Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:13:06 (1522620): wrapper (7.7.26015): starting
14:13:06 (1522620): wrapper: running run_atlas (--nthreads 2)
[2025-11-26 14:13:06] Arguments: --nthreads 2
[2025-11-26 14:13:06] Threads: 2
[2025-11-26 14:13:06] Checking for CVMFS
[2025-11-26 14:13:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 14:13:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 14:13:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 14:13:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 14:13:06] 2.9.2.0 187177 11246 65712 153322 2 56 31731826 36864001 0 130560 0 3627323 99.925 567167 7409 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 14:13:06] CVMFS is ok
[2025-11-26 14:13:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 14:13:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 14:13:06] Further information can be found at the LHC@home message board.
[2025-11-26 14:13:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 14:13:06] Checking for apptainer binary...
[2025-11-26 14:13:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 14:13:06] Running /usr/bin/apptainer --version
[2025-11-26 14:13:06] apptainer version 1.4.1-1.1
[2025-11-26 14:13:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 14:13:06] thA366
[2025-11-26 14:13:06] apptainer works
[2025-11-26 14:13:06] Set ATHENA_PROC_NUMBER=2
[2025-11-26 14:13:06] Set ATHENA_CORE_NUMBER=2
[2025-11-26 14:13:06] Starting ATLAS job with PandaID=6894274094
[2025-11-26 14:13:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:06:25]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:06:25] 2025-11-27 01:05:38,691 | INFO     | time since job start (42738s) is within the limit (172800.0s)
[2025-11-27 02:06:25] 2025-11-27 01:05:40,302 | INFO     | monitor loop #3260: job 0:6894274094 is in state 'finished'
[2025-11-27 02:06:25] 2025-11-27 01:05:40,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:06:25] 2025-11-27 01:05:40,696 | INFO     | time since job start (42740s) is within the limit (172800.0s)
[2025-11-27 02:06:25] 2025-11-27 01:05:41,498 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 02:06:25] 2025-11-27 01:05:41,499 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3923.129625
[2025-11-27 02:06:25] 2025-11-27 01:05:41,500 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894274094/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:06:25] 2025-11-27 01:05:41,500 | INFO     | extracted standard info from prmon json
[2025-11-27 02:06:25] 2025-11-27 01:05:41,500 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:06:25] 2025-11-27 01:05:41,500 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:06:25] 2025-11-27 01:05:41,504 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:06:25] 2025-11-27 01:05:41,504 | INFO     | sum of square deviations: 106358366275.0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,508 | INFO     | sum of deviations: 253997054112.9999
[2025-11-27 02:06:25] 2025-11-27 01:05:41,508 | INFO     | mean x: 1764184149.5
[2025-11-27 02:06:25] 2025-11-27 01:05:41,508 | INFO     | mean y: 2021007.8342857142
[2025-11-27 02:06:25] 2025-11-27 01:05:41,508 | INFO     | intersect: -4211070943.270416
[2025-11-27 02:06:25] 2025-11-27 01:05:41,508 | INFO     | chi2: 3.1900225276150884
[2025-11-27 02:06:25] 2025-11-27 01:05:41,509 | INFO     | sum of square deviations: 104095495940.0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,513 | INFO     | sum of deviations: 307569151762.0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,513 | INFO     | mean x: 1764183997.0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,513 | INFO     | mean y: 2024602.90647482
[2025-11-27 02:06:25] 2025-11-27 01:05:41,513 | INFO     | intersect: -5210579176.051847
[2025-11-27 02:06:25] 2025-11-27 01:05:41,513 | INFO     | chi2: 2.420498757872608
