Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:22:23 (27231): wrapper (7.7.26015): starting
07:22:23 (27231): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 07:22:23] Arguments: --nthreads 8
[2025-11-22 07:22:23] Threads: 8
[2025-11-22 07:22:23] Checking for CVMFS
[2025-11-22 07:22:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 07:22:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 07:22:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 07:22:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 07:22:24] 2.11.2.0 2830 43098 83368 153172 1 81 10284048 20275201 1 130560 0 7110166 99.666 2812466 26929 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 07:22:24] CVMFS is ok
[2025-11-22 07:22:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 07:22:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 07:22:24] Further information can be found at the LHC@home message board.
[2025-11-22 07:22:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 07:22:24] Checking for apptainer binary...
[2025-11-22 07:22:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 07:22:24] Running /usr/bin/apptainer --version
[2025-11-22 07:22:24] apptainer version 1.3.2-1.el7
[2025-11-22 07:22:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 07:22:25] c-204-5.aglt2.org
[2025-11-22 07:22:25] apptainer works
[2025-11-22 07:22:25] Set ATHENA_PROC_NUMBER=8
[2025-11-22 07:22:25] Set ATHENA_CORE_NUMBER=8
[2025-11-22 07:22:25] Starting ATLAS job with PandaID=6894277108
[2025-11-22 07:22:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 19:53:03]  *** The last 200 lines of the pilot log: ***
[2025-11-22 19:53:03] 2025-11-23 00:52:16,082 | INFO     | monitor loop #3313: job 0:6894277108 is in state 'finished'
[2025-11-22 19:53:03] 2025-11-23 00:52:16,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:53:03] 2025-11-23 00:52:17,412 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 19:53:03] 2025-11-23 00:52:17,415 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-22 19:53:03] 2025-11-23 00:52:17,417 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894277108/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 19:53:03] 2025-11-23 00:52:17,418 | INFO     | extracted standard info from prmon json
[2025-11-22 19:53:03] 2025-11-23 00:52:17,418 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 19:53:03] 2025-11-23 00:52:17,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 19:53:03] 2025-11-23 00:52:17,430 | INFO     | fitting pss+swap vs Time
[2025-11-22 19:53:03] 2025-11-23 00:52:17,431 | INFO     | sum of square deviations: 124131702645.44089
[2025-11-22 19:53:03] 2025-11-23 00:52:17,442 | INFO     | sum of deviations: 788064401977.7357
[2025-11-22 19:53:03] 2025-11-23 00:52:17,442 | INFO     | mean x: 1763836642.5617368
[2025-11-22 19:53:03] 2025-11-23 00:52:17,442 | INFO     | mean y: 2956446.8629579376
[2025-11-22 19:53:03] 2025-11-23 00:52:17,443 | INFO     | intersect: -11194963498.512777
[2025-11-22 19:53:03] 2025-11-23 00:52:17,443 | INFO     | chi2: 5.213253273505936
[2025-11-22 19:53:03] 2025-11-23 00:52:17,444 | INFO     | sum of square deviations: 121622516748.85251
[2025-11-22 19:53:03] 2025-11-23 00:52:17,455 | INFO     | sum of deviations: 1008960062766.0815
[2025-11-22 19:53:03] 2025-11-23 00:52:17,455 | INFO     | mean x: 1763836490.0655737
[2025-11-22 19:53:03] 2025-11-23 00:52:17,455 | INFO     | mean y: 2969865.9357923497
