Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:29:20 (9254): wrapper (7.7.26015): starting
02:29:20 (9254): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 02:29:20] Arguments: --nthreads 8
[2025-11-25 02:29:20] Threads: 8
[2025-11-25 02:29:20] Checking for CVMFS
[2025-11-25 02:29:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:29:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:29:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:29:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:29:23] 2.11.2.0 14417 78638 95392 153265 2 230 17867216 25165825 4473 130560 11 23427743 99.882 13615229 1900 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 02:29:23] CVMFS is ok
[2025-11-25 02:29:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:29:23] Checking for apptainer binary...
[2025-11-25 02:29:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 02:29:23] Running /usr/bin/apptainer --version
[2025-11-25 02:29:23] apptainer version 1.3.2-1.el7
[2025-11-25 02:29:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:29:24] cg-vwn452.simple-grid.lan
[2025-11-25 02:29:24] apptainer works
[2025-11-25 02:29:24] Set ATHENA_PROC_NUMBER=8
[2025-11-25 02:29:24] Set ATHENA_CORE_NUMBER=8
[2025-11-25 02:29:24] Starting ATLAS job with PandaID=6894270937
[2025-11-25 02:29:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 04:26:12]  *** The last 200 lines of the pilot log: ***
[2025-11-26 04:26:12] 2025-11-26 03:25:23,276 | INFO     | monitor loop #6263: job 0:6894270937 is in state 'finished'
[2025-11-26 04:26:12] 2025-11-26 03:25:23,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:26:12] 2025-11-26 03:25:24,922 | INFO     | time since job start (93203s) is within the limit (172800.0s)
[2025-11-26 04:26:12] 2025-11-26 03:25:25,783 | INFO     | monitor loop #6264: job 0:6894270937 is in state 'finished'
[2025-11-26 04:26:12] 2025-11-26 03:25:25,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:26:12] 2025-11-26 03:25:26,933 | INFO     | time since job start (93205s) is within the limit (172800.0s)
[2025-11-26 04:26:12] 2025-11-26 03:25:28,293 | INFO     | monitor loop #6265: job 0:6894270937 is in state 'finished'
[2025-11-26 04:26:12] 2025-11-26 03:25:28,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:26:12] 2025-11-26 03:25:28,944 | INFO     | time since job start (93207s) is within the limit (172800.0s)
[2025-11-26 04:26:12] 2025-11-26 03:25:30,800 | INFO     | monitor loop #6266: job 0:6894270937 is in state 'finished'
[2025-11-26 04:26:12] 2025-11-26 03:25:30,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:26:12] 2025-11-26 03:25:30,954 | INFO     | time since job start (93209s) is within the limit (172800.0s)
[2025-11-26 04:26:12] 2025-11-26 03:25:32,961 | INFO     | time since job start (93211s) is within the limit (172800.0s)
[2025-11-26 04:26:12] 2025-11-26 03:25:33,311 | INFO     | monitor loop #6267: job 0:6894270937 is in state 'finished'
[2025-11-26 04:26:12] 2025-11-26 03:25:33,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 04:26:12] 2025-11-26 03:25:34,809 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 04:26:12] 2025-11-26 03:25:34,810 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 04:26:12] 2025-11-26 03:25:34,811 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6894270937/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 04:26:12] 2025-11-26 03:25:34,812 | INFO     | extracted standard info from prmon json
[2025-11-26 04:26:12] 2025-11-26 03:25:34,812 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 04:26:12] 2025-11-26 03:25:34,812 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 04:26:12] 2025-11-26 03:25:34,841 | INFO     | fitting pss+swap vs Time
