Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:04:03 (822): wrapper (7.7.26015): starting
07:04:03 (822): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 07:04:03] Arguments: --nthreads 8
[2025-11-22 07:04:03] Threads: 8
[2025-11-22 07:04:03] Checking for CVMFS
[2025-11-22 07:04:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 07:04:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 07:04:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 07:04:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 07:04:03] 2.11.2.0 2877 53254 80968 153171 4 1 20051014 20275201 1 130560 0 12034503 99.879 2517744 27006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 07:04:03] CVMFS is ok
[2025-11-22 07:04:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 07:04:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 07:04:03] Further information can be found at the LHC@home message board.
[2025-11-22 07:04:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 07:04:03] Checking for apptainer binary...
[2025-11-22 07:04:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 07:04:03] Running /usr/bin/apptainer --version
[2025-11-22 07:04:04] apptainer version 1.3.2-1.el7
[2025-11-22 07:04:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 07:04:05] c-204-32.aglt2.org
[2025-11-22 07:04:05] apptainer works
[2025-11-22 07:04:05] Set ATHENA_PROC_NUMBER=8
[2025-11-22 07:04:05] Set ATHENA_CORE_NUMBER=8
[2025-11-22 07:04:05] Starting ATLAS job with PandaID=6894252700
[2025-11-22 07:04:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 19:28:07]  *** The last 200 lines of the pilot log: ***
[2025-11-22 19:28:07] 2025-11-23 00:27:31,812 | INFO     | monitor loop #3274: job 0:6894252700 is in state 'finished'
[2025-11-22 19:28:07] 2025-11-23 00:27:31,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:28:07] 2025-11-23 00:27:33,468 | INFO     | time since job start (44590s) is within the limit (172800.0s)
[2025-11-22 19:28:07] 2025-11-23 00:27:33,469 | INFO     | 44592s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-22 19:28:07] 2025-11-23 00:27:34,002 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 19:28:07] 2025-11-23 00:27:34,005 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1779.0
[2025-11-22 19:28:07] 2025-11-23 00:27:34,006 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894252700/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 19:28:07] 2025-11-23 00:27:34,007 | INFO     | extracted standard info from prmon json
[2025-11-22 19:28:07] 2025-11-23 00:27:34,008 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 19:28:07] 2025-11-23 00:27:34,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 19:28:07] 2025-11-23 00:27:34,020 | INFO     | fitting pss+swap vs Time
[2025-11-22 19:28:07] 2025-11-23 00:27:34,020 | INFO     | sum of square deviations: 121124260750.10495
[2025-11-22 19:28:07] 2025-11-23 00:27:34,031 | INFO     | sum of deviations: 897945362695.4606
[2025-11-22 19:28:07] 2025-11-23 00:27:34,031 | INFO     | mean x: 1763835361.608755
[2025-11-22 19:28:07] 2025-11-23 00:27:34,032 | INFO     | mean y: 3252715.4281805744
[2025-11-22 19:28:07] 2025-11-23 00:27:34,032 | INFO     | intersect: -13072804663.221125
[2025-11-22 19:28:07] 2025-11-23 00:27:34,032 | INFO     | chi2: 6.5599270713957605
[2025-11-22 19:28:07] 2025-11-23 00:27:34,033 | INFO     | sum of square deviations: 118655912980.73817
[2025-11-22 19:28:07] 2025-11-23 00:27:34,044 | INFO     | sum of deviations: 1206846655448.3875