[2025-11-22 19:53:03] 2025-11-23 00:52:17,456 | INFO     | intersect: -14629522729.169601
[2025-11-22 19:53:03] 2025-11-23 00:52:17,456 | INFO     | chi2: 2.778022444147238
[2025-11-22 19:53:03] 2025-11-23 00:52:17,456 | INFO     | current chi2=2.778022444147238 (change=46.71230614738567 %)
[2025-11-22 19:53:03] 2025-11-23 00:52:17,457 | INFO     | sum of square deviations: 119147378002.24203
[2025-11-22 19:53:03] 2025-11-23 00:52:17,468 | INFO     | sum of deviations: 1066232361676.2148
[2025-11-22 19:53:03] 2025-11-23 00:52:17,468 | INFO     | mean x: 1763836337.5694635
[2025-11-22 19:53:03] 2025-11-23 00:52:17,468 | INFO     | mean y: 2973384.5502063273
[2025-11-22 19:53:03] 2025-11-23 00:52:17,468 | INFO     | intersect: -15781338577.242401
[2025-11-22 19:53:03] 2025-11-23 00:52:17,469 | INFO     | chi2: 2.4609295752430715
[2025-11-22 19:53:03] 2025-11-23 00:52:17,469 | INFO     | current chi2=2.4609295752430715 (change=11.414337906888425 %)
[2025-11-22 19:53:03] 2025-11-23 00:52:17,469 | INFO     | right removable region: 726
[2025-11-22 19:53:03] 2025-11-23 00:52:17,470 | INFO     | sum of square deviations: 121622264208.85255
[2025-11-22 19:53:03] 2025-11-23 00:52:17,481 | INFO     | sum of deviations: 579700471410.3441
[2025-11-22 19:53:03] 2025-11-23 00:52:17,481 | INFO     | mean x: 1763836795.0655737
[2025-11-22 19:53:03] 2025-11-23 00:52:17,481 | INFO     | mean y: 2969087.263661202
[2025-11-22 19:53:03] 2025-11-23 00:52:17,482 | INFO     | intersect: -8404184226.660574
[2025-11-22 19:53:03] 2025-11-23 00:52:17,482 | INFO     | chi2: 2.880946279029793
[2025-11-22 19:53:03] 2025-11-23 00:52:17,483 | INFO     | current chi2=2.880946279029793 (change=44.73803347190259 %)
[2025-11-22 19:53:03] 2025-11-23 00:52:17,483 | INFO     | sum of square deviations: 119146962226.5145
[2025-11-22 19:53:03] 2025-11-23 00:52:17,494 | INFO     | sum of deviations: 537603167223.913
[2025-11-22 19:53:03] 2025-11-23 00:52:17,494 | INFO     | mean x: 1763836947.5667126
[2025-11-22 19:53:03] 2025-11-23 00:52:17,494 | INFO     | mean y: 2971679.5997248967
[2025-11-22 19:53:03] 2025-11-23 00:52:17,495 | INFO     | intersect: -7955639364.764823
[2025-11-22 19:53:03] 2025-11-23 00:52:17,495 | INFO     | chi2: 2.8407714456566424
[2025-11-22 19:53:03] 2025-11-23 00:52:17,495 | INFO     | current chi2=2.8407714456566424 (change=1.3945013020749548 %)
[2025-11-22 19:53:03] 2025-11-23 00:52:17,496 | INFO     | left removable region: 20
[2025-11-22 19:53:03] 2025-11-23 00:52:17,496 | INFO     | sum of square deviations: 109117594668.71408
[2025-11-22 19:53:03] 2025-11-23 00:52:17,507 | INFO     | sum of deviations: 764668035761.2634
[2025-11-22 19:53:03] 2025-11-23 00:52:17,507 | INFO     | mean x: 1763836917.0779037
[2025-11-22 19:53:03] 2025-11-23 00:52:17,507 | INFO     | mean y: 2992051.28611898
[2025-11-22 19:53:03] 2025-11-23 00:52:17,507 | INFO     | intersect: -12357523362.199926
[2025-11-22 19:53:03] 2025-11-23 00:52:17,508 | INFO     | chi2: 0.061208962118175114
[2025-11-22 19:53:03] 2025-11-23 00:52:17,508 | INFO     | current memory leak: 7.01 B/s (using 706 data points, chi2=0.06)
[2025-11-22 19:53:03] 2025-11-23 00:52:17,509 | INFO     | could have reported an average CPU frequency of 2173 MHz (28 samples)
[2025-11-22 19:53:03] 2025-11-23 00:52:17,509 | INFO     | ..............................
