Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
14:57:32 (1142960): wrapper (7.7.26015): starting
14:57:32 (1142960): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 14:57:32] Arguments: --nthreads 4
[2025-11-22 14:57:32] Threads: 4
[2025-11-22 14:57:32] Checking for CVMFS
[2025-11-22 14:57:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 14:57:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 14:57:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 14:57:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 14:57:32] 2.13.2.0 489841 498 68760 153183 1 81 2618656 4096000 3326 130560 0 1742445 99.710 308253 1398 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-22 14:57:32] CVMFS is ok
[2025-11-22 14:57:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 14:57:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-22 14:57:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-22 14:57:32] Further information can be found at the LHC@home message board.
[2025-11-22 14:57:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 14:57:32] Checking for apptainer binary...
[2025-11-22 14:57:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 14:57:32] Running /usr/bin/apptainer --version
[2025-11-22 14:57:32] apptainer version 1.4.3
[2025-11-22 14:57:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 14:57:32] SETI64-Ubuntu
[2025-11-22 14:57:32] apptainer works
[2025-11-22 14:57:32] Set ATHENA_PROC_NUMBER=4
[2025-11-22 14:57:32] Set ATHENA_CORE_NUMBER=4
[2025-11-22 14:57:32] Starting ATLAS job with PandaID=6895325324
[2025-11-22 14:57:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 00:01:42]  *** The last 200 lines of the pilot log: ***
[2025-11-23 00:01:42] 2025-11-23 05:01:08,961 | INFO     | fitting pss+swap vs Time
[2025-11-23 00:01:42] 2025-11-23 05:01:08,962 | INFO     | sum of square deviations: 47217248097.5
[2025-11-23 00:01:42] 2025-11-23 05:01:08,966 | INFO     | sum of deviations: 415183532467.5
[2025-11-23 00:01:42] 2025-11-23 05:01:08,966 | INFO     | mean x: 1763857742.5
[2025-11-23 00:01:42] 2025-11-23 05:01:08,966 | INFO     | mean y: 2231707.713483146
[2025-11-23 00:01:42] 2025-11-23 05:01:08,966 | INFO     | intersect: -15507454218.690056
[2025-11-23 00:01:42] 2025-11-23 05:01:08,966 | INFO     | chi2: 6.37063014740103
[2025-11-23 00:01:42] 2025-11-23 05:01:08,967 | INFO     | sum of square deviations: 45903297880.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,971 | INFO     | sum of deviations: 498264333299.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,971 | INFO     | mean x: 1763857590.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,971 | INFO     | mean y: 2241319.767485822
[2025-11-23 00:01:42] 2025-11-23 05:01:08,971 | INFO     | intersect: -19143819349.19051
[2025-11-23 00:01:42] 2025-11-23 05:01:08,972 | INFO     | chi2: 4.655225451957709
[2025-11-23 00:01:42] 2025-11-23 05:01:08,972 | INFO     | current chi2=4.655225451957709 (change=26.926766359888898 %)
[2025-11-23 00:01:42] 2025-11-23 05:01:08,972 | INFO     | sum of square deviations: 44613952775.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,976 | INFO     | sum of deviations: 491220602421.0001
[2025-11-23 00:01:42] 2025-11-23 05:01:08,976 | INFO     | mean x: 1763857437.5
[2025-11-23 00:01:42] 2025-11-23 05:01:08,976 | INFO     | mean y: 2240486.7251908397
[2025-11-23 00:01:42] 2025-11-23 05:01:08,977 | INFO     | intersect: -19418659459.155285
[2025-11-23 00:01:42] 2025-11-23 05:01:08,977 | INFO     | chi2: 4.653287119838659
[2025-11-23 00:01:42] 2025-11-23 05:01:08,977 | INFO     | current chi2=4.653287119838659 (change=0.041637771125248774 %)
[2025-11-23 00:01:42] 2025-11-23 05:01:08,977 | INFO     | right removable region: 523
