Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:08:38 (2508935): wrapper (7.7.26015): starting
08:08:38 (2508935): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 08:08:38] Arguments: --nthreads 8
[2025-11-22 08:08:38] Threads: 8
[2025-11-22 08:08:38] Checking for CVMFS
[2025-11-22 08:08:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 08:08:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 08:08:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 08:08:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 08:08:40] 2.13.2.0 4359 28012 294716 153172 1 613 33850742 40960001 10249 16776704 0 34372967 99.540 42127788 28994 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 08:08:40] CVMFS is ok
[2025-11-22 08:08:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 08:08:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 08:08:40] Further information can be found at the LHC@home message board.
[2025-11-22 08:08:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 08:08:40] Checking for apptainer binary...
[2025-11-22 08:08:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 08:08:40] Running /usr/bin/apptainer --version
[2025-11-22 08:08:40] apptainer version 1.4.4-1.el9
[2025-11-22 08:08:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 08:08:40] c-211-14.aglt2.org
[2025-11-22 08:08:40] apptainer works
[2025-11-22 08:08:40] Set ATHENA_PROC_NUMBER=8
[2025-11-22 08:08:40] Set ATHENA_CORE_NUMBER=8
[2025-11-22 08:08:40] Starting ATLAS job with PandaID=6895325938
[2025-11-22 08:08:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 09:11:01]  *** The last 200 lines of the pilot log: ***
[2025-11-24 09:11:01] 2025-11-24 06:19:21,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 09:11:01] 2025-11-24 06:19:21,787 | INFO     | time since job start (148208s) is within the limit (172800.0s)
[2025-11-24 09:11:01] 2025-11-24 06:19:23,549 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 09:11:01] 2025-11-24 06:19:23,595 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2535.756875000001
[2025-11-24 09:11:01] 2025-11-24 06:19:23,616 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895325938/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 09:11:01] 2025-11-24 06:19:23,617 | INFO     | extracted standard info from prmon json
[2025-11-24 09:11:01] 2025-11-24 06:19:23,617 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 09:11:01] 2025-11-24 06:19:23,618 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 09:11:01] 2025-11-24 06:19:23,734 | INFO     | monitor loop #8203: job 0:6895325938 is in state 'finished'
[2025-11-24 09:11:01] 2025-11-24 06:19:23,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 09:11:01] 2025-11-24 06:19:23,738 | INFO     | fitting pss+swap vs Time
[2025-11-24 09:11:01] 2025-11-24 06:19:23,752 | INFO     | sum of square deviations: 4427399759563.156
[2025-11-24 09:11:01] 2025-11-24 06:19:23,817 | INFO     | time since job start (148210s) is within the limit (172800.0s)
[2025-11-24 09:11:01] 2025-11-24 06:19:24,409 | INFO     | sum of deviations: -449517256633.4353
[2025-11-24 09:11:01] 2025-11-24 06:19:24,409 | INFO     | mean x: 1763891025.3977742
[2025-11-24 09:11:01] 2025-11-24 06:19:24,409 | INFO     | mean y: 2983474.7320692497
[2025-11-24 09:11:01] 2025-11-24 06:19:24,425 | INFO     | intersect: 182072668.7955795
[2025-11-24 09:11:01] 2025-11-24 06:19:24,429 | INFO     | chi2: 45.14008983353553
[2025-11-24 09:11:01] 2025-11-24 06:19:24,445 | INFO     | sum of square deviations: 4400085685536.365
[2025-11-24 09:11:01] 2025-11-24 06:19:25,889 | INFO     | time since job start (148212s) is within the limit (172800.0s)
[2025-11-24 09:11:01] 2025-11-24 06:19:26,591 | INFO     | monitor loop #8204: job 0:6895325938 is in state 'finished'
