Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:27:32 (9826): wrapper (7.7.26015): starting
07:27:32 (9826): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 07:27:32] Arguments: --nthreads 8
[2025-11-22 07:27:32] Threads: 8
[2025-11-22 07:27:32] Checking for CVMFS
[2025-11-22 07:27:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 07:27:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 07:27:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 07:27:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 07:27:32] 2.11.2.0 2830 51395 80660 153172 3 81 11669664 20275200 1 130560 0 9852193 99.753 3184373 28308 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 07:27:32] CVMFS is ok
[2025-11-22 07:27:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 07:27:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 07:27:32] Further information can be found at the LHC@home message board.
[2025-11-22 07:27:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 07:27:32] Checking for apptainer binary...
[2025-11-22 07:27:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 07:27:32] Running /usr/bin/apptainer --version
[2025-11-22 07:27:32] apptainer version 1.3.2-1.el7
[2025-11-22 07:27:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 07:27:34] c-204-15.aglt2.org
[2025-11-22 07:27:34] apptainer works
[2025-11-22 07:27:34] Set ATHENA_PROC_NUMBER=8
[2025-11-22 07:27:34] Set ATHENA_CORE_NUMBER=8
[2025-11-22 07:27:34] Starting ATLAS job with PandaID=6894276338
[2025-11-22 07:27:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 19:35:11]  *** The last 200 lines of the pilot log: ***
[2025-11-22 19:35:11] 2025-11-23 00:34:13,511 | INFO     | time since job start (43581s) is within the limit (172800.0s)
[2025-11-22 19:35:11] 2025-11-23 00:34:13,839 | INFO     | monitor loop #3204: job 0:6894276338 is in state 'finished'
[2025-11-22 19:35:11] 2025-11-23 00:34:13,846 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:35:11] 2025-11-23 00:34:15,516 | INFO     | time since job start (43583s) is within the limit (172800.0s)
[2025-11-22 19:35:11] 2025-11-23 00:34:15,987 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 19:35:11] 2025-11-23 00:34:15,991 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-22 19:35:11] 2025-11-23 00:34:15,993 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894276338/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 19:35:11] 2025-11-23 00:34:15,994 | INFO     | extracted standard info from prmon json
[2025-11-22 19:35:11] 2025-11-23 00:34:15,994 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 19:35:11] 2025-11-23 00:34:15,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 19:35:11] 2025-11-23 00:34:16,007 | INFO     | fitting pss+swap vs Time
[2025-11-22 19:35:11] 2025-11-23 00:34:16,008 | INFO     | sum of square deviations: 112867832755.15405
[2025-11-22 19:35:11] 2025-11-23 00:34:16,018 | INFO     | sum of deviations: 769007832327.0923
[2025-11-22 19:35:11] 2025-11-23 00:34:16,018 | INFO     | mean x: 1763836251.1232493
[2025-11-22 19:35:11] 2025-11-23 00:34:16,019 | INFO     | mean y: 3193274.37394958
[2025-11-22 19:35:11] 2025-11-23 00:34:16,019 | INFO     | intersect: -12014437072.07474
[2025-11-22 19:35:11] 2025-11-23 00:34:16,020 | INFO     | chi2: 5.63730965468351
[2025-11-22 19:35:11] 2025-11-23 00:34:16,020 | INFO     | sum of square deviations: 110513347585.69786
[2025-11-22 19:35:11] 2025-11-23 00:34:16,031 | INFO     | sum of deviations: 1012258692333.5712