[2025-11-22 19:28:07] 2025-11-23 00:27:34,044 | INFO     | mean x: 1763835209.1129477
[2025-11-22 19:28:07] 2025-11-23 00:27:34,045 | INFO     | mean y: 3271802.958677686
[2025-11-22 19:28:07] 2025-11-23 00:27:34,045 | INFO     | intersect: -17936656932.20367
[2025-11-22 19:28:07] 2025-11-23 00:27:34,045 | INFO     | chi2: 2.7547658706672262
[2025-11-22 19:28:07] 2025-11-23 00:27:34,046 | INFO     | current chi2=2.7547658706672262 (change=58.00615097263433 %)
[2025-11-22 19:28:07] 2025-11-23 00:27:34,046 | INFO     | sum of square deviations: 116221289244.57983
[2025-11-22 19:28:07] 2025-11-23 00:27:34,057 | INFO     | sum of deviations: 1231856349949.6084
[2025-11-22 19:28:07] 2025-11-23 00:27:34,057 | INFO     | mean x: 1763835056.6158113
[2025-11-22 19:28:07] 2025-11-23 00:27:34,057 | INFO     | mean y: 3273360.771151179
[2025-11-22 19:28:07] 2025-11-23 00:27:34,058 | INFO     | intersect: -18692022732.386288
[2025-11-22 19:28:07] 2025-11-23 00:27:34,058 | INFO     | chi2: 2.627854415410182
[2025-11-22 19:28:07] 2025-11-23 00:27:34,058 | INFO     | current chi2=2.627854415410182 (change=4.606977914471741 %)
[2025-11-22 19:28:07] 2025-11-23 00:27:34,059 | INFO     | right removable region: 720
[2025-11-22 19:28:07] 2025-11-23 00:27:34,059 | INFO     | sum of square deviations: 118655641530.73817
[2025-11-22 19:28:07] 2025-11-23 00:27:34,070 | INFO     | sum of deviations: 663834349515.9011
[2025-11-22 19:28:07] 2025-11-23 00:27:34,070 | INFO     | mean x: 1763835514.1129477
[2025-11-22 19:28:07] 2025-11-23 00:27:34,071 | INFO     | mean y: 3267153.5743801654
[2025-11-22 19:28:07] 2025-11-23 00:27:34,071 | INFO     | intersect: -9864739003.224234
[2025-11-22 19:28:07] 2025-11-23 00:27:34,071 | INFO     | chi2: 4.135720972470434
[2025-11-22 19:28:07] 2025-11-23 00:27:34,072 | INFO     | current chi2=4.135720972470434 (change=36.954772096414885 %)
[2025-11-22 19:28:07] 2025-11-23 00:27:34,072 | INFO     | sum of square deviations: 116220834428.57994
[2025-11-22 19:28:07] 2025-11-23 00:27:34,083 | INFO     | sum of deviations: 616952860545.4492
[2025-11-22 19:28:07] 2025-11-23 00:27:34,083 | INFO     | mean x: 1763835666.6158113
[2025-11-22 19:28:07] 2025-11-23 00:27:34,083 | INFO     | mean y: 3270088.539528433
[2025-11-22 19:28:07] 2025-11-23 00:27:34,083 | INFO     | intersect: -9359969001.94762
[2025-11-22 19:28:07] 2025-11-23 00:27:34,084 | INFO     | chi2: 4.097737106111123
[2025-11-22 19:28:07] 2025-11-23 00:27:34,084 | INFO     | current chi2=4.097737106111123 (change=0.9184339710573306 %)
[2025-11-22 19:28:07] 2025-11-23 00:27:34,084 | INFO     | left removable region: 20
[2025-11-22 19:28:07] 2025-11-23 00:27:34,085 | INFO     | sum of square deviations: 106358643134.4282
[2025-11-22 19:28:07] 2025-11-23 00:27:34,095 | INFO     | sum of deviations: 864032943226.1566
[2025-11-22 19:28:07] 2025-11-23 00:27:34,096 | INFO     | mean x: 1763835636.1285715
[2025-11-22 19:28:07] 2025-11-23 00:27:34,096 | INFO     | mean y: 3296586.6871428574
[2025-11-22 19:28:07] 2025-11-23 00:27:34,096 | INFO     | intersect: -14325694938.008495
[2025-11-22 19:28:07] 2025-11-23 00:27:34,097 | INFO     | chi2: 0.08050752610246281
[2025-11-22 19:28:07] 2025-11-23 00:27:34,097 | INFO     | current memory leak: 8.12 B/s (using 700 data points, chi2=0.08)
[2025-11-22 19:28:07] 2025-11-23 00:27:34,097 | INFO     | could have reported an average CPU frequency of 2181 MHz (28 samples)
[2025-11-22 19:28:07] 2025-11-23 00:27:34,098 | INFO     | ..............................
