Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:52:40 (21638): wrapper (7.7.26015): starting
07:52:40 (21638): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 07:52:40] Arguments: --nthreads 12
[2025-11-22 07:52:40] Threads: 12
[2025-11-22 07:52:40] Checking for CVMFS
[2025-11-22 07:52:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 07:52:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 07:52:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 07:52:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 07:52:41] 2.11.2.0 3081 281899 96664 153172 3 81 10590499 20275200 1 130560 1 127053823 99.969 16205422 14076 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 07:52:41] CVMFS is ok
[2025-11-22 07:52:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 07:52:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 07:52:41] Further information can be found at the LHC@home message board.
[2025-11-22 07:52:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 07:52:41] Checking for apptainer binary...
[2025-11-22 07:52:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 07:52:41] Running /usr/bin/apptainer --version
[2025-11-22 07:52:41] apptainer version 1.3.2-1.el7
[2025-11-22 07:52:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 07:52:42] c-205-29.aglt2.org
[2025-11-22 07:52:42] apptainer works
[2025-11-22 07:52:42] Set ATHENA_PROC_NUMBER=12
[2025-11-22 07:52:42] Set ATHENA_CORE_NUMBER=12
[2025-11-22 07:52:42] Starting ATLAS job with PandaID=6894278658
[2025-11-22 07:52:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 15:02:45]  *** The last 200 lines of the pilot log: ***
[2025-11-22 15:02:45] 2025-11-22 20:02:10,047 | INFO     | monitor loop #1928: job 0:6894278658 is in state 'finished'
[2025-11-22 15:02:45] 2025-11-22 20:02:10,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 15:02:45] 2025-11-22 20:02:10,643 | INFO     | time since job start (25753s) is within the limit (172800.0s)
[2025-11-22 15:02:45] 2025-11-22 20:02:12,198 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 15:02:45] 2025-11-22 20:02:12,200 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-22 15:02:45] 2025-11-22 20:02:12,202 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894278658/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 15:02:45] 2025-11-22 20:02:12,202 | INFO     | extracted standard info from prmon json
[2025-11-22 15:02:45] 2025-11-22 20:02:12,202 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 15:02:45] 2025-11-22 20:02:12,202 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 15:02:45] 2025-11-22 20:02:12,209 | INFO     | fitting pss+swap vs Time
[2025-11-22 15:02:45] 2025-11-22 20:02:12,210 | INFO     | sum of square deviations: 23303249875.326855
[2025-11-22 15:02:45] 2025-11-22 20:02:12,213 | INFO     | sum of deviations: 392650773047.0615
[2025-11-22 15:02:45] 2025-11-22 20:02:12,214 | INFO     | mean x: 1763828846.7393365
[2025-11-22 15:02:45] 2025-11-22 20:02:12,214 | INFO     | mean y: 3416700.2914691945
[2025-11-22 15:02:45] 2025-11-22 20:02:12,214 | INFO     | intersect: -29716419112.317196
[2025-11-22 15:02:45] 2025-11-22 20:02:12,214 | INFO     | chi2: 6.0295647547715046
[2025-11-22 15:02:45] 2025-11-22 20:02:12,215 | INFO     | sum of square deviations: 22484744402.537235
[2025-11-22 15:02:45] 2025-11-22 20:02:12,219 | INFO     | sum of deviations: 557277016319.1439
[2025-11-22 15:02:45] 2025-11-22 20:02:12,219 | INFO     | mean x: 1763828694.2422063