[2025-11-22 19:35:11] 2025-11-23 00:34:16,031 | INFO     | mean x: 1763836098.6276445
[2025-11-22 19:35:11] 2025-11-23 00:34:16,031 | INFO     | mean y: 3209021.6953455573
[2025-11-22 19:35:11] 2025-11-23 00:34:16,031 | INFO     | intersect: -16152834222.791744
[2025-11-22 19:35:11] 2025-11-23 00:34:16,032 | INFO     | chi2: 2.917421087900936
[2025-11-22 19:35:11] 2025-11-23 00:34:16,032 | INFO     | current chi2=2.917421087900936 (change=48.24798943806245 %)
[2025-11-22 19:35:11] 2025-11-23 00:34:16,033 | INFO     | sum of square deviations: 108191796773.97728
[2025-11-22 19:35:11] 2025-11-23 00:34:16,043 | INFO     | sum of deviations: 1059673421284.0225
[2025-11-22 19:35:11] 2025-11-23 00:34:16,043 | INFO     | mean x: 1763835946.1306818
[2025-11-22 19:35:11] 2025-11-23 00:34:16,044 | INFO     | mean y: 3212122.1193181816
[2025-11-22 19:35:11] 2025-11-23 00:34:16,044 | INFO     | intersect: -17272497565.231037
[2025-11-22 19:35:11] 2025-11-23 00:34:16,044 | INFO     | chi2: 2.6346743368002565
[2025-11-22 19:35:11] 2025-11-23 00:34:16,045 | INFO     | current chi2=2.6346743368002565 (change=9.69166748925208 %)
[2025-11-22 19:35:11] 2025-11-23 00:34:16,045 | INFO     | right removable region: 703
[2025-11-22 19:35:11] 2025-11-23 00:34:16,045 | INFO     | sum of square deviations: 110513076135.69781
[2025-11-22 19:35:11] 2025-11-23 00:34:16,056 | INFO     | sum of deviations: 541086115533.1847
[2025-11-22 19:35:11] 2025-11-23 00:34:16,056 | INFO     | mean x: 1763836403.6276445
[2025-11-22 19:35:11] 2025-11-23 00:34:16,056 | INFO     | mean y: 3208010.3681241185
[2025-11-22 19:35:11] 2025-11-23 00:34:16,056 | INFO     | intersect: -8632759980.451557
[2025-11-22 19:35:11] 2025-11-23 00:34:16,057 | INFO     | chi2: 3.1294713196497312
[2025-11-22 19:35:11] 2025-11-23 00:34:16,057 | INFO     | current chi2=3.1294713196497312 (change=44.48643925299105 %)
[2025-11-22 19:35:11] 2025-11-23 00:34:16,058 | INFO     | sum of square deviations: 108191383255.2373
[2025-11-22 19:35:11] 2025-11-23 00:34:16,068 | INFO     | sum of deviations: 499921214783.84827
[2025-11-22 19:35:11] 2025-11-23 00:34:16,068 | INFO     | mean x: 1763836556.1292613
[2025-11-22 19:35:11] 2025-11-23 00:34:16,068 | INFO     | mean y: 3210712.3423295454
[2025-11-22 19:35:11] 2025-11-23 00:34:16,068 | INFO     | intersect: -8146969896.219348
[2025-11-22 19:35:11] 2025-11-23 00:34:16,069 | INFO     | chi2: 3.0939967209917283
[2025-11-22 19:35:11] 2025-11-23 00:34:16,069 | INFO     | current chi2=3.0939967209917283 (change=1.133565226664978 %)
[2025-11-22 19:35:11] 2025-11-23 00:34:16,069 | INFO     | left removable region: 20
[2025-11-22 19:35:11] 2025-11-23 00:34:16,070 | INFO     | sum of square deviations: 98795499019.67502
[2025-11-22 19:35:11] 2025-11-23 00:34:16,080 | INFO     | sum of deviations: 741383710813.9205
[2025-11-22 19:35:11] 2025-11-23 00:34:16,080 | INFO     | mean x: 1763836525.6383603
[2025-11-22 19:35:11] 2025-11-23 00:34:16,080 | INFO     | mean y: 3233126.857979502
[2025-11-22 19:35:11] 2025-11-23 00:34:16,080 | INFO     | intersect: -13232994045.662071
[2025-11-22 19:35:11] 2025-11-23 00:34:16,081 | INFO     | chi2: 0.05774977771093848
[2025-11-22 19:35:11] 2025-11-23 00:34:16,081 | INFO     | current memory leak: 7.50 B/s (using 683 data points, chi2=0.06)
[2025-11-22 19:35:11] 2025-11-23 00:34:16,082 | INFO     | could have reported an average CPU frequency of 2175 MHz (27 samples)
[2025-11-22 19:35:11] 2025-11-23 00:34:16,082 | INFO     | ..............................
