Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:04:02 (965359): wrapper (7.7.26015): starting
04:04:02 (965359): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 04:04:02] Arguments: --nthreads 3
[2025-11-25 04:04:02] Threads: 3
[2025-11-25 04:04:02] Checking for CVMFS
[2025-11-25 04:04:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:04:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:04:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:04:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:04:02] 2.9.2.0 3943730 9165 84744 153266 1 81 29764435 36864000 0 130560 0 3384766 99.927 482538 4564 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 04:04:02] CVMFS is ok
[2025-11-25 04:04:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:04:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:04:02] Further information can be found at the LHC@home message board.
[2025-11-25 04:04:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:04:02] Checking for apptainer binary...
[2025-11-25 04:04:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:04:02] Running /usr/bin/apptainer --version
[2025-11-25 04:04:02] apptainer version 1.4.1-1.1
[2025-11-25 04:04:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:04:02] thA331a
[2025-11-25 04:04:02] apptainer works
[2025-11-25 04:04:02] Set ATHENA_PROC_NUMBER=3
[2025-11-25 04:04:02] Set ATHENA_CORE_NUMBER=3
[2025-11-25 04:04:02] Starting ATLAS job with PandaID=6895325942
[2025-11-25 04:04:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:57:47]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:57:47] 2025-11-25 10:57:17,745 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:57:47] 2025-11-25 10:57:17,790 | INFO     | [payload] control thread has finished
[2025-11-25 11:57:47] 2025-11-25 10:57:17,905 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:57:47] 2025-11-25 10:57:17,922 | INFO     | [data] control thread has finished
[2025-11-25 11:57:47] 2025-11-25 10:57:18,123 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:57:47] 2025-11-25 10:57:18,143 | INFO     | [job] control thread has finished
[2025-11-25 11:57:47] 2025-11-25 10:57:18,370 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:57:47] 2025-11-25 10:57:18,482 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:57:47] 2025-11-25 10:57:18,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:57:47] 2025-11-25 10:57:18,852 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:57:47] 2025-11-25 10:57:18,898 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:57:47] 2025-11-25 10:57:22,688 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:57:47] 2025-11-25 10:57:40,164 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:57:47] 2025-11-25 10:57:41,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489794049856)>', '<ExcThread(monitor, started 140489302988544)>']
[2025-11-25 11:57:47] 2025-11-25 10:57:46,470 | INFO     | all workflow threads have been joined
[2025-11-25 11:57:47] 2025-11-25 10:57:46,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:57:47] 2025-11-25 10:57:46,470 | INFO     | traces error code: 0
[2025-11-25 11:57:47] 2025-11-25 10:57:46,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:57:47] 2025-11-25 10:57:47,175 | INFO     | PID=969080 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 11:57:47] 2025-11-25 10:57:47,176 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:57:47] 2025-11-25 10:57:47,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:57:47] 2025-11-25 10:57:47,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:57:47] 2025-11-25 10:57:47,176 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:57:47] 2025-11-25 10:57:47,176 | INFO     | [monitor] control thread has ended
[2025-11-25 11:57:47] 2025-11-25 10:57:47,222 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:57:47] 2025-11-25 10:57:47,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:57:47] 2025-11-25 10:57:47,227 [wrapper] pilotpid: 969080
[2025-11-25 11:57:47] 2025-11-25 10:57:47,229 [wrapper] Pilot exit status: 0
[2025-11-25 11:57:47] 2025-11-25 10:57:47,236 [wrapper] pandaids: 6895325942
[2025-11-25 11:57:47] 2025-11-25 10:57:47,252 [wrapper] cleanup supervisor_pilot 1026584 969081
[2025-11-25 11:57:47] 2025-11-25 10:57:47,254 [wrapper] Test setup, not cleaning
[2025-11-25 11:57:47] 2025-11-25 10:57:47,256 [wrapper] apfmon messages muted