[2025-11-22 19:53:03] 2025-11-23 00:52:17,509 | INFO     | . Timing measurements:
[2025-11-22 19:53:03] 2025-11-23 00:52:17,509 | INFO     | . get job = 0 s
[2025-11-22 19:53:03] 2025-11-23 00:52:17,509 | INFO     | . initial setup = 2 s
[2025-11-22 19:53:03] 2025-11-23 00:52:17,509 | INFO     | . payload setup = 8 s
[2025-11-22 19:53:03] 2025-11-23 00:52:17,509 | INFO     | . stage-in = 0 s
[2025-11-22 19:53:03] 2025-11-23 00:52:17,510 | INFO     | . payload execution = 44935 s
[2025-11-22 19:53:03] 2025-11-23 00:52:17,510 | INFO     | . stage-out = 4 s
[2025-11-22 19:53:03] 2025-11-23 00:52:17,510 | INFO     | . log creation = 0 s
[2025-11-22 19:53:03] 2025-11-23 00:52:17,510 | INFO     | ..............................
[2025-11-22 19:53:03] 2025-11-23 00:52:17,600 | INFO     | 
[2025-11-22 19:53:03] 2025-11-23 00:52:17,601 | INFO     | job summary report
[2025-11-22 19:53:03] 2025-11-23 00:52:17,601 | INFO     | --------------------------------------------------
[2025-11-22 19:53:03] 2025-11-23 00:52:17,601 | INFO     | PanDA job id: 6894277108
[2025-11-22 19:53:03] 2025-11-23 00:52:17,601 | INFO     | task id: 47533967
[2025-11-22 19:53:03] 2025-11-23 00:52:17,601 | INFO     | errors: (none)
[2025-11-22 19:53:03] 2025-11-23 00:52:17,601 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 19:53:03] 2025-11-23 00:52:17,602 | INFO     | pilot state: finished 
[2025-11-22 19:53:03] 2025-11-23 00:52:17,602 | INFO     | transexitcode: 0
[2025-11-22 19:53:03] 2025-11-23 00:52:17,602 | INFO     | exeerrorcode: 0
[2025-11-22 19:53:03] 2025-11-23 00:52:17,602 | INFO     | exeerrordiag: 
[2025-11-22 19:53:03] 2025-11-23 00:52:17,602 | INFO     | exitcode: 0
[2025-11-22 19:53:03] 2025-11-23 00:52:17,603 | INFO     | exitmsg: OK
[2025-11-22 19:53:03] 2025-11-23 00:52:17,603 | INFO     | cpuconsumptiontime: 348609 s
[2025-11-22 19:53:03] 2025-11-23 00:52:17,603 | INFO     | nevents: 1000
[2025-11-22 19:53:03] 2025-11-23 00:52:17,603 | INFO     | neventsw: 0
[2025-11-22 19:53:03] 2025-11-23 00:52:17,603 | INFO     | pid: 5208
[2025-11-22 19:53:03] 2025-11-23 00:52:17,604 | INFO     | pgrp: 5208
[2025-11-22 19:53:03] 2025-11-23 00:52:17,604 | INFO     | corecount: 8
[2025-11-22 19:53:03] 2025-11-23 00:52:17,604 | INFO     | event service: False
[2025-11-22 19:53:03] 2025-11-23 00:52:17,604 | INFO     | sizes: {0: 2298756, 6: 2299018, 11: 2299046, 44947: 2345027, 44948: 2345026, 44952: 2354260, 44958: 2354450}
[2025-11-22 19:53:03] 2025-11-23 00:52:17,604 | INFO     | --------------------------------------------------
[2025-11-22 19:53:03] 2025-11-23 00:52:17,604 | INFO     | 
[2025-11-22 19:53:03] 2025-11-23 00:52:17,605 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 19:53:03] 2025-11-23 00:52:17,630 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,632 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,632 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,632 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,632 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,633 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,633 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,633 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,633 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,634 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 19:53:03] 2025-11-23 00:52:17,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,635 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 19:53:03] 2025-11-23 00:52:17,635 | INFO     | job 6894277108 has completed (purged errors)
[2025-11-22 19:53:03] 2025-11-23 00:52:17,635 | INFO     | overall cleanup function is called
[2025-11-22 19:53:03] 2025-11-23 00:52:18,651 | INFO     | --- collectZombieJob: --- 10, [5208]
[2025-11-22 19:53:03] 2025-11-23 00:52:18,652 | INFO     | zombie collector waiting for pid 5208
