Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:38:41 (1471): wrapper (7.7.26015): starting
06:38:41 (1471): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 06:38:41] Arguments: --nthreads 12
[2025-11-22 06:38:41] Threads: 12
[2025-11-22 06:38:41] Checking for CVMFS
[2025-11-22 06:38:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 06:38:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 06:38:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 06:38:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 06:38:41] 2.11.2.0 2910 33092 96400 153170 1 82 13765075 20275201 1 130560 0 3541856 99.763 1536970 26026 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 06:38:41] CVMFS is ok
[2025-11-22 06:38:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 06:38:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 06:38:41] Further information can be found at the LHC@home message board.
[2025-11-22 06:38:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 06:38:41] Checking for apptainer binary...
[2025-11-22 06:38:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 06:38:41] Running /usr/bin/apptainer --version
[2025-11-22 06:38:41] apptainer version 1.3.2-1.el7
[2025-11-22 06:38:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 06:38:42] c-205-11.aglt2.org
[2025-11-22 06:38:42] apptainer works
[2025-11-22 06:38:43] Set ATHENA_PROC_NUMBER=12
[2025-11-22 06:38:43] Set ATHENA_CORE_NUMBER=12
[2025-11-22 06:38:43] Starting ATLAS job with PandaID=6895325308
[2025-11-22 06:38:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 13:28:45]  *** The last 200 lines of the pilot log: ***
[2025-11-22 13:28:45] 2025-11-22 18:27:42,229 | INFO     | monitor loop #1832: job 0:6895325308 is in state 'finished'
[2025-11-22 13:28:45] 2025-11-22 18:27:42,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 13:28:45] 2025-11-22 18:27:43,794 | INFO     | time since job start (24525s) is within the limit (172800.0s)
[2025-11-22 13:28:45] 2025-11-22 18:27:44,112 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 13:28:45] 2025-11-22 18:27:44,116 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-22 13:28:45] 2025-11-22 18:27:44,118 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895325308/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 13:28:45] 2025-11-22 18:27:44,119 | INFO     | extracted standard info from prmon json
[2025-11-22 13:28:45] 2025-11-22 18:27:44,119 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 13:28:45] 2025-11-22 18:27:44,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 13:28:45] 2025-11-22 18:27:44,126 | INFO     | fitting pss+swap vs Time
[2025-11-22 13:28:45] 2025-11-22 18:27:44,126 | INFO     | sum of square deviations: 20144350889.243637
[2025-11-22 13:28:45] 2025-11-22 18:27:44,130 | INFO     | sum of deviations: 299619413770.9956
[2025-11-22 13:28:45] 2025-11-22 18:27:44,130 | INFO     | mean x: 1763823798.681592
[2025-11-22 13:28:45] 2025-11-22 18:27:44,130 | INFO     | mean y: 4069110.9452736317
[2025-11-22 13:28:45] 2025-11-22 18:27:44,130 | INFO     | intersect: -26230375248.266933
[2025-11-22 13:28:45] 2025-11-22 18:27:44,131 | INFO     | chi2: 7.271703627462617
[2025-11-22 13:28:45] 2025-11-22 18:27:44,131 | INFO     | sum of square deviations: 19402024351.576756
[2025-11-22 13:28:45] 2025-11-22 18:27:44,135 | INFO     | sum of deviations: 507179146825.47845
[2025-11-22 13:28:45] 2025-11-22 18:27:44,135 | INFO     | mean x: 1763823646.1838791