[2025-11-25 11:57:47] 2025-11-25 10:57:47,259 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:57:47] 2025-11-25 10:57:47,261 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:57:47]  *** Error codes and diagnostics ***
[2025-11-25 11:57:47]     "exeErrorCode": 0,
[2025-11-25 11:57:47]     "exeErrorDiag": "",
[2025-11-25 11:57:47]     "pilotErrorCode": 0,
[2025-11-25 11:57:47]     "pilotErrorDiag": "",
[2025-11-25 11:57:47]  *** Listing of results directory ***
[2025-11-25 11:57:47] total 1296268
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc    576529 Nov 21 15:47 pilot3.tar.gz
[2025-11-25 11:57:47] -rwx------ 1 boinc boinc     36292 Nov 21 15:48 runpilot2-wrapper.sh
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc      5112 Nov 21 15:48 queuedata.json
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc       100 Nov 25 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:57:47] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 04:04 run_atlas
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc       105 Nov 25 04:04 job.xml
[2025-11-25 11:57:47] -rw-r--r-- 2 boinc boinc 409906706 Nov 25 04:04 EVNT.47483658._000036.pool.root.1
[2025-11-25 11:57:47] -rw-r--r-- 2 boinc boinc    590102 Nov 25 04:04 input.tar.gz
[2025-11-25 11:57:47] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:04 start_atlas.sh
[2025-11-25 11:57:47] drwxrwx--x 2 boinc boinc      4096 Nov 25 04:04 shared
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:04 boinc_setup_complete
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc      6442 Nov 25 04:04 init_data.xml
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:04 boinc_lockfile
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc      2783 Nov 25 04:04 pandaJob.out
[2025-11-25 11:57:47] -rw------- 1 boinc boinc    991801 Nov 25 04:04 agis_schedconf.cvmfs.json
[2025-11-25 11:57:47] drwx------ 5 boinc boinc      4096 Nov 25 04:04 pilot3
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc       531 Nov 25 11:54 boinc_task_state.xml
[2025-11-25 11:57:47] -rw------- 1 boinc boinc 903265658 Nov 25 11:56 HITS.47556137._000360.pool.root.1
[2025-11-25 11:57:47] -rw------- 1 boinc boinc      1025 Nov 25 11:57 memory_monitor_summary.json
[2025-11-25 11:57:47] -rw------- 1 boinc boinc   1516240 Nov 25 11:57 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:57:47] -rw------- 1 boinc boinc   1160378 Nov 25 11:57 log.47556137._000360.job.log.tgz.1
[2025-11-25 11:57:47] -rw------- 1 boinc boinc      8576 Nov 25 11:57 heartbeat.json
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc      8192 Nov 25 11:57 boinc_mmap_file
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc        28 Nov 25 11:57 wrapper_checkpoint.txt
[2025-11-25 11:57:47] -rw------- 1 boinc boinc       746 Nov 25 11:57 pilotlog.txt
[2025-11-25 11:57:47] -rw------- 1 boinc boinc        95 Nov 25 11:57 pilot_heartbeat.json
[2025-11-25 11:57:47] -rw------- 1 boinc boinc   3994243 Nov 25 11:57 log.47556137._000360.job.log.1
[2025-11-25 11:57:47] -rw------- 1 boinc boinc       353 Nov 25 11:57 output.list
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc       620 Nov 25 11:57 runtime_log
[2025-11-25 11:57:47] -rw------- 1 boinc boinc   5171200 Nov 25 11:57 result.tar.gz
[2025-11-25 11:57:47] -rw------- 1 boinc boinc       666 Nov 25 11:57 zyNODm8bhg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvgHKDmJOizGm.diag
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc      8903 Nov 25 11:57 runtime_log.err
[2025-11-25 11:57:47] -rw-r--r-- 1 boinc boinc      5935 Nov 25 11:57 stderr.txt
[2025-11-25 11:57:47] HITS file was successfully produced:
[2025-11-25 11:57:47] -rw------- 1 boinc boinc 903265658 Nov 25 11:56 shared/HITS.pool.root.1
[2025-11-25 11:57:47]  *** Contents of shared directory: ***
[2025-11-25 11:57:47] total 1288052
[2025-11-25 11:57:47] -rw-r--r-- 2 boinc boinc 409906706 Nov 25 04:04 ATLAS.root_0
[2025-11-25 11:57:47] -rw-r--r-- 2 boinc boinc    590102 Nov 25 04:04 input.tar.gz
[2025-11-25 11:57:47] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:04 start_atlas.sh
[2025-11-25 11:57:47] -rw------- 1 boinc boinc 903265658 Nov 25 11:56 HITS.pool.root.1
[2025-11-25 11:57:47] -rw------- 1 boinc boinc   5171200 Nov 25 11:57 result.tar.gz
11:57:48 (965359): run_atlas exited; CPU time 83828.909504
11:57:48 (965359): called boinc_finish(0)

</stderr_txt>
]]>

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