Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:30:54 (2404602): wrapper (7.7.26015): starting
07:30:54 (2404602): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 07:30:54] Arguments: --nthreads 8
[2025-11-22 07:30:54] Threads: 8
[2025-11-22 07:30:54] Checking for CVMFS
[2025-11-22 07:30:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 07:30:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 07:30:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 07:30:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 07:30:55] 2.13.2.0 4359 27974 281296 153172 3 337 33788465 40960000 10278 16776704 0 34205352 99.538 42121773 28993 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 07:30:55] CVMFS is ok
[2025-11-22 07:30:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 07:30:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 07:30:55] Further information can be found at the LHC@home message board.
[2025-11-22 07:30:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 07:30:55] Checking for apptainer binary...
[2025-11-22 07:30:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 07:30:55] Running /usr/bin/apptainer --version
[2025-11-22 07:30:55] apptainer version 1.4.4-1.el9
[2025-11-22 07:30:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 07:30:55] c-211-14.aglt2.org
[2025-11-22 07:30:55] apptainer works
[2025-11-22 07:30:55] Set ATHENA_PROC_NUMBER=8
[2025-11-22 07:30:55] Set ATHENA_CORE_NUMBER=8
[2025-11-22 07:30:55] Starting ATLAS job with PandaID=6894274105
[2025-11-22 07:30:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 21:35:47]  *** The last 200 lines of the pilot log: ***
[2025-11-23 21:35:47] 2025-11-24 02:34:32,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 21:35:47] 2025-11-24 02:34:32,740 | INFO     | time since job start (136997s) is within the limit (172800.0s)
[2025-11-23 21:35:47] 2025-11-24 02:34:34,613 | INFO     | PID=2408476 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 21:35:47] 2025-11-24 02:34:34,614 | INFO     | .. there are 18 such processes running
[2025-11-23 21:35:47] 2025-11-24 02:34:34,926 | INFO     | monitor loop #7665: job 0:6894274105 is in state 'finished'
[2025-11-23 21:35:47] 2025-11-24 02:34:34,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 21:35:47] 2025-11-24 02:34:35,623 | INFO     | time since job start (137000s) is within the limit (172800.0s)
[2025-11-23 21:35:47] 2025-11-24 02:34:37,432 | INFO     | monitor loop #7666: job 0:6894274105 is in state 'finished'
[2025-11-23 21:35:47] 2025-11-24 02:34:37,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 21:35:47] 2025-11-24 02:34:37,630 | INFO     | time since job start (137002s) is within the limit (172800.0s)
[2025-11-23 21:35:47] 2025-11-24 02:34:39,637 | INFO     | time since job start (137004s) is within the limit (172800.0s)
[2025-11-23 21:35:47] 2025-11-24 02:34:39,940 | INFO     | monitor loop #7667: job 0:6894274105 is in state 'finished'
[2025-11-23 21:35:47] 2025-11-24 02:34:39,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 21:35:47] 2025-11-24 02:34:41,644 | INFO     | time since job start (137006s) is within the limit (172800.0s)
[2025-11-23 21:35:47] 2025-11-24 02:34:42,011 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 21:35:47] 2025-11-24 02:34:42,033 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2668.5718958333337
[2025-11-23 21:35:47] 2025-11-24 02:34:42,053 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894274105/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 21:35:47] 2025-11-24 02:34:42,058 | INFO     | extracted standard info from prmon json
