Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:44:24 (12887): wrapper (7.7.26015): starting
07:44:24 (12887): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 07:44:24] Arguments: --nthreads 8
[2025-11-22 07:44:24] Threads: 8
[2025-11-22 07:44:24] Checking for CVMFS
[2025-11-22 07:44:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 07:44:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 07:44:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 07:44:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 07:44:24] 2.11.2.0 2893 59970 85020 153172 0 81 11850330 20275200 1 130560 0 15324471 99.799 4119280 29902 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 07:44:24] CVMFS is ok
[2025-11-22 07:44:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 07:44:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 07:44:24] Further information can be found at the LHC@home message board.
[2025-11-22 07:44:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 07:44:24] Checking for apptainer binary...
[2025-11-22 07:44:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 07:44:24] Running /usr/bin/apptainer --version
[2025-11-22 07:44:24] apptainer version 1.3.2-1.el7
[2025-11-22 07:44:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 07:44:26] c-204-22.aglt2.org
[2025-11-22 07:44:26] apptainer works
[2025-11-22 07:44:26] Set ATHENA_PROC_NUMBER=8
[2025-11-22 07:44:26] Set ATHENA_CORE_NUMBER=8
[2025-11-22 07:44:26] Starting ATLAS job with PandaID=6893875872
[2025-11-22 07:44:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 20:28:29]  *** The last 200 lines of the pilot log: ***
[2025-11-22 20:28:29] 2025-11-23 01:27:53,879 | INFO     | time since job start (45789s) is within the limit (172800.0s)
[2025-11-22 20:28:29] 2025-11-23 01:27:54,423 | INFO     | monitor loop #3379: job 0:6893875872 is in state 'finished'
[2025-11-22 20:28:29] 2025-11-23 01:27:54,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 20:28:29] 2025-11-23 01:27:55,885 | INFO     | time since job start (45791s) is within the limit (172800.0s)
[2025-11-22 20:28:29] 2025-11-23 01:27:56,130 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 20:28:29] 2025-11-23 01:27:56,133 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-22 20:28:29] 2025-11-23 01:27:56,136 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893875872/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 20:28:29] 2025-11-23 01:27:56,137 | INFO     | extracted standard info from prmon json
[2025-11-22 20:28:29] 2025-11-23 01:27:56,137 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 20:28:29] 2025-11-23 01:27:56,137 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 20:28:29] 2025-11-23 01:27:56,152 | INFO     | fitting pss+swap vs Time
[2025-11-22 20:28:29] 2025-11-23 01:27:56,153 | INFO     | sum of square deviations: 130816906973.87808
[2025-11-22 20:28:29] 2025-11-23 01:27:56,164 | INFO     | sum of deviations: 899608483291.0067
[2025-11-22 20:28:29] 2025-11-23 01:27:56,165 | INFO     | mean x: 1763838361.0386667
[2025-11-22 20:28:29] 2025-11-23 01:27:56,165 | INFO     | mean y: 2897590.2066666665
[2025-11-22 20:28:29] 2025-11-23 01:27:56,165 | INFO     | intersect: -12126757432.60579
[2025-11-22 20:28:29] 2025-11-23 01:27:56,166 | INFO     | chi2: 5.2377284330091385
[2025-11-22 20:28:29] 2025-11-23 01:27:56,167 | INFO     | sum of square deviations: 128218107044.91801
[2025-11-22 20:28:29] 2025-11-23 01:27:56,178 | INFO     | sum of deviations: 1129716400797.114
