Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:55:42 (3416119): wrapper (7.7.26015): starting
04:55:42 (3416119): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 04:55:42] Arguments: --nthreads 12
[2025-11-22 04:55:42] Threads: 12
[2025-11-22 04:55:42] Checking for CVMFS
[2025-11-22 04:55:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 04:55:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 04:55:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 04:55:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 04:55:44] 2.11.5.0 4091557 22366 235948 153172 2 206 43387643 45568000 17912 130560 0 176095431 99.748 124411863 22438 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-22 04:55:44] CVMFS is ok
[2025-11-22 04:55:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 04:55:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 04:55:44] Further information can be found at the LHC@home message board.
[2025-11-22 04:55:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 04:55:44] Checking for apptainer binary...
[2025-11-22 04:55:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 04:55:44] Running /usr/bin/apptainer --version
[2025-11-22 04:55:44] apptainer version 1.4.1-1.el9
[2025-11-22 04:55:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 04:55:45] wns0073.triumf.lcg
[2025-11-22 04:55:45] apptainer works
[2025-11-22 04:55:45] Set ATHENA_PROC_NUMBER=12
[2025-11-22 04:55:45] Set ATHENA_CORE_NUMBER=12
[2025-11-22 04:55:46] Starting ATLAS job with PandaID=6895333610
[2025-11-22 04:55:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 05:02:21]  *** The last 200 lines of the pilot log: ***
[2025-11-22 05:02:21] 2025-11-22 13:01:19,890 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 05:02:21] 2025-11-22 13:01:19,891 | WARNING  | wrong length of table data, x=[1763816250.0, 1763816311.0], y=[1406.0, 369802.0] (must be same and length>=4)
[2025-11-22 05:02:21] 2025-11-22 13:01:19,931 | INFO     | could have reported an average CPU frequency of 1417 MHz (4 samples)
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | ..............................
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . Timing measurements:
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . get job = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . initial setup = 4 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . payload setup = 20 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . stage-in = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . payload execution = 115 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . stage-out = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . log creation = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | ..............................
[2025-11-22 05:02:21] 2025-11-22 13:01:19,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 05:02:21] 2025-11-22 13:01:19,936 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895333610/pilotlog.txt
[2025-11-22 05:02:21] 2025-11-22 13:01:19,994 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-22 05:02:21] - Log from pilotlog.txt -
[2025-11-22 05:02:21] 2025-11-22 13:01:19,881 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895333610/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 05:02:21] 2025-11-22 13:01:19,889 | INFO     | extracted standard info from prmon json
[2025-11-22 05:02:21] 2025-11-22 13:01:19,889 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 05:02:21] 2025-11-22 13:01:19,889 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 05:02:21] 2025-11-22 13:01:19,889 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 05:02:21] 2025-11-22 13:01:19,890 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 05:02:21] 2025-11-22 13:01:19,891 | WARNING  | wrong length of table data, x=[1763816250.0, 1763816311.0], y=[1406.0, 369802.0] (must be same and length>=4)
[2025-11-22 05:02:21] 2025-11-22 13:01:19,931 | INFO     | could have reported an average CPU frequency of 1417 MHz (4 samples)
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | ..............................
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . Timing measurements:
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . get job = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . initial setup = 4 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . payload setup = 20 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . stage-in = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . payload execution = 115 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . stage-out = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . log creation = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | ..............................
[2025-11-22 05:02:21] 2025-11-22 13:01:19,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 05:02:21] 2025-11-22 13:01:19,936 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895333610/pilotlog.txt
[2025-11-22 05:02:21] 2025-11-22 13:01:19,995 | WARNING  | 
[2025-11-22 05:02:21] [begin log extracts]
[2025-11-22 05:02:21] - Log from pilotlog.txt -
[2025-11-22 05:02:21] 2025-11-22 13:01:19,881 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895333610/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 05:02:21] 2025-11-22 13:01:19,889 | INFO     | extracted standard info from prmon json
[2025-11-22 05:02:21] 2025-11-22 13:01:19,889 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 05:02:21] 2025-11-22 13:01:19,889 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 05:02:21] 2025-11-22 13:01:19,889 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 05:02:21] 2025-11-22 13:01:19,890 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 05:02:21] 2025-11-22 13:01:19,891 | WARNING  | wrong length of table data, x=[1763816250.0, 1763816311.0], y=[1406.0, 369802.0] (must be same and length>=4)
[2025-11-22 05:02:21] 2025-11-22 13:01:19,931 | INFO     | could have reported an average CPU frequency of 1417 MHz (4 samples)
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | ..............................