[2025-11-22 19:35:11] 2025-11-23 00:34:16,082 | INFO     | . Timing measurements:
[2025-11-22 19:35:11] 2025-11-23 00:34:16,082 | INFO     | . get job = 0 s
[2025-11-22 19:35:11] 2025-11-23 00:34:16,082 | INFO     | . initial setup = 2 s
[2025-11-22 19:35:11] 2025-11-23 00:34:16,082 | INFO     | . payload setup = 8 s
[2025-11-22 19:35:11] 2025-11-23 00:34:16,082 | INFO     | . stage-in = 0 s
[2025-11-22 19:35:11] 2025-11-23 00:34:16,083 | INFO     | . payload execution = 43541 s
[2025-11-22 19:35:11] 2025-11-23 00:34:16,083 | INFO     | . stage-out = 3 s
[2025-11-22 19:35:11] 2025-11-23 00:34:16,083 | INFO     | . log creation = 0 s
[2025-11-22 19:35:11] 2025-11-23 00:34:16,083 | INFO     | ..............................
[2025-11-22 19:35:11] 2025-11-23 00:34:16,177 | INFO     | 
[2025-11-22 19:35:11] 2025-11-23 00:34:16,177 | INFO     | job summary report
[2025-11-22 19:35:11] 2025-11-23 00:34:16,177 | INFO     | --------------------------------------------------
[2025-11-22 19:35:11] 2025-11-23 00:34:16,177 | INFO     | PanDA job id: 6894276338
[2025-11-22 19:35:11] 2025-11-23 00:34:16,177 | INFO     | task id: 47533967
[2025-11-22 19:35:11] 2025-11-23 00:34:16,178 | INFO     | errors: (none)
[2025-11-22 19:35:11] 2025-11-23 00:34:16,178 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 19:35:11] 2025-11-23 00:34:16,178 | INFO     | pilot state: finished 
[2025-11-22 19:35:11] 2025-11-23 00:34:16,178 | INFO     | transexitcode: 0
[2025-11-22 19:35:11] 2025-11-23 00:34:16,178 | INFO     | exeerrorcode: 0
[2025-11-22 19:35:11] 2025-11-23 00:34:16,179 | INFO     | exeerrordiag: 
[2025-11-22 19:35:11] 2025-11-23 00:34:16,179 | INFO     | exitcode: 0
[2025-11-22 19:35:11] 2025-11-23 00:34:16,179 | INFO     | exitmsg: OK
[2025-11-22 19:35:11] 2025-11-23 00:34:16,179 | INFO     | cpuconsumptiontime: 338628 s
[2025-11-22 19:35:11] 2025-11-23 00:34:16,179 | INFO     | nevents: 1000
[2025-11-22 19:35:11] 2025-11-23 00:34:16,179 | INFO     | neventsw: 0
[2025-11-22 19:35:11] 2025-11-23 00:34:16,180 | INFO     | pid: 20123
[2025-11-22 19:35:11] 2025-11-23 00:34:16,180 | INFO     | pgrp: 20123
[2025-11-22 19:35:11] 2025-11-23 00:34:16,180 | INFO     | corecount: 8
[2025-11-22 19:35:11] 2025-11-23 00:34:16,180 | INFO     | event service: False
[2025-11-22 19:35:11] 2025-11-23 00:34:16,180 | INFO     | sizes: {0: 2298806, 6: 2299068, 11: 2299096, 43554: 2344522, 43558: 2353572, 43566: 2353762}
[2025-11-22 19:35:11] 2025-11-23 00:34:16,180 | INFO     | --------------------------------------------------
[2025-11-22 19:35:11] 2025-11-23 00:34:16,181 | INFO     | 
[2025-11-22 19:35:11] 2025-11-23 00:34:16,181 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 19:35:11] 2025-11-23 00:34:16,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,210 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,210 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,210 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,211 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,211 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 19:35:11] 2025-11-23 00:34:16,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 19:35:11] 2025-11-23 00:34:16,214 | INFO     | job 6894276338 has completed (purged errors)
[2025-11-22 19:35:11] 2025-11-23 00:34:16,214 | INFO     | overall cleanup function is called
[2025-11-22 19:35:11] 2025-11-23 00:34:17,229 | INFO     | --- collectZombieJob: --- 10, [20123]
[2025-11-22 19:35:11] 2025-11-23 00:34:17,229 | INFO     | zombie collector waiting for pid 20123
[2025-11-22 19:35:11] 2025-11-23 00:34:17,230 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 19:35:11] 2025-11-23 00:34:17,230 | INFO     | collected zombie processes