[2025-11-22 13:28:45] 2025-11-22 18:27:44,135 | INFO     | mean y: 4111717.637279597
[2025-11-22 13:28:45] 2025-11-22 18:27:44,135 | INFO     | intersect: -46103168420.34711
[2025-11-22 13:28:45] 2025-11-22 18:27:44,136 | INFO     | chi2: 3.4977881194901657
[2025-11-22 13:28:45] 2025-11-22 18:27:44,136 | INFO     | current chi2=3.4977881194901657 (change=51.89864303214622 %)
[2025-11-22 13:28:45] 2025-11-22 18:27:44,136 | INFO     | sum of square deviations: 18678163276.4056
[2025-11-22 13:28:45] 2025-11-22 18:27:44,140 | INFO     | sum of deviations: 573733762718.1346
[2025-11-22 13:28:45] 2025-11-22 18:27:44,140 | INFO     | mean x: 1763823493.6862245
[2025-11-22 13:28:45] 2025-11-22 18:27:44,140 | INFO     | mean y: 4125667.8954081633
[2025-11-22 13:28:45] 2025-11-22 18:27:44,140 | INFO     | intersect: -54174921534.32953
[2025-11-22 13:28:45] 2025-11-22 18:27:44,140 | INFO     | chi2: 2.820002419365715
[2025-11-22 13:28:45] 2025-11-22 18:27:44,140 | INFO     | current chi2=2.820002419365715 (change=19.377551668945685 %)
[2025-11-22 13:28:45] 2025-11-22 18:27:44,141 | INFO     | right removable region: 391
[2025-11-22 13:28:45] 2025-11-22 18:27:44,141 | INFO     | sum of square deviations: 19401979821.576756
[2025-11-22 13:28:45] 2025-11-22 18:27:44,144 | INFO     | sum of deviations: 128941339230.71811
[2025-11-22 13:28:45] 2025-11-22 18:27:44,145 | INFO     | mean x: 1763823951.1838791
[2025-11-22 13:28:45] 2025-11-22 18:27:44,145 | INFO     | mean y: 4104076.4559193957
[2025-11-22 13:28:45] 2025-11-22 18:27:44,145 | INFO     | intersect: -11717886386.596909
[2025-11-22 13:28:45] 2025-11-22 18:27:44,145 | INFO     | chi2: 4.632828649866942
[2025-11-22 13:28:45] 2025-11-22 18:27:44,145 | INFO     | current chi2=4.632828649866942 (change=36.28963875300954 %)
[2025-11-22 13:28:45] 2025-11-22 18:27:44,146 | INFO     | sum of square deviations: 18678098310.77559
[2025-11-22 13:28:45] 2025-11-22 18:27:44,149 | INFO     | sum of deviations: 94014170213.17358
[2025-11-22 13:28:45] 2025-11-22 18:27:44,149 | INFO     | mean x: 1763824103.6836734
[2025-11-22 13:28:45] 2025-11-22 18:27:44,149 | INFO     | mean y: 4111423.823979592
[2025-11-22 13:28:45] 2025-11-22 18:27:44,150 | INFO     | intersect: -8873904782.684011
[2025-11-22 13:28:45] 2025-11-22 18:27:44,150 | INFO     | chi2: 4.5745155846697
[2025-11-22 13:28:45] 2025-11-22 18:27:44,150 | INFO     | current chi2=4.5745155846697 (change=1.2586924664031578 %)
[2025-11-22 13:28:45] 2025-11-22 18:27:44,150 | INFO     | left removable region: 20
[2025-11-22 13:28:45] 2025-11-22 18:27:44,151 | INFO     | sum of square deviations: 15834210721.412386
[2025-11-22 13:28:45] 2025-11-22 18:27:44,154 | INFO     | sum of deviations: 328912773467.1025
[2025-11-22 13:28:45] 2025-11-22 18:27:44,154 | INFO     | mean x: 1763824073.1913748
[2025-11-22 13:28:45] 2025-11-22 18:27:44,154 | INFO     | mean y: 4178283.4070080863
[2025-11-22 13:28:45] 2025-11-22 18:27:44,154 | INFO     | intersect: -36634482021.70662
[2025-11-22 13:28:45] 2025-11-22 18:27:44,155 | INFO     | chi2: 0.03859336632883324
[2025-11-22 13:28:45] 2025-11-22 18:27:44,155 | INFO     | current memory leak: 20.77 B/s (using 371 data points, chi2=0.04)
[2025-11-22 13:28:45] 2025-11-22 18:27:44,155 | INFO     | could have reported an average CPU frequency of 2399 MHz (17 samples)
[2025-11-22 13:28:45] 2025-11-22 18:27:44,156 | INFO     | ..............................