[2025-11-22 15:02:45] 2025-11-22 20:02:12,219 | INFO     | mean y: 3447349.5827338127
[2025-11-22 15:02:45] 2025-11-22 20:02:12,219 | INFO     | intersect: -43712468403.25414
[2025-11-22 15:02:45] 2025-11-22 20:02:12,219 | INFO     | chi2: 2.7927888213542604
[2025-11-22 15:02:45] 2025-11-22 20:02:12,220 | INFO     | current chi2=2.7927888213542604 (change=53.68175092332853 %)
[2025-11-22 15:02:45] 2025-11-22 20:02:12,220 | INFO     | sum of square deviations: 21685634642.240257
[2025-11-22 15:02:45] 2025-11-22 20:02:12,224 | INFO     | sum of deviations: 576198892238.2327
[2025-11-22 15:02:45] 2025-11-22 20:02:12,224 | INFO     | mean x: 1763828541.7451456
[2025-11-22 15:02:45] 2025-11-22 20:02:12,224 | INFO     | mean y: 3450926.1165048545
[2025-11-22 15:02:45] 2025-11-22 20:02:12,224 | INFO     | intersect: -46862415285.246475
[2025-11-22 15:02:45] 2025-11-22 20:02:12,224 | INFO     | chi2: 2.604525714933912
[2025-11-22 15:02:45] 2025-11-22 20:02:12,225 | INFO     | current chi2=2.604525714933912 (change=6.741043396509204 %)
[2025-11-22 15:02:45] 2025-11-22 20:02:12,225 | INFO     | right removable region: 411
[2025-11-22 15:02:45] 2025-11-22 20:02:12,225 | INFO     | sum of square deviations: 22484682792.537247
[2025-11-22 15:02:45] 2025-11-22 20:02:12,229 | INFO     | sum of deviations: 248386471950.90414
[2025-11-22 15:02:45] 2025-11-22 20:02:12,229 | INFO     | mean x: 1763828999.2422063
[2025-11-22 15:02:45] 2025-11-22 20:02:12,229 | INFO     | mean y: 3443502.278177458
[2025-11-22 15:02:45] 2025-11-22 20:02:12,229 | INFO     | intersect: -19481432770.55394
[2025-11-22 15:02:45] 2025-11-22 20:02:12,230 | INFO     | chi2: 3.589254665600347
[2025-11-22 15:02:45] 2025-11-22 20:02:12,230 | INFO     | current chi2=3.589254665600347 (change=40.47240867991367 %)
[2025-11-22 15:02:45] 2025-11-22 20:02:12,230 | INFO     | sum of square deviations: 21685537102.72817
[2025-11-22 15:02:45] 2025-11-22 20:02:12,234 | INFO     | sum of deviations: 216463897307.43665
[2025-11-22 15:02:45] 2025-11-22 20:02:12,234 | INFO     | mean x: 1763829151.7427185
[2025-11-22 15:02:45] 2025-11-22 20:02:12,234 | INFO     | mean y: 3449587.145631068
[2025-11-22 15:02:45] 2025-11-22 20:02:12,234 | INFO     | intersect: -17603000765.548912
[2025-11-22 15:02:45] 2025-11-22 20:02:12,235 | INFO     | chi2: 3.5406174804959702
[2025-11-22 15:02:45] 2025-11-22 20:02:12,235 | INFO     | current chi2=3.5406174804959702 (change=1.3550775755902338 %)
[2025-11-22 15:02:45] 2025-11-22 20:02:12,235 | INFO     | left removable region: 20
[2025-11-22 15:02:45] 2025-11-22 20:02:12,236 | INFO     | sum of square deviations: 18535754580.42955
[2025-11-22 15:02:45] 2025-11-22 20:02:12,239 | INFO     | sum of deviations: 360178592870.2963
[2025-11-22 15:02:45] 2025-11-22 20:02:12,239 | INFO     | mean x: 1763829121.2455244
[2025-11-22 15:02:45] 2025-11-22 20:02:12,239 | INFO     | mean y: 3492821.455242967
[2025-11-22 15:02:45] 2025-11-22 20:02:12,239 | INFO     | intersect: -34270455303.894928
[2025-11-22 15:02:45] 2025-11-22 20:02:12,240 | INFO     | chi2: 0.05953211697345969
[2025-11-22 15:02:45] 2025-11-22 20:02:12,240 | INFO     | current memory leak: 19.43 B/s (using 391 data points, chi2=0.06)
[2025-11-22 15:02:45] 2025-11-22 20:02:12,241 | INFO     | could have reported an average CPU frequency of 2387 MHz (18 samples)
[2025-11-22 15:02:45] 2025-11-22 20:02:12,241 | INFO     | ..............................