[2025-11-22 20:28:29] 2025-11-23 01:27:56,178 | INFO     | mean x: 1763838208.5422819
[2025-11-22 20:28:29] 2025-11-23 01:27:56,179 | INFO     | mean y: 2911087.932885906
[2025-11-22 20:28:29] 2025-11-23 01:27:56,179 | INFO     | intersect: -15538083850.049978
[2025-11-22 20:28:29] 2025-11-23 01:27:56,180 | INFO     | chi2: 2.5458632739058573
[2025-11-22 20:28:29] 2025-11-23 01:27:56,180 | INFO     | current chi2=2.5458632739058573 (change=51.393751958170384 %)
[2025-11-22 20:28:29] 2025-11-23 01:27:56,181 | INFO     | sum of square deviations: 125653958928.43805
[2025-11-22 20:28:29] 2025-11-23 01:27:56,192 | INFO     | sum of deviations: 1168474644663.2654
[2025-11-22 20:28:29] 2025-11-23 01:27:56,192 | INFO     | mean x: 1763838056.045946
[2025-11-22 20:28:29] 2025-11-23 01:27:56,192 | INFO     | mean y: 2913381.0216216217
[2025-11-22 20:28:29] 2025-11-23 01:27:56,192 | INFO     | intersect: -16399276119.07685
[2025-11-22 20:28:29] 2025-11-23 01:27:56,193 | INFO     | chi2: 2.275031060014985
[2025-11-22 20:28:29] 2025-11-23 01:27:56,193 | INFO     | current chi2=2.275031060014985 (change=10.638128789821552 %)
[2025-11-22 20:28:29] 2025-11-23 01:27:56,193 | INFO     | right removable region: 739
[2025-11-22 20:28:29] 2025-11-23 01:27:56,194 | INFO     | sum of square deviations: 128217860604.91806
[2025-11-22 20:28:29] 2025-11-23 01:27:56,206 | INFO     | sum of deviations: 697822723780.2198
[2025-11-22 20:28:29] 2025-11-23 01:27:56,206 | INFO     | mean x: 1763838513.5422819
[2025-11-22 20:28:29] 2025-11-23 01:27:56,206 | INFO     | mean y: 2909411.2469798657
[2025-11-22 20:28:29] 2025-11-23 01:27:56,206 | INFO     | intersect: -9596740668.870779
[2025-11-22 20:28:29] 2025-11-23 01:27:56,207 | INFO     | chi2: 3.121248713148237
[2025-11-22 20:28:29] 2025-11-23 01:27:56,207 | INFO     | current chi2=3.121248713148237 (change=40.40835157703964 %)
[2025-11-22 20:28:29] 2025-11-23 01:27:56,208 | INFO     | sum of square deviations: 125653511371.52834
[2025-11-22 20:28:29] 2025-11-23 01:27:56,219 | INFO     | sum of deviations: 653158155041.7562
[2025-11-22 20:28:29] 2025-11-23 01:27:56,219 | INFO     | mean x: 1763838666.0445945
[2025-11-22 20:28:29] 2025-11-23 01:27:56,220 | INFO     | mean y: 2912066.189189189
[2025-11-22 20:28:29] 2025-11-23 01:27:56,220 | INFO     | intersect: -9165678579.070286
[2025-11-22 20:28:29] 2025-11-23 01:27:56,221 | INFO     | chi2: 3.079420939277594
[2025-11-22 20:28:29] 2025-11-23 01:27:56,221 | INFO     | current chi2=3.079420939277594 (change=1.3400974326218718 %)
[2025-11-22 20:28:29] 2025-11-23 01:27:56,221 | INFO     | left removable region: 20
[2025-11-22 20:28:29] 2025-11-23 01:27:56,222 | INFO     | sum of square deviations: 115256834357.57957
[2025-11-22 20:28:29] 2025-11-23 01:27:56,232 | INFO     | sum of deviations: 865409468675.3088
[2025-11-22 20:28:29] 2025-11-23 01:27:56,232 | INFO     | mean x: 1763838635.5549374
[2025-11-22 20:28:29] 2025-11-23 01:27:56,233 | INFO     | mean y: 2931474.9415855356
[2025-11-22 20:28:29] 2025-11-23 01:27:56,233 | INFO     | intersect: -13240904909.535666
[2025-11-22 20:28:29] 2025-11-23 01:27:56,234 | INFO     | chi2: 0.08975048249581666
[2025-11-22 20:28:29] 2025-11-23 01:27:56,234 | INFO     | current memory leak: 7.51 B/s (using 719 data points, chi2=0.09)
[2025-11-22 20:28:29] 2025-11-23 01:27:56,234 | INFO     | could have reported an average CPU frequency of 2162 MHz (29 samples)
[2025-11-22 20:28:29] 2025-11-23 01:27:56,235 | INFO     | ..............................