[2025-11-22 19:35:11] 2025-11-23 00:34:17,230 | INFO     | will attempt to kill all subprocesses of pid=20123
[2025-11-22 19:35:11] 2025-11-23 00:34:17,320 | INFO     | process IDs to be killed: [20123] (in reverse order)
[2025-11-22 19:35:11] 2025-11-23 00:34:17,381 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 19:35:11] 2025-11-23 00:34:17,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 19:35:11] 2025-11-23 00:34:17,386 | INFO     | did not find any defunct processes belonging to 20123
[2025-11-22 19:35:11] 2025-11-23 00:34:17,390 | INFO     | did not find any defunct processes belonging to 20123
[2025-11-22 19:35:11] 2025-11-23 00:34:17,393 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 19:35:11] 2025-11-23 00:34:17,393 | INFO     | ready for new job
[2025-11-22 19:35:11] 2025-11-23 00:34:17,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 19:35:11] 2025-11-23 00:34:17,397 | INFO     | ***************************************
[2025-11-22 19:35:11] 2025-11-23 00:34:17,397 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 19:35:11] 2025-11-23 00:34:17,397 | INFO     | ***************************************
[2025-11-22 19:35:11] 2025-11-23 00:34:17,397 | INFO     | 
[2025-11-22 19:35:11] 2025-11-23 00:34:17,398 | INFO     | architecture information:
[2025-11-22 19:35:11] 2025-11-23 00:34:17,399 | INFO     | executing command: cat /etc/os-release
[2025-11-22 19:35:11] 2025-11-23 00:34:17,418 | INFO     | cat /etc/os-release:
[2025-11-22 19:35:11] NAME="CentOS Linux"
[2025-11-22 19:35:11] VERSION="7 (Core)"
[2025-11-22 19:35:11] ID="centos"
[2025-11-22 19:35:11] ID_LIKE="rhel fedora"
[2025-11-22 19:35:11] VERSION_ID="7"
[2025-11-22 19:35:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 19:35:11] ANSI_COLOR="0;31"
[2025-11-22 19:35:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 19:35:11] HOME_URL="https://www.centos.org/"
[2025-11-22 19:35:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 19:35:11] 
[2025-11-22 19:35:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 19:35:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 19:35:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 19:35:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 19:35:11] 
[2025-11-22 19:35:11] 2025-11-23 00:34:17,418 | INFO     | ***************************************
[2025-11-22 19:35:11] 2025-11-23 00:34:17,921 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 19:35:11] 2025-11-23 00:34:17,941 | INFO     | sufficient remaining disk space (17479761920 B)
[2025-11-22 19:35:11] 2025-11-23 00:34:17,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 19:35:11] 2025-11-23 00:34:17,942 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 19:35:11] 2025-11-23 00:34:17,942 | INFO     | update_server=False
[2025-11-22 19:35:11] 2025-11-23 00:34:17,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 19:35:11] 2025-11-23 00:34:17,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:35:11] 2025-11-23 00:34:17,943 | INFO     | aborting loop
[2025-11-22 19:35:11] 2025-11-23 00:34:17,944 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:35:11] 2025-11-23 00:34:18,625 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 19:35:11] 2025-11-23 00:34:18,648 | INFO     | all data control threads have been joined
[2025-11-22 19:35:11] 2025-11-23 00:34:18,656 | INFO     | all job control threads have been joined
[2025-11-22 19:35:11] 2025-11-23 00:34:18,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 19:35:11] 2025-11-23 00:34:18,845 | INFO     | all payload control threads have been joined
