Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:11:23 (1211482): wrapper (7.7.26015): starting
18:11:23 (1211482): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 18:11:23] Arguments: --nthreads 3
[2025-11-26 18:11:23] Threads: 3
[2025-11-26 18:11:23] Checking for CVMFS
[2025-11-26 18:11:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:11:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:11:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:11:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:11:28] 2.13.3.0 1129478 738 53108 153316 0 80 41399163 52428800 0 130560 0 269038 99.978 30371 16 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://134.75.124.180:3128 0
[2025-11-26 18:11:28] CVMFS is ok
[2025-11-26 18:11:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:11:28] Checking for apptainer binary...
[2025-11-26 18:11:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:11:28] Running /usr/bin/apptainer --version
[2025-11-26 18:11:28] apptainer version 1.4.4-1.el9
[2025-11-26 18:11:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:11:28] testio004
[2025-11-26 18:11:28] apptainer works
[2025-11-26 18:11:28] Set ATHENA_PROC_NUMBER=3
[2025-11-26 18:11:28] Set ATHENA_CORE_NUMBER=3
[2025-11-26 18:11:28] Starting ATLAS job with PandaID=6893848265
[2025-11-26 18:11:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:44:06]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:44:06] 2025-11-26 20:43:47,365 | INFO     | extracted standard info from prmon json
[2025-11-27 05:44:06] 2025-11-26 20:43:47,365 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:44:06] 2025-11-26 20:43:47,365 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:44:06] 2025-11-26 20:43:47,370 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:44:06] 2025-11-26 20:43:47,371 | INFO     | sum of square deviations: 97500604482.58664
[2025-11-27 05:44:06] 2025-11-26 20:43:47,375 | INFO     | sum of deviations: 225256059069.86035
[2025-11-27 05:44:06] 2025-11-26 20:43:47,375 | INFO     | mean x: 1764169042.5455883
[2025-11-27 05:44:06] 2025-11-26 20:43:47,375 | INFO     | mean y: 2190388.536764706
[2025-11-27 05:44:06] 2025-11-26 20:43:47,375 | INFO     | intersect: -4073576814.812634
[2025-11-27 05:44:06] 2025-11-26 20:43:47,376 | INFO     | chi2: 6.469497784821945
[2025-11-27 05:44:06] 2025-11-26 20:43:47,376 | INFO     | sum of square deviations: 95365652977.57639
[2025-11-27 05:44:06] 2025-11-26 20:43:47,381 | INFO     | sum of deviations: 381018114573.44995
[2025-11-27 05:44:06] 2025-11-26 20:43:47,381 | INFO     | mean x: 1764168890.0459259
[2025-11-27 05:44:06] 2025-11-26 20:43:47,381 | INFO     | mean y: 2201511.7274074075
[2025-11-27 05:44:06] 2025-11-26 20:43:47,381 | INFO     | intersect: -7046251293.733762
[2025-11-27 05:44:06] 2025-11-26 20:43:47,381 | INFO     | chi2: 3.9942195487365577
[2025-11-27 05:44:06] 2025-11-26 20:43:47,381 | INFO     | current chi2=3.9942195487365577 (change=38.26074787277344 %)
[2025-11-27 05:44:06] 2025-11-26 20:43:47,382 | INFO     | sum of square deviations: 93262097410.06581
[2025-11-27 05:44:06] 2025-11-26 20:43:47,386 | INFO     | sum of deviations: 414645938468.6181
[2025-11-27 05:44:06] 2025-11-26 20:43:47,386 | INFO     | mean x: 1764168737.5462687
[2025-11-27 05:44:06] 2025-11-26 20:43:47,386 | INFO     | mean y: 2203935.867164179