[2025-11-22 15:02:45] 2025-11-22 20:02:12,241 | INFO     | . Timing measurements:
[2025-11-22 15:02:45] 2025-11-22 20:02:12,241 | INFO     | . get job = 0 s
[2025-11-22 15:02:45] 2025-11-22 20:02:12,241 | INFO     | . initial setup = 2 s
[2025-11-22 15:02:45] 2025-11-22 20:02:12,241 | INFO     | . payload setup = 7 s
[2025-11-22 15:02:45] 2025-11-22 20:02:12,241 | INFO     | . stage-in = 0 s
[2025-11-22 15:02:45] 2025-11-22 20:02:12,241 | INFO     | . payload execution = 25718 s
[2025-11-22 15:02:45] 2025-11-22 20:02:12,241 | INFO     | . stage-out = 3 s
[2025-11-22 15:02:45] 2025-11-22 20:02:12,242 | INFO     | . log creation = 0 s
[2025-11-22 15:02:45] 2025-11-22 20:02:12,242 | INFO     | ..............................
[2025-11-22 15:02:45] 2025-11-22 20:02:12,323 | INFO     | 
[2025-11-22 15:02:45] 2025-11-22 20:02:12,323 | INFO     | job summary report
[2025-11-22 15:02:45] 2025-11-22 20:02:12,323 | INFO     | --------------------------------------------------
[2025-11-22 15:02:45] 2025-11-22 20:02:12,323 | INFO     | PanDA job id: 6894278658
[2025-11-22 15:02:45] 2025-11-22 20:02:12,324 | INFO     | task id: 47533967
[2025-11-22 15:02:45] 2025-11-22 20:02:12,324 | INFO     | errors: (none)
[2025-11-22 15:02:45] 2025-11-22 20:02:12,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 15:02:45] 2025-11-22 20:02:12,324 | INFO     | pilot state: finished 
[2025-11-22 15:02:45] 2025-11-22 20:02:12,324 | INFO     | transexitcode: 0
[2025-11-22 15:02:45] 2025-11-22 20:02:12,324 | INFO     | exeerrorcode: 0
[2025-11-22 15:02:45] 2025-11-22 20:02:12,325 | INFO     | exeerrordiag: 
[2025-11-22 15:02:45] 2025-11-22 20:02:12,325 | INFO     | exitcode: 0
[2025-11-22 15:02:45] 2025-11-22 20:02:12,325 | INFO     | exitmsg: OK
[2025-11-22 15:02:45] 2025-11-22 20:02:12,325 | INFO     | cpuconsumptiontime: 295633 s
[2025-11-22 15:02:45] 2025-11-22 20:02:12,325 | INFO     | nevents: 1000
[2025-11-22 15:02:45] 2025-11-22 20:02:12,325 | INFO     | neventsw: 0
[2025-11-22 15:02:45] 2025-11-22 20:02:12,326 | INFO     | pid: 31733
[2025-11-22 15:02:45] 2025-11-22 20:02:12,326 | INFO     | pgrp: 31733
[2025-11-22 15:02:45] 2025-11-22 20:02:12,326 | INFO     | corecount: 12
[2025-11-22 15:02:45] 2025-11-22 20:02:12,326 | INFO     | event service: False
[2025-11-22 15:02:45] 2025-11-22 20:02:12,326 | INFO     | sizes: {0: 2298585, 1: 2298784, 6: 2299046, 11: 2299074, 25729: 2336311, 25733: 2345489, 25739: 2345679}
[2025-11-22 15:02:45] 2025-11-22 20:02:12,326 | INFO     | --------------------------------------------------
[2025-11-22 15:02:45] 2025-11-22 20:02:12,327 | INFO     | 
[2025-11-22 15:02:45] 2025-11-22 20:02:12,327 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 15:02:45] 2025-11-22 20:02:12,350 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,351 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,351 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,351 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,352 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,352 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,352 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,352 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,353 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,353 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,353 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,353 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,353 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,353 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 15:02:45] 2025-11-22 20:02:12,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,354 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 15:02:45] 2025-11-22 20:02:12,354 | INFO     | job 6894278658 has completed (purged errors)
[2025-11-22 15:02:45] 2025-11-22 20:02:12,354 | INFO     | overall cleanup function is called