[2025-11-22 19:35:11] 2025-11-23 00:34:18,947 | INFO     | [job] retrieve thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:18,949 | INFO     | [job] job monitor thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:18,949 | INFO     | [job] queue monitor thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:19,160 | INFO     | [data] copytool_in thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:19,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:19,309 | INFO     | [payload] failed_post thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:19,493 | INFO     | [payload] validate_post thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:19,654 | INFO     | [data] control thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:19,661 | INFO     | [job] control thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:19,850 | INFO     | [payload] control thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:19,895 | INFO     | [job] validate thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:19,990 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:19,997 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:20,220 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:20,630 | INFO     | [data] copytool_out thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:22,699 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 19:35:11] 2025-11-23 00:34:48,724 | INFO     | PID=13583 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 19:35:11] 2025-11-23 00:34:48,725 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 19:35:11] 2025-11-23 00:34:48,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 19:35:11] 2025-11-23 00:34:48,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 19:35:11] 2025-11-23 00:35:04,322 | INFO     | [monitor] cgroup control has ended
[2025-11-22 19:35:11] 2025-11-23 00:35:05,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812256409408)>', '<ExcThread(monitor, started 139811335673600)>']
[2025-11-22 19:35:11] 2025-11-23 00:35:05,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 19:35:11] 2025-11-23 00:35:05,812 | INFO     | [monitor] control thread has ended
[2025-11-22 19:35:11] 2025-11-23 00:35:10,748 | INFO     | all workflow threads have been joined
[2025-11-22 19:35:11] 2025-11-23 00:35:10,749 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 19:35:11] 2025-11-23 00:35:10,749 | INFO     | traces error code: 0
[2025-11-22 19:35:11] 2025-11-23 00:35:10,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 19:35:11] 2025-11-23 00:35:10,866 [wrapper] ==== pilot stdout END ====
[2025-11-22 19:35:11] 2025-11-23 00:35:10,871 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 19:35:11] 2025-11-23 00:35:10,876 [wrapper] pilotpid: 13583
[2025-11-22 19:35:11] 2025-11-23 00:35:10,880 [wrapper] Pilot exit status: 0
[2025-11-22 19:35:11] 2025-11-23 00:35:10,897 [wrapper] pandaids: 6894276338
[2025-11-22 19:35:11] 2025-11-23 00:35:10,949 [wrapper] cleanup supervisor_pilot  5910 13584
[2025-11-22 19:35:11] 2025-11-23 00:35:10,954 [wrapper] Test setup, not cleaning
[2025-11-22 19:35:11] 2025-11-23 00:35:10,959 [wrapper] apfmon messages muted
[2025-11-22 19:35:11] 2025-11-23 00:35:10,963 [wrapper] ==== wrapper stdout END ====
[2025-11-22 19:35:11] 2025-11-23 00:35:10,968 [wrapper] ==== wrapper stderr END ====
[2025-11-22 19:35:11]  *** Error codes and diagnostics ***
[2025-11-22 19:35:11]     "exeErrorCode": 0,
[2025-11-22 19:35:11]     "exeErrorDiag": "",
[2025-11-22 19:35:11]     "pilotErrorCode": 0,
[2025-11-22 19:35:11]     "pilotErrorDiag": "",
[2025-11-22 19:35:11]  *** Listing of results directory ***
[2025-11-22 19:35:11] total 1303224
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 02:44 queuedata.json
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 02:44 pilot3.tar.gz
[2025-11-22 19:35:11] -rwx------ 1 boincer umatlas     36292 Nov 21 02:45 runpilot2-wrapper.sh
