Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:58:34 (1363670): wrapper (7.7.26015): starting
03:58:34 (1363670): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 03:58:34] Arguments: --nthreads 12
[2025-11-22 03:58:34] Threads: 12
[2025-11-22 03:58:34] Checking for CVMFS
[2025-11-22 03:58:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 03:58:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 03:58:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 03:58:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 03:58:35] 2.11.5.0 956277 22308 186492 153170 3 132 44490708 45568001 19734 130560 0 241907077 99.812 130131579 26065 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-22 03:58:35] CVMFS is ok
[2025-11-22 03:58:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 03:58:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 03:58:35] Further information can be found at the LHC@home message board.
[2025-11-22 03:58:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 03:58:35] Checking for apptainer binary...
[2025-11-22 03:58:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 03:58:35] Running /usr/bin/apptainer --version
[2025-11-22 03:58:35] apptainer version 1.4.1-1.el9
[2025-11-22 03:58:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 03:58:35] wns0084.triumf.lcg
[2025-11-22 03:58:35] apptainer works
[2025-11-22 03:58:35] Set ATHENA_PROC_NUMBER=12
[2025-11-22 03:58:35] Set ATHENA_CORE_NUMBER=12
[2025-11-22 03:58:35] Starting ATLAS job with PandaID=6895333061
[2025-11-22 03:58:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 04:03:20]  *** The last 200 lines of the pilot log: ***
[2025-11-22 04:03:20] 2025-11-22 12:02:47,181 | WARNING  | wrong length of table data, x=[1763812762.0, 1763812823.0], y=[1436.0, 553670.0] (must be same and length>=4)
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | could have reported an average CPU frequency of 2658 MHz (4 samples)
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | ..............................
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . Timing measurements:
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . get job = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . initial setup = 3 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . payload setup = 7 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . stage-in = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . payload execution = 82 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . stage-out = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . log creation = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | ..............................
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 04:03:20] 2025-11-22 12:02:47,183 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895333061/pilotlog.txt
[2025-11-22 04:03:20] 2025-11-22 12:02:47,197 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-22 04:03:20] - Log from pilotlog.txt -
[2025-11-22 04:03:20] 2025-11-22 12:02:47,179 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895333061/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 04:03:20] 2025-11-22 12:02:47,180 | INFO     | extracted standard info from prmon json
[2025-11-22 04:03:20] 2025-11-22 12:02:47,180 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 04:03:20] 2025-11-22 12:02:47,180 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 04:03:20] 2025-11-22 12:02:47,180 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 04:03:20] 2025-11-22 12:02:47,181 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 04:03:20] 2025-11-22 12:02:47,181 | WARNING  | wrong length of table data, x=[1763812762.0, 1763812823.0], y=[1436.0, 553670.0] (must be same and length>=4)
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | could have reported an average CPU frequency of 2658 MHz (4 samples)
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | ..............................
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . Timing measurements:
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . get job = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . initial setup = 3 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . payload setup = 7 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . stage-in = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . payload execution = 82 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . stage-out = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . log creation = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | ..............................
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 04:03:20] 2025-11-22 12:02:47,183 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895333061/pilotlog.txt
[2025-11-22 04:03:20] 2025-11-22 12:02:47,197 | WARNING  | 
[2025-11-22 04:03:20] [begin log extracts]
[2025-11-22 04:03:20] - Log from pilotlog.txt -
[2025-11-22 04:03:20] 2025-11-22 12:02:47,179 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895333061/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 04:03:20] 2025-11-22 12:02:47,180 | INFO     | extracted standard info from prmon json
[2025-11-22 04:03:20] 2025-11-22 12:02:47,180 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 04:03:20] 2025-11-22 12:02:47,180 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 04:03:20] 2025-11-22 12:02:47,180 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 04:03:20] 2025-11-22 12:02:47,181 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 04:03:20] 2025-11-22 12:02:47,181 | WARNING  | wrong length of table data, x=[1763812762.0, 1763812823.0], y=[1436.0, 553670.0] (must be same and length>=4)
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | could have reported an average CPU frequency of 2658 MHz (4 samples)
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | ..............................