[2025-11-22 15:02:45] 2025-11-22 20:02:13,367 | INFO     | --- collectZombieJob: --- 10, [31733]
[2025-11-22 15:02:45] 2025-11-22 20:02:13,367 | INFO     | zombie collector waiting for pid 31733
[2025-11-22 15:02:45] 2025-11-22 20:02:13,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 15:02:45] 2025-11-22 20:02:13,368 | INFO     | collected zombie processes
[2025-11-22 15:02:45] 2025-11-22 20:02:13,368 | INFO     | will attempt to kill all subprocesses of pid=31733
[2025-11-22 15:02:45] 2025-11-22 20:02:13,459 | INFO     | process IDs to be killed: [31733] (in reverse order)
[2025-11-22 15:02:45] 2025-11-22 20:02:13,510 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 15:02:45] 2025-11-22 20:02:13,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 15:02:45] 2025-11-22 20:02:13,513 | INFO     | did not find any defunct processes belonging to 31733
[2025-11-22 15:02:45] 2025-11-22 20:02:13,515 | INFO     | did not find any defunct processes belonging to 31733
[2025-11-22 15:02:45] 2025-11-22 20:02:13,517 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 15:02:45] 2025-11-22 20:02:13,517 | INFO     | ready for new job
[2025-11-22 15:02:45] 2025-11-22 20:02:13,518 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 15:02:45] 2025-11-22 20:02:13,519 | INFO     | ***************************************
[2025-11-22 15:02:45] 2025-11-22 20:02:13,520 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 15:02:45] 2025-11-22 20:02:13,520 | INFO     | ***************************************
[2025-11-22 15:02:45] 2025-11-22 20:02:13,520 | INFO     | 
[2025-11-22 15:02:45] 2025-11-22 20:02:13,520 | INFO     | architecture information:
[2025-11-22 15:02:45] 2025-11-22 20:02:13,521 | INFO     | executing command: cat /etc/os-release
[2025-11-22 15:02:45] 2025-11-22 20:02:13,538 | INFO     | cat /etc/os-release:
[2025-11-22 15:02:45] NAME="CentOS Linux"
[2025-11-22 15:02:45] VERSION="7 (Core)"
[2025-11-22 15:02:45] ID="centos"
[2025-11-22 15:02:45] ID_LIKE="rhel fedora"
[2025-11-22 15:02:45] VERSION_ID="7"
[2025-11-22 15:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 15:02:45] ANSI_COLOR="0;31"
[2025-11-22 15:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 15:02:45] HOME_URL="https://www.centos.org/"
[2025-11-22 15:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 15:02:45] 
[2025-11-22 15:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 15:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 15:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 15:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 15:02:45] 
[2025-11-22 15:02:45] 2025-11-22 20:02:13,538 | INFO     | ***************************************
[2025-11-22 15:02:45] 2025-11-22 20:02:14,041 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 15:02:45] 2025-11-22 20:02:14,059 | INFO     | sufficient remaining disk space (28250734592 B)
[2025-11-22 15:02:45] 2025-11-22 20:02:14,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 15:02:45] 2025-11-22 20:02:14,059 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 15:02:45] 2025-11-22 20:02:14,059 | INFO     | update_server=False
[2025-11-22 15:02:45] 2025-11-22 20:02:14,059 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 15:02:45] 2025-11-22 20:02:14,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 15:02:45] 2025-11-22 20:02:14,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 15:02:45] 2025-11-22 20:02:14,060 | INFO     | aborting loop
[2025-11-22 15:02:45] 2025-11-22 20:02:14,265 | INFO     | all data control threads have been joined
[2025-11-22 15:02:45] 2025-11-22 20:02:14,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 15:02:45] 2025-11-22 20:02:15,065 | INFO     | [job] retrieve thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:15,066 | INFO     | [job] queue monitor thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:15,066 | INFO     | [job] job monitor thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:15,249 | INFO     | [data] copytool_in thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:15,271 | INFO     | [data] control thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:15,355 | INFO     | [payload] failed_post thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:15,426 | INFO     | all payload control threads have been joined