[2025-11-24 09:11:01] 2025-11-24 06:19:26,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 09:11:01] 2025-11-24 06:19:28,237 | INFO     | time since job start (148215s) is within the limit (172800.0s)
[2025-11-24 09:11:01] 2025-11-24 06:19:29,678 | INFO     | monitor loop #8205: job 0:6895325938 is in state 'finished'
[2025-11-24 09:11:01] 2025-11-24 06:19:29,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 09:11:01] 2025-11-24 06:19:30,570 | INFO     | time since job start (148217s) is within the limit (172800.0s)
[2025-11-24 09:11:01] 2025-11-24 06:19:30,886 | INFO     | sum of deviations: 581118960872.0867
[2025-11-24 09:11:01] 2025-11-24 06:19:30,887 | INFO     | mean x: 1763890872.9099545
[2025-11-24 09:11:01] 2025-11-24 06:19:30,887 | INFO     | mean y: 2989228.523337464
[2025-11-24 09:11:01] 2025-11-24 06:19:30,887 | INFO     | intersect: -229967696.50350794
[2025-11-24 09:11:01] 2025-11-24 06:19:31,070 | INFO     | chi2: 40.28089606970422
[2025-11-24 09:11:01] 2025-11-24 06:19:31,070 | INFO     | current chi2=40.28089606970422 (change=10.764696706964259 %)
[2025-11-24 09:11:01] 2025-11-24 06:19:31,070 | INFO     | right removable region: 2420
[2025-11-24 09:11:01] 2025-11-24 06:19:31,275 | INFO     | sum of square deviations: 4400076957656.367
[2025-11-24 09:11:01] 2025-11-24 06:19:32,356 | INFO     | monitor loop #8206: job 0:6895325938 is in state 'finished'
[2025-11-24 09:11:01] 2025-11-24 06:19:32,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 09:11:01] 2025-11-24 06:19:32,858 | INFO     | time since job start (148219s) is within the limit (172800.0s)
[2025-11-24 09:11:01] 2025-11-24 06:19:34,565 | INFO     | sum of deviations: -1340129376529.8174
[2025-11-24 09:11:01] 2025-11-24 06:19:34,566 | INFO     | mean x: 1763891177.9099545
[2025-11-24 09:11:01] 2025-11-24 06:19:34,566 | INFO     | mean y: 2988445.0375877735
[2025-11-24 09:11:01] 2025-11-24 06:19:34,566 | INFO     | intersect: 540215954.2986932
[2025-11-24 09:11:01] 2025-11-24 06:19:34,574 | INFO     | chi2: 41.94723419867601
[2025-11-24 09:11:01] 2025-11-24 06:19:34,574 | INFO     | current chi2=41.94723419867601 (change=7.073215065884693 %)
[2025-11-24 09:11:01] 2025-11-24 06:19:34,575 | INFO     | left removable region: 10
[2025-11-24 09:11:01] 2025-11-24 06:19:34,582 | INFO     | sum of square deviations: 4340373904330.396
[2025-11-24 09:11:01] 2025-11-24 06:19:34,777 | INFO     | sum of deviations: -399097635490.17163
[2025-11-24 09:11:01] 2025-11-24 06:19:34,777 | INFO     | mean x: 1763891147.4352696
[2025-11-24 09:11:01] 2025-11-24 06:19:34,777 | INFO     | mean y: 2997038.595020747
[2025-11-24 09:11:01] 2025-11-24 06:19:34,777 | INFO     | intersect: 165186933.22624487
[2025-11-24 09:11:01] 2025-11-24 06:19:34,780 | INFO     | chi2: 35.72200904048866
[2025-11-24 09:11:01] 2025-11-24 06:19:34,781 | INFO     | current memory leak: -0.09 B/s (using 2410 data points, chi2=35.72)
[2025-11-24 09:11:01] 2025-11-24 06:19:34,782 | INFO     | could have reported an average CPU frequency of 2611 MHz (84 samples)
[2025-11-24 09:11:01] 2025-11-24 06:19:34,783 | INFO     | ..............................
[2025-11-24 09:11:01] 2025-11-24 06:19:34,783 | INFO     | . Timing measurements:
[2025-11-24 09:11:01] 2025-11-24 06:19:34,783 | INFO     | . get job = 0 s
[2025-11-24 09:11:01] 2025-11-24 06:19:34,783 | INFO     | . initial setup = 4 s
[2025-11-24 09:11:01] 2025-11-24 06:19:34,783 | INFO     | . payload setup = 36 s
[2025-11-24 09:11:01] 2025-11-24 06:19:34,783 | INFO     | . stage-in = 0 s
[2025-11-24 09:11:01] 2025-11-24 06:19:34,783 | INFO     | . payload execution = 147964 s
[2025-11-24 09:11:01] 2025-11-24 06:19:34,784 | INFO     | . stage-out = 91 s
[2025-11-24 09:11:01] 2025-11-24 06:19:34,784 | INFO     | . log creation = 15 s
[2025-11-24 09:11:01] 2025-11-24 06:19:34,784 | INFO     | ..............................
