Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:25:13 (1276298): wrapper (7.7.26015): starting
18:25:13 (1276298): wrapper: running run_atlas (--nthreads 3)
[2025-11-22 18:25:13] Arguments: --nthreads 3
[2025-11-22 18:25:13] Threads: 3
[2025-11-22 18:25:13] Checking for CVMFS
[2025-11-22 18:25:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 18:25:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 18:25:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 18:25:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 18:25:13] 2.9.2.0 1027257 294 64588 153180 2 128 34718897 36864000 0 130560 0 726293 99.997 13174 13852 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-22 18:25:13] CVMFS is ok
[2025-11-22 18:25:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 18:25:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 18:25:13] Further information can be found at the LHC@home message board.
[2025-11-22 18:25:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 18:25:13] Checking for apptainer binary...
[2025-11-22 18:25:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 18:25:13] Running /usr/bin/apptainer --version
[2025-11-22 18:25:13] apptainer version 1.4.1-1.1
[2025-11-22 18:25:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 18:25:14] thA335
[2025-11-22 18:25:14] apptainer works
[2025-11-22 18:25:14] Set ATHENA_PROC_NUMBER=3
[2025-11-22 18:25:14] Set ATHENA_CORE_NUMBER=3
[2025-11-22 18:25:14] Starting ATLAS job with PandaID=6895326364
[2025-11-22 18:25:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 18:29:32]  *** The last 200 lines of the pilot log: ***
[2025-11-22 18:29:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 18:29:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 18:29:32] 
[2025-11-22 18:29:32] 2025-11-22 17:28:39,602 | INFO     | ***************************************
[2025-11-22 18:29:32] 2025-11-22 17:28:40,106 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-22 18:29:32] 2025-11-22 17:28:40,120 | INFO     | sufficient remaining disk space (826617626624 B)
[2025-11-22 18:29:32] 2025-11-22 17:28:40,120 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 18:29:32] 2025-11-22 17:28:40,120 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 18:29:32] 2025-11-22 17:28:40,120 | INFO     | update_server=False
[2025-11-22 18:29:32] 2025-11-22 17:28:40,120 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 18:29:32] 2025-11-22 17:28:40,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:29:32] 2025-11-22 17:28:40,120 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 18:29:32] 2025-11-22 17:28:40,120 | INFO     | aborting loop
[2025-11-22 18:29:32] 2025-11-22 17:28:40,128 | INFO     | all data control threads have been joined
[2025-11-22 18:29:32] 2025-11-22 17:28:40,415 | INFO     | all job control threads have been joined
[2025-11-22 18:29:32] 2025-11-22 17:28:40,799 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 18:29:32] 2025-11-22 17:28:41,126 | INFO     | [job] retrieve thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:41,127 | INFO     | [job] queue monitor thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:41,127 | INFO     | [job] job monitor thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:41,134 | INFO     | [data] control thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:41,151 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:41,355 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:41,421 | INFO     | [job] control thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:41,530 | INFO     | all payload control threads have been joined
[2025-11-22 18:29:32] 2025-11-22 17:28:41,541 | INFO     | [data] copytool_in thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:41,645 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:42,159 | INFO     | [payload] validate_post thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:42,527 | INFO     | [job] validate thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:42,536 | INFO     | [payload] control thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:42,586 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:42,692 | INFO     | [payload] failed_post thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:42,805 | INFO     | [data] copytool_out thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:28:43,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 18:29:32] 2025-11-22 17:28:47,219 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 18:29:32] 2025-11-22 17:29:10,602 | INFO     | PID=1280041 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 18:29:32] 2025-11-22 17:29:10,602 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 18:29:32] 2025-11-22 17:29:10,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 18:29:32] 2025-11-22 17:29:10,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 18:29:32] 2025-11-22 17:29:25,848 | INFO     | [monitor] cgroup control has ended
[2025-11-22 18:29:32] 2025-11-22 17:29:26,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629388318528)>', '<ExcThread(monitor, started 140628730029824)>']
[2025-11-22 18:29:32] 2025-11-22 17:29:27,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 18:29:32] 2025-11-22 17:29:27,693 | INFO     | [monitor] control thread has ended