[2025-11-22 20:28:29] 2025-11-23 01:27:56,235 | INFO     | . Timing measurements:
[2025-11-22 20:28:29] 2025-11-23 01:27:56,235 | INFO     | . get job = 0 s
[2025-11-22 20:28:29] 2025-11-23 01:27:56,235 | INFO     | . initial setup = 2 s
[2025-11-22 20:28:29] 2025-11-23 01:27:56,235 | INFO     | . payload setup = 9 s
[2025-11-22 20:28:29] 2025-11-23 01:27:56,235 | INFO     | . stage-in = 0 s
[2025-11-22 20:28:29] 2025-11-23 01:27:56,235 | INFO     | . payload execution = 45746 s
[2025-11-22 20:28:29] 2025-11-23 01:27:56,235 | INFO     | . stage-out = 3 s
[2025-11-22 20:28:29] 2025-11-23 01:27:56,235 | INFO     | . log creation = 0 s
[2025-11-22 20:28:29] 2025-11-23 01:27:56,236 | INFO     | ..............................
[2025-11-22 20:28:29] 2025-11-23 01:27:56,781 | INFO     | 
[2025-11-22 20:28:29] 2025-11-23 01:27:56,781 | INFO     | job summary report
[2025-11-22 20:28:29] 2025-11-23 01:27:56,781 | INFO     | --------------------------------------------------
[2025-11-22 20:28:29] 2025-11-23 01:27:56,782 | INFO     | PanDA job id: 6893875872
[2025-11-22 20:28:29] 2025-11-23 01:27:56,782 | INFO     | task id: 47523449
[2025-11-22 20:28:29] 2025-11-23 01:27:56,782 | INFO     | errors: (none)
[2025-11-22 20:28:29] 2025-11-23 01:27:56,782 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 20:28:29] 2025-11-23 01:27:56,782 | INFO     | pilot state: finished 
[2025-11-22 20:28:29] 2025-11-23 01:27:56,782 | INFO     | transexitcode: 0
[2025-11-22 20:28:29] 2025-11-23 01:27:56,783 | INFO     | exeerrorcode: 0
[2025-11-22 20:28:29] 2025-11-23 01:27:56,783 | INFO     | exeerrordiag: 
[2025-11-22 20:28:29] 2025-11-23 01:27:56,783 | INFO     | exitcode: 0
[2025-11-22 20:28:29] 2025-11-23 01:27:56,783 | INFO     | exitmsg: OK
[2025-11-22 20:28:29] 2025-11-23 01:27:56,783 | INFO     | cpuconsumptiontime: 354520 s
[2025-11-22 20:28:29] 2025-11-23 01:27:56,783 | INFO     | nevents: 1000
[2025-11-22 20:28:29] 2025-11-23 01:27:56,783 | INFO     | neventsw: 0
[2025-11-22 20:28:29] 2025-11-23 01:27:56,784 | INFO     | pid: 23104
[2025-11-22 20:28:29] 2025-11-23 01:27:56,784 | INFO     | pgrp: 23104
[2025-11-22 20:28:29] 2025-11-23 01:27:56,784 | INFO     | corecount: 8
[2025-11-22 20:28:29] 2025-11-23 01:27:56,784 | INFO     | event service: False
[2025-11-22 20:28:29] 2025-11-23 01:27:56,784 | INFO     | sizes: {0: 2297928, 1: 2298784, 7: 2299046, 12: 2299074, 45760: 2345332, 45764: 2354326, 45766: 2354510, 45775: 2354756}
[2025-11-22 20:28:29] 2025-11-23 01:27:56,784 | INFO     | --------------------------------------------------
[2025-11-22 20:28:29] 2025-11-23 01:27:56,784 | INFO     | 
[2025-11-22 20:28:29] 2025-11-23 01:27:56,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 20:28:29] 2025-11-23 01:27:56,812 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,813 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,813 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,813 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,816 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 20:28:29] 2025-11-23 01:27:56,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 20:28:29] 2025-11-23 01:27:56,816 | INFO     | job 6893875872 has completed (purged errors)
[2025-11-22 20:28:29] 2025-11-23 01:27:56,816 | INFO     | overall cleanup function is called
[2025-11-22 20:28:29] 2025-11-23 01:27:57,832 | INFO     | --- collectZombieJob: --- 10, [23104]
[2025-11-22 20:28:29] 2025-11-23 01:27:57,833 | INFO     | zombie collector waiting for pid 23104
[2025-11-22 20:28:29] 2025-11-23 01:27:57,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 20:28:29] 2025-11-23 01:27:57,833 | INFO     | collected zombie processes
[2025-11-22 20:28:29] 2025-11-23 01:27:57,833 | INFO     | will attempt to kill all subprocesses of pid=23104