[2025-11-24 09:11:01] 2025-11-24 06:19:35,002 | INFO     | 
[2025-11-24 09:11:01] 2025-11-24 06:19:35,003 | INFO     | job summary report
[2025-11-24 09:11:01] 2025-11-24 06:19:35,003 | INFO     | --------------------------------------------------
[2025-11-24 09:11:01] 2025-11-24 06:19:35,003 | INFO     | PanDA job id: 6895325938
[2025-11-24 09:11:01] 2025-11-24 06:19:35,003 | INFO     | task id: 47556137
[2025-11-24 09:11:01] 2025-11-24 06:19:35,003 | INFO     | errors: (none)
[2025-11-24 09:11:01] 2025-11-24 06:19:35,003 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 09:11:01] 2025-11-24 06:19:35,004 | INFO     | pilot state: finished 
[2025-11-24 09:11:01] 2025-11-24 06:19:35,004 | INFO     | transexitcode: 0
[2025-11-24 09:11:01] 2025-11-24 06:19:35,004 | INFO     | exeerrorcode: 0
[2025-11-24 09:11:01] 2025-11-24 06:19:35,004 | INFO     | exeerrordiag: 
[2025-11-24 09:11:01] 2025-11-24 06:19:35,004 | INFO     | exitcode: 0
[2025-11-24 09:11:01] 2025-11-24 06:19:35,004 | INFO     | exitmsg: OK
[2025-11-24 09:11:01] 2025-11-24 06:19:35,004 | INFO     | cpuconsumptiontime: 335409 s
[2025-11-24 09:11:01] 2025-11-24 06:19:35,004 | INFO     | nevents: 1000
[2025-11-24 09:11:01] 2025-11-24 06:19:35,005 | INFO     | neventsw: 0
[2025-11-24 09:11:01] 2025-11-24 06:19:35,005 | INFO     | pid: 2523244
[2025-11-24 09:11:01] 2025-11-24 06:19:35,005 | INFO     | pgrp: 2523244
[2025-11-24 09:11:01] 2025-11-24 06:19:35,005 | INFO     | corecount: 8
[2025-11-24 09:11:01] 2025-11-24 06:19:35,005 | INFO     | event service: False
[2025-11-24 09:11:01] 2025-11-24 06:19:35,005 | INFO     | sizes: {0: 2298631, 1: 2298830, 12: 2298830, 15: 2299120, 23: 2299148, 148002: 2390705, 148003: 2390832, 148098: 2390832, 148102: 2400156, 148180: 2400180}
[2025-11-24 09:11:01] 2025-11-24 06:19:35,005 | INFO     | --------------------------------------------------
[2025-11-24 09:11:01] 2025-11-24 06:19:35,005 | INFO     | 
[2025-11-24 09:11:01] 2025-11-24 06:19:35,006 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 09:11:01] 2025-11-24 06:19:35,173 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,173 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,173 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,173 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,175 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 09:11:01] 2025-11-24 06:19:35,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,176 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 09:11:01] 2025-11-24 06:19:35,176 | INFO     | job 6895325938 has completed (purged errors)
[2025-11-24 09:11:01] 2025-11-24 06:19:35,176 | INFO     | overall cleanup function is called
[2025-11-24 09:11:01] 2025-11-24 06:19:36,246 | INFO     | --- collectZombieJob: --- 10, [2523244]
[2025-11-24 09:11:01] 2025-11-24 06:19:36,247 | INFO     | zombie collector waiting for pid 2523244
[2025-11-24 09:11:01] 2025-11-24 06:19:36,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 09:11:01] 2025-11-24 06:19:36,247 | INFO     | collected zombie processes
[2025-11-24 09:11:01] 2025-11-24 06:19:36,247 | INFO     | will attempt to kill all subprocesses of pid=2523244
[2025-11-24 09:11:01] 2025-11-24 06:19:39,386 | INFO     | process IDs to be killed: [2523244] (in reverse order)
[2025-11-24 09:11:01] 2025-11-24 06:19:40,788 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 09:11:01] 2025-11-24 06:19:40,789 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 09:11:01] 2025-11-24 06:19:40,854 | INFO     | did not find any defunct processes belonging to 2523244
[2025-11-24 09:11:01] 2025-11-24 06:19:41,127 | INFO     | did not find any defunct processes belonging to 2523244
[2025-11-24 09:11:01] 2025-11-24 06:19:41,166 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 09:11:01] 2025-11-24 06:19:41,166 | INFO     | ready for new job
[2025-11-24 09:11:01] 2025-11-24 06:19:41,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 09:11:01] 2025-11-24 06:19:41,236 | INFO     | ***************************************
[2025-11-24 09:11:01] 2025-11-24 06:19:41,236 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 09:11:01] 2025-11-24 06:19:41,236 | INFO     | ***************************************
[2025-11-24 09:11:01] 2025-11-24 06:19:41,236 | INFO     | 
[2025-11-24 09:11:01] 2025-11-24 06:19:41,271 | INFO     | architecture information:
[2025-11-24 09:11:01] 2025-11-24 06:19:41,315 | INFO     | executing command: cat /etc/os-release
[2025-11-24 09:11:01] 2025-11-24 06:19:41,479 | INFO     | cat /etc/os-release:
[2025-11-24 09:11:01] NAME="CentOS Linux"
[2025-11-24 09:11:01] VERSION="7 (Core)"
[2025-11-24 09:11:01] ID="centos"
[2025-11-24 09:11:01] ID_LIKE="rhel fedora"
[2025-11-24 09:11:01] VERSION_ID="7"
[2025-11-24 09:11:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 09:11:01] ANSI_COLOR="0;31"
[2025-11-24 09:11:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 09:11:01] HOME_URL="https://www.centos.org/"