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . Timing measurements:
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . get job = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . initial setup = 3 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . payload setup = 7 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . stage-in = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . payload execution = 82 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . stage-out = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | . log creation = 0 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | ..............................
[2025-11-22 04:03:20] 2025-11-22 12:02:47,182 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 04:03:20] 2025-11-22 12:02:47,183 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895333061/pilotlog.txt
[2025-11-22 04:03:20] [end log extracts]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,198 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-22 04:03:20] 2025-11-22 12:02:47,198 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | 
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | job summary report
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | --------------------------------------------------
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | PanDA job id: 6895333061
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | task id: 47556137
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-22 04:00:33,835 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | pilot state: failed 
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | transexitcode: 65
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | exeerrorcode: 65
[2025-11-22 04:03:20] 2025-11-22 12:02:47,758 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | exitcode: 65
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | cpuconsumptiontime: 44 s
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | nevents: 0
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | neventsw: 0
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | pid: 1373934
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | pgrp: 1373934
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | corecount: 12
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | event service: False
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | sizes: {0: 2298753, 6: 2299015, 11: 2299043, 93: 2328730, 97: 2328730, 219: 2328896}
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | --------------------------------------------------
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | 
[2025-11-22 04:03:20] 2025-11-22 12:02:47,759 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-22 04:03:20] 2025-11-22 12:02:47,821 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,821 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | job 6895333061 has completed (purged errors)
[2025-11-22 04:03:20] 2025-11-22 12:02:47,823 | INFO     | overall cleanup function is called
[2025-11-22 04:03:20] 2025-11-22 12:02:48,831 | INFO     | --- collectZombieJob: --- 10, [1373934]
[2025-11-22 04:03:20] 2025-11-22 12:02:48,831 | INFO     | zombie collector waiting for pid 1373934
[2025-11-22 04:03:20] 2025-11-22 12:02:48,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 04:03:20] 2025-11-22 12:02:48,831 | INFO     | collected zombie processes
[2025-11-22 04:03:20] 2025-11-22 12:02:48,831 | INFO     | will attempt to kill all subprocesses of pid=1373934
[2025-11-22 04:03:20] 2025-11-22 12:02:49,000 | INFO     | process IDs to be killed: [1373934] (in reverse order)
[2025-11-22 04:03:20] 2025-11-22 12:02:49,068 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 04:03:20] 2025-11-22 12:02:49,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 04:03:20] 2025-11-22 12:02:49,078 | INFO     | did not find any defunct processes belonging to 1373934
[2025-11-22 04:03:20] 2025-11-22 12:02:49,085 | INFO     | did not find any defunct processes belonging to 1373934
[2025-11-22 04:03:20] 2025-11-22 12:02:49,086 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 04:03:20] 2025-11-22 12:02:49,086 | INFO     | ready for new job
[2025-11-22 04:03:20] 2025-11-22 12:02:49,086 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 04:03:20] 2025-11-22 12:02:49,087 | INFO     | ***************************************
[2025-11-22 04:03:20] 2025-11-22 12:02:49,087 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 04:03:20] 2025-11-22 12:02:49,087 | INFO     | ***************************************
[2025-11-22 04:03:20] 2025-11-22 12:02:49,087 | INFO     | 
[2025-11-22 04:03:20] 2025-11-22 12:02:49,089 | INFO     | architecture information:
[2025-11-22 04:03:20] 2025-11-22 12:02:49,090 | INFO     | executing command: cat /etc/os-release
[2025-11-22 04:03:20] 2025-11-22 12:02:49,103 | INFO     | cat /etc/os-release:
[2025-11-22 04:03:20] NAME="CentOS Linux"
[2025-11-22 04:03:20] VERSION="7 (Core)"
[2025-11-22 04:03:20] ID="centos"
[2025-11-22 04:03:20] ID_LIKE="rhel fedora"
[2025-11-22 04:03:20] VERSION_ID="7"
[2025-11-22 04:03:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 04:03:20] ANSI_COLOR="0;31"
[2025-11-22 04:03:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 04:03:20] HOME_URL="https://www.centos.org/"
[2025-11-22 04:03:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 04:03:20] 
[2025-11-22 04:03:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 04:03:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 04:03:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 04:03:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 04:03:20] 
[2025-11-22 04:03:20] 2025-11-22 12:02:49,103 | INFO     | ***************************************
[2025-11-22 04:03:20] 2025-11-22 12:02:49,606 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-22 04:03:20] 2025-11-22 12:02:49,622 | INFO     | sufficient remaining disk space (1587732807680 B)
[2025-11-22 04:03:20] 2025-11-22 12:02:49,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 04:03:20] 2025-11-22 12:02:49,623 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 04:03:20] 2025-11-22 12:02:49,623 | INFO     | update_server=False
[2025-11-22 04:03:20] 2025-11-22 12:02:49,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 04:03:20] 2025-11-22 12:02:49,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 04:03:20] 2025-11-22 12:02:49,623 | INFO     | aborting loop
[2025-11-22 04:03:20] 2025-11-22 12:02:49,663 | INFO     | all data control threads have been joined
[2025-11-22 04:03:20] 2025-11-22 12:02:49,698 | INFO     | [monitor] cgroup control has ended
[2025-11-22 04:03:20] 2025-11-22 12:02:49,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 04:03:20] 2025-11-22 12:02:50,329 | INFO     | all job control threads have been joined
[2025-11-22 04:03:20] 2025-11-22 12:02:50,628 | INFO     | [job] retrieve thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:50,629 | INFO     | [job] job monitor thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:50,669 | INFO     | [data] control thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:50,881 | INFO     | all payload control threads have been joined
[2025-11-22 04:03:20] 2025-11-22 12:02:51,236 | INFO     | [payload] validate_post thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:51,314 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:51,335 | INFO     | [job] control thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:51,765 | INFO     | [data] copytool_out thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:51,785 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:51,788 | INFO     | [job] validate thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:51,874 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:51,887 | INFO     | [payload] control thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:51,984 | INFO     | [data] copytool_in thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:52,111 | INFO     | [payload] failed_post thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:52,122 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:52,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 04:03:20] 2025-11-22 12:02:52,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 04:03:20] 2025-11-22 12:02:53,290 | INFO     | [job] queue monitor thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:56,347 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 04:03:20] 2025-11-22 12:02:56,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566786844480)>', '<ExcThread(monitor, started 140566385895168)>']
[2025-11-22 04:03:20] 2025-11-22 12:03:01,638 | INFO     | all workflow threads have been joined
[2025-11-22 04:03:20] 2025-11-22 12:03:01,638 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 04:03:20] 2025-11-22 12:03:01,638 | INFO     | traces error code: 0
[2025-11-22 04:03:20] 2025-11-22 12:03:01,638 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 04:03:20] 2025-11-22 12:03:19,955 | INFO     | PID=1367319 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 04:03:20] 2025-11-22 12:03:19,956 | INFO     | .. there are 26 such processes running
[2025-11-22 04:03:20] 2025-11-22 12:03:19,956 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 04:03:20] 2025-11-22 12:03:19,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 04:03:20] 2025-11-22 12:03:19,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 04:03:20] 2025-11-22 12:03:19,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 04:03:20] 2025-11-22 12:03:19,957 | CRITICAL | thread 'MainThread' is not alive
[2025-11-22 04:03:20] 2025-11-22 12:03:19,957 | INFO     | [monitor] control thread has ended