[2025-11-27 02:06:25] 2025-11-27 01:05:41,513 | INFO     | current chi2=2.420498757872608 (change=24.12283183209332 %)
[2025-11-27 02:06:25] 2025-11-27 01:05:41,513 | INFO     | right removable region: 694
[2025-11-27 02:06:25] 2025-11-27 01:05:41,513 | INFO     | sum of square deviations: 104095495940.0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,517 | INFO     | sum of deviations: 122143532633.99997
[2025-11-27 02:06:25] 2025-11-27 01:05:41,517 | INFO     | mean x: 1764184302.0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,517 | INFO     | mean y: 2029884.1482014388
[2025-11-27 02:06:25] 2025-11-27 01:05:41,517 | INFO     | intersect: -2068028007.577786
[2025-11-27 02:06:25] 2025-11-27 01:05:41,518 | INFO     | chi2: 1.1314458403272176
[2025-11-27 02:06:25] 2025-11-27 01:05:41,518 | INFO     | current chi2=1.1314458403272176 (change=64.53172883474572 %)
[2025-11-27 02:06:25] 2025-11-27 01:05:41,518 | INFO     | sum of square deviations: 101864951792.5
[2025-11-27 02:06:25] 2025-11-27 01:05:41,522 | INFO     | sum of deviations: 82114623417.49997
[2025-11-27 02:06:25] 2025-11-27 01:05:41,522 | INFO     | mean x: 1764184454.5
[2025-11-27 02:06:25] 2025-11-27 01:05:41,522 | INFO     | mean y: 2032611.627536232
[2025-11-27 02:06:25] 2025-11-27 01:05:41,522 | INFO     | intersect: -1420098745.3417122
[2025-11-27 02:06:25] 2025-11-27 01:05:41,522 | INFO     | chi2: 0.8274736310253595
[2025-11-27 02:06:25] 2025-11-27 01:05:41,522 | INFO     | current chi2=0.8274736310253595 (change=26.865820569365333 %)
[2025-11-27 02:06:25] 2025-11-27 01:05:41,523 | INFO     | sum of square deviations: 99666501270.0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,526 | INFO     | sum of deviations: 74575043822.00003
[2025-11-27 02:06:25] 2025-11-27 01:05:41,526 | INFO     | mean x: 1764184607.0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,526 | INFO     | mean y: 2033134.5839416059
[2025-11-27 02:06:25] 2025-11-27 01:05:41,527 | INFO     | intersect: -1318010638.4056518
[2025-11-27 02:06:25] 2025-11-27 01:05:41,527 | INFO     | chi2: 0.8242141980223223
[2025-11-27 02:06:25] 2025-11-27 01:05:41,527 | INFO     | current chi2=0.8242141980223223 (change=0.39390173666299266 %)
[2025-11-27 02:06:25] 2025-11-27 01:05:41,527 | INFO     | left removable region: 30
[2025-11-27 02:06:25] 2025-11-27 01:05:41,527 | INFO     | sum of square deviations: 90778222990.0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | sum of deviations: 109497086413.49994
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | mean x: 1764184881.5
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | mean y: 2038159.8810240964
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | intersect: -2125929298.132285
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | chi2: 0.04628516374311522
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | current memory leak: 1.21 B/s (using 664 data points, chi2=0.05)
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | could have reported an average CPU frequency of 4530 MHz (27 samples)
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | ..............................
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | . Timing measurements:
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | . get job = 0 s
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | . initial setup = 1 s
[2025-11-27 02:06:25] 2025-11-27 01:05:41,531 | INFO     | . payload setup = 8 s
[2025-11-27 02:06:25] 2025-11-27 01:05:41,532 | INFO     | . stage-in = 0 s
[2025-11-27 02:06:25] 2025-11-27 01:05:41,532 | INFO     | . payload execution = 42700 s
[2025-11-27 02:06:25] 2025-11-27 01:05:41,532 | INFO     | . stage-out = 1 s
[2025-11-27 02:06:25] 2025-11-27 01:05:41,532 | INFO     | . log creation = 0 s
[2025-11-27 02:06:25] 2025-11-27 01:05:41,532 | INFO     | ..............................