[2025-11-24 09:11:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 09:11:01] 
[2025-11-24 09:11:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 09:11:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 09:11:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 09:11:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 09:11:01] 
[2025-11-24 09:11:01] 2025-11-24 06:19:41,479 | INFO     | ***************************************
[2025-11-24 09:11:01] 2025-11-24 06:19:42,031 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 09:11:01] 2025-11-24 06:19:42,291 | INFO     | sufficient remaining disk space (58610155520 B)
[2025-11-24 09:11:01] 2025-11-24 06:19:42,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 09:11:01] 2025-11-24 06:19:42,291 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 09:11:01] 2025-11-24 06:19:42,292 | INFO     | update_server=False
[2025-11-24 09:11:01] 2025-11-24 06:19:42,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 09:11:01] 2025-11-24 06:19:42,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 09:11:01] 2025-11-24 06:19:42,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 09:11:01] 2025-11-24 06:19:42,401 | INFO     | all job control threads have been joined
[2025-11-24 09:11:01] 2025-11-24 06:19:42,756 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 09:11:01] 2025-11-24 06:19:42,757 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 09:11:01] 2025-11-24 06:19:42,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:11:01] 2025-11-24 06:19:42,757 | INFO     | will abort loop
[2025-11-24 09:11:01] 2025-11-24 06:19:42,958 | INFO     | all data control threads have been joined
[2025-11-24 09:11:01] 2025-11-24 06:19:43,318 | INFO     | [job] retrieve thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:43,429 | INFO     | [job] control thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:43,767 | INFO     | all payload control threads have been joined
[2025-11-24 09:11:01] 2025-11-24 06:19:43,792 | INFO     | [job] job monitor thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:43,965 | INFO     | [data] control thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:44,065 | INFO     | [payload] failed_post thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:44,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:11:01] 2025-11-24 06:19:44,334 | INFO     | [payload] validate_post thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:44,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:44,350 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:44,365 | INFO     | [data] copytool_out thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:44,705 | INFO     | [data] copytool_in thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:44,713 | INFO     | [job] validate thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:44,721 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:44,797 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:44,814 | INFO     | [payload] control thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:45,185 | INFO     | [job] queue monitor thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:19:46,371 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 09:11:01] 2025-11-24 06:20:06,583 | INFO     | [monitor] cgroup control has ended
[2025-11-24 09:11:01] 2025-11-24 06:20:06,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920271648576)>', '<ExcThread(monitor, started 139919699736320)>']
[2025-11-24 09:11:01] 2025-11-24 06:20:12,166 | INFO     | all workflow threads have been joined
[2025-11-24 09:11:01] 2025-11-24 06:20:12,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 09:11:01] 2025-11-24 06:20:12,166 | INFO     | traces error code: 0
[2025-11-24 09:11:01] 2025-11-24 06:20:12,167 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 09:11:01] 2025-11-24 06:20:21,943 | INFO     | PID=2512918 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 09:11:01] 2025-11-24 06:20:21,976 | INFO     | .. there are 17 such processes running
[2025-11-24 09:11:01] 2025-11-24 06:20:21,978 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 09:11:01] 2025-11-24 06:20:21,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 09:11:01] 2025-11-24 06:20:21,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 09:11:01] 2025-11-24 06:20:21,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 09:11:01] 2025-11-24 06:20:21,978 | INFO     | [monitor] control thread has ended
[2025-11-24 09:11:01] 2025-11-24 06:20:24,778 [wrapper] ==== pilot stdout END ====
[2025-11-24 09:11:01] 2025-11-24 06:20:24,829 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 09:11:01] 2025-11-24 06:20:24,864 [wrapper] pilotpid: 2512918
[2025-11-24 09:11:01] 2025-11-24 06:20:24,916 [wrapper] Pilot exit status: 0
[2025-11-24 09:11:01] 2025-11-24 06:20:25,036 [wrapper] pandaids: 6895325938
