     | traces error code: 0
[2025-11-25 11:15:30] 2025-11-25 10:15:30,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:15:30] 2025-11-25 10:15:30,807 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:15:30] 2025-11-25 10:15:30,811 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:15:30] 2025-11-25 10:15:30,815 [wrapper] pilotpid: 1192541
[2025-11-25 11:15:30] 2025-11-25 10:15:30,818 [wrapper] Pilot exit status: 0
[2025-11-25 11:15:30] 2025-11-25 10:15:30,829 [wrapper] pandaids: 6895327968
[2025-11-25 11:15:30] 2025-11-25 10:15:30,850 [wrapper] cleanup supervisor_pilot 1243838 1192542
[2025-11-25 11:15:30] 2025-11-25 10:15:30,854 [wrapper] Test setup, not cleaning
[2025-11-25 11:15:30] 2025-11-25 10:15:30,858 [wrapper] apfmon messages muted
[2025-11-25 11:15:30] 2025-11-25 10:15:30,861 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:15:30] 2025-11-25 10:15:30,865 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:15:30]  *** Error codes and diagnostics ***
[2025-11-25 11:15:30]     "exeErrorCode": 0,
[2025-11-25 11:15:30]     "exeErrorDiag": "",
[2025-11-25 11:15:30]     "pilotErrorCode": 0,
[2025-11-25 11:15:30]     "pilotErrorDiag": "",
[2025-11-25 11:15:30]  *** Listing of results directory ***
[2025-11-25 11:15:30] total 1313060
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc    576529 Nov 21 16:53 pilot3.tar.gz
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc      5112 Nov 21 17:01 queuedata.json
[2025-11-25 11:15:30] -rwx------ 1 boinc boinc     36292 Nov 21 17:03 runpilot2-wrapper.sh
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc       100 Nov 25 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:15:30] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 04:22 run_atlas
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc       105 Nov 25 04:22 job.xml
[2025-11-25 11:15:30] -rw-r--r-- 2 boinc boinc 408982546 Nov 25 04:22 EVNT.47483658._000055.pool.root.1
[2025-11-25 11:15:30] -rw-r--r-- 2 boinc boinc    590099 Nov 25 04:22 input.tar.gz
[2025-11-25 11:15:30] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:22 start_atlas.sh
[2025-11-25 11:15:30] drwxrwx--x 2 boinc boinc      4096 Nov 25 04:22 shared
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:22 boinc_setup_complete
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc      6374 Nov 25 04:22 init_data.xml
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:22 boinc_lockfile
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc      2783 Nov 25 04:22 pandaJob.out
[2025-11-25 11:15:30] -rw------- 1 boinc boinc    991801 Nov 25 04:22 agis_schedconf.cvmfs.json
[2025-11-25 11:15:30] drwx------ 5 boinc boinc      4096 Nov 25 04:22 pilot3
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc       531 Nov 25 11:10 boinc_task_state.xml
[2025-11-25 11:15:30] -rw------- 1 boinc boinc 922203538 Nov 25 11:14 HITS.47556137._000547.pool.root.1
[2025-11-25 11:15:30] -rw------- 1 boinc boinc      1029 Nov 25 11:14 memory_monitor_summary.json
[2025-11-25 11:15:30] -rw------- 1 boinc boinc   1516240 Nov 25 11:14 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:15:30] -rw------- 1 boinc boinc   1254256 Nov 25 11:14 log.47556137._000547.job.log.tgz.1
[2025-11-25 11:15:30] -rw------- 1 boinc boinc      8588 Nov 25 11:14 heartbeat.json
[2025-11-25 11:15:30] -rw------- 1 boinc boinc        95 Nov 25 11:15 pilot_heartbeat.json
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc      8192 Nov 25 11:15 boinc_mmap_file
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc        28 Nov 25 11:15 wrapper_checkpoint.txt
[2025-11-25 11:15:30] -rw------- 1 boinc boinc      4938 Nov 25 11:15 pilotlog.txt
[2025-11-25 11:15:30] -rw------- 1 boinc boinc   3483803 Nov 25 11:15 log.47556137._000547.job.log.1
[2025-11-25 11:15:30] -rw------- 1 boinc boinc       353 Nov 25 11:15 output.list
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc       620 Nov 25 11:15 runtime_log
[2025-11-25 11:15:30] -rw------- 1 boinc boinc   4761600 Nov 25 11:15 result.tar.gz
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc      8918 Nov 25 11:15 runtime_log.err
[2025-11-25 11:15:30] -rw------- 1 boinc boinc       669 Nov 25 11:15 RegKDmUmig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDXJKDmt86dIo.diag
[2025-11-25 11:15:30] -rw-r--r-- 1 boinc boinc      8777 Nov 25 11:15 stderr.txt
[2025-11-25 11:15:30] HITS file was successfully produced:
[2025-11-25 11:15:30] -rw------- 1 boinc boinc 922203538 Nov 25 11:14 shared/HITS.pool.root.1
[2025-11-25 11:15:30]  *** Contents of shared directory: ***
[2025-11-25 11:15:30] total 1305244
[2025-11-25 11:15:30] -rw-r--r-- 2 boinc boinc 408982546 Nov 25 04:22 ATLAS.root_0
[2025-11-25 11:15:30] -rw-r--r-- 2 boinc boinc    590099 Nov 25 04:22 input.tar.gz
[2025-11-25 11:15:30] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:22 start_atlas.sh
[2025-11-25 11:15:30] -rw------- 1 boinc boinc 922203538 Nov 25 11:14 HITS.pool.root.1
[2025-11-25 11:15:30] -rw------- 1 boinc boinc   4761600 Nov 25 11:15 result.tar.gz
11:15:32 (1188730): run_atlas exited; CPU time 96665.481914
11:15:32 (1188730): called boinc_finish(0)

</stderr_txt>
]]>

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