[2025-11-22 19:28:07] 2025-11-23 00:27:34,098 | INFO     | . Timing measurements:
[2025-11-22 19:28:07] 2025-11-23 00:27:34,098 | INFO     | . get job = 0 s
[2025-11-22 19:28:07] 2025-11-23 00:27:34,098 | INFO     | . initial setup = 2 s
[2025-11-22 19:28:07] 2025-11-23 00:27:34,098 | INFO     | . payload setup = 9 s
[2025-11-22 19:28:07] 2025-11-23 00:27:34,098 | INFO     | . stage-in = 0 s
[2025-11-22 19:28:07] 2025-11-23 00:27:34,098 | INFO     | . payload execution = 44547 s
[2025-11-22 19:28:07] 2025-11-23 00:27:34,098 | INFO     | . stage-out = 3 s
[2025-11-22 19:28:07] 2025-11-23 00:27:34,099 | INFO     | . log creation = 0 s
[2025-11-22 19:28:07] 2025-11-23 00:27:34,099 | INFO     | ..............................
[2025-11-22 19:28:07] 2025-11-23 00:27:34,191 | INFO     | 
[2025-11-22 19:28:07] 2025-11-23 00:27:34,192 | INFO     | job summary report
[2025-11-22 19:28:07] 2025-11-23 00:27:34,192 | INFO     | --------------------------------------------------
[2025-11-22 19:28:07] 2025-11-23 00:27:34,192 | INFO     | PanDA job id: 6894252700
[2025-11-22 19:28:07] 2025-11-23 00:27:34,192 | INFO     | task id: 47533967
[2025-11-22 19:28:07] 2025-11-23 00:27:34,192 | INFO     | errors: (none)
[2025-11-22 19:28:07] 2025-11-23 00:27:34,192 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 19:28:07] 2025-11-23 00:27:34,192 | INFO     | pilot state: finished 
[2025-11-22 19:28:07] 2025-11-23 00:27:34,192 | INFO     | transexitcode: 0
[2025-11-22 19:28:07] 2025-11-23 00:27:34,193 | INFO     | exeerrorcode: 0
[2025-11-22 19:28:07] 2025-11-23 00:27:34,193 | INFO     | exeerrordiag: 
[2025-11-22 19:28:07] 2025-11-23 00:27:34,193 | INFO     | exitcode: 0
[2025-11-22 19:28:07] 2025-11-23 00:27:34,193 | INFO     | exitmsg: OK
[2025-11-22 19:28:07] 2025-11-23 00:27:34,193 | INFO     | cpuconsumptiontime: 346966 s
[2025-11-22 19:28:07] 2025-11-23 00:27:34,193 | INFO     | nevents: 1000
[2025-11-22 19:28:07] 2025-11-23 00:27:34,193 | INFO     | neventsw: 0
[2025-11-22 19:28:07] 2025-11-23 00:27:34,193 | INFO     | pid: 12826
[2025-11-22 19:28:07] 2025-11-23 00:27:34,193 | INFO     | pgrp: 12826
[2025-11-22 19:28:07] 2025-11-23 00:27:34,194 | INFO     | corecount: 8
[2025-11-22 19:28:07] 2025-11-23 00:27:34,194 | INFO     | event service: False
[2025-11-22 19:28:07] 2025-11-23 00:27:34,194 | INFO     | sizes: {0: 2298634, 1: 2298833, 7: 2299095, 12: 2299123, 44560: 2344880, 44564: 2354058, 44573: 2354248}
[2025-11-22 19:28:07] 2025-11-23 00:27:34,194 | INFO     | --------------------------------------------------
[2025-11-22 19:28:07] 2025-11-23 00:27:34,194 | INFO     | 
[2025-11-22 19:28:07] 2025-11-23 00:27:34,194 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 19:28:07] 2025-11-23 00:27:34,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,222 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,222 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,223 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,223 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,223 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,223 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,224 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,224 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,224 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 19:28:07] 2025-11-23 00:27:34,224 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,225 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 19:28:07] 2025-11-23 00:27:34,225 | INFO     | job 6894252700 has completed (purged errors)
[2025-11-22 19:28:07] 2025-11-23 00:27:34,225 | INFO     | overall cleanup function is called
[2025-11-22 19:28:07] 2025-11-23 00:27:35,241 | INFO     | --- collectZombieJob: --- 10, [12826]
[2025-11-22 19:28:07] 2025-11-23 00:27:35,241 | INFO     | zombie collector waiting for pid 12826