[2025-11-24 09:11:01] 2025-11-24 06:20:26,005 [wrapper] cleanup supervisor_pilot 2533536 2512919
[2025-11-24 09:11:01] 2025-11-24 06:20:26,042 [wrapper] Test setup, not cleaning
[2025-11-24 09:11:01] 2025-11-24 06:20:26,083 [wrapper] apfmon messages muted
[2025-11-24 09:11:01] 2025-11-24 06:20:26,203 [wrapper] ==== wrapper stdout END ====
[2025-11-24 09:11:01] 2025-11-24 06:20:26,267 [wrapper] ==== wrapper stderr END ====
[2025-11-24 09:11:01]  *** Error codes and diagnostics ***
[2025-11-24 09:11:01]     "exeErrorCode": 0,
[2025-11-24 09:11:01]     "exeErrorDiag": "",
[2025-11-24 09:11:01]     "pilotErrorCode": 0,
[2025-11-24 09:11:01]     "pilotErrorDiag": "",
[2025-11-24 09:11:01]  *** Listing of results directory ***
[2025-11-24 09:11:01] total 1354176
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 09:47 pilot3.tar.gz
[2025-11-24 09:11:01] -rwx------. 1 boincer umatlas     36292 Nov 21 09:48 runpilot2-wrapper.sh
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 09:48 queuedata.json
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas       100 Nov 22 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 09:11:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 08:08 run_atlas
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas       105 Nov 22 08:08 job.xml
[2025-11-24 09:11:01] -rw-r--r--. 2 boincer umatlas 409906706 Nov 22 08:08 EVNT.47483658._000036.pool.root.1
[2025-11-24 09:11:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 08:08 start_atlas.sh
[2025-11-24 09:11:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 08:08 shared
[2025-11-24 09:11:01] -rw-r--r--. 2 boincer umatlas    590102 Nov 22 08:08 input.tar.gz
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas         0 Nov 22 08:08 boinc_lockfile
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas      2783 Nov 22 08:08 pandaJob.out
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas        57 Nov 22 08:08 setup.sh.local
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas    989768 Nov 22 08:09 agis_schedconf.cvmfs.json
[2025-11-24 09:11:01] drwx------. 5 boincer umatlas      4096 Nov 22 08:09 pilot3
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas       533 Nov 23 23:55 boinc_task_state.xml
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas 931109824 Nov 24 01:08 HITS.47556137._000356.pool.root.1
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas      1061 Nov 24 01:16 memory_monitor_summary.json
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas   1526164 Nov 24 01:16 agis_ddmendpoints.agis.ALL.json
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas   3099301 Nov 24 01:17 log.47556137._000356.job.log.tgz.1
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas      8625 Nov 24 01:19 heartbeat.json
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas        95 Nov 24 01:20 pilot_heartbeat.json
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas       823 Nov 24 01:20 pilotlog.txt
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas  17772748 Nov 24 01:20 log.47556137._000356.job.log.1
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas       353 Nov 24 01:20 output.list
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas       620 Nov 24 01:20 runtime_log
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas  20889600 Nov 24 01:20 result.tar.gz
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas      9344 Nov 24 01:20 runtime_log.err
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas       663 Nov 24 01:20 80GODm8bhg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrgHKDmAFcmIm.diag
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas      6617 Nov 24 09:10 init_data.xml
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 09:10 boinc_mmap_file
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas        29 Nov 24 09:11 wrapper_checkpoint.txt
[2025-11-24 09:11:01] -rw-r--r--. 1 boincer umatlas     21805 Nov 24 09:11 stderr.txt
[2025-11-24 09:11:01] HITS file was successfully produced:
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas 931109824 Nov 24 01:08 shared/HITS.pool.root.1
[2025-11-24 09:11:01]  *** Contents of shared directory: ***
[2025-11-24 09:11:01] total 1330588
[2025-11-24 09:11:01] -rw-r--r--. 2 boincer umatlas 409906706 Nov 22 08:08 ATLAS.root_0
[2025-11-24 09:11:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 08:08 start_atlas.sh
[2025-11-24 09:11:01] -rw-r--r--. 2 boincer umatlas    590102 Nov 22 08:08 input.tar.gz
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas 931109824 Nov 24 01:08 HITS.pool.root.1
[2025-11-24 09:11:01] -rw-------. 1 boincer umatlas  20889600 Nov 24 01:20 result.tar.gz
09:11:03 (2508935): run_atlas exited; CPU time 339049.664855
09:11:03 (2508935): called boinc_finish(0)

</stderr_txt>
]]>

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