[2025-11-23 21:35:47] 2025-11-24 02:34:42,059 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 21:35:47] 2025-11-24 02:34:42,059 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 21:35:47] 2025-11-24 02:34:42,139 | INFO     | fitting pss+swap vs Time
[2025-11-23 21:35:47] 2025-11-24 02:34:42,143 | INFO     | sum of square deviations: 3508518325870.0566
[2025-11-23 21:35:47] 2025-11-24 02:34:42,422 | INFO     | sum of deviations: 4040468562263.3706
[2025-11-23 21:35:47] 2025-11-24 02:34:42,423 | INFO     | mean x: 1763883161.8449888
[2025-11-23 21:35:47] 2025-11-24 02:34:42,423 | INFO     | mean y: 3018705.5786191537
[2025-11-23 21:35:47] 2025-11-24 02:34:42,423 | INFO     | intersect: -2028298734.148029
[2025-11-23 21:35:47] 2025-11-24 02:34:42,434 | INFO     | chi2: 18.69958442775625
[2025-11-23 21:35:47] 2025-11-24 02:34:42,445 | INFO     | monitor loop #7668: job 0:6894274105 is in state 'finished'
[2025-11-23 21:35:47] 2025-11-24 02:34:42,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 21:35:47] 2025-11-24 02:34:42,449 | INFO     | sum of square deviations: 3485131126640.844
[2025-11-23 21:35:47] 2025-11-24 02:34:42,760 | INFO     | sum of deviations: 4842112622345.967
[2025-11-23 21:35:47] 2025-11-24 02:34:42,760 | INFO     | mean x: 1763883009.3549106
[2025-11-23 21:35:47] 2025-11-24 02:34:42,761 | INFO     | mean y: 3023932.0214285715
[2025-11-23 21:35:47] 2025-11-24 02:34:42,761 | INFO     | intersect: -2447650052.280332
[2025-11-23 21:35:47] 2025-11-24 02:34:42,768 | INFO     | chi2: 15.452828452825376
[2025-11-23 21:35:47] 2025-11-24 02:34:42,768 | INFO     | current chi2=15.452828452825376 (change=17.36271727039899 %)
[2025-11-23 21:35:47] 2025-11-24 02:34:42,768 | INFO     | right removable region: 2239
[2025-11-23 21:35:47] 2025-11-24 02:34:42,771 | INFO     | sum of square deviations: 3485124765057.425
[2025-11-23 21:35:47] 2025-11-24 02:34:43,054 | INFO     | sum of deviations: 3250389442365.9043
[2025-11-23 21:35:47] 2025-11-24 02:34:43,054 | INFO     | mean x: 1763883314.3558035
[2025-11-23 21:35:47] 2025-11-24 02:34:43,054 | INFO     | mean y: 3023855.0151785715
[2025-11-23 21:35:47] 2025-11-24 02:34:43,070 | INFO     | intersect: -1642055758.785395
[2025-11-23 21:35:47] 2025-11-24 02:34:43,074 | INFO     | chi2: 15.72900416889852
[2025-11-23 21:35:47] 2025-11-24 02:34:43,074 | INFO     | current chi2=15.72900416889852 (change=15.885808961874176 %)
[2025-11-23 21:35:47] 2025-11-24 02:34:43,074 | INFO     | left removable region: 10
[2025-11-23 21:35:47] 2025-11-24 02:34:43,089 | INFO     | sum of square deviations: 3434033580264.3223
[2025-11-23 21:35:47] 2025-11-24 02:34:43,471 | INFO     | sum of deviations: 4018101116694.2344
[2025-11-23 21:35:47] 2025-11-24 02:34:43,471 | INFO     | mean x: 1763883283.877075
[2025-11-23 21:35:47] 2025-11-24 02:34:43,471 | INFO     | mean y: 3031318.402422611
[2025-11-23 21:35:47] 2025-11-24 02:34:43,471 | INFO     | intersect: -2060856883.9136527
[2025-11-23 21:35:47] 2025-11-24 02:34:43,486 | INFO     | chi2: 11.782453785930738
[2025-11-23 21:35:47] 2025-11-24 02:34:43,487 | INFO     | current memory leak: 1.17 B/s (using 2229 data points, chi2=11.78)
[2025-11-23 21:35:47] 2025-11-24 02:34:43,489 | INFO     | could have reported an average CPU frequency of 2629 MHz (78 samples)
[2025-11-23 21:35:47] 2025-11-24 02:34:43,489 | INFO     | ..............................