[2025-11-26 04:26:12] 2025-11-26 03:25:34,844 | INFO     | sum of square deviations: 1084659952473.855
[2025-11-26 04:26:12] 2025-11-26 03:25:34,917 | INFO     | sum of deviations: 3870789783542.3037
[2025-11-26 04:26:12] 2025-11-26 03:25:34,918 | INFO     | mean x: 1764081117.7536232
[2025-11-26 04:26:12] 2025-11-26 03:25:34,918 | INFO     | mean y: 2839811.0355731226
[2025-11-26 04:26:12] 2025-11-26 03:25:34,918 | INFO     | intersect: -6292577616.672219
[2025-11-26 04:26:12] 2025-11-26 03:25:34,920 | INFO     | chi2: 28.843366220854435
[2025-11-26 04:26:12] 2025-11-26 03:25:34,922 | INFO     | sum of square deviations: 1073977811653.4703
[2025-11-26 04:26:12] 2025-11-26 03:25:34,970 | INFO     | time since job start (93213s) is within the limit (172800.0s)
[2025-11-26 04:26:12] 2025-11-26 03:25:35,000 | INFO     | sum of deviations: 4378969844718.5864
[2025-11-26 04:26:12] 2025-11-26 03:25:35,000 | INFO     | mean x: 1764080965.257766
[2025-11-26 04:26:12] 2025-11-26 03:25:35,000 | INFO     | mean y: 2847065.2267019167
[2025-11-26 04:26:12] 2025-11-26 03:25:35,000 | INFO     | intersect: -7189906143.159243
[2025-11-26 04:26:12] 2025-11-26 03:25:35,002 | INFO     | chi2: 25.53231009732792
[2025-11-26 04:26:12] 2025-11-26 03:25:35,002 | INFO     | current chi2=25.53231009732792 (change=11.479437241040694 %)
[2025-11-26 04:26:12] 2025-11-26 03:25:35,002 | INFO     | right removable region: 1512
[2025-11-26 04:26:12] 2025-11-26 03:25:35,004 | INFO     | sum of square deviations: 1073976650823.4697
[2025-11-26 04:26:12] 2025-11-26 03:25:35,072 | INFO     | sum of deviations: 3234003119944.7827
[2025-11-26 04:26:12] 2025-11-26 03:25:35,073 | INFO     | mean x: 1764081270.257766
[2025-11-26 04:26:12] 2025-11-26 03:25:35,073 | INFO     | mean y: 2848900.636483807
[2025-11-26 04:26:12] 2025-11-26 03:25:35,073 | INFO     | intersect: -5309225926.57269
[2025-11-26 04:26:12] 2025-11-26 03:25:35,075 | INFO     | chi2: 24.105542325011687
[2025-11-26 04:26:12] 2025-11-26 03:25:35,075 | INFO     | current chi2=24.105542325011687 (change=16.426043546946296 %)
[2025-11-26 04:26:12] 2025-11-26 03:25:35,075 | INFO     | left removable region: 10
[2025-11-26 04:26:12] 2025-11-26 03:25:35,077 | INFO     | sum of square deviations: 1050722167152.4425
[2025-11-26 04:26:12] 2025-11-26 03:25:35,142 | INFO     | sum of deviations: 3302339511656.393
[2025-11-26 04:26:12] 2025-11-26 03:25:35,143 | INFO     | mean x: 1764081239.7669773
[2025-11-26 04:26:12] 2025-11-26 03:25:35,143 | INFO     | mean y: 2865734.2296937415
[2025-11-26 04:26:12] 2025-11-26 03:25:35,143 | INFO     | intersect: -5541506852.523857
[2025-11-26 04:26:12] 2025-11-26 03:25:35,145 | INFO     | chi2: 16.582254110226124
[2025-11-26 04:26:12] 2025-11-26 03:25:35,145 | INFO     | current memory leak: 3.14 B/s (using 1502 data points, chi2=16.58)
[2025-11-26 04:26:12] 2025-11-26 03:25:35,146 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-26 04:26:12] 2025-11-26 03:25:35,146 | INFO     | ..............................
[2025-11-26 04:26:12] 2025-11-26 03:25:35,147 | INFO     | . Timing measurements:
[2025-11-26 04:26:12] 2025-11-26 03:25:35,147 | INFO     | . get job = 0 s
[2025-11-26 04:26:12] 2025-11-26 03:25:35,147 | INFO     | . initial setup = 6 s
[2025-11-26 04:26:12] 2025-11-26 03:25:35,147 | INFO     | . payload setup = 162 s
[2025-11-26 04:26:12] 2025-11-26 03:25:35,147 | INFO     | . stage-in = 0 s
[2025-11-26 04:26:12] 2025-11-26 03:25:35,147 | INFO     | . payload execution = 92737 s
[2025-11-26 04:26:12] 2025-11-26 03:25:35,147 | INFO     | . stage-out = 5 s
[2025-11-26 04:26:12] 2025-11-26 03:25:35,147 | INFO     | . log creation = 2 s
[2025-11-26 04:26:12] 2025-11-26 03:25:35,147 | INFO     | ..............................