[2025-11-27 05:44:06] 2025-11-26 20:43:47,386 | INFO     | intersect: -7841340463.316787
[2025-11-27 05:44:06] 2025-11-26 20:43:47,386 | INFO     | chi2: 3.606847641617372
[2025-11-27 05:44:06] 2025-11-26 20:43:47,386 | INFO     | current chi2=3.606847641617372 (change=9.698312834148501 %)
[2025-11-27 05:44:06] 2025-11-26 20:43:47,386 | INFO     | right removable region: 669
[2025-11-27 05:44:06] 2025-11-26 20:43:47,387 | INFO     | sum of square deviations: 95365634067.57639
[2025-11-27 05:44:06] 2025-11-26 20:43:47,391 | INFO     | sum of deviations: 73335586470.46194
[2025-11-27 05:44:06] 2025-11-26 20:43:47,391 | INFO     | mean x: 1764169195.0459259
[2025-11-27 05:44:06] 2025-11-26 20:43:47,391 | INFO     | mean y: 2201231.4044444445
[2025-11-27 05:44:06] 2025-11-26 20:43:47,391 | INFO     | intersect: -1354434036.8111398
[2025-11-27 05:44:06] 2025-11-26 20:43:47,392 | INFO     | chi2: 4.088237956641991
[2025-11-27 05:44:06] 2025-11-26 20:43:47,392 | INFO     | current chi2=4.088237956641991 (change=36.807491205370155 %)
[2025-11-27 05:44:06] 2025-11-26 20:43:47,392 | INFO     | sum of square deviations: 93262059590.0658
[2025-11-27 05:44:06] 2025-11-26 20:43:47,396 | INFO     | sum of deviations: -31884159421.331367
[2025-11-27 05:44:06] 2025-11-26 20:43:47,397 | INFO     | mean x: 1764169347.5462687
[2025-11-27 05:44:06] 2025-11-26 20:43:47,397 | INFO     | mean y: 2208853.6074626865
[2025-11-27 05:44:06] 2025-11-26 20:43:47,397 | INFO     | intersect: 605337896.3353908
[2025-11-27 05:44:06] 2025-11-26 20:43:47,397 | INFO     | chi2: 2.9897456699307026
[2025-11-27 05:44:06] 2025-11-26 20:43:47,397 | INFO     | current chi2=2.9897456699307026 (change=26.8695780030762 %)
[2025-11-27 05:44:06] 2025-11-26 20:43:47,397 | INFO     | sum of square deviations: 91189648487.55508
[2025-11-27 05:44:06] 2025-11-26 20:43:47,402 | INFO     | sum of deviations: -36721576648.41656
[2025-11-27 05:44:06] 2025-11-26 20:43:47,402 | INFO     | mean x: 1764169500.0466166
[2025-11-27 05:44:06] 2025-11-26 20:43:47,402 | INFO     | mean y: 2209208.3037593984
[2025-11-27 05:44:06] 2025-11-26 20:43:47,402 | INFO     | intersect: 712630693.5406686
[2025-11-27 05:44:06] 2025-11-26 20:43:47,402 | INFO     | chi2: 2.9869116464221785
[2025-11-27 05:44:06] 2025-11-26 20:43:47,402 | INFO     | current chi2=2.9869116464221785 (change=0.0947914579165427 %)
[2025-11-27 05:44:06] 2025-11-26 20:43:47,402 | INFO     | left removable region: 30
[2025-11-27 05:44:06] 2025-11-26 20:43:47,403 | INFO     | sum of square deviations: 80906508583.49522
[2025-11-27 05:44:06] 2025-11-26 20:43:47,406 | INFO     | sum of deviations: 156145519273.77948
[2025-11-27 05:44:06] 2025-11-26 20:43:47,406 | INFO     | mean x: 1764169622.0485134
[2025-11-27 05:44:06] 2025-11-26 20:43:47,407 | INFO     | mean y: 2222900.136150235
[2025-11-27 05:44:06] 2025-11-26 20:43:47,407 | INFO     | intersect: -3402536328.072434
[2025-11-27 05:44:06] 2025-11-26 20:43:47,407 | INFO     | chi2: 0.08075276993394509
[2025-11-27 05:44:06] 2025-11-26 20:43:47,407 | INFO     | current memory leak: 1.93 B/s (using 639 data points, chi2=0.08)
[2025-11-27 05:44:06] 2025-11-26 20:43:47,407 | INFO     | could have reported an average CPU frequency of 3607 MHz (25 samples)
[2025-11-27 05:44:06] 2025-11-26 20:43:47,407 | INFO     | ..............................