[2025-11-23 21:35:47] 2025-11-24 02:34:43,489 | INFO     | . Timing measurements:
[2025-11-23 21:35:47] 2025-11-24 02:34:43,501 | INFO     | . get job = 0 s
[2025-11-23 21:35:47] 2025-11-24 02:34:43,502 | INFO     | . initial setup = 3 s
[2025-11-23 21:35:47] 2025-11-24 02:34:43,502 | INFO     | . payload setup = 11 s
[2025-11-23 21:35:47] 2025-11-24 02:34:43,502 | INFO     | . stage-in = 0 s
[2025-11-23 21:35:47] 2025-11-24 02:34:43,502 | INFO     | . payload execution = 136934 s
[2025-11-23 21:35:47] 2025-11-24 02:34:43,502 | INFO     | . stage-out = 8 s
[2025-11-23 21:35:47] 2025-11-24 02:34:43,502 | INFO     | . log creation = 2 s
[2025-11-23 21:35:47] 2025-11-24 02:34:43,502 | INFO     | ..............................
[2025-11-23 21:35:47] 2025-11-24 02:34:43,678 | INFO     | time since job start (137008s) is within the limit (172800.0s)
[2025-11-23 21:35:47] 2025-11-24 02:34:43,778 | INFO     | 
[2025-11-23 21:35:47] 2025-11-24 02:34:43,778 | INFO     | job summary report
[2025-11-23 21:35:47] 2025-11-24 02:34:43,779 | INFO     | --------------------------------------------------
[2025-11-23 21:35:47] 2025-11-24 02:34:43,779 | INFO     | PanDA job id: 6894274105
[2025-11-23 21:35:47] 2025-11-24 02:34:43,779 | INFO     | task id: 47533967
[2025-11-23 21:35:47] 2025-11-24 02:34:43,779 | INFO     | errors: (none)
[2025-11-23 21:35:47] 2025-11-24 02:34:43,779 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 21:35:47] 2025-11-24 02:34:43,779 | INFO     | pilot state: finished 
[2025-11-23 21:35:47] 2025-11-24 02:34:43,779 | INFO     | transexitcode: 0
[2025-11-23 21:35:47] 2025-11-24 02:34:43,779 | INFO     | exeerrorcode: 0
[2025-11-23 21:35:47] 2025-11-24 02:34:43,779 | INFO     | exeerrordiag: 
[2025-11-23 21:35:47] 2025-11-24 02:34:43,780 | INFO     | exitcode: 0
[2025-11-23 21:35:47] 2025-11-24 02:34:43,780 | INFO     | exitmsg: OK
[2025-11-23 21:35:47] 2025-11-24 02:34:43,780 | INFO     | cpuconsumptiontime: 331524 s
[2025-11-23 21:35:47] 2025-11-24 02:34:43,780 | INFO     | nevents: 1000
[2025-11-23 21:35:47] 2025-11-24 02:34:43,780 | INFO     | neventsw: 0
[2025-11-23 21:35:47] 2025-11-24 02:34:43,780 | INFO     | pid: 2416946
[2025-11-23 21:35:47] 2025-11-24 02:34:43,780 | INFO     | pgrp: 2416946
[2025-11-23 21:35:47] 2025-11-24 02:34:43,780 | INFO     | corecount: 8
[2025-11-23 21:35:47] 2025-11-24 02:34:43,781 | INFO     | event service: False
[2025-11-23 21:35:47] 2025-11-24 02:34:43,781 | INFO     | sizes: {0: 2298636, 1: 2298835, 10: 2299097, 12: 2299125, 136950: 2386895, 136959: 2395889, 136962: 2396073, 136989: 2396319}
[2025-11-23 21:35:47] 2025-11-24 02:34:43,781 | INFO     | --------------------------------------------------
[2025-11-23 21:35:47] 2025-11-24 02:34:43,781 | INFO     | 
[2025-11-23 21:35:47] 2025-11-24 02:34:43,781 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 21:35:47] 2025-11-24 02:34:43,829 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,829 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,829 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,830 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,830 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,830 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,830 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,830 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,830 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,830 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,831 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,831 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,831 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,831 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,831 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,831 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,831 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,832 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 21:35:47] 2025-11-24 02:34:43,832 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,832 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 21:35:47] 2025-11-24 02:34:43,832 | INFO     | job 6894274105 has completed (purged errors)