[2025-11-22 13:28:45] 2025-11-22 18:27:44,156 | INFO     | . Timing measurements:
[2025-11-22 13:28:45] 2025-11-22 18:27:44,156 | INFO     | . get job = 0 s
[2025-11-22 13:28:45] 2025-11-22 18:27:44,156 | INFO     | . initial setup = 2 s
[2025-11-22 13:28:45] 2025-11-22 18:27:44,156 | INFO     | . payload setup = 8 s
[2025-11-22 13:28:45] 2025-11-22 18:27:44,156 | INFO     | . stage-in = 0 s
[2025-11-22 13:28:45] 2025-11-22 18:27:44,156 | INFO     | . payload execution = 24491 s
[2025-11-22 13:28:45] 2025-11-22 18:27:44,156 | INFO     | . stage-out = 3 s
[2025-11-22 13:28:45] 2025-11-22 18:27:44,156 | INFO     | . log creation = 0 s
[2025-11-22 13:28:45] 2025-11-22 18:27:44,156 | INFO     | ..............................
[2025-11-22 13:28:45] 2025-11-22 18:27:44,245 | INFO     | 
[2025-11-22 13:28:45] 2025-11-22 18:27:44,245 | INFO     | job summary report
[2025-11-22 13:28:45] 2025-11-22 18:27:44,246 | INFO     | --------------------------------------------------
[2025-11-22 13:28:45] 2025-11-22 18:27:44,246 | INFO     | PanDA job id: 6895325308
[2025-11-22 13:28:45] 2025-11-22 18:27:44,246 | INFO     | task id: 47556137
[2025-11-22 13:28:45] 2025-11-22 18:27:44,246 | INFO     | errors: (none)
[2025-11-22 13:28:45] 2025-11-22 18:27:44,246 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 13:28:45] 2025-11-22 18:27:44,246 | INFO     | pilot state: finished 
[2025-11-22 13:28:45] 2025-11-22 18:27:44,246 | INFO     | transexitcode: 0
[2025-11-22 13:28:45] 2025-11-22 18:27:44,246 | INFO     | exeerrorcode: 0
[2025-11-22 13:28:45] 2025-11-22 18:27:44,246 | INFO     | exeerrordiag: 
[2025-11-22 13:28:45] 2025-11-22 18:27:44,246 | INFO     | exitcode: 0
[2025-11-22 13:28:45] 2025-11-22 18:27:44,247 | INFO     | exitmsg: OK
[2025-11-22 13:28:45] 2025-11-22 18:27:44,247 | INFO     | cpuconsumptiontime: 282587 s
[2025-11-22 13:28:45] 2025-11-22 18:27:44,247 | INFO     | nevents: 1000
[2025-11-22 13:28:45] 2025-11-22 18:27:44,247 | INFO     | neventsw: 0
[2025-11-22 13:28:45] 2025-11-22 18:27:44,247 | INFO     | pid: 11744
[2025-11-22 13:28:45] 2025-11-22 18:27:44,247 | INFO     | pgrp: 11744
[2025-11-22 13:28:45] 2025-11-22 18:27:44,247 | INFO     | corecount: 12
[2025-11-22 13:28:45] 2025-11-22 18:27:44,247 | INFO     | event service: False
[2025-11-22 13:28:45] 2025-11-22 18:27:44,247 | INFO     | sizes: {0: 2298581, 1: 2298780, 6: 2299042, 11: 2299070, 24500: 2335417, 24504: 2344595, 24510: 2344849}
[2025-11-22 13:28:45] 2025-11-22 18:27:44,248 | INFO     | --------------------------------------------------
[2025-11-22 13:28:45] 2025-11-22 18:27:44,248 | INFO     | 
[2025-11-22 13:28:45] 2025-11-22 18:27:44,248 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 13:28:45] 2025-11-22 18:27:44,274 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,274 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,275 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,275 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,277 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,277 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 13:28:45] 2025-11-22 18:27:44,277 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,277 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 13:28:45] 2025-11-22 18:27:44,278 | INFO     | job 6895325308 has completed (purged errors)
[2025-11-22 13:28:45] 2025-11-22 18:27:44,278 | INFO     | overall cleanup function is called
[2025-11-22 13:28:45] 2025-11-22 18:27:45,295 | INFO     | --- collectZombieJob: --- 10, [11744]
[2025-11-22 13:28:45] 2025-11-22 18:27:45,295 | INFO     | zombie collector waiting for pid 11744
[2025-11-22 13:28:45] 2025-11-22 18:27:45,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 13:28:45] 2025-11-22 18:27:45,296 | INFO     | collected zombie processes
[2025-11-22 13:28:45] 2025-11-22 18:27:45,296 | INFO     | will attempt to kill all subprocesses of pid=11744
[2025-11-22 13:28:45] 2025-11-22 18:27:45,385 | INFO     | process IDs to be killed: [11744] (in reverse order)
[2025-11-22 13:28:45] 2025-11-22 18:27:45,442 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 13:28:45] 2025-11-22 18:27:45,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 13:28:45] 2025-11-22 18:27:45,446 | INFO     | did not find any defunct processes belonging to 11744
[2025-11-22 13:28:45] 2025-11-22 18:27:45,449 | INFO     | did not find any defunct processes belonging to 11744