[2025-11-22 18:29:32] 2025-11-22 17:29:31,912 | INFO     | all workflow threads have been joined
[2025-11-22 18:29:32] 2025-11-22 17:29:31,912 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 18:29:32] 2025-11-22 17:29:31,913 | INFO     | traces error code: 0
[2025-11-22 18:29:32] 2025-11-22 17:29:31,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 18:29:32] 2025-11-22 17:29:31,959 [wrapper] ==== pilot stdout END ====
[2025-11-22 18:29:32] 2025-11-22 17:29:31,962 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 18:29:32] 2025-11-22 17:29:31,965 [wrapper] pilotpid: 1280041
[2025-11-22 18:29:32] 2025-11-22 17:29:31,968 [wrapper] Pilot exit status: 0
[2025-11-22 18:29:32] 2025-11-22 17:29:31,976 [wrapper] pandaids: 6895326364
[2025-11-22 18:29:32] 2025-11-22 17:29:31,992 [wrapper] cleanup supervisor_pilot 1280047 1280042
[2025-11-22 18:29:32] 2025-11-22 17:29:31,995 [wrapper] Test setup, not cleaning
[2025-11-22 18:29:32] 2025-11-22 17:29:31,998 [wrapper] apfmon messages muted
[2025-11-22 18:29:32] 2025-11-22 17:29:32,001 [wrapper] ==== wrapper stdout END ====
[2025-11-22 18:29:32] 2025-11-22 17:29:32,003 [wrapper] ==== wrapper stderr END ====
[2025-11-22 18:29:32]  *** Error codes and diagnostics ***
[2025-11-22 18:29:32]     "exeErrorCode": 65,
[2025-11-22 18:29:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-22 18:29:32]     "pilotErrorCode": 1305,
[2025-11-22 18:29:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-22 18:29:32]  *** Listing of results directory ***
[2025-11-22 18:29:32] total 404952
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc    576529 Nov 21 16:23 pilot3.tar.gz
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc      5112 Nov 21 16:27 queuedata.json
[2025-11-22 18:29:32] -rwx------ 1 boinc boinc     36292 Nov 21 16:28 runpilot2-wrapper.sh
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc       100 Nov 22 18:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 18:29:32] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 18:25 run_atlas
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc       105 Nov 22 18:25 job.xml
[2025-11-22 18:29:32] -rw-r--r-- 2 boinc boinc 410466273 Nov 22 18:25 EVNT.47483658._001022.pool.root.1
[2025-11-22 18:29:32] -rw-r--r-- 2 boinc boinc    590096 Nov 22 18:25 input.tar.gz
[2025-11-22 18:29:32] -rw-r--r-- 2 boinc boinc     15847 Nov 22 18:25 start_atlas.sh
[2025-11-22 18:29:32] drwxrwx--x 2 boinc boinc      4096 Nov 22 18:25 shared
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc         0 Nov 22 18:25 boinc_setup_complete
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc      6194 Nov 22 18:25 init_data.xml
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc         0 Nov 22 18:25 boinc_lockfile
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc      2783 Nov 22 18:25 pandaJob.out
[2025-11-22 18:29:32] -rw------- 1 boinc boinc    989776 Nov 22 18:25 agis_schedconf.cvmfs.json
[2025-11-22 18:29:32] -rw------- 1 boinc boinc   1526164 Nov 22 18:25 agis_ddmendpoints.agis.ALL.json
[2025-11-22 18:29:32] drwx------ 5 boinc boinc      4096 Nov 22 18:25 pilot3
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc       522 Nov 22 18:26 boinc_task_state.xml
[2025-11-22 18:29:32] -rw------- 1 boinc boinc       958 Nov 22 18:26 memory_monitor_summary.json
[2025-11-22 18:29:32] -rw------- 1 boinc boinc     55944 Nov 22 18:26 log.47556149._000090.job.log.tgz.1
[2025-11-22 18:29:32] -rw------- 1 boinc boinc        95 Nov 22 18:28 pilot_heartbeat.json
[2025-11-22 18:29:32] -rw------- 1 boinc boinc      8412 Nov 22 18:28 heartbeat.json
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc      8192 Nov 22 18:29 boinc_mmap_file
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc        22 Nov 22 18:29 wrapper_checkpoint.txt
[2025-11-22 18:29:32] -rw------- 1 boinc boinc      4752 Nov 22 18:29 pilotlog.txt
[2025-11-22 18:29:32] -rw------- 1 boinc boinc     93235 Nov 22 18:29 log.47556149._000090.job.log.1
[2025-11-22 18:29:32] -rw------- 1 boinc boinc       186 Nov 22 18:29 output.list
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc       620 Nov 22 18:29 runtime_log
[2025-11-22 18:29:32] -rw------- 1 boinc boinc    174080 Nov 22 18:29 result.tar.gz
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc      8744 Nov 22 18:29 runtime_log.err
[2025-11-22 18:29:32] -rw------- 1 boinc boinc       649 Nov 22 18:29 43pLDm3Eig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwVJKDmf38eTm.diag
[2025-11-22 18:29:32] -rw-r--r-- 1 boinc boinc      8471 Nov 22 18:29 stderr.txt
[2025-11-22 18:29:32] No HITS result produced
[2025-11-22 18:29:32]  *** Contents of shared directory: ***
[2025-11-22 18:29:32] total 401620
[2025-11-22 18:29:32] -rw-r--r-- 2 boinc boinc 410466273 Nov 22 18:25 ATLAS.root_0
[2025-11-22 18:29:32] -rw-r--r-- 2 boinc boinc    590096 Nov 22 18:25 input.tar.gz
[2025-11-22 18:29:32] -rw-r--r-- 2 boinc boinc     15847 Nov 22 18:25 start_atlas.sh
[2025-11-22 18:29:32] -rw------- 1 boinc boinc    174080 Nov 22 18:29 result.tar.gz
18:29:33 (1276298): run_atlas exited; CPU time 31.472494
18:29:33 (1276298): called boinc_finish(0)

</stderr_txt>
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