[2025-11-22 20:28:29] 2025-11-23 01:27:57,923 | INFO     | process IDs to be killed: [23104] (in reverse order)
[2025-11-22 20:28:29] 2025-11-23 01:27:57,985 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 20:28:29] 2025-11-23 01:27:57,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 20:28:29] 2025-11-23 01:27:57,989 | INFO     | did not find any defunct processes belonging to 23104
[2025-11-22 20:28:29] 2025-11-23 01:27:57,992 | INFO     | did not find any defunct processes belonging to 23104
[2025-11-22 20:28:29] 2025-11-23 01:27:57,995 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 20:28:29] 2025-11-23 01:27:57,995 | INFO     | ready for new job
[2025-11-22 20:28:29] 2025-11-23 01:27:57,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 20:28:29] 2025-11-23 01:27:57,999 | INFO     | ***************************************
[2025-11-22 20:28:29] 2025-11-23 01:27:58,000 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 20:28:29] 2025-11-23 01:27:58,000 | INFO     | ***************************************
[2025-11-22 20:28:29] 2025-11-23 01:27:58,000 | INFO     | 
[2025-11-22 20:28:29] 2025-11-23 01:27:58,000 | INFO     | architecture information:
[2025-11-22 20:28:29] 2025-11-23 01:27:58,001 | INFO     | executing command: cat /etc/os-release
[2025-11-22 20:28:29] 2025-11-23 01:27:58,020 | INFO     | cat /etc/os-release:
[2025-11-22 20:28:29] NAME="CentOS Linux"
[2025-11-22 20:28:29] VERSION="7 (Core)"
[2025-11-22 20:28:29] ID="centos"
[2025-11-22 20:28:29] ID_LIKE="rhel fedora"
[2025-11-22 20:28:29] VERSION_ID="7"
[2025-11-22 20:28:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 20:28:29] ANSI_COLOR="0;31"
[2025-11-22 20:28:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 20:28:29] HOME_URL="https://www.centos.org/"
[2025-11-22 20:28:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 20:28:29] 
[2025-11-22 20:28:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 20:28:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 20:28:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 20:28:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 20:28:29] 
[2025-11-22 20:28:29] 2025-11-23 01:27:58,020 | INFO     | ***************************************
[2025-11-22 20:28:29] 2025-11-23 01:27:58,524 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 20:28:29] 2025-11-23 01:27:58,545 | INFO     | sufficient remaining disk space (17421041664 B)
[2025-11-22 20:28:29] 2025-11-23 01:27:58,546 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 20:28:29] 2025-11-23 01:27:58,546 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 20:28:29] 2025-11-23 01:27:58,546 | INFO     | update_server=False
[2025-11-22 20:28:29] 2025-11-23 01:27:58,547 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 20:28:29] 2025-11-23 01:27:58,547 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:28:29] 2025-11-23 01:27:58,547 | INFO     | aborting loop
[2025-11-22 20:28:29] 2025-11-23 01:27:58,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 20:28:29] 2025-11-23 01:27:58,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 20:28:29] 2025-11-23 01:27:58,657 | INFO     | all data control threads have been joined
[2025-11-22 20:28:29] 2025-11-23 01:27:59,185 | INFO     | all job control threads have been joined
[2025-11-22 20:28:29] 2025-11-23 01:27:59,273 | INFO     | all payload control threads have been joined
[2025-11-22 20:28:29] 2025-11-23 01:27:59,552 | INFO     | [job] retrieve thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:27:59,553 | INFO     | [job] job monitor thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:27:59,608 | INFO     | [payload] failed_post thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:27:59,662 | INFO     | [data] control thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:27:59,786 | INFO     | [monitor] cgroup control has ended