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . Timing measurements:
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . get job = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . initial setup = 4 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . payload setup = 20 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . stage-in = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . payload execution = 115 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . stage-out = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | . log creation = 0 s
[2025-11-22 05:02:21] 2025-11-22 13:01:19,935 | INFO     | ..............................
[2025-11-22 05:02:21] 2025-11-22 13:01:19,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 05:02:21] 2025-11-22 13:01:19,936 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895333610/pilotlog.txt
[2025-11-22 05:02:21] [end log extracts]
[2025-11-22 05:02:21] 2025-11-22 13:01:19,995 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-22 05:02:21] 2025-11-22 13:01:19,996 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-22 05:02:21] 2025-11-22 13:01:20,106 | INFO     | 
[2025-11-22 05:02:21] 2025-11-22 13:01:20,106 | INFO     | job summary report
[2025-11-22 05:02:21] 2025-11-22 13:01:20,106 | INFO     | --------------------------------------------------
[2025-11-22 05:02:21] 2025-11-22 13:01:20,106 | INFO     | PanDA job id: 6895333610
[2025-11-22 05:02:21] 2025-11-22 13:01:20,106 | INFO     | task id: 47556137
[2025-11-22 05:02:21] 2025-11-22 13:01:20,106 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-22 04:58:59,518 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | pilot state: failed 
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | transexitcode: 65
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | exeerrorcode: 65
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | exitcode: 65
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | cpuconsumptiontime: 67 s
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | nevents: 0
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | neventsw: 0
[2025-11-22 05:02:21] 2025-11-22 13:01:20,107 | INFO     | pid: 3426892
[2025-11-22 05:02:21] 2025-11-22 13:01:20,108 | INFO     | pgrp: 3426892
[2025-11-22 05:02:21] 2025-11-22 13:01:20,108 | INFO     | corecount: 12
[2025-11-22 05:02:21] 2025-11-22 13:01:20,108 | INFO     | event service: False
[2025-11-22 05:02:21] 2025-11-22 13:01:20,108 | INFO     | sizes: {0: 2298803, 1: 2298803, 12: 2298831, 15: 2299121, 23: 2299149, 139: 2329028, 140: 2329028, 271: 2329194}
[2025-11-22 05:02:21] 2025-11-22 13:01:20,108 | INFO     | --------------------------------------------------
[2025-11-22 05:02:21] 2025-11-22 13:01:20,108 | INFO     | 
[2025-11-22 05:02:21] 2025-11-22 13:01:20,108 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-22 05:02:21] 2025-11-22 13:01:20,131 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,132 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,132 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,132 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,132 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,132 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,133 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 05:02:21] 2025-11-22 13:01:20,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,134 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 05:02:21] 2025-11-22 13:01:20,134 | INFO     | job 6895333610 has completed (purged errors)
[2025-11-22 05:02:21] 2025-11-22 13:01:20,134 | INFO     | overall cleanup function is called
[2025-11-22 05:02:21] 2025-11-22 13:01:21,151 | INFO     | --- collectZombieJob: --- 10, [3426892]
[2025-11-22 05:02:21] 2025-11-22 13:01:21,151 | INFO     | zombie collector waiting for pid 3426892
[2025-11-22 05:02:21] 2025-11-22 13:01:21,151 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 05:02:21] 2025-11-22 13:01:21,151 | INFO     | collected zombie processes
[2025-11-22 05:02:21] 2025-11-22 13:01:21,152 | INFO     | will attempt to kill all subprocesses of pid=3426892
[2025-11-22 05:02:21] 2025-11-22 13:01:21,596 | INFO     | process IDs to be killed: [3426892] (in reverse order)
[2025-11-22 05:02:21] 2025-11-22 13:01:21,705 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 05:02:21] 2025-11-22 13:01:21,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 05:02:21] 2025-11-22 13:01:21,717 | INFO     | did not find any defunct processes belonging to 3426892
[2025-11-22 05:02:21] 2025-11-22 13:01:21,728 | INFO     | did not find any defunct processes belonging to 3426892
[2025-11-22 05:02:21] 2025-11-22 13:01:21,729 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 05:02:21] 2025-11-22 13:01:21,729 | INFO     | ready for new job
[2025-11-22 05:02:21] 2025-11-22 13:01:21,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 05:02:21] 2025-11-22 13:01:21,732 | INFO     | ***************************************