[2025-11-23 00:01:42] 2025-11-23 05:01:08,978 | INFO     | sum of square deviations: 45903297880.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,982 | INFO     | sum of deviations: 278732550696.99994
[2025-11-23 00:01:42] 2025-11-23 05:01:08,983 | INFO     | mean x: 1763857895.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,983 | INFO     | mean y: 2247534.474480151
[2025-11-23 00:01:42] 2025-11-23 05:01:08,983 | INFO     | intersect: -10708194478.333492
[2025-11-23 00:01:42] 2025-11-23 05:01:08,983 | INFO     | chi2: 3.4694040113473252
[2025-11-23 00:01:42] 2025-11-23 05:01:08,983 | INFO     | current chi2=3.4694040113473252 (change=45.54064619866989 %)
[2025-11-23 00:01:42] 2025-11-23 05:01:08,984 | INFO     | sum of square deviations: 44613952775.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,988 | INFO     | sum of deviations: 172903114202.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,988 | INFO     | mean x: 1763858047.5
[2025-11-23 00:01:42] 2025-11-23 05:01:08,988 | INFO     | mean y: 2260046.045801527
[2025-11-23 00:01:42] 2025-11-23 05:01:08,988 | INFO     | intersect: -6833640618.508332
[2025-11-23 00:01:42] 2025-11-23 05:01:08,989 | INFO     | chi2: 1.8378798076996408
[2025-11-23 00:01:42] 2025-11-23 05:01:08,989 | INFO     | current chi2=1.8378798076996408 (change=47.026065523400675 %)
[2025-11-23 00:01:42] 2025-11-23 05:01:08,989 | INFO     | sum of square deviations: 43348980220.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,993 | INFO     | sum of deviations: 153882674861.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,993 | INFO     | mean x: 1763858200.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,993 | INFO     | mean y: 2262336.400770713
[2025-11-23 00:01:42] 2025-11-23 05:01:08,993 | INFO     | intersect: -6259181797.094204
[2025-11-23 00:01:42] 2025-11-23 05:01:08,994 | INFO     | chi2: 1.806955435245846
[2025-11-23 00:01:42] 2025-11-23 05:01:08,994 | INFO     | current chi2=1.806955435245846 (change=1.6826112526096564 %)
[2025-11-23 00:01:42] 2025-11-23 05:01:08,994 | INFO     | left removable region: 30
[2025-11-23 00:01:42] 2025-11-23 05:01:08,994 | INFO     | sum of square deviations: 37155011062.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,998 | INFO     | sum of deviations: 192959716257.00006
[2025-11-23 00:01:42] 2025-11-23 05:01:08,998 | INFO     | mean x: 1763858322.0
[2025-11-23 00:01:42] 2025-11-23 05:01:08,998 | INFO     | mean y: 2276965.7606490874
[2025-11-23 00:01:42] 2025-11-23 05:01:08,998 | INFO     | intersect: -9158091759.812475
[2025-11-23 00:01:42] 2025-11-23 05:01:08,998 | INFO     | chi2: 0.03527943188761835
[2025-11-23 00:01:42] 2025-11-23 05:01:08,999 | INFO     | current memory leak: 5.19 B/s (using 493 data points, chi2=0.04)
[2025-11-23 00:01:42] 2025-11-23 05:01:08,999 | INFO     | could have reported an average CPU frequency of 2349 MHz (22 samples)
[2025-11-23 00:01:42] 2025-11-23 05:01:08,999 | INFO     | ..............................
[2025-11-23 00:01:42] 2025-11-23 05:01:08,999 | INFO     | . Timing measurements:
[2025-11-23 00:01:42] 2025-11-23 05:01:08,999 | INFO     | . get job = 0 s
[2025-11-23 00:01:42] 2025-11-23 05:01:08,999 | INFO     | . initial setup = 3 s
[2025-11-23 00:01:42] 2025-11-23 05:01:08,999 | INFO     | . payload setup = 5 s
[2025-11-23 00:01:42] 2025-11-23 05:01:08,999 | INFO     | . stage-in = 0 s
[2025-11-23 00:01:42] 2025-11-23 05:01:08,999 | INFO     | . payload execution = 32572 s
[2025-11-23 00:01:42] 2025-11-23 05:01:09,000 | INFO     | . stage-out = 4 s
[2025-11-23 00:01:42] 2025-11-23 05:01:09,000 | INFO     | . log creation = 0 s
[2025-11-23 00:01:42] 2025-11-23 05:01:09,000 | INFO     | ..............................