[2025-11-22 13:28:45] 2025-11-22 18:27:45,451 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 13:28:45] 2025-11-22 18:27:45,451 | INFO     | ready for new job
[2025-11-22 13:28:45] 2025-11-22 18:27:45,451 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 13:28:45] 2025-11-22 18:27:45,454 | INFO     | ***************************************
[2025-11-22 13:28:45] 2025-11-22 18:27:45,454 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 13:28:45] 2025-11-22 18:27:45,454 | INFO     | ***************************************
[2025-11-22 13:28:45] 2025-11-22 18:27:45,454 | INFO     | 
[2025-11-22 13:28:45] 2025-11-22 18:27:45,454 | INFO     | architecture information:
[2025-11-22 13:28:45] 2025-11-22 18:27:45,455 | INFO     | executing command: cat /etc/os-release
[2025-11-22 13:28:45] 2025-11-22 18:27:45,473 | INFO     | cat /etc/os-release:
[2025-11-22 13:28:45] NAME="CentOS Linux"
[2025-11-22 13:28:45] VERSION="7 (Core)"
[2025-11-22 13:28:45] ID="centos"
[2025-11-22 13:28:45] ID_LIKE="rhel fedora"
[2025-11-22 13:28:45] VERSION_ID="7"
[2025-11-22 13:28:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 13:28:45] ANSI_COLOR="0;31"
[2025-11-22 13:28:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 13:28:45] HOME_URL="https://www.centos.org/"
[2025-11-22 13:28:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 13:28:45] 
[2025-11-22 13:28:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 13:28:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 13:28:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 13:28:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 13:28:45] 
[2025-11-22 13:28:45] 2025-11-22 18:27:45,473 | INFO     | ***************************************
[2025-11-22 13:28:45] 2025-11-22 18:27:45,976 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 13:28:45] 2025-11-22 18:27:45,995 | INFO     | sufficient remaining disk space (28287434752 B)
[2025-11-22 13:28:45] 2025-11-22 18:27:45,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 13:28:45] 2025-11-22 18:27:45,999 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 13:28:45] 2025-11-22 18:27:45,999 | INFO     | update_server=False
[2025-11-22 13:28:45] 2025-11-22 18:27:45,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 13:28:45] 2025-11-22 18:27:45,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 13:28:45] 2025-11-22 18:27:46,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 13:28:45] 2025-11-22 18:27:46,000 | INFO     | aborting loop
[2025-11-22 13:28:45] 2025-11-22 18:27:46,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 13:28:45] 2025-11-22 18:27:46,577 | INFO     | all payload control threads have been joined
[2025-11-22 13:28:45] 2025-11-22 18:27:47,005 | INFO     | [job] retrieve thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:47,005 | INFO     | [job] queue monitor thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:47,006 | INFO     | [job] job monitor thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:47,064 | INFO     | all data control threads have been joined
[2025-11-22 13:28:45] 2025-11-22 18:27:47,188 | INFO     | all job control threads have been joined
[2025-11-22 13:28:45] 2025-11-22 18:27:47,309 | INFO     | [job] validate thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:47,409 | INFO     | [payload] validate_post thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:47,583 | INFO     | [payload] control thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:47,729 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:47,734 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:47,798 | INFO     | [payload] failed_post thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:47,862 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:48,067 | INFO     | [data] control thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:48,194 | INFO     | [job] control thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:48,214 | INFO     | [data] copytool_in thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:48,514 | INFO     | [data] copytool_out thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:49,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 13:28:45] 2025-11-22 18:27:53,089 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:27:56,290 | INFO     | job.realtimelogging is not enabled