[2025-11-22 05:02:21] 2025-11-22 13:01:21,732 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 05:02:21] 2025-11-22 13:01:21,732 | INFO     | ***************************************
[2025-11-22 05:02:21] 2025-11-22 13:01:21,732 | INFO     | 
[2025-11-22 05:02:21] 2025-11-22 13:01:21,735 | INFO     | architecture information:
[2025-11-22 05:02:21] 2025-11-22 13:01:21,736 | INFO     | executing command: cat /etc/os-release
[2025-11-22 05:02:21] 2025-11-22 13:01:21,750 | INFO     | cat /etc/os-release:
[2025-11-22 05:02:21] NAME="CentOS Linux"
[2025-11-22 05:02:21] VERSION="7 (Core)"
[2025-11-22 05:02:21] ID="centos"
[2025-11-22 05:02:21] ID_LIKE="rhel fedora"
[2025-11-22 05:02:21] VERSION_ID="7"
[2025-11-22 05:02:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 05:02:21] ANSI_COLOR="0;31"
[2025-11-22 05:02:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 05:02:21] HOME_URL="https://www.centos.org/"
[2025-11-22 05:02:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 05:02:21] 
[2025-11-22 05:02:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 05:02:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 05:02:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 05:02:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 05:02:21] 
[2025-11-22 05:02:21] 2025-11-22 13:01:21,751 | INFO     | ***************************************
[2025-11-22 05:02:21] 2025-11-22 13:01:22,258 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-22 05:02:21] 2025-11-22 13:01:22,313 | INFO     | sufficient remaining disk space (1178014318592 B)
[2025-11-22 05:02:21] 2025-11-22 13:01:22,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 05:02:21] 2025-11-22 13:01:22,314 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 05:02:21] 2025-11-22 13:01:22,314 | INFO     | update_server=False
[2025-11-22 05:02:21] 2025-11-22 13:01:22,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 05:02:21] 2025-11-22 13:01:22,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 05:02:21] 2025-11-22 13:01:22,315 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 05:02:21] 2025-11-22 13:01:22,502 | INFO     | all data control threads have been joined
[2025-11-22 05:02:21] 2025-11-22 13:01:22,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 05:02:21] 2025-11-22 13:01:22,657 | INFO     | aborting loop
[2025-11-22 05:02:21] 2025-11-22 13:01:23,325 | INFO     | [job] retrieve thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:23,377 | INFO     | all job control threads have been joined
[2025-11-22 05:02:21] 2025-11-22 13:01:23,508 | INFO     | [data] control thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:23,663 | INFO     | [job] job monitor thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:23,708 | INFO     | all payload control threads have been joined
[2025-11-22 05:02:21] 2025-11-22 13:01:23,881 | INFO     | [data] copytool_in thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:23,884 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:24,026 | INFO     | [payload] failed_post thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:24,324 | INFO     | [data] copytool_out thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:24,351 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:24,383 | INFO     | [job] control thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:24,388 | INFO     | [job] validate thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:24,599 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:24,659 | INFO     | [payload] validate_post thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:24,718 | INFO     | [payload] control thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:24,780 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:25,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 05:02:21] 2025-11-22 13:01:26,126 | INFO     | [job] queue monitor thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:26,321 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 05:02:21] 2025-11-22 13:01:51,916 | INFO     | PID=3420132 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 05:02:21] 2025-11-22 13:01:51,916 | INFO     | .. there are 28 such processes running
[2025-11-22 05:02:21] 2025-11-22 13:01:51,916 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 05:02:21] 2025-11-22 13:01:51,916 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 05:02:21] 2025-11-22 13:01:51,916 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 05:02:21] 2025-11-22 13:02:15,516 | INFO     | [monitor] cgroup control has ended
[2025-11-22 05:02:21] 2025-11-22 13:02:15,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350805854016)>', '<ExcThread(monitor, started 140350135990016)>']
[2025-11-22 05:02:21] 2025-11-22 13:02:16,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 05:02:21] 2025-11-22 13:02:16,066 | INFO     | [monitor] control thread has ended
[2025-11-22 05:02:21] 2025-11-22 13:02:20,857 | INFO     | all workflow threads have been joined