[2025-11-22 20:28:29] 2025-11-23 01:27:59,808 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:00,190 | INFO     | [job] control thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:00,279 | INFO     | [payload] control thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:00,340 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:00,553 | INFO     | [data] copytool_out thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:00,953 | INFO     | [data] copytool_in thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:00,954 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:00,955 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:01,048 | INFO     | [job] validate thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:01,078 | INFO     | [payload] validate_post thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:01,340 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 20:28:29] 2025-11-23 01:28:02,346 | INFO     | [job] queue monitor thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:02,554 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 20:28:29] 2025-11-23 01:28:02,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700839085888)>', '<ExcThread(monitor, started 139700153071360)>']
[2025-11-22 20:28:29] 2025-11-23 01:28:07,672 | INFO     | all workflow threads have been joined
[2025-11-22 20:28:29] 2025-11-23 01:28:07,673 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 20:28:29] 2025-11-23 01:28:07,674 | INFO     | traces error code: 0
[2025-11-22 20:28:29] 2025-11-23 01:28:07,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 20:28:29] 2025-11-23 01:28:29,011 | INFO     | PID=16577 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 20:28:29] 2025-11-23 01:28:29,019 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 20:28:29] 2025-11-23 01:28:29,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 20:28:29] 2025-11-23 01:28:29,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 20:28:29] 2025-11-23 01:28:29,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 20:28:29] 2025-11-23 01:28:29,020 | INFO     | [monitor] control thread has ended
[2025-11-22 20:28:29] 2025-11-23 01:28:29,134 [wrapper] ==== pilot stdout END ====
[2025-11-22 20:28:29] 2025-11-23 01:28:29,139 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 20:28:29] 2025-11-23 01:28:29,144 [wrapper] pilotpid: 16577
[2025-11-22 20:28:29] 2025-11-23 01:28:29,149 [wrapper] Pilot exit status: 0
[2025-11-22 20:28:29] 2025-11-23 01:28:29,166 [wrapper] pandaids: 6893875872
[2025-11-22 20:28:29] 2025-11-23 01:28:29,207 [wrapper] cleanup supervisor_pilot 15839 16578
[2025-11-22 20:28:29] 2025-11-23 01:28:29,212 [wrapper] Test setup, not cleaning
[2025-11-22 20:28:29] 2025-11-23 01:28:29,216 [wrapper] apfmon messages muted
[2025-11-22 20:28:29] 2025-11-23 01:28:29,221 [wrapper] ==== wrapper stdout END ====
[2025-11-22 20:28:29] 2025-11-23 01:28:29,226 [wrapper] ==== wrapper stderr END ====
[2025-11-22 20:28:29]  *** Error codes and diagnostics ***
[2025-11-22 20:28:29]     "exeErrorCode": 0,
[2025-11-22 20:28:29]     "exeErrorDiag": "",
[2025-11-22 20:28:29]     "pilotErrorCode": 0,
[2025-11-22 20:28:29]     "pilotErrorDiag": "",
[2025-11-22 20:28:29]  *** Listing of results directory ***
[2025-11-22 20:28:29] total 1330684
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 11:47 queuedata.json
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 11:47 pilot3.tar.gz
[2025-11-22 20:28:29] -rwx------ 1 boincer umatlas     36292 Nov 20 11:48 runpilot2-wrapper.sh