[2025-11-23 21:35:47] 2025-11-24 02:34:43,835 | INFO     | overall cleanup function is called
[2025-11-23 21:35:47] 2025-11-24 02:34:44,869 | INFO     | --- collectZombieJob: --- 10, [2416946]
[2025-11-23 21:35:47] 2025-11-24 02:34:44,870 | INFO     | zombie collector waiting for pid 2416946
[2025-11-23 21:35:47] 2025-11-24 02:34:44,870 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 21:35:47] 2025-11-24 02:34:44,870 | INFO     | collected zombie processes
[2025-11-23 21:35:47] 2025-11-24 02:34:44,870 | INFO     | will attempt to kill all subprocesses of pid=2416946
[2025-11-23 21:35:47] 2025-11-24 02:34:45,409 | INFO     | process IDs to be killed: [2416946] (in reverse order)
[2025-11-23 21:35:47] 2025-11-24 02:34:45,552 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 21:35:47] 2025-11-24 02:34:45,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 21:35:47] 2025-11-24 02:34:45,575 | INFO     | did not find any defunct processes belonging to 2416946
[2025-11-23 21:35:47] 2025-11-24 02:34:45,593 | INFO     | did not find any defunct processes belonging to 2416946
[2025-11-23 21:35:47] 2025-11-24 02:34:45,601 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 21:35:47] 2025-11-24 02:34:45,601 | INFO     | ready for new job
[2025-11-23 21:35:47] 2025-11-24 02:34:45,601 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 21:35:47] 2025-11-24 02:34:45,615 | INFO     | ***************************************
[2025-11-23 21:35:47] 2025-11-24 02:34:45,615 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 21:35:47] 2025-11-24 02:34:45,619 | INFO     | ***************************************
[2025-11-23 21:35:47] 2025-11-24 02:34:45,620 | INFO     | 
[2025-11-23 21:35:47] 2025-11-24 02:34:45,624 | INFO     | architecture information:
[2025-11-23 21:35:47] 2025-11-24 02:34:45,628 | INFO     | executing command: cat /etc/os-release
[2025-11-23 21:35:47] 2025-11-24 02:34:45,669 | INFO     | cat /etc/os-release:
[2025-11-23 21:35:47] NAME="CentOS Linux"
[2025-11-23 21:35:47] VERSION="7 (Core)"
[2025-11-23 21:35:47] ID="centos"
[2025-11-23 21:35:47] ID_LIKE="rhel fedora"
[2025-11-23 21:35:47] VERSION_ID="7"
[2025-11-23 21:35:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 21:35:47] ANSI_COLOR="0;31"
[2025-11-23 21:35:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 21:35:47] HOME_URL="https://www.centos.org/"
[2025-11-23 21:35:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 21:35:47] 
[2025-11-23 21:35:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 21:35:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 21:35:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 21:35:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 21:35:47] 
[2025-11-23 21:35:47] 2025-11-24 02:34:45,669 | INFO     | ***************************************
[2025-11-23 21:35:47] 2025-11-24 02:34:46,173 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 21:35:47] 2025-11-24 02:34:46,223 | INFO     | sufficient remaining disk space (57738788864 B)
[2025-11-23 21:35:47] 2025-11-24 02:34:46,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 21:35:47] 2025-11-24 02:34:46,224 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 21:35:47] 2025-11-24 02:34:46,224 | INFO     | update_server=False
[2025-11-23 21:35:47] 2025-11-24 02:34:46,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 21:35:47] 2025-11-24 02:34:46,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 21:35:47] 2025-11-24 02:34:46,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:35:47] 2025-11-24 02:34:46,229 | INFO     | aborting loop
[2025-11-23 21:35:47] 2025-11-24 02:34:46,823 | INFO     | all data control threads have been joined
[2025-11-23 21:35:47] 2025-11-24 02:34:46,844 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 21:35:47] 2025-11-24 02:34:47,020 | INFO     | all job control threads have been joined