[2025-11-22 05:02:21] 2025-11-22 13:02:20,857 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 05:02:21] 2025-11-22 13:02:20,858 | INFO     | traces error code: 0
[2025-11-22 05:02:21] 2025-11-22 13:02:20,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 05:02:21] 2025-11-22 13:02:21,028 [wrapper] ==== pilot stdout END ====
[2025-11-22 05:02:21] 2025-11-22 13:02:21,032 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 05:02:21] 2025-11-22 13:02:21,034 [wrapper] pilotpid: 3420132
[2025-11-22 05:02:21] 2025-11-22 13:02:21,042 [wrapper] Pilot exit status: 0
[2025-11-22 05:02:21] 2025-11-22 13:02:21,075 [wrapper] pandaids: 6895333610
[2025-11-22 05:02:21] 2025-11-22 13:02:21,234 [wrapper] cleanup supervisor_pilot 3420138 3420133
[2025-11-22 05:02:21] 2025-11-22 13:02:21,240 [wrapper] Test setup, not cleaning
[2025-11-22 05:02:21] 2025-11-22 13:02:21,244 [wrapper] apfmon messages muted
[2025-11-22 05:02:21] 2025-11-22 13:02:21,247 [wrapper] ==== wrapper stdout END ====
[2025-11-22 05:02:21] 2025-11-22 13:02:21,249 [wrapper] ==== wrapper stderr END ====
[2025-11-22 05:02:21]  *** Error codes and diagnostics ***
[2025-11-22 05:02:21]     "exeErrorCode": 65,
[2025-11-22 05:02:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-22 05:02:21]     "pilotErrorCode": 1305,
[2025-11-22 05:02:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-22 05:02:21]  *** Listing of results directory ***
[2025-11-22 05:02:21] total 404252
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc    576529 Nov 21 17:38 pilot3.tar.gz
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc      5112 Nov 21 17:51 queuedata.json
[2025-11-22 05:02:21] -rwx------. 1 boinc boinc     36292 Nov 21 17:52 runpilot2-wrapper.sh
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc       100 Nov 22 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 05:02:21] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 04:55 run_atlas
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc       105 Nov 22 04:55 job.xml
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc      6594 Nov 22 04:55 init_data.xml
[2025-11-22 05:02:21] -rw-r--r--. 2 boinc boinc 409723858 Nov 22 04:55 EVNT.47483658._000208.pool.root.1
[2025-11-22 05:02:21] -rw-r--r--. 2 boinc boinc     15847 Nov 22 04:55 start_atlas.sh
[2025-11-22 05:02:21] drwxrwx--x. 2 boinc boinc      4096 Nov 22 04:55 shared
[2025-11-22 05:02:21] -rw-r--r--. 2 boinc boinc    590103 Nov 22 04:55 input.tar.gz
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc         0 Nov 22 04:55 boinc_lockfile
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc      2785 Nov 22 04:55 pandaJob.out
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc    989768 Nov 22 04:56 agis_schedconf.cvmfs.json
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc   1526164 Nov 22 04:56 agis_ddmendpoints.agis.ALL.json
[2025-11-22 05:02:21] drwx------. 5 boinc boinc      4096 Nov 22 04:56 pilot3
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc       524 Nov 22 04:58 boinc_task_state.xml
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc       995 Nov 22 04:59 memory_monitor_summary.json
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc     49528 Nov 22 04:59 log.47556137._002044.job.log.tgz.1
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc        95 Nov 22 05:01 pilot_heartbeat.json
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc     10338 Nov 22 05:01 heartbeat.json
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc      8192 Nov 22 05:02 boinc_mmap_file
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc        23 Nov 22 05:02 wrapper_checkpoint.txt
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc      4823 Nov 22 05:02 pilotlog.txt
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc    105249 Nov 22 05:02 log.47556137._002044.job.log.1
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc       186 Nov 22 05:02 output.list
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc       620 Nov 22 05:02 runtime_log
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc    174080 Nov 22 05:02 result.tar.gz
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc       644 Nov 22 05:02 saGLDmsyrg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjtHKDmgaEM7n.diag
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc      8636 Nov 22 05:02 runtime_log.err
[2025-11-22 05:02:21] -rw-r--r--. 1 boinc boinc     22487 Nov 22 05:02 stderr.txt
[2025-11-22 05:02:21] No HITS result produced
[2025-11-22 05:02:21]  *** Contents of shared directory: ***
[2025-11-22 05:02:21] total 400896
[2025-11-22 05:02:21] -rw-r--r--. 2 boinc boinc 409723858 Nov 22 04:55 ATLAS.root_0
[2025-11-22 05:02:21] -rw-r--r--. 2 boinc boinc     15847 Nov 22 04:55 start_atlas.sh
[2025-11-22 05:02:21] -rw-r--r--. 2 boinc boinc    590103 Nov 22 04:55 input.tar.gz
[2025-11-22 05:02:21] -rw-------. 1 boinc boinc    174080 Nov 22 05:02 result.tar.gz
05:02:22 (3416119): run_atlas exited; CPU time 69.236910
05:02:22 (3416119): called boinc_finish(0)

</stderr_txt>
]]>

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