[2025-11-23 00:01:42] 2025-11-23 05:01:09,171 | INFO     | 
[2025-11-23 00:01:42] 2025-11-23 05:01:09,171 | INFO     | job summary report
[2025-11-23 00:01:42] 2025-11-23 05:01:09,171 | INFO     | --------------------------------------------------
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | PanDA job id: 6895325324
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | task id: 47556137
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | errors: (none)
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | pilot state: finished 
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | transexitcode: 0
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | exeerrorcode: 0
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | exeerrordiag: 
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | exitcode: 0
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | exitmsg: OK
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | cpuconsumptiontime: 127911 s
[2025-11-23 00:01:42] 2025-11-23 05:01:09,172 | INFO     | nevents: 1000
[2025-11-23 00:01:42] 2025-11-23 05:01:09,173 | INFO     | neventsw: 0
[2025-11-23 00:01:42] 2025-11-23 05:01:09,173 | INFO     | pid: 1165766
[2025-11-23 00:01:42] 2025-11-23 05:01:09,173 | INFO     | pgrp: 1165766
[2025-11-23 00:01:42] 2025-11-23 05:01:09,173 | INFO     | corecount: 4
[2025-11-23 00:01:42] 2025-11-23 05:01:09,173 | INFO     | event service: False
[2025-11-23 00:01:42] 2025-11-23 05:01:09,173 | INFO     | sizes: {0: 2298646, 1: 2298845, 4: 2299107, 11: 2299135, 32581: 2338866, 32585: 2347888, 32586: 2348072, 32591: 2348318}
[2025-11-23 00:01:42] 2025-11-23 05:01:09,173 | INFO     | --------------------------------------------------
[2025-11-23 00:01:42] 2025-11-23 05:01:09,173 | INFO     | 
[2025-11-23 00:01:42] 2025-11-23 05:01:09,173 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/9
[2025-11-23 00:01:42] 2025-11-23 05:01:09,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,193 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 00:01:42] 2025-11-23 05:01:09,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,194 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 00:01:42] 2025-11-23 05:01:09,194 | INFO     | job 6895325324 has completed (purged errors)
[2025-11-23 00:01:42] 2025-11-23 05:01:09,194 | INFO     | overall cleanup function is called
[2025-11-23 00:01:42] 2025-11-23 05:01:10,206 | INFO     | --- collectZombieJob: --- 10, [1165766]
[2025-11-23 00:01:42] 2025-11-23 05:01:10,206 | INFO     | zombie collector waiting for pid 1165766
[2025-11-23 00:01:42] 2025-11-23 05:01:10,206 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 00:01:42] 2025-11-23 05:01:10,206 | INFO     | collected zombie processes
[2025-11-23 00:01:42] 2025-11-23 05:01:10,206 | INFO     | will attempt to kill all subprocesses of pid=1165766
[2025-11-23 00:01:42] 2025-11-23 05:01:10,532 | INFO     | process IDs to be killed: [1165766] (in reverse order)
[2025-11-23 00:01:42] 2025-11-23 05:01:10,645 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 00:01:42] 2025-11-23 05:01:10,646 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 00:01:42] 2025-11-23 05:01:10,658 | INFO     | did not find any defunct processes belonging to 1165766
[2025-11-23 00:01:42] 2025-11-23 05:01:10,669 | INFO     | did not find any defunct processes belonging to 1165766
[2025-11-23 00:01:42] 2025-11-23 05:01:10,671 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 00:01:42] 2025-11-23 05:01:10,671 | INFO     | ready for new job
[2025-11-23 00:01:42] 2025-11-23 05:01:10,671 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 00:01:42] 2025-11-23 05:01:10,674 | INFO     | ***************************************
[2025-11-23 00:01:42] 2025-11-23 05:01:10,674 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 00:01:42] 2025-11-23 05:01:10,674 | INFO     | ***************************************
[2025-11-23 00:01:42] 2025-11-23 05:01:10,675 | INFO     | 
[2025-11-23 00:01:42] 2025-11-23 05:01:10,683 | INFO     | architecture information:
[2025-11-23 00:01:42] 2025-11-23 05:01:10,683 | INFO     | executing command: cat /etc/os-release
[2025-11-23 00:01:42] 2025-11-23 05:01:10,698 | INFO     | cat /etc/os-release:
[2025-11-23 00:01:42] NAME="CentOS Linux"
[2025-11-23 00:01:42] VERSION="7 (Core)"
[2025-11-23 00:01:42] ID="centos"
[2025-11-23 00:01:42] ID_LIKE="rhel fedora"
[2025-11-23 00:01:42] VERSION_ID="7"
[2025-11-23 00:01:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 00:01:42] ANSI_COLOR="0;31"
[2025-11-23 00:01:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 00:01:42] HOME_URL="https://www.centos.org/"
[2025-11-23 00:01:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 00:01:42] 