[2025-11-23 21:35:47] 2025-11-24 02:34:47,057 | INFO     | all payload control threads have been joined
[2025-11-23 21:35:47] 2025-11-24 02:34:47,231 | INFO     | [job] retrieve thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:47,234 | INFO     | [job] job monitor thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:47,470 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:47,565 | INFO     | [payload] failed_post thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:47,829 | INFO     | [data] control thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:47,975 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:48,066 | INFO     | [job] control thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:48,067 | INFO     | [payload] control thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:48,195 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:48,385 | INFO     | [job] validate thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:48,484 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:48,527 | INFO     | [data] copytool_in thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:48,577 | INFO     | [payload] validate_post thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:48,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:35:47] 2025-11-24 02:34:48,852 | INFO     | [data] copytool_out thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:49,800 | INFO     | [job] queue monitor thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:34:50,236 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 21:35:47] 2025-11-24 02:35:17,418 | INFO     | PID=2408476 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 21:35:47] 2025-11-24 02:35:17,418 | INFO     | .. there are 18 such processes running
[2025-11-23 21:35:47] 2025-11-24 02:35:17,419 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 21:35:47] 2025-11-24 02:35:17,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 21:35:47] 2025-11-24 02:35:17,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 21:35:47] 2025-11-24 02:35:40,505 | INFO     | [monitor] cgroup control has ended
[2025-11-23 21:35:47] 2025-11-24 02:35:41,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508463114048)>', '<ExcThread(monitor, started 140507825035008)>']
[2025-11-23 21:35:47] 2025-11-24 02:35:41,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 21:35:47] 2025-11-24 02:35:41,571 | INFO     | [monitor] control thread has ended
[2025-11-23 21:35:47] 2025-11-24 02:35:46,497 | INFO     | all workflow threads have been joined
[2025-11-23 21:35:47] 2025-11-24 02:35:46,498 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 21:35:47] 2025-11-24 02:35:46,498 | INFO     | traces error code: 0
[2025-11-23 21:35:47] 2025-11-24 02:35:46,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 21:35:47] 2025-11-24 02:35:46,958 [wrapper] ==== pilot stdout END ====
[2025-11-23 21:35:47] 2025-11-24 02:35:46,989 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 21:35:47] 2025-11-24 02:35:47,009 [wrapper] pilotpid: 2408476
[2025-11-23 21:35:47] 2025-11-24 02:35:47,027 [wrapper] Pilot exit status: 0
[2025-11-23 21:35:47] 2025-11-24 02:35:47,111 [wrapper] pandaids: 6894274105
[2025-11-23 21:35:47] 2025-11-24 02:35:47,397 [wrapper] cleanup supervisor_pilot 2170453 2408477
[2025-11-23 21:35:47] 2025-11-24 02:35:47,433 [wrapper] Test setup, not cleaning
[2025-11-23 21:35:47] 2025-11-24 02:35:47,444 [wrapper] apfmon messages muted
[2025-11-23 21:35:47] 2025-11-24 02:35:47,473 [wrapper] ==== wrapper stdout END ====
[2025-11-23 21:35:47] 2025-11-24 02:35:47,498 [wrapper] ==== wrapper stderr END ====
[2025-11-23 21:35:47]  *** Error codes and diagnostics ***
[2025-11-23 21:35:47]     "exeErrorCode": 0,
[2025-11-23 21:35:47]     "exeErrorDiag": "",
[2025-11-23 21:35:47]     "pilotErrorCode": 0,
[2025-11-23 21:35:47]     "pilotErrorDiag": "",
[2025-11-23 21:35:47]  *** Listing of results directory ***
[2025-11-23 21:35:48] total 1344696
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 02:07 pilot3.tar.gz