[2025-11-22 19:53:03] 2025-11-23 00:52:18,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 19:53:03] 2025-11-23 00:52:18,652 | INFO     | collected zombie processes
[2025-11-22 19:53:03] 2025-11-23 00:52:18,652 | INFO     | will attempt to kill all subprocesses of pid=5208
[2025-11-22 19:53:03] 2025-11-23 00:52:18,748 | INFO     | process IDs to be killed: [5208] (in reverse order)
[2025-11-22 19:53:03] 2025-11-23 00:52:18,804 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 19:53:03] 2025-11-23 00:52:18,804 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 19:53:03] 2025-11-23 00:52:18,808 | INFO     | did not find any defunct processes belonging to 5208
[2025-11-22 19:53:03] 2025-11-23 00:52:18,811 | INFO     | did not find any defunct processes belonging to 5208
[2025-11-22 19:53:03] 2025-11-23 00:52:18,814 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 19:53:03] 2025-11-23 00:52:18,814 | INFO     | ready for new job
[2025-11-22 19:53:03] 2025-11-23 00:52:18,814 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 19:53:03] 2025-11-23 00:52:18,819 | INFO     | ***************************************
[2025-11-22 19:53:03] 2025-11-23 00:52:18,819 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 19:53:03] 2025-11-23 00:52:18,819 | INFO     | ***************************************
[2025-11-22 19:53:03] 2025-11-23 00:52:18,819 | INFO     | 
[2025-11-22 19:53:03] 2025-11-23 00:52:18,820 | INFO     | architecture information:
[2025-11-22 19:53:03] 2025-11-23 00:52:18,821 | INFO     | executing command: cat /etc/os-release
[2025-11-22 19:53:03] 2025-11-23 00:52:18,839 | INFO     | cat /etc/os-release:
[2025-11-22 19:53:03] NAME="CentOS Linux"
[2025-11-22 19:53:03] VERSION="7 (Core)"
[2025-11-22 19:53:03] ID="centos"
[2025-11-22 19:53:03] ID_LIKE="rhel fedora"
[2025-11-22 19:53:03] VERSION_ID="7"
[2025-11-22 19:53:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 19:53:03] ANSI_COLOR="0;31"
[2025-11-22 19:53:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 19:53:03] HOME_URL="https://www.centos.org/"
[2025-11-22 19:53:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 19:53:03] 
[2025-11-22 19:53:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 19:53:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 19:53:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 19:53:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 19:53:03] 
[2025-11-22 19:53:03] 2025-11-23 00:52:18,840 | INFO     | ***************************************
[2025-11-22 19:53:03] 2025-11-23 00:52:19,343 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 19:53:03] 2025-11-23 00:52:19,361 | INFO     | sufficient remaining disk space (17460887552 B)
[2025-11-22 19:53:03] 2025-11-23 00:52:19,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 19:53:03] 2025-11-23 00:52:19,361 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 19:53:03] 2025-11-23 00:52:19,362 | INFO     | update_server=False
[2025-11-22 19:53:03] 2025-11-23 00:52:19,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 19:53:03] 2025-11-23 00:52:19,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:53:03] 2025-11-23 00:52:19,404 | INFO     | all job control threads have been joined
[2025-11-22 19:53:03] 2025-11-23 00:52:19,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:53:03] 2025-11-23 00:52:19,591 | INFO     | aborting loop
[2025-11-22 19:53:03] 2025-11-23 00:52:19,713 | INFO     | all data control threads have been joined
[2025-11-22 19:53:03] 2025-11-23 00:52:19,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 19:53:03] 2025-11-23 00:52:20,367 | INFO     | [job] retrieve thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:20,368 | INFO     | [job] queue monitor thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:20,410 | INFO     | [job] control thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:20,597 | INFO     | [job] job monitor thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:20,679 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:20,719 | INFO     | [data] control thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:20,822 | INFO     | all payload control threads have been joined