[2025-11-22 15:02:45] 2025-11-22 20:02:15,455 | INFO     | all job control threads have been joined
[2025-11-22 15:02:45] 2025-11-22 20:02:15,749 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:15,818 | INFO     | [job] validate thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:15,982 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:16,304 | INFO     | [data] copytool_out thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:16,432 | INFO     | [payload] control thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:16,460 | INFO     | [job] control thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:16,467 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:16,660 | INFO     | [payload] validate_post thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:16,874 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 15:02:45] 2025-11-22 20:02:20,880 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:24,480 | INFO     | job.realtimelogging is not enabled
[2025-11-22 15:02:45] 2025-11-22 20:02:25,486 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 15:02:45] 2025-11-22 20:02:39,653 | INFO     | [monitor] cgroup control has ended
[2025-11-22 15:02:45] 2025-11-22 20:02:39,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140598378760000)>', '<ExcThread(monitor, started 140597432153856)>']
[2025-11-22 15:02:45] 2025-11-22 20:02:43,832 | INFO     | PID=25322 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 15:02:45] 2025-11-22 20:02:43,832 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 15:02:45] 2025-11-22 20:02:43,832 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 15:02:45] 2025-11-22 20:02:43,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 15:02:45] 2025-11-22 20:02:43,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 15:02:45] 2025-11-22 20:02:43,833 | INFO     | [monitor] control thread has ended
[2025-11-22 15:02:45] 2025-11-22 20:02:44,767 | INFO     | all workflow threads have been joined
[2025-11-22 15:02:45] 2025-11-22 20:02:44,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 15:02:45] 2025-11-22 20:02:44,776 | INFO     | traces error code: 0
[2025-11-22 15:02:45] 2025-11-22 20:02:44,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 15:02:45] 2025-11-22 20:02:44,862 [wrapper] ==== pilot stdout END ====
[2025-11-22 15:02:45] 2025-11-22 20:02:44,866 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 15:02:45] 2025-11-22 20:02:44,869 [wrapper] pilotpid: 25322
[2025-11-22 15:02:45] 2025-11-22 20:02:44,873 [wrapper] Pilot exit status: 0
[2025-11-22 15:02:45] 2025-11-22 20:02:44,887 [wrapper] pandaids: 6894278658
[2025-11-22 15:02:45] 2025-11-22 20:02:44,928 [wrapper] cleanup supervisor_pilot 27151 25323
[2025-11-22 15:02:45] 2025-11-22 20:02:44,932 [wrapper] Test setup, not cleaning
[2025-11-22 15:02:45] 2025-11-22 20:02:44,936 [wrapper] apfmon messages muted
[2025-11-22 15:02:45] 2025-11-22 20:02:44,939 [wrapper] ==== wrapper stdout END ====
[2025-11-22 15:02:45] 2025-11-22 20:02:44,943 [wrapper] ==== wrapper stderr END ====
[2025-11-22 15:02:45]  *** Error codes and diagnostics ***
[2025-11-22 15:02:45]     "exeErrorCode": 0,
[2025-11-22 15:02:45]     "exeErrorDiag": "",
[2025-11-22 15:02:45]     "pilotErrorCode": 0,
[2025-11-22 15:02:45]     "pilotErrorDiag": "",
[2025-11-22 15:02:45]  *** Listing of results directory ***
[2025-11-22 15:02:45] total 1310800
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 03:27 pilot3.tar.gz
[2025-11-22 15:02:45] -rwx------ 1 boincer umatlas     36292 Nov 21 03:42 runpilot2-wrapper.sh