[2025-11-23 21:35:48] -rwx------. 1 boincer umatlas     36292 Nov 21 02:20 runpilot2-wrapper.sh
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 02:20 queuedata.json
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas       100 Nov 22 07:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 21:35:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 07:30 run_atlas
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas       105 Nov 22 07:30 job.xml
[2025-11-23 21:35:48] -rw-r--r--. 2 boincer umatlas 408831677 Nov 22 07:30 EVNT.47493127._002299.pool.root.1
[2025-11-23 21:35:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 07:30 start_atlas.sh
[2025-11-23 21:35:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 07:30 shared
[2025-11-23 21:35:48] -rw-r--r--. 2 boincer umatlas    590101 Nov 22 07:30 input.tar.gz
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas         0 Nov 22 07:30 boinc_lockfile
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas      2786 Nov 22 07:30 pandaJob.out
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas        57 Nov 22 07:30 setup.sh.local
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas    989768 Nov 22 07:31 agis_schedconf.cvmfs.json
[2025-11-23 21:35:48] drwx------. 5 boincer umatlas      4096 Nov 22 07:31 pilot3
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas       533 Nov 23 20:36 boinc_task_state.xml
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas      6616 Nov 23 21:28 init_data.xml
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas 925257247 Nov 23 21:32 HITS.47533967._002708.pool.root.1
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas      1061 Nov 23 21:34 memory_monitor_summary.json
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas   1526164 Nov 23 21:34 agis_ddmendpoints.agis.ALL.json
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas   2969839 Nov 23 21:34 log.47533967._002708.job.log.tgz.1
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas      8623 Nov 23 21:34 heartbeat.json
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas        95 Nov 23 21:35 pilot_heartbeat.json
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas      4824 Nov 23 21:35 pilotlog.txt
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas        29 Nov 23 21:35 wrapper_checkpoint.txt
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 23 21:35 boinc_mmap_file
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas  16503890 Nov 23 21:35 log.47533967._002708.job.log.1
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas       353 Nov 23 21:35 output.list
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas       620 Nov 23 21:35 runtime_log
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas  19496960 Nov 23 21:35 result.tar.gz
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas      9344 Nov 23 21:35 runtime_log.err
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas       663 Nov 23 21:35 DFrMDmGcag8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCBJKDmY71QPo.diag
[2025-11-23 21:35:48] -rw-r--r--. 1 boincer umatlas     21869 Nov 23 21:35 stderr.txt
[2025-11-23 21:35:48] HITS file was successfully produced:
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas 925257247 Nov 23 21:32 shared/HITS.pool.root.1
[2025-11-23 21:35:48]  *** Contents of shared directory: ***
[2025-11-23 21:35:48] total 1322468
[2025-11-23 21:35:48] -rw-r--r--. 2 boincer umatlas 408831677 Nov 22 07:30 ATLAS.root_0
[2025-11-23 21:35:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 07:30 start_atlas.sh
[2025-11-23 21:35:48] -rw-r--r--. 2 boincer umatlas    590101 Nov 22 07:30 input.tar.gz
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas 925257247 Nov 23 21:32 HITS.pool.root.1
[2025-11-23 21:35:48] -rw-------. 1 boincer umatlas  19496960 Nov 23 21:35 result.tar.gz
21:35:50 (2404602): run_atlas exited; CPU time 335277.449985
21:35:50 (2404602): called boinc_finish(0)

</stderr_txt>
]]>

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