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas       100 Nov 22 07:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 19:35:11] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 07:27 run_atlas
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas       105 Nov 22 07:27 job.xml
[2025-11-22 19:35:11] -rw-r--r-- 2 boincer umatlas 409898802 Nov 22 07:27 EVNT.47493127._002313.pool.root.1
[2025-11-22 19:35:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 07:27 start_atlas.sh
[2025-11-22 19:35:11] drwxrwx--x 2 boincer umatlas      4096 Nov 22 07:27 shared
[2025-11-22 19:35:11] -rw-r--r-- 2 boincer umatlas    590102 Nov 22 07:27 input.tar.gz
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas         0 Nov 22 07:27 boinc_lockfile
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 07:27 pandaJob.out
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas        57 Nov 22 07:27 setup.sh.local
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas    989768 Nov 22 07:27 agis_schedconf.cvmfs.json
[2025-11-22 19:35:11] drwx------ 5 boincer umatlas      4096 Nov 22 07:27 pilot3
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas       532 Nov 22 19:25 boinc_task_state.xml
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas      5911 Nov 22 19:28 init_data.xml
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas 904745576 Nov 22 19:33 HITS.47533967._002844.pool.root.1
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas      1064 Nov 22 19:34 memory_monitor_summary.json
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas   1526164 Nov 22 19:34 agis_ddmendpoints.agis.ALL.json
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas   1968493 Nov 22 19:34 log.47533967._002844.job.log.tgz.1
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas      8660 Nov 22 19:34 heartbeat.json
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas        95 Nov 22 19:34 pilot_heartbeat.json
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 19:35 boinc_mmap_file
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas        29 Nov 22 19:35 wrapper_checkpoint.txt
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas      4746 Nov 22 19:35 pilotlog.txt
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas   5996621 Nov 22 19:35 log.47533967._002844.job.log.1
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas       353 Nov 22 19:35 output.list
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas       620 Nov 22 19:35 runtime_log
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas   7987200 Nov 22 19:35 result.tar.gz
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas       668 Nov 22 19:35 UIkLDmV0ag8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuCJKDmPBgtAn.diag
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 19:35 runtime_log.err
[2025-11-22 19:35:11] -rw-r--r-- 1 boincer umatlas     21285 Nov 22 19:35 stderr.txt
[2025-11-22 19:35:11] HITS file was successfully produced:
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas 904745576 Nov 22 19:33 shared/HITS.pool.root.1
[2025-11-22 19:35:11]  *** Contents of shared directory: ***
[2025-11-22 19:35:11] total 1292236
[2025-11-22 19:35:11] -rw-r--r-- 2 boincer umatlas 409898802 Nov 22 07:27 ATLAS.root_0
[2025-11-22 19:35:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 07:27 start_atlas.sh
[2025-11-22 19:35:11] -rw-r--r-- 2 boincer umatlas    590102 Nov 22 07:27 input.tar.gz
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas 904745576 Nov 22 19:33 HITS.pool.root.1
[2025-11-22 19:35:11] -rw------- 1 boincer umatlas   7987200 Nov 22 19:35 result.tar.gz
19:35:13 (9826): run_atlas exited; CPU time 336436.126757
19:35:13 (9826): called boinc_finish(0)

</stderr_txt>
]]>

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