[2025-11-22 19:28:07] 2025-11-23 00:27:35,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 19:28:07] 2025-11-23 00:27:35,242 | INFO     | collected zombie processes
[2025-11-22 19:28:07] 2025-11-23 00:27:35,242 | INFO     | will attempt to kill all subprocesses of pid=12826
[2025-11-22 19:28:07] 2025-11-23 00:27:35,334 | INFO     | process IDs to be killed: [12826] (in reverse order)
[2025-11-22 19:28:07] 2025-11-23 00:27:35,391 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 19:28:07] 2025-11-23 00:27:35,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 19:28:07] 2025-11-23 00:27:35,395 | INFO     | did not find any defunct processes belonging to 12826
[2025-11-22 19:28:07] 2025-11-23 00:27:35,398 | INFO     | did not find any defunct processes belonging to 12826
[2025-11-22 19:28:07] 2025-11-23 00:27:35,400 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 19:28:07] 2025-11-23 00:27:35,401 | INFO     | ready for new job
[2025-11-22 19:28:07] 2025-11-23 00:27:35,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 19:28:07] 2025-11-23 00:27:35,404 | INFO     | ***************************************
[2025-11-22 19:28:07] 2025-11-23 00:27:35,404 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 19:28:07] 2025-11-23 00:27:35,405 | INFO     | ***************************************
[2025-11-22 19:28:07] 2025-11-23 00:27:35,405 | INFO     | 
[2025-11-22 19:28:07] 2025-11-23 00:27:35,405 | INFO     | architecture information:
[2025-11-22 19:28:07] 2025-11-23 00:27:35,406 | INFO     | executing command: cat /etc/os-release
[2025-11-22 19:28:07] 2025-11-23 00:27:35,424 | INFO     | cat /etc/os-release:
[2025-11-22 19:28:07] NAME="CentOS Linux"
[2025-11-22 19:28:07] VERSION="7 (Core)"
[2025-11-22 19:28:07] ID="centos"
[2025-11-22 19:28:07] ID_LIKE="rhel fedora"
[2025-11-22 19:28:07] VERSION_ID="7"
[2025-11-22 19:28:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 19:28:07] ANSI_COLOR="0;31"
[2025-11-22 19:28:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 19:28:07] HOME_URL="https://www.centos.org/"
[2025-11-22 19:28:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 19:28:07] 
[2025-11-22 19:28:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 19:28:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 19:28:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 19:28:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 19:28:07] 
[2025-11-22 19:28:07] 2025-11-23 00:27:35,425 | INFO     | ***************************************
[2025-11-22 19:28:07] 2025-11-23 00:27:35,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 19:28:07] 2025-11-23 00:27:35,947 | INFO     | sufficient remaining disk space (17434673152 B)
[2025-11-22 19:28:07] 2025-11-23 00:27:35,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 19:28:07] 2025-11-23 00:27:35,948 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 19:28:07] 2025-11-23 00:27:35,948 | INFO     | update_server=False
[2025-11-22 19:28:07] 2025-11-23 00:27:35,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 19:28:07] 2025-11-23 00:27:35,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 19:28:07] 2025-11-23 00:27:35,949 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 19:28:07] 2025-11-23 00:27:35,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:28:07] 2025-11-23 00:27:35,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:28:07] 2025-11-23 00:27:35,950 | INFO     | aborting loop
[2025-11-22 19:28:07] 2025-11-23 00:27:36,051 | INFO     | all payload control threads have been joined
[2025-11-22 19:28:07] 2025-11-23 00:27:36,862 | INFO     | all data control threads have been joined