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas       100 Nov 22 07:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 20:28:29] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 07:44 run_atlas
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas       105 Nov 22 07:44 job.xml
[2025-11-22 20:28:29] -rw-r--r-- 2 boincer umatlas 410209500 Nov 22 07:44 EVNT.47493127._000746.pool.root.1
[2025-11-22 20:28:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 07:44 start_atlas.sh
[2025-11-22 20:28:29] drwxrwx--x 2 boincer umatlas      4096 Nov 22 07:44 shared
[2025-11-22 20:28:29] -rw-r--r-- 2 boincer umatlas    590102 Nov 22 07:44 input.tar.gz
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas         0 Nov 22 07:44 boinc_lockfile
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 07:44 pandaJob.out
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas        57 Nov 22 07:44 setup.sh.local
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas    989768 Nov 22 07:44 agis_schedconf.cvmfs.json
[2025-11-22 20:28:29] drwx------ 5 boincer umatlas      4096 Nov 22 07:44 pilot3
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas       532 Nov 22 20:18 boinc_task_state.xml
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas 931864261 Nov 22 20:27 HITS.47523449._007454.pool.root.1
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas      1062 Nov 22 20:27 memory_monitor_summary.json
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas      5912 Nov 22 20:27 init_data.xml
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas   1526164 Nov 22 20:27 agis_ddmendpoints.agis.ALL.json
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas   2002581 Nov 22 20:27 log.47523449._007454.job.log.tgz.1
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas      8660 Nov 22 20:27 heartbeat.json
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 20:28 boinc_mmap_file
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas        29 Nov 22 20:28 wrapper_checkpoint.txt
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas        95 Nov 22 20:28 pilot_heartbeat.json
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas       745 Nov 22 20:28 pilotlog.txt
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas   6312551 Nov 22 20:28 log.47523449._007454.job.log.1
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas       353 Nov 22 20:28 output.list
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas       620 Nov 22 20:28 runtime_log
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas   8335360 Nov 22 20:28 result.tar.gz
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 20:28 runtime_log.err
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas       668 Nov 22 20:28 6FJMDmr0Mg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHKIKDm4yLbPo.diag
[2025-11-22 20:28:29] -rw-r--r-- 1 boincer umatlas     21317 Nov 22 20:28 stderr.txt
[2025-11-22 20:28:29] HITS file was successfully produced:
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas 931864261 Nov 22 20:27 shared/HITS.pool.root.1
[2025-11-22 20:28:29]  *** Contents of shared directory: ***
[2025-11-22 20:28:29] total 1319360
[2025-11-22 20:28:29] -rw-r--r-- 2 boincer umatlas 410209500 Nov 22 07:44 ATLAS.root_0
[2025-11-22 20:28:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 07:44 start_atlas.sh
[2025-11-22 20:28:29] -rw-r--r-- 2 boincer umatlas    590102 Nov 22 07:44 input.tar.gz
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas 931864261 Nov 22 20:27 HITS.pool.root.1
[2025-11-22 20:28:29] -rw------- 1 boincer umatlas   8335360 Nov 22 20:28 result.tar.gz
20:28:30 (12887): run_atlas exited; CPU time 350226.909648
20:28:30 (12887): called boinc_finish(0)

</stderr_txt>
]]>

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