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | 
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | job summary report
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | --------------------------------------------------
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | PanDA job id: 6894274094
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | task id: 47533967
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | errors: (none)
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | pilot state: finished 
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | transexitcode: 0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | exeerrorcode: 0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | exeerrordiag: 
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | exitcode: 0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | exitmsg: OK
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | cpuconsumptiontime: 84583 s
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | nevents: 1000
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | neventsw: 0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | pid: 1532751
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | pgrp: 1532751
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | corecount: 2
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | event service: False
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | sizes: {0: 2284318, 6: 2284580, 11: 2284608, 42712: 2330105, 42714: 2339105, 42715: 2339161, 42723: 2339535}
[2025-11-27 02:06:25] 2025-11-27 01:05:41,560 | INFO     | --------------------------------------------------
[2025-11-27 02:06:25] 2025-11-27 01:05:41,561 | INFO     | 
[2025-11-27 02:06:25] 2025-11-27 01:05:41,561 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | job 6894274094 has completed (purged errors)
[2025-11-27 02:06:25] 2025-11-27 01:05:41,571 | INFO     | overall cleanup function is called
[2025-11-27 02:06:25] 2025-11-27 01:05:42,578 | INFO     | --- collectZombieJob: --- 10, [1532751]
[2025-11-27 02:06:25] 2025-11-27 01:05:42,579 | INFO     | zombie collector waiting for pid 1532751
[2025-11-27 02:06:25] 2025-11-27 01:05:42,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:06:25] 2025-11-27 01:05:42,579 | INFO     | collected zombie processes
[2025-11-27 02:06:25] 2025-11-27 01:05:42,579 | INFO     | will attempt to kill all subprocesses of pid=1532751
[2025-11-27 02:06:25] 2025-11-27 01:05:42,611 | INFO     | process IDs to be killed: [1532751] (in reverse order)
[2025-11-27 02:06:25] 2025-11-27 01:05:42,632 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:06:25] 2025-11-27 01:05:42,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:06:25] 2025-11-27 01:05:42,633 | INFO     | did not find any defunct processes belonging to 1532751
[2025-11-27 02:06:25] 2025-11-27 01:05:42,634 | INFO     | did not find any defunct processes belonging to 1532751
[2025-11-27 02:06:25] 2025-11-27 01:05:42,634 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:06:25] 2025-11-27 01:05:42,634 | INFO     | ready for new job
[2025-11-27 02:06:25] 2025-11-27 01:05:42,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:06:25] 2025-11-27 01:05:42,635 | INFO     | ***************************************
[2025-11-27 02:06:25] 2025-11-27 01:05:42,635 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:06:25] 2025-11-27 01:05:42,635 | INFO     | ***************************************
[2025-11-27 02:06:25] 2025-11-27 01:05:42,635 | INFO     | 
[2025-11-27 02:06:25] 2025-11-27 01:05:42,636 | INFO     | architecture information:
[2025-11-27 02:06:25] 2025-11-27 01:05:42,636 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:06:25] 2025-11-27 01:05:42,645 | INFO     | cat /etc/os-release:
[2025-11-27 02:06:25] NAME="CentOS Linux"
[2025-11-27 02:06:25] VERSION="7 (Core)"
[2025-11-27 02:06:25] ID="centos"
[2025-11-27 02:06:25] ID_LIKE="rhel fedora"
[2025-11-27 02:06:25] VERSION_ID="7"
[2025-11-27 02:06:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:06:25] ANSI_COLOR="0;31"
[2025-11-27 02:06:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:06:25] HOME_URL="https://www.centos.org/"
[2025-11-27 02:06:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:06:25] 
[2025-11-27 02:06:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:06:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:06:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:06:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:06:25] 