[2025-11-27 05:44:06] 2025-11-26 20:43:47,407 | INFO     | . Timing measurements:
[2025-11-27 05:44:06] 2025-11-26 20:43:47,407 | INFO     | . get job = 0 s
[2025-11-27 05:44:06] 2025-11-26 20:43:47,407 | INFO     | . initial setup = 6 s
[2025-11-27 05:44:06] 2025-11-26 20:43:47,408 | INFO     | . payload setup = 4 s
[2025-11-27 05:44:06] 2025-11-26 20:43:47,408 | INFO     | . stage-in = 0 s
[2025-11-27 05:44:06] 2025-11-26 20:43:47,408 | INFO     | . payload execution = 41432 s
[2025-11-27 05:44:06] 2025-11-26 20:43:47,408 | INFO     | . stage-out = 6 s
[2025-11-27 05:44:06] 2025-11-26 20:43:47,408 | INFO     | . log creation = 0 s
[2025-11-27 05:44:06] 2025-11-26 20:43:47,408 | INFO     | ..............................
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | 
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | job summary report
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | --------------------------------------------------
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | PanDA job id: 6893848265
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | task id: 47523449
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | errors: (none)
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | pilot state: finished 
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | transexitcode: 0
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | exeerrorcode: 0
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | exeerrordiag: 
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | exitcode: 0
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | exitmsg: OK
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | cpuconsumptiontime: 118389 s
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | nevents: 1000
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | neventsw: 0
[2025-11-27 05:44:06] 2025-11-26 20:43:47,443 | INFO     | pid: 1221693
[2025-11-27 05:44:06] 2025-11-26 20:43:47,444 | INFO     | pgrp: 1221693
[2025-11-27 05:44:06] 2025-11-26 20:43:47,444 | INFO     | corecount: 3
[2025-11-27 05:44:06] 2025-11-26 20:43:47,444 | INFO     | event service: False
[2025-11-27 05:44:06] 2025-11-26 20:43:47,444 | INFO     | sizes: {0: 2284201, 1: 2284343, 3: 2284605, 11: 2284633, 41439: 2328469, 41440: 2328468, 41446: 2337646, 41448: 2337702, 41503: 2338012}
[2025-11-27 05:44:06] 2025-11-26 20:43:47,444 | INFO     | --------------------------------------------------
[2025-11-27 05:44:06] 2025-11-26 20:43:47,444 | INFO     | 
[2025-11-27 05:44:06] 2025-11-26 20:43:47,444 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-27 05:44:06] 2025-11-26 20:43:47,454 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:44:06] 2025-11-26 20:43:47,455 | INFO     | job 6893848265 has completed (purged errors)
[2025-11-27 05:44:06] 2025-11-26 20:43:47,456 | INFO     | overall cleanup function is called
[2025-11-27 05:44:06] 2025-11-26 20:43:48,464 | INFO     | --- collectZombieJob: --- 10, [1221693]
[2025-11-27 05:44:06] 2025-11-26 20:43:48,464 | INFO     | zombie collector waiting for pid 1221693
[2025-11-27 05:44:06] 2025-11-26 20:43:48,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:44:06] 2025-11-26 20:43:48,464 | INFO     | collected zombie processes
[2025-11-27 05:44:06] 2025-11-26 20:43:48,464 | INFO     | will attempt to kill all subprocesses of pid=1221693
[2025-11-27 05:44:06] 2025-11-26 20:43:48,495 | INFO     | process IDs to be killed: [1221693] (in reverse order)
[2025-11-27 05:44:06] 2025-11-26 20:43:48,513 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:44:06] 2025-11-26 20:43:48,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:44:06] 2025-11-26 20:43:48,515 | INFO     | did not find any defunct processes belonging to 1221693
[2025-11-27 05:44:06] 2025-11-26 20:43:48,516 | INFO     | did not find any defunct processes belonging to 1221693
[2025-11-27 05:44:06] 2025-11-26 20:43:48,517 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:44:06] 2025-11-26 20:43:48,517 | INFO     | ready for new job
[2025-11-27 05:44:06] 2025-11-26 20:43:48,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:44:06] 2025-11-26 20:43:48,518 | INFO     | ***************************************
[2025-11-27 05:44:06] 2025-11-26 20:43:48,518 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:44:06] 2025-11-26 20:43:48,518 | INFO     | ***************************************
[2025-11-27 05:44:06] 2025-11-26 20:43:48,518 | INFO     | 
[2025-11-27 05:44:06] 2025-11-26 20:43:48,519 | INFO     | architecture information:
[2025-11-27 05:44:06] 2025-11-26 20:43:48,519 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:44:06] 2025-11-26 20:43:48,526 | INFO     | cat /etc/os-release:
[2025-11-27 05:44:06] NAME="CentOS Linux"
[2025-11-27 05:44:06] VERSION="7 (Core)"
[2025-11-27 05:44:06] ID="centos"
[2025-11-27 05:44:06] ID_LIKE="rhel fedora"
[2025-11-27 05:44:06] VERSION_ID="7"
[2025-11-27 05:44:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:44:06] ANSI_COLOR="0;31"
[2025-11-27 05:44:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:44:06] HOME_URL="https://www.centos.org/"
[2025-11-27 05:44:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:44:06] 
[2025-11-27 05:44:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:44:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:44:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:44:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:44:06] 
[2025-11-27 05:44:06] 2025-11-26 20:43:48,526 | INFO     | ***************************************
[2025-11-27 05:44:06] 2025-11-26 20:43:49,029 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-27 05:44:06] 2025-11-26 20:43:49,037 | INFO     | sufficient remaining disk space (323327361024 B)
[2025-11-27 05:44:06] 2025-11-26 20:43:49,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:44:06] 2025-11-26 20:43:49,038 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:44:06] 2025-11-26 20:43:49,038 | INFO     | update_server=False
[2025-11-27 05:44:06] 2025-11-26 20:43:49,038 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:44:06] 2025-11-26 20:43:49,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:44:06] 2025-11-26 20:43:49,038 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 05:44:06] 2025-11-26 20:43:49,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:44:06] 2025-11-26 20:43:49,038 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:44:06] 2025-11-26 20:43:49,039 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:44:06] 2025-11-26 20:43:49,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:44:06] 2025-11-26 20:43:49,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:44:06] 2025-11-26 20:43:49,216 | INFO     | all payload control threads have been joined
[2025-11-27 05:44:06] 2025-11-26 20:43:49,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:44:06] 2025-11-26 20:43:49,828 | INFO     | aborting loop
[2025-11-27 05:44:06] 2025-11-26 20:43:49,984 | INFO     | all data control threads have been joined
[2025-11-27 05:44:06] 2025-11-26 20:43:50,039 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:50,044 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:50,108 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:50,122 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:50,221 | INFO     | [payload] control thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:50,396 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:50,609 | INFO     | all job control threads have been joined
[2025-11-27 05:44:06] 2025-11-26 20:43:50,747 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:50,801 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:50,833 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:50,878 | INFO     | [job] validate thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:50,989 | INFO     | [data] control thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:51,045 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:51,091 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:51,280 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:51,614 | INFO     | [job] control thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:43:53,042 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:44:06] 2025-11-26 20:44:00,131 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:44:06] 2025-11-26 20:44:01,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139984218236736)>', '<ExcThread(monitor, started 139983444764416)>']
[2025-11-27 05:44:06] 2025-11-26 20:44:02,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:44:06] 2025-11-26 20:44:02,098 | INFO     | [monitor] control thread has ended
[2025-11-27 05:44:06] 2025-11-26 20:44:06,617 | INFO     | all workflow threads have been joined
[2025-11-27 05:44:06] 2025-11-26 20:44:06,617 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:44:06] 2025-11-26 20:44:06,617 | INFO     | traces error code: 0
[2025-11-27 05:44:06] 2025-11-26 20:44:06,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:44:06] 2025-11-26 20:44:06,673 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:44:06] 2025-11-26 20:44:06,674 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:44:06] 2025-11-26 20:44:06,676 [wrapper] pilotpid: 1215161
[2025-11-27 05:44:06] 2025-11-26 20:44:06,678 [wrapper] Pilot exit status: 0
[2025-11-27 05:44:06] 2025-11-26 20:44:06,683 [wrapper] pandaids: 6893848265