[2025-11-22 19:28:07] 2025-11-23 00:27:36,951 | INFO     | [job] retrieve thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:36,956 | INFO     | [job] queue monitor thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:36,956 | INFO     | [job] job monitor thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:36,976 | INFO     | all job control threads have been joined
[2025-11-22 19:28:07] 2025-11-23 00:27:37,057 | INFO     | [payload] control thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:37,074 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:37,113 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:37,280 | INFO     | [job] validate thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:37,281 | INFO     | [data] copytool_in thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:37,324 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:37,603 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:37,619 | INFO     | [monitor] cgroup control has ended
[2025-11-22 19:28:07] 2025-11-23 00:27:37,868 | INFO     | [data] control thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:37,956 | INFO     | [data] copytool_out thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:37,979 | INFO     | [job] control thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:38,186 | INFO     | [payload] validate_post thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:38,282 | INFO     | [payload] failed_post thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:39,956 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 19:28:07] 2025-11-23 00:27:41,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140021065148224)>', '<ExcThread(monitor, started 140020480464640)>']
[2025-11-22 19:28:07] 2025-11-23 00:27:46,170 | INFO     | all workflow threads have been joined
[2025-11-22 19:28:07] 2025-11-23 00:27:46,170 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 19:28:07] 2025-11-23 00:27:46,171 | INFO     | traces error code: 0
[2025-11-22 19:28:07] 2025-11-23 00:27:46,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 19:28:07] 2025-11-23 00:28:06,689 | INFO     | PID=5634 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 19:28:07] 2025-11-23 00:28:06,690 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 19:28:07] 2025-11-23 00:28:06,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 19:28:07] 2025-11-23 00:28:06,690 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 19:28:07] 2025-11-23 00:28:06,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 19:28:07] 2025-11-23 00:28:06,690 | INFO     | [monitor] control thread has ended
[2025-11-22 19:28:07] 2025-11-23 00:28:06,800 [wrapper] ==== pilot stdout END ====
[2025-11-22 19:28:07] 2025-11-23 00:28:06,805 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 19:28:07] 2025-11-23 00:28:06,810 [wrapper] pilotpid: 5634
[2025-11-22 19:28:07] 2025-11-23 00:28:06,814 [wrapper] Pilot exit status: 0
[2025-11-22 19:28:07] 2025-11-23 00:28:06,830 [wrapper] pandaids: 6894252700
[2025-11-22 19:28:07] 2025-11-23 00:28:06,877 [wrapper] cleanup supervisor_pilot  5746 5635
[2025-11-22 19:28:07] 2025-11-23 00:28:06,883 [wrapper] Test setup, not cleaning
[2025-11-22 19:28:07] 2025-11-23 00:28:06,888 [wrapper] apfmon messages muted
[2025-11-22 19:28:07] 2025-11-23 00:28:06,893 [wrapper] ==== wrapper stdout END ====
[2025-11-22 19:28:07] 2025-11-23 00:28:06,898 [wrapper] ==== wrapper stderr END ====
[2025-11-22 19:28:07]  *** Error codes and diagnostics ***
[2025-11-22 19:28:07]     "exeErrorCode": 0,
[2025-11-22 19:28:07]     "exeErrorDiag": "",
[2025-11-22 19:28:07]     "pilotErrorCode": 0,
[2025-11-22 19:28:07]     "pilotErrorDiag": "",
[2025-11-22 19:28:07]  *** Listing of results directory ***
[2025-11-22 19:28:07] total 1310352
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 20:54 pilot3.tar.gz
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 21:02 queuedata.json
[2025-11-22 19:28:07] -rwx------ 1 boincer umatlas     36292 Nov 20 21:03 runpilot2-wrapper.sh