[2025-11-22 04:03:20] 2025-11-22 12:03:20,094 [wrapper] ==== pilot stdout END ====
[2025-11-22 04:03:20] 2025-11-22 12:03:20,110 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 04:03:20] 2025-11-22 12:03:20,136 [wrapper] pilotpid: 1367319
[2025-11-22 04:03:20] 2025-11-22 12:03:20,154 [wrapper] Pilot exit status: 0
[2025-11-22 04:03:20] 2025-11-22 12:03:20,213 [wrapper] pandaids: 6895333061
[2025-11-22 04:03:20] 2025-11-22 12:03:20,258 [wrapper] cleanup supervisor_pilot 1367325 1367320
[2025-11-22 04:03:20] 2025-11-22 12:03:20,261 [wrapper] Test setup, not cleaning
[2025-11-22 04:03:20] 2025-11-22 12:03:20,263 [wrapper] apfmon messages muted
[2025-11-22 04:03:20] 2025-11-22 12:03:20,265 [wrapper] ==== wrapper stdout END ====
[2025-11-22 04:03:20] 2025-11-22 12:03:20,267 [wrapper] ==== wrapper stderr END ====
[2025-11-22 04:03:20]  *** Error codes and diagnostics ***
[2025-11-22 04:03:20]     "exeErrorCode": 65,
[2025-11-22 04:03:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-22 04:03:20]     "pilotErrorCode": 1305,
[2025-11-22 04:03:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-22 04:03:20]  *** Listing of results directory ***
[2025-11-22 04:03:20] total 403716
[2025-11-22 04:03:20] -rwx------. 1 boinc boinc     36292 Nov 21 17:07 runpilot2-wrapper.sh
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc      5112 Nov 21 17:07 queuedata.json
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc    576529 Nov 21 17:07 pilot3.tar.gz
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc       100 Nov 22 03:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 04:03:20] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 03:58 run_atlas
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc       105 Nov 22 03:58 job.xml
[2025-11-22 04:03:20] -rw-r--r--. 2 boinc boinc 409203963 Nov 22 03:58 EVNT.47483658._000198.pool.root.1
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc      6595 Nov 22 03:58 init_data.xml
[2025-11-22 04:03:20] -rw-r--r--. 2 boinc boinc     15847 Nov 22 03:58 start_atlas.sh
[2025-11-22 04:03:20] drwxrwx--x. 2 boinc boinc      4096 Nov 22 03:58 shared
[2025-11-22 04:03:20] -rw-r--r--. 2 boinc boinc    590089 Nov 22 03:58 input.tar.gz
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc         0 Nov 22 03:58 boinc_lockfile
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc      2785 Nov 22 03:58 pandaJob.out
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc    989768 Nov 22 03:58 agis_schedconf.cvmfs.json
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc   1526164 Nov 22 03:58 agis_ddmendpoints.agis.ALL.json
[2025-11-22 04:03:20] drwx------. 5 boinc boinc      4096 Nov 22 03:58 pilot3
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc       523 Nov 22 04:00 boinc_task_state.xml
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc       989 Nov 22 04:00 memory_monitor_summary.json
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc     47777 Nov 22 04:00 log.47556137._001965.job.log.tgz.1
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc     10330 Nov 22 04:02 heartbeat.json
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc      8192 Nov 22 04:03 boinc_mmap_file
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc        23 Nov 22 04:03 wrapper_checkpoint.txt
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc        95 Nov 22 04:03 pilot_heartbeat.json
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc       893 Nov 22 04:03 pilotlog.txt
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc     96942 Nov 22 04:03 log.47556137._001965.job.log.1
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc       186 Nov 22 04:03 output.list
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc       620 Nov 22 04:03 runtime_log
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc    163840 Nov 22 04:03 result.tar.gz
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc      8636 Nov 22 04:03 runtime_log.err
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc       645 Nov 22 04:03 mU9KDm2Grg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhpJKDmgNJ2om.diag
[2025-11-22 04:03:20] -rw-r--r--. 1 boinc boinc     22443 Nov 22 04:03 stderr.txt
[2025-11-22 04:03:20] No HITS result produced
[2025-11-22 04:03:20]  *** Contents of shared directory: ***
[2025-11-22 04:03:20] total 400376
[2025-11-22 04:03:20] -rw-r--r--. 2 boinc boinc 409203963 Nov 22 03:58 ATLAS.root_0
[2025-11-22 04:03:20] -rw-r--r--. 2 boinc boinc     15847 Nov 22 03:58 start_atlas.sh
[2025-11-22 04:03:20] -rw-r--r--. 2 boinc boinc    590089 Nov 22 03:58 input.tar.gz
[2025-11-22 04:03:20] -rw-------. 1 boinc boinc    163840 Nov 22 04:03 result.tar.gz
04:03:21 (1363670): run_atlas exited; CPU time 44.610631
04:03:21 (1363670): called boinc_finish(0)

</stderr_txt>
]]>

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