[2025-11-22 19:53:03] 2025-11-23 00:52:21,498 | INFO     | [payload] validate_post thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:21,531 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:21,746 | INFO     | [job] validate thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:21,790 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:21,827 | INFO     | [payload] control thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:21,829 | INFO     | [data] copytool_in thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:21,830 | INFO     | [data] copytool_out thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:21,866 | INFO     | [payload] failed_post thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:22,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 19:53:03] 2025-11-23 00:52:26,418 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:29,721 | INFO     | job.realtimelogging is not enabled
[2025-11-22 19:53:03] 2025-11-23 00:52:30,726 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 19:53:03] 2025-11-23 00:52:46,507 [wrapper] supervise_pilot (15 min periods counter: 51)
[2025-11-22 19:53:03] 2025-11-23 00:52:48,995 | INFO     | PID=30984 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 19:53:03] 2025-11-23 00:52:48,996 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 19:53:03] 2025-11-23 00:52:48,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 19:53:03] 2025-11-23 00:52:48,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 19:53:03] 2025-11-23 00:52:56,505 | INFO     | [monitor] cgroup control has ended
[2025-11-22 19:53:03] 2025-11-23 00:52:58,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139652360992576)>', '<ExcThread(monitor, started 139651155207936)>']
[2025-11-22 19:53:03] 2025-11-23 00:52:59,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 19:53:03] 2025-11-23 00:52:59,040 | INFO     | [monitor] control thread has ended
[2025-11-22 19:53:03] 2025-11-23 00:53:03,274 | INFO     | all workflow threads have been joined
[2025-11-22 19:53:03] 2025-11-23 00:53:03,281 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 19:53:03] 2025-11-23 00:53:03,281 | INFO     | traces error code: 0
[2025-11-22 19:53:03] 2025-11-23 00:53:03,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 19:53:03] 2025-11-23 00:53:03,390 [wrapper] ==== pilot stdout END ====
[2025-11-22 19:53:03] 2025-11-23 00:53:03,395 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 19:53:03] 2025-11-23 00:53:03,399 [wrapper] pilotpid: 30984
[2025-11-22 19:53:03] 2025-11-23 00:53:03,404 [wrapper] Pilot exit status: 0
[2025-11-22 19:53:03] 2025-11-23 00:53:03,421 [wrapper] pandaids: 6894277108
[2025-11-22 19:53:03] 2025-11-23 00:53:03,469 [wrapper] cleanup supervisor_pilot 25206 30985
[2025-11-22 19:53:03] 2025-11-23 00:53:03,474 [wrapper] Test setup, not cleaning
[2025-11-22 19:53:03] 2025-11-23 00:53:03,479 [wrapper] apfmon messages muted
[2025-11-22 19:53:03] 2025-11-23 00:53:03,484 [wrapper] ==== wrapper stdout END ====
[2025-11-22 19:53:03] 2025-11-23 00:53:03,489 [wrapper] ==== wrapper stderr END ====
[2025-11-22 19:53:03]  *** Error codes and diagnostics ***
[2025-11-22 19:53:03]     "exeErrorCode": 0,
[2025-11-22 19:53:03]     "exeErrorDiag": "",
[2025-11-22 19:53:03]     "pilotErrorCode": 0,
[2025-11-22 19:53:03]     "pilotErrorDiag": "",
[2025-11-22 19:53:03]  *** Listing of results directory ***
[2025-11-22 19:53:03] total 1322904
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 02:49 pilot3.tar.gz
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 02:51 queuedata.json