[2025-11-23 00:01:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 00:01:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 00:01:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 00:01:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 00:01:42] 
[2025-11-23 00:01:42] 2025-11-23 05:01:10,698 | INFO     | ***************************************
[2025-11-23 00:01:42] 2025-11-23 05:01:11,200 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/9
[2025-11-23 00:01:42] 2025-11-23 05:01:11,213 | INFO     | sufficient remaining disk space (369066246144 B)
[2025-11-23 00:01:42] 2025-11-23 05:01:11,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 00:01:42] 2025-11-23 05:01:11,214 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 00:01:42] 2025-11-23 05:01:11,214 | INFO     | update_server=False
[2025-11-23 00:01:42] 2025-11-23 05:01:11,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 00:01:42] 2025-11-23 05:01:11,214 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 00:01:42] 2025-11-23 05:01:11,298 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 00:01:42] 2025-11-23 05:01:11,298 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 00:01:42] 2025-11-23 05:01:11,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:01:42] 2025-11-23 05:01:11,298 | INFO     | will abort loop
[2025-11-23 00:01:42] 2025-11-23 05:01:11,659 | INFO     | all job control threads have been joined
[2025-11-23 00:01:42] 2025-11-23 05:01:12,219 | INFO     | [job] retrieve thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:12,295 | INFO     | all data control threads have been joined
[2025-11-23 00:01:42] 2025-11-23 05:01:12,304 | INFO     | [job] job monitor thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:12,417 | INFO     | all payload control threads have been joined
[2025-11-23 00:01:42] 2025-11-23 05:01:12,664 | INFO     | [job] control thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:12,759 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:12,848 | INFO     | [payload] failed_post thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:12,983 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:12,987 | INFO     | [job] validate thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:13,145 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:13,149 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:13,220 | INFO     | [data] copytool_out thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:13,300 | INFO     | [data] control thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:13,423 | INFO     | [payload] control thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:13,658 | INFO     | [data] copytool_in thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:13,756 | INFO     | [payload] validate_post thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:14,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:01:42] 2025-11-23 05:01:14,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 00:01:42] 2025-11-23 05:01:15,062 | INFO     | [job] queue monitor thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:18,513 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 00:01:42] 2025-11-23 05:01:27,735 | INFO     | [monitor] cgroup control has ended
[2025-11-23 00:01:42] 2025-11-23 05:01:29,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126755671758656)>', '<ExcThread(monitor, started 126754769311488)>']
[2025-11-23 00:01:42] 2025-11-23 05:01:34,664 | INFO     | all workflow threads have been joined
[2025-11-23 00:01:42] 2025-11-23 05:01:34,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 00:01:42] 2025-11-23 05:01:34,665 | INFO     | traces error code: 0
[2025-11-23 00:01:42] 2025-11-23 05:01:34,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 00:01:42] 2025-11-23 05:01:41,931 | INFO     | PID=1151188 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 00:01:42] 2025-11-23 05:01:41,931 | INFO     | .. there are 7 such processes running
[2025-11-23 00:01:42] 2025-11-23 05:01:41,932 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 00:01:42] 2025-11-23 05:01:41,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 00:01:42] 2025-11-23 05:01:41,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 00:01:42] 2025-11-23 05:01:41,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 00:01:42] 2025-11-23 05:01:41,932 | INFO     | [monitor] control thread has ended
[2025-11-23 00:01:42] 2025-11-23 05:01:42,066 [wrapper] ==== pilot stdout END ====
[2025-11-23 00:01:42] 2025-11-23 05:01:42,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 00:01:42] 2025-11-23 05:01:42,073 [wrapper] pilotpid: 1151188
[2025-11-23 00:01:42] 2025-11-23 05:01:42,076 [wrapper] Pilot exit status: 0
[2025-11-23 00:01:42] 2025-11-23 05:01:42,087 [wrapper] pandaids: 6895325324
[2025-11-23 00:01:42] 2025-11-23 05:01:42,189 [wrapper] cleanup supervisor_pilot 1662308 1151189