[2025-11-26 04:26:12] 2025-11-26 03:25:35,637 | INFO     | 
[2025-11-26 04:26:12] 2025-11-26 03:25:35,637 | INFO     | job summary report
[2025-11-26 04:26:12] 2025-11-26 03:25:35,637 | INFO     | --------------------------------------------------
[2025-11-26 04:26:12] 2025-11-26 03:25:35,637 | INFO     | PanDA job id: 6894270937
[2025-11-26 04:26:12] 2025-11-26 03:25:35,637 | INFO     | task id: 47533967
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | errors: (none)
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | pilot state: finished 
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | transexitcode: 0
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | exeerrorcode: 0
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | exeerrordiag: 
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | exitcode: 0
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | exitmsg: OK
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | cpuconsumptiontime: 345649 s
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | nevents: 1000
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | neventsw: 0
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | pid: 19541
[2025-11-26 04:26:12] 2025-11-26 03:25:35,638 | INFO     | pgrp: 19541
[2025-11-26 04:26:12] 2025-11-26 03:25:35,639 | INFO     | corecount: 8
[2025-11-26 04:26:12] 2025-11-26 03:25:35,639 | INFO     | event service: False
[2025-11-26 04:26:12] 2025-11-26 03:25:35,639 | INFO     | sizes: {0: 2283481, 1: 2284166, 2: 2284365, 13: 2284365, 24: 2284421, 34: 2284449, 45: 2284605, 56: 2284633, 66: 2284661, 77: 2284689, 88: 2284745, 96: 2285315, 99
[2025-11-26 04:26:12] 2025-11-26 03:25:35,639 | INFO     | --------------------------------------------------
[2025-11-26 04:26:12] 2025-11-26 03:25:35,639 | INFO     | 
[2025-11-26 04:26:12] 2025-11-26 03:25:35,639 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-26 04:26:12] 2025-11-26 03:25:36,122 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,122 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,122 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,122 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,122 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,122 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,122 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,122 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,123 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,124 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 04:26:12] 2025-11-26 03:25:36,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,124 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 04:26:12] 2025-11-26 03:25:36,124 | INFO     | job 6894270937 has completed (purged errors)
[2025-11-26 04:26:12] 2025-11-26 03:25:36,124 | INFO     | overall cleanup function is called
[2025-11-26 04:26:12] 2025-11-26 03:25:37,147 | INFO     | --- collectZombieJob: --- 10, [19541]
[2025-11-26 04:26:12] 2025-11-26 03:25:37,147 | INFO     | zombie collector waiting for pid 19541
[2025-11-26 04:26:12] 2025-11-26 03:25:37,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 04:26:12] 2025-11-26 03:25:37,147 | INFO     | collected zombie processes
[2025-11-26 04:26:12] 2025-11-26 03:25:37,147 | INFO     | will attempt to kill all subprocesses of pid=19541
[2025-11-26 04:26:12] 2025-11-26 03:25:37,286 | INFO     | process IDs to be killed: [19541] (in reverse order)
[2025-11-26 04:26:12] 2025-11-26 03:25:38,052 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 04:26:12] 2025-11-26 03:25:38,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 04:26:12] 2025-11-26 03:25:38,056 | INFO     | did not find any defunct processes belonging to 19541
[2025-11-26 04:26:12] 2025-11-26 03:25:38,059 | INFO     | did not find any defunct processes belonging to 19541
[2025-11-26 04:26:12] 2025-11-26 03:25:38,082 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 04:26:12] 2025-11-26 03:25:38,082 | INFO     | ready for new job
[2025-11-26 04:26:12] 2025-11-26 03:25:38,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 04:26:12] 2025-11-26 03:25:38,088 | INFO     | ***************************************
[2025-11-26 04:26:12] 2025-11-26 03:25:38,089 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 04:26:12] 2025-11-26 03:25:38,089 | INFO     | ***************************************
[2025-11-26 04:26:12] 2025-11-26 03:25:38,089 | INFO     | 
[2025-11-26 04:26:12] 2025-11-26 03:25:38,089 | INFO     | pilot is running in a VM
[2025-11-26 04:26:12] 2025-11-26 03:25:38,090 | INFO     | architecture information:
[2025-11-26 04:26:12] 2025-11-26 03:25:38,091 | INFO     | executing command: cat /etc/os-release
[2025-11-26 04:26:12] 2025-11-26 03:25:38,255 | INFO     | cat /etc/os-release:
[2025-11-26 04:26:12] NAME="CentOS Linux"
[2025-11-26 04:26:12] VERSION="7 (Core)"
[2025-11-26 04:26:12] ID="centos"