[2025-11-27 02:06:25] 2025-11-27 01:05:42,645 | INFO     | ***************************************
[2025-11-27 02:06:25] 2025-11-27 01:05:43,148 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 02:06:25] 2025-11-27 01:05:43,160 | INFO     | sufficient remaining disk space (488509538304 B)
[2025-11-27 02:06:25] 2025-11-27 01:05:43,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:06:25] 2025-11-27 01:05:43,161 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:06:25] 2025-11-27 01:05:43,161 | INFO     | update_server=False
[2025-11-27 02:06:25] 2025-11-27 01:05:43,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:06:25] 2025-11-27 01:05:43,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:06:25] 2025-11-27 01:05:43,265 | INFO     | all data control threads have been joined
[2025-11-27 02:06:25] 2025-11-27 01:05:43,483 | INFO     | all job control threads have been joined
[2025-11-27 02:06:25] 2025-11-27 01:05:43,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:06:25] 2025-11-27 01:05:43,812 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:06:25] 2025-11-27 01:05:43,813 | INFO     | aborting loop
[2025-11-27 02:06:25] 2025-11-27 01:05:44,167 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:44,167 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:44,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:06:25] 2025-11-27 01:05:44,271 | INFO     | [data] control thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:44,373 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:44,455 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:44,489 | INFO     | [job] control thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:44,621 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:44,645 | INFO     | all payload control threads have been joined
[2025-11-27 02:06:25] 2025-11-27 01:05:44,782 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:44,819 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:44,906 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:44,934 | INFO     | [job] validate thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:45,002 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:45,127 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:45,619 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:45,651 | INFO     | [payload] control thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:05:48,186 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:06:25] 2025-11-27 01:06:13,798 | INFO     | PID=1526331 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:06:25] 2025-11-27 01:06:13,798 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:06:25] 2025-11-27 01:06:13,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:06:25] 2025-11-27 01:06:13,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:06:25] 2025-11-27 01:06:18,681 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:06:25] 2025-11-27 01:06:19,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140089374545728)>', '<ExcThread(monitor, started 140088587568896)>']
[2025-11-27 02:06:25] 2025-11-27 01:06:19,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:06:25] 2025-11-27 01:06:19,830 | INFO     | [monitor] control thread has ended
[2025-11-27 02:06:25] 2025-11-27 01:06:24,713 | INFO     | all workflow threads have been joined
[2025-11-27 02:06:25] 2025-11-27 01:06:24,714 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:06:25] 2025-11-27 01:06:24,715 | INFO     | traces error code: 0
[2025-11-27 02:06:25] 2025-11-27 01:06:24,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:06:25] 2025-11-27 01:06:24,758 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:06:25] 2025-11-27 01:06:24,761 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:06:25] 2025-11-27 01:06:24,764 [wrapper] pilotpid: 1526331
[2025-11-27 02:06:25] 2025-11-27 01:06:24,766 [wrapper] Pilot exit status: 0
[2025-11-27 02:06:25] 2025-11-27 01:06:24,772 [wrapper] pandaids: 6894274094
[2025-11-27 02:06:25] 2025-11-27 01:06:24,785 [wrapper] cleanup supervisor_pilot 1604309 1526332
[2025-11-27 02:06:25] 2025-11-27 01:06:24,787 [wrapper] Test setup, not cleaning
[2025-11-27 02:06:25] 2025-11-27 01:06:24,789 [wrapper] apfmon messages muted