[2025-11-27 05:44:06] 2025-11-26 20:44:06,695 [wrapper] cleanup supervisor_pilot 1285820 1215162
[2025-11-27 05:44:06] 2025-11-26 20:44:06,697 [wrapper] Test setup, not cleaning
[2025-11-27 05:44:06] 2025-11-26 20:44:06,699 [wrapper] apfmon messages muted
[2025-11-27 05:44:06] 2025-11-26 20:44:06,700 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:44:06] 2025-11-26 20:44:06,702 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:44:06]  *** Error codes and diagnostics ***
[2025-11-27 05:44:06]     "exeErrorCode": 0,
[2025-11-27 05:44:06]     "exeErrorDiag": "",
[2025-11-27 05:44:06]     "pilotErrorCode": 0,
[2025-11-27 05:44:06]     "pilotErrorDiag": "",
[2025-11-27 05:44:06]  *** Listing of results directory ***
[2025-11-27 05:44:06] total 1331272
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc    576529 Nov 20 19:06 pilot3.tar.gz
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc      5112 Nov 20 19:32 queuedata.json
[2025-11-27 05:44:06] -rwx------. 1 boinc boinc     36292 Nov 20 19:32 runpilot2-wrapper.sh
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc       100 Nov 26 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:44:06] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 18:11 run_atlas
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc       105 Nov 26 18:11 job.xml
[2025-11-27 05:44:06] -rw-r--r--. 2 boinc boinc 412676236 Nov 26 18:11 EVNT.47493127._000261.pool.root.1
[2025-11-27 05:44:06] -rw-r--r--. 2 boinc boinc     15847 Nov 26 18:11 start_atlas.sh
[2025-11-27 05:44:06] drwxrwx--x. 2 boinc boinc        68 Nov 26 18:11 shared
[2025-11-27 05:44:06] -rw-r--r--. 2 boinc boinc    590103 Nov 26 18:11 input.tar.gz
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc         0 Nov 26 18:11 boinc_lockfile
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc      2786 Nov 26 18:11 pandaJob.out
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc    991827 Nov 26 18:11 agis_schedconf.cvmfs.json
[2025-11-27 05:44:06] drwx------. 5 boinc boinc      4096 Nov 26 18:11 pilot3
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc      9322 Nov 26 18:55 init_data.xml
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc       532 Nov 27 05:35 boinc_task_state.xml
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc 932674026 Nov 27 05:42 HITS.47523449._002606.pool.root.1
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc      1036 Nov 27 05:42 memory_monitor_summary.json
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc        95 Nov 27 05:42 pilot_heartbeat.json
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc   1516240 Nov 27 05:42 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc   1320283 Nov 27 05:42 log.47523449._002606.job.log.tgz.1
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc      8192 Nov 27 05:43 boinc_mmap_file
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc        29 Nov 27 05:43 wrapper_checkpoint.txt
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc      8588 Nov 27 05:43 heartbeat.json
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc      4553 Nov 27 05:44 pilotlog.txt
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc   5659259 Nov 27 05:44 log.47523449._002606.job.log.1
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc       353 Nov 27 05:44 output.list
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc       620 Nov 27 05:44 runtime_log
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc   7004160 Nov 27 05:44 result.tar.gz
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc      8776 Nov 27 05:44 runtime_log.err
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc       653 Nov 27 05:44 NvVLDmn8Gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQVHKDmmhS5Nn.diag
[2025-11-27 05:44:06] -rw-r--r--. 1 boinc boinc     20742 Nov 27 05:44 stderr.txt
[2025-11-27 05:44:06] HITS file was successfully produced:
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc 932674026 Nov 27 05:42 shared/HITS.pool.root.1
[2025-11-27 05:44:06]  *** Contents of shared directory: ***
[2025-11-27 05:44:06] total 1321260
[2025-11-27 05:44:06] -rw-r--r--. 2 boinc boinc 412676236 Nov 26 18:11 ATLAS.root_0
[2025-11-27 05:44:06] -rw-r--r--. 2 boinc boinc     15847 Nov 26 18:11 start_atlas.sh
[2025-11-27 05:44:06] -rw-r--r--. 2 boinc boinc    590103 Nov 26 18:11 input.tar.gz
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc 932674026 Nov 27 05:42 HITS.pool.root.1
[2025-11-27 05:44:06] -rw-------. 1 boinc boinc   7004160 Nov 27 05:44 result.tar.gz
05:44:08 (1211482): run_atlas exited; CPU time 118420.237003
05:44:08 (1211482): called boinc_finish(0)

</stderr_txt>
]]>

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