[2025-11-23 00:01:42] 2025-11-23 05:01:42,192 [wrapper] Test setup, not cleaning
[2025-11-23 00:01:42] 2025-11-23 05:01:42,195 [wrapper] apfmon messages muted
[2025-11-23 00:01:42] 2025-11-23 05:01:42,199 [wrapper] ==== wrapper stdout END ====
[2025-11-23 00:01:42] 2025-11-23 05:01:42,201 [wrapper] ==== wrapper stderr END ====
[2025-11-23 00:01:42]  *** Error codes and diagnostics ***
[2025-11-23 00:01:42]     "exeErrorCode": 0,
[2025-11-23 00:01:42]     "exeErrorDiag": "",
[2025-11-23 00:01:42]     "pilotErrorCode": 0,
[2025-11-23 00:01:42]     "pilotErrorDiag": "",
[2025-11-23 00:01:42]  *** Listing of results directory ***
[2025-11-23 00:01:42] total 1307080
[2025-11-23 00:01:42] -rw-r--r-- 1 whitlerd whitlerd    576529 Nov 21 09:24 pilot3.tar.gz
[2025-11-23 00:01:42] -rwx------ 1 whitlerd whitlerd     36292 Nov 21 09:40 runpilot2-wrapper.sh
[2025-11-23 00:01:42] -rw-r--r-- 1 whitlerd whitlerd      5112 Nov 21 09:40 queuedata.json
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd       100 Nov 22 14:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 00:01:42] -rwxr-xr-x 1 whitlerd whitlerd      7986 Nov 22 14:57 run_atlas
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd       105 Nov 22 14:57 job.xml
[2025-11-23 00:01:42] -rw-r--r-- 2 whitlerd whitlerd 408891296 Nov 22 14:57 EVNT.47483658._000032.pool.root.1
[2025-11-23 00:01:42] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 14:57 start_atlas.sh
[2025-11-23 00:01:42] drwxrwx--x 2 whitlerd whitlerd      4096 Nov 22 14:57 shared
[2025-11-23 00:01:42] -rw-r--r-- 2 whitlerd whitlerd    590098 Nov 22 14:57 input.tar.gz
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd      9474 Nov 22 14:57 init_data.xml
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 14:57 boinc_setup_complete
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 14:57 boinc_lockfile
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd      2784 Nov 22 14:57 pandaJob.out
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd    989768 Nov 22 14:57 agis_schedconf.cvmfs.json
[2025-11-23 00:01:42] drwx------ 5 whitlerd whitlerd      4096 Nov 22 14:57 pilot3
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd       532 Nov 22 23:56 boinc_task_state.xml
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd 913723035 Nov 23 00:00 HITS.47556137._000316.pool.root.1
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd      1039 Nov 23 00:00 memory_monitor_summary.json
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd   1526164 Nov 23 00:01 agis_ddmendpoints.agis.ALL.json
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd   1355768 Nov 23 00:01 log.47556137._000316.job.log.tgz.1
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd      8570 Nov 23 00:01 heartbeat.json
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd      8192 Nov 23 00:01 boinc_mmap_file
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd        29 Nov 23 00:01 wrapper_checkpoint.txt
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd       822 Nov 23 00:01 pilotlog.txt
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd        95 Nov 23 00:01 pilot_heartbeat.json
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd   4600101 Nov 23 00:01 log.47556137._000316.job.log.1
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd       353 Nov 23 00:01 output.list
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd       620 Nov 23 00:01 runtime_log
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd   5980160 Nov 23 00:01 result.tar.gz
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd      9026 Nov 23 00:01 runtime_log.err
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd       659 Nov 23 00:01 NvoKDmwUhg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnUJKDmRk4DCo.diag
[2025-11-23 00:01:42] -rw-rw-r-- 1 whitlerd whitlerd     21158 Nov 23 00:01 stderr.txt
[2025-11-23 00:01:42] HITS file was successfully produced:
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd 913723035 Nov 23 00:00 shared/HITS.pool.root.1
[2025-11-23 00:01:42]  *** Contents of shared directory: ***
[2025-11-23 00:01:42] total 1298060
[2025-11-23 00:01:42] -rw-r--r-- 2 whitlerd whitlerd 408891296 Nov 22 14:57 ATLAS.root_0
[2025-11-23 00:01:42] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 14:57 start_atlas.sh
[2025-11-23 00:01:42] -rw-r--r-- 2 whitlerd whitlerd    590098 Nov 22 14:57 input.tar.gz
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd 913723035 Nov 23 00:00 HITS.pool.root.1
[2025-11-23 00:01:42] -rw------- 1 whitlerd whitlerd   5980160 Nov 23 00:01 result.tar.gz
00:01:43 (1142960): run_atlas exited; CPU time 128895.274888
00:01:43 (1142960): called boinc_finish(0)

</stderr_txt>
]]>

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