[2025-11-26 04:26:12] ID_LIKE="rhel fedora"
[2025-11-26 04:26:12] VERSION_ID="7"
[2025-11-26 04:26:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 04:26:12] ANSI_COLOR="0;31"
[2025-11-26 04:26:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 04:26:12] HOME_URL="https://www.centos.org/"
[2025-11-26 04:26:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 04:26:12] 
[2025-11-26 04:26:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 04:26:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 04:26:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 04:26:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 04:26:12] 
[2025-11-26 04:26:12] 2025-11-26 03:25:38,256 | INFO     | ***************************************
[2025-11-26 04:26:12] 2025-11-26 03:25:38,759 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-26 04:26:12] 2025-11-26 03:25:38,880 | INFO     | sufficient remaining disk space (496082354176 B)
[2025-11-26 04:26:12] 2025-11-26 03:25:38,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 04:26:12] 2025-11-26 03:25:38,880 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 04:26:12] 2025-11-26 03:25:38,881 | INFO     | update_server=False
[2025-11-26 04:26:12] 2025-11-26 03:25:38,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 04:26:12] 2025-11-26 03:25:38,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 04:26:12] 2025-11-26 03:25:38,909 | INFO     | all job control threads have been joined
[2025-11-26 04:26:12] 2025-11-26 03:25:39,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:26:12] 2025-11-26 03:25:39,330 | INFO     | aborting loop
[2025-11-26 04:26:12] 2025-11-26 03:25:39,408 | INFO     | all data control threads have been joined
[2025-11-26 04:26:12] 2025-11-26 03:25:39,521 | INFO     | all payload control threads have been joined
[2025-11-26 04:26:12] 2025-11-26 03:25:39,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 04:26:12] 2025-11-26 03:25:39,887 | INFO     | [job] retrieve thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:39,915 | INFO     | [job] control thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:39,991 | INFO     | [data] copytool_in thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:40,232 | INFO     | [job] validate thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:40,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:26:12] 2025-11-26 03:25:40,337 | INFO     | [job] job monitor thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:40,414 | INFO     | [data] control thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:40,458 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:40,527 | INFO     | [payload] control thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:40,775 | INFO     | [payload] failed_post thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:40,948 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:41,170 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:41,215 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:41,274 | INFO     | [payload] validate_post thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:41,276 | INFO     | [job] queue monitor thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:41,871 | INFO     | [data] copytool_out thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:42,897 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 04:26:12] 2025-11-26 03:25:43,947 | INFO     | [monitor] cgroup control has ended
[2025-11-26 04:26:12] 2025-11-26 03:25:44,384 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328955262784)>', '<ExcThread(monitor, started 140328233322240)>']
[2025-11-26 04:26:12] 2025-11-26 03:25:49,410 | INFO     | all workflow threads have been joined
[2025-11-26 04:26:12] 2025-11-26 03:25:49,410 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 04:26:12] 2025-11-26 03:25:49,411 | INFO     | traces error code: 0
[2025-11-26 04:26:12] 2025-11-26 03:25:49,411 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 04:26:12] 2025-11-26 03:26:08,170 | INFO     | PID=12989 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 04:26:12] 2025-11-26 03:26:08,170 | INFO     | .. there are 9 such processes running
[2025-11-26 04:26:12] 2025-11-26 03:26:08,170 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 04:26:12] 2025-11-26 03:26:08,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 04:26:12] 2025-11-26 03:26:08,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 04:26:12] 2025-11-26 03:26:08,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 04:26:12] 2025-11-26 03:26:08,171 | INFO     | [monitor] control thread has ended
[2025-11-26 04:26:12] 2025-11-26 03:26:08,526 [wrapper] ==== pilot stdout END ====
[2025-11-26 04:26:12] 2025-11-26 03:26:08,630 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 04:26:12] 2025-11-26 03:26:08,731 [wrapper] pilotpid: 12989