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 03:42 queuedata.json
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas       100 Nov 22 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 15:02:45] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 07:52 run_atlas
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas       105 Nov 22 07:52 job.xml
[2025-11-22 15:02:45] -rw-r--r-- 2 boincer umatlas 410792864 Nov 22 07:52 EVNT.47493127._002326.pool.root.1
[2025-11-22 15:02:45] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 07:52 input.tar.gz
[2025-11-22 15:02:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 07:52 start_atlas.sh
[2025-11-22 15:02:45] drwxrwx--x 2 boincer umatlas      4096 Nov 22 07:52 shared
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas         0 Nov 22 07:52 boinc_lockfile
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 07:52 pandaJob.out
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas        57 Nov 22 07:52 setup.sh.local
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas    989768 Nov 22 07:52 agis_schedconf.cvmfs.json
[2025-11-22 15:02:45] drwx------ 5 boincer umatlas      4096 Nov 22 07:52 pilot3
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas       533 Nov 22 14:52 boinc_task_state.xml
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas      5955 Nov 22 15:01 init_data.xml
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas 915948640 Nov 22 15:01 HITS.47533967._002978.pool.root.1
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas      1065 Nov 22 15:01 memory_monitor_summary.json
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas   1526164 Nov 22 15:02 agis_ddmendpoints.agis.ALL.json
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas        95 Nov 22 15:02 pilot_heartbeat.json
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas   2190340 Nov 22 15:02 log.47533967._002978.job.log.tgz.1
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas      8667 Nov 22 15:02 heartbeat.json
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 15:02 boinc_mmap_file
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas        29 Nov 22 15:02 wrapper_checkpoint.txt
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas      4818 Nov 22 15:02 pilotlog.txt
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas   3603231 Nov 22 15:02 log.47533967._002978.job.log.1
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas       353 Nov 22 15:02 output.list
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas       620 Nov 22 15:02 runtime_log
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas   5816320 Nov 22 15:02 result.tar.gz
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 15:02 runtime_log.err
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas       670 Nov 22 15:02 9bxMDm8tbg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXDJKDmt9qDJm.diag
[2025-11-22 15:02:45] -rw-r--r-- 1 boincer umatlas     21297 Nov 22 15:02 stderr.txt
[2025-11-22 15:02:45] HITS file was successfully produced:
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas 915948640 Nov 22 15:01 shared/HITS.pool.root.1
[2025-11-22 15:02:45]  *** Contents of shared directory: ***
[2025-11-22 15:02:45] total 1301936
[2025-11-22 15:02:45] -rw-r--r-- 2 boincer umatlas 410792864 Nov 22 07:52 ATLAS.root_0
[2025-11-22 15:02:45] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 07:52 input.tar.gz
[2025-11-22 15:02:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 07:52 start_atlas.sh
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas 915948640 Nov 22 15:01 HITS.pool.root.1
[2025-11-22 15:02:45] -rw------- 1 boincer umatlas   5816320 Nov 22 15:02 result.tar.gz
15:02:46 (21638): run_atlas exited; CPU time 288787.287187
15:02:46 (21638): called boinc_finish(0)

</stderr_txt>
]]>

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