[2025-11-27 02:06:25] 2025-11-27 01:06:24,791 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:06:25] 2025-11-27 01:06:24,793 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:06:25]  *** Error codes and diagnostics ***
[2025-11-27 02:06:25]     "exeErrorCode": 0,
[2025-11-27 02:06:25]     "exeErrorDiag": "",
[2025-11-27 02:06:25]     "pilotErrorCode": 0,
[2025-11-27 02:06:25]     "pilotErrorDiag": "",
[2025-11-27 02:06:25]  *** Listing of results directory ***
[2025-11-27 02:06:25] total 1304484
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc    576529 Nov 21 08:07 pilot3.tar.gz
[2025-11-27 02:06:25] -rwx------ 1 boinc boinc     36292 Nov 21 08:23 runpilot2-wrapper.sh
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc      5112 Nov 21 08:23 queuedata.json
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc       100 Nov 26 14:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:06:25] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 14:13 run_atlas
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc       105 Nov 26 14:13 job.xml
[2025-11-27 02:06:25] -rw-r--r-- 2 boinc boinc 411331095 Nov 26 14:13 EVNT.47493127._002298.pool.root.1
[2025-11-27 02:06:25] -rw-r--r-- 2 boinc boinc    590099 Nov 26 14:13 input.tar.gz
[2025-11-27 02:06:25] -rw-r--r-- 2 boinc boinc     15847 Nov 26 14:13 start_atlas.sh
[2025-11-27 02:06:25] drwxrwx--x 2 boinc boinc      4096 Nov 26 14:13 shared
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc         0 Nov 26 14:13 boinc_setup_complete
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc      6205 Nov 26 14:13 init_data.xml
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc         0 Nov 26 14:13 boinc_lockfile
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc      2786 Nov 26 14:13 pandaJob.out
[2025-11-27 02:06:25] -rw------- 1 boinc boinc    991830 Nov 26 14:13 agis_schedconf.cvmfs.json
[2025-11-27 02:06:25] drwx------ 5 boinc boinc      4096 Nov 26 14:13 pilot3
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc       531 Nov 27 02:02 boinc_task_state.xml
[2025-11-27 02:06:25] -rw------- 1 boinc boinc 906140511 Nov 27 02:05 HITS.47533967._002697.pool.root.1
[2025-11-27 02:06:25] -rw------- 1 boinc boinc        95 Nov 27 02:05 pilot_heartbeat.json
[2025-11-27 02:06:25] -rw------- 1 boinc boinc      1021 Nov 27 02:05 memory_monitor_summary.json
[2025-11-27 02:06:25] -rw------- 1 boinc boinc   1516240 Nov 27 02:05 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:06:25] -rw------- 1 boinc boinc   1203277 Nov 27 02:05 log.47533967._002697.job.log.tgz.1
[2025-11-27 02:06:25] -rw------- 1 boinc boinc      8562 Nov 27 02:05 heartbeat.json
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc        28 Nov 27 02:05 wrapper_checkpoint.txt
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc      8192 Nov 27 02:05 boinc_mmap_file
[2025-11-27 02:06:25] -rw------- 1 boinc boinc      4752 Nov 27 02:06 pilotlog.txt
[2025-11-27 02:06:25] -rw------- 1 boinc boinc   5998806 Nov 27 02:06 log.47533967._002697.job.log.1
[2025-11-27 02:06:25] -rw------- 1 boinc boinc       353 Nov 27 02:06 output.list
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc       620 Nov 27 02:06 runtime_log
[2025-11-27 02:06:25] -rw------- 1 boinc boinc   7219200 Nov 27 02:06 result.tar.gz
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc      8898 Nov 27 02:06 runtime_log.err
[2025-11-27 02:06:25] -rw------- 1 boinc boinc       665 Nov 27 02:06 SS9MDmEfag8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiBJKDmoWsPnm.diag
[2025-11-27 02:06:25] -rw-r--r-- 1 boinc boinc     21262 Nov 27 02:06 stderr.txt
[2025-11-27 02:06:25] HITS file was successfully produced:
[2025-11-27 02:06:25] -rw------- 1 boinc boinc 906140511 Nov 27 02:05 shared/HITS.pool.root.1
[2025-11-27 02:06:25]  *** Contents of shared directory: ***
[2025-11-27 02:06:25] total 1294252
[2025-11-27 02:06:25] -rw-r--r-- 2 boinc boinc 411331095 Nov 26 14:13 ATLAS.root_0
[2025-11-27 02:06:25] -rw-r--r-- 2 boinc boinc    590099 Nov 26 14:13 input.tar.gz
[2025-11-27 02:06:25] -rw-r--r-- 2 boinc boinc     15847 Nov 26 14:13 start_atlas.sh
[2025-11-27 02:06:25] -rw------- 1 boinc boinc 906140511 Nov 27 02:05 HITS.pool.root.1
[2025-11-27 02:06:25] -rw------- 1 boinc boinc   7219200 Nov 27 02:06 result.tar.gz
02:06:26 (1522620): run_atlas exited; CPU time 84700.509128
02:06:26 (1522620): called boinc_finish(0)

</stderr_txt>
]]>

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