[2025-11-22 19:53:03] -rwx------ 1 boincer umatlas     36292 Nov 21 02:52 runpilot2-wrapper.sh
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas       100 Nov 22 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 19:53:03] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 07:22 run_atlas
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas       105 Nov 22 07:22 job.xml
[2025-11-22 19:53:03] -rw-r--r-- 2 boincer umatlas 410442395 Nov 22 07:22 EVNT.47493127._002321.pool.root.1
[2025-11-22 19:53:03] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 07:22 start_atlas.sh
[2025-11-22 19:53:03] drwxrwx--x 2 boincer umatlas      4096 Nov 22 07:22 shared
[2025-11-22 19:53:03] -rw-r--r-- 2 boincer umatlas    590108 Nov 22 07:22 input.tar.gz
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas         0 Nov 22 07:22 boinc_lockfile
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 07:22 pandaJob.out
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas        57 Nov 22 07:22 setup.sh.local
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas    989768 Nov 22 07:22 agis_schedconf.cvmfs.json
[2025-11-22 19:53:03] drwx------ 5 boincer umatlas      4096 Nov 22 07:22 pilot3
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas       533 Nov 22 19:41 boinc_task_state.xml
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas      5910 Nov 22 19:47 init_data.xml
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas 923947313 Nov 22 19:51 HITS.47533967._002923.pool.root.1
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas      1064 Nov 22 19:52 memory_monitor_summary.json
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas   1526164 Nov 22 19:52 agis_ddmendpoints.agis.ALL.json
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas   1977011 Nov 22 19:52 log.47533967._002923.job.log.tgz.1
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas      8661 Nov 22 19:52 heartbeat.json
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas        95 Nov 22 19:52 pilot_heartbeat.json
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas        29 Nov 22 19:52 wrapper_checkpoint.txt
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 19:52 boinc_mmap_file
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas      4818 Nov 22 19:53 pilotlog.txt
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas   6190795 Nov 22 19:53 log.47533967._002923.job.log.1
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas       353 Nov 22 19:53 output.list
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas       620 Nov 22 19:53 runtime_log
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas   8192000 Nov 22 19:53 result.tar.gz
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas       667 Nov 22 19:53 YS1MDmO7ag8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgSHKDmoScMam.diag
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas      9338 Nov 22 19:53 runtime_log.err
[2025-11-22 19:53:03] -rw-r--r-- 1 boincer umatlas     21249 Nov 22 19:53 stderr.txt
[2025-11-22 19:53:03] HITS file was successfully produced:
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas 923947313 Nov 22 19:51 shared/HITS.pool.root.1
[2025-11-22 19:53:03]  *** Contents of shared directory: ***
[2025-11-22 19:53:03] total 1311720
[2025-11-22 19:53:03] -rw-r--r-- 2 boincer umatlas 410442395 Nov 22 07:22 ATLAS.root_0
[2025-11-22 19:53:03] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 07:22 start_atlas.sh
[2025-11-22 19:53:03] -rw-r--r-- 2 boincer umatlas    590108 Nov 22 07:22 input.tar.gz
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas 923947313 Nov 22 19:51 HITS.pool.root.1
[2025-11-22 19:53:03] -rw------- 1 boincer umatlas   8192000 Nov 22 19:53 result.tar.gz
19:53:05 (27231): run_atlas exited; CPU time 344998.704020
19:53:05 (27231): called boinc_finish(0)

</stderr_txt>
]]>

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