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas       100 Nov 22 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 19:28:07] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 07:04 run_atlas
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas       105 Nov 22 07:04 job.xml
[2025-11-22 19:28:07] -rw-r--r-- 2 boincer umatlas 410221767 Nov 22 07:04 EVNT.47493127._002114.pool.root.1
[2025-11-22 19:28:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 07:04 start_atlas.sh
[2025-11-22 19:28:07] drwxrwx--x 2 boincer umatlas      4096 Nov 22 07:04 shared
[2025-11-22 19:28:07] -rw-r--r-- 2 boincer umatlas    590104 Nov 22 07:04 input.tar.gz
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas         0 Nov 22 07:04 boinc_lockfile
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas      2785 Nov 22 07:04 pandaJob.out
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas        57 Nov 22 07:04 setup.sh.local
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas    989768 Nov 22 07:04 agis_schedconf.cvmfs.json
[2025-11-22 19:28:07] drwx------ 5 boincer umatlas      4096 Nov 22 07:04 pilot3
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas      5912 Nov 22 19:18 init_data.xml
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas       533 Nov 22 19:20 boinc_task_state.xml
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas 911375090 Nov 22 19:26 HITS.47533967._000859.pool.root.1
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas      1062 Nov 22 19:27 memory_monitor_summary.json
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas   1526164 Nov 22 19:27 agis_ddmendpoints.agis.ALL.json
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas   1988789 Nov 22 19:27 log.47533967._000859.job.log.tgz.1
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas        95 Nov 22 19:27 pilot_heartbeat.json
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas      8673 Nov 22 19:27 heartbeat.json
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 19:27 boinc_mmap_file
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas        29 Nov 22 19:27 wrapper_checkpoint.txt
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas       744 Nov 22 19:28 pilotlog.txt
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas   6150675 Nov 22 19:28 log.47533967._000859.job.log.1
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas       353 Nov 22 19:28 output.list
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas       620 Nov 22 19:28 runtime_log
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas   8161280 Nov 22 19:28 result.tar.gz
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 19:28 runtime_log.err
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas       668 Nov 22 19:28 4IVKDmifVg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwrIKDmCdolDo.diag
[2025-11-22 19:28:07] -rw-r--r-- 1 boincer umatlas     21308 Nov 22 19:28 stderr.txt
[2025-11-22 19:28:07] HITS file was successfully produced:
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas 911375090 Nov 22 19:26 shared/HITS.pool.root.1
[2025-11-22 19:28:07]  *** Contents of shared directory: ***
[2025-11-22 19:28:07] total 1299200
[2025-11-22 19:28:07] -rw-r--r-- 2 boincer umatlas 410221767 Nov 22 07:04 ATLAS.root_0
[2025-11-22 19:28:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 07:04 start_atlas.sh
[2025-11-22 19:28:07] -rw-r--r-- 2 boincer umatlas    590104 Nov 22 07:04 input.tar.gz
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas 911375090 Nov 22 19:26 HITS.pool.root.1
[2025-11-22 19:28:07] -rw------- 1 boincer umatlas   8161280 Nov 22 19:28 result.tar.gz
19:28:08 (822): run_atlas exited; CPU time 344585.188317
19:28:08 (822): called boinc_finish(0)

</stderr_txt>
]]>

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