[2025-11-26 04:26:12] 2025-11-26 03:26:08,835 [wrapper] Pilot exit status: 0
[2025-11-26 04:26:12] 2025-11-26 03:26:09,244 [wrapper] pandaids: 6894270937
[2025-11-26 04:26:12] 2025-11-26 03:26:09,977 [wrapper] cleanup supervisor_pilot  4445 12990
[2025-11-26 04:26:12] 2025-11-26 03:26:10,020 [wrapper] Test setup, not cleaning
[2025-11-26 04:26:12] 2025-11-26 03:26:10,136 [wrapper] apfmon messages muted
[2025-11-26 04:26:12] 2025-11-26 03:26:10,286 [wrapper] ==== wrapper stdout END ====
[2025-11-26 04:26:12] 2025-11-26 03:26:10,367 [wrapper] ==== wrapper stderr END ====
[2025-11-26 04:26:12]  *** Error codes and diagnostics ***
[2025-11-26 04:26:12]     "exeErrorCode": 0,
[2025-11-26 04:26:12]     "exeErrorDiag": "",
[2025-11-26 04:26:12]     "pilotErrorCode": 0,
[2025-11-26 04:26:12]     "pilotErrorDiag": "",
[2025-11-26 04:26:12]  *** Listing of results directory ***
[2025-11-26 04:26:12] total 1344488
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc    576529 Nov 21 08:02 pilot3.tar.gz
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc      5112 Nov 21 08:07 queuedata.json
[2025-11-26 04:26:12] -rwx------. 1 boinc boinc     36292 Nov 21 08:07 runpilot2-wrapper.sh
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc       100 Nov 25 02:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 04:26:12] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 02:29 run_atlas
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc       105 Nov 25 02:29 job.xml
[2025-11-26 04:26:12] -rw-r--r--. 2 boinc boinc 409054317 Nov 25 02:29 EVNT.47493127._002291.pool.root.1
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc      6391 Nov 25 02:29 init_data.xml
[2025-11-26 04:26:12] -rw-r--r--. 2 boinc boinc     15847 Nov 25 02:29 start_atlas.sh
[2025-11-26 04:26:12] drwxrwx--x. 2 boinc boinc        68 Nov 25 02:29 shared
[2025-11-26 04:26:12] -rw-r--r--. 2 boinc boinc    590104 Nov 25 02:29 input.tar.gz
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc         0 Nov 25 02:29 boinc_lockfile
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc      2785 Nov 25 02:29 pandaJob.out
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc    991801 Nov 25 02:31 agis_schedconf.cvmfs.json
[2025-11-26 04:26:12] drwx------. 5 boinc boinc      4096 Nov 25 02:32 pilot3
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc       533 Nov 26 03:59 boinc_task_state.xml
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc 933835444 Nov 26 04:22 HITS.47533967._002628.pool.root.1
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc      1031 Nov 26 04:23 memory_monitor_summary.json
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc   1516240 Nov 26 04:23 agis_ddmendpoints.agis.ALL.json
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc   2568484 Nov 26 04:23 log.47533967._002628.job.log.tgz.1
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc        95 Nov 26 04:25 pilot_heartbeat.json
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc      7948 Nov 26 04:25 heartbeat.json
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc       820 Nov 26 04:26 pilotlog.txt
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc      8192 Nov 26 04:26 boinc_mmap_file
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc        29 Nov 26 04:26 wrapper_checkpoint.txt
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc  12417922 Nov 26 04:26 log.47533967._002628.job.log.1
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc       353 Nov 26 04:26 output.list
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc       620 Nov 26 04:26 runtime_log
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc  15001600 Nov 26 04:26 result.tar.gz
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc      8817 Nov 26 04:26 runtime_log.err
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc       662 Nov 26 04:26 rs3LDmEQag8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOQHKDmvhDSEo.diag
[2025-11-26 04:26:12] -rw-r--r--. 1 boinc boinc     21442 Nov 26 04:26 stderr.txt
[2025-11-26 04:26:12] HITS file was successfully produced:
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc 933835444 Nov 26 04:22 shared/HITS.pool.root.1
[2025-11-26 04:26:12]  *** Contents of shared directory: ***
[2025-11-26 04:26:12] total 1326668
[2025-11-26 04:26:12] -rw-r--r--. 2 boinc boinc 409054317 Nov 25 02:29 ATLAS.root_0
[2025-11-26 04:26:12] -rw-r--r--. 2 boinc boinc     15847 Nov 25 02:29 start_atlas.sh
[2025-11-26 04:26:12] -rw-r--r--. 2 boinc boinc    590104 Nov 25 02:29 input.tar.gz
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc 933835444 Nov 26 04:22 HITS.pool.root.1
[2025-11-26 04:26:12] -rw-------. 1 boinc boinc  15001600 Nov 26 04:26 result.tar.gz
04:26:14 (9254): run_atlas exited; CPU time 346244.286046
04:26:14 (9254): called boinc_finish(0)

</stderr_txt>
]]>

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