[2025-11-22 13:28:45] 2025-11-22 18:27:57,295 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 13:28:45] 2025-11-22 18:28:16,994 | INFO     | PID=5334 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 13:28:45] 2025-11-22 18:28:16,994 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 13:28:45] 2025-11-22 18:28:16,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 13:28:45] 2025-11-22 18:28:16,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 13:28:45] 2025-11-22 18:28:38,388 | INFO     | [monitor] cgroup control has ended
[2025-11-22 13:28:45] 2025-11-22 18:28:40,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140026972272448)>', '<ExcThread(monitor, started 140026251826944)>']
[2025-11-22 13:28:45] 2025-11-22 18:28:41,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 13:28:45] 2025-11-22 18:28:41,105 | INFO     | [monitor] control thread has ended
[2025-11-22 13:28:45] 2025-11-22 18:28:45,154 | INFO     | all workflow threads have been joined
[2025-11-22 13:28:45] 2025-11-22 18:28:45,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 13:28:45] 2025-11-22 18:28:45,155 | INFO     | traces error code: 0
[2025-11-22 13:28:45] 2025-11-22 18:28:45,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 13:28:45] 2025-11-22 18:28:45,250 [wrapper] ==== pilot stdout END ====
[2025-11-22 13:28:45] 2025-11-22 18:28:45,254 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 13:28:45] 2025-11-22 18:28:45,257 [wrapper] pilotpid: 5334
[2025-11-22 13:28:45] 2025-11-22 18:28:45,261 [wrapper] Pilot exit status: 0
[2025-11-22 13:28:45] 2025-11-22 18:28:45,275 [wrapper] pandaids: 6895325308
[2025-11-22 13:28:45] 2025-11-22 18:28:45,326 [wrapper] cleanup supervisor_pilot 30606 5335
[2025-11-22 13:28:45] 2025-11-22 18:28:45,330 [wrapper] Test setup, not cleaning
[2025-11-22 13:28:45] 2025-11-22 18:28:45,334 [wrapper] apfmon messages muted
[2025-11-22 13:28:45] 2025-11-22 18:28:45,338 [wrapper] ==== wrapper stdout END ====
[2025-11-22 13:28:45] 2025-11-22 18:28:45,342 [wrapper] ==== wrapper stderr END ====
[2025-11-22 13:28:45]  *** Error codes and diagnostics ***
[2025-11-22 13:28:45]     "exeErrorCode": 0,
[2025-11-22 13:28:45]     "exeErrorDiag": "",
[2025-11-22 13:28:45]     "pilotErrorCode": 0,
[2025-11-22 13:28:45]     "pilotErrorDiag": "",
[2025-11-22 13:28:45]  *** Listing of results directory ***
[2025-11-22 13:28:45] total 1308804
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 09:24 pilot3.tar.gz
[2025-11-22 13:28:45] -rwx------ 1 boincer umatlas     36292 Nov 21 09:39 runpilot2-wrapper.sh
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 09:39 queuedata.json
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas       100 Nov 22 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 13:28:45] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 06:38 run_atlas
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas       105 Nov 22 06:38 job.xml
[2025-11-22 13:28:45] -rw-r--r-- 2 boincer umatlas 411501564 Nov 22 06:38 EVNT.47483658._000030.pool.root.1
[2025-11-22 13:28:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 06:38 start_atlas.sh
[2025-11-22 13:28:45] drwxrwx--x 2 boincer umatlas      4096 Nov 22 06:38 shared
[2025-11-22 13:28:45] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 06:38 input.tar.gz
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas         0 Nov 22 06:38 boinc_lockfile
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas      2783 Nov 22 06:38 pandaJob.out
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas    989768 Nov 22 06:38 agis_schedconf.cvmfs.json
[2025-11-22 13:28:45] drwx------ 5 boincer umatlas      4096 Nov 22 06:38 pilot3
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas       532 Nov 22 13:18 boinc_task_state.xml
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas      5870 Nov 22 13:19 init_data.xml
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas 913647320 Nov 22 13:27 HITS.47556137._000300.pool.root.1
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas      1060 Nov 22 13:27 memory_monitor_summary.json
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas   1526164 Nov 22 13:27 agis_ddmendpoints.agis.ALL.json
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas   2149020 Nov 22 13:27 log.47556137._000300.job.log.tgz.1
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas      8661 Nov 22 13:27 heartbeat.json
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 13:28 boinc_mmap_file
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas        29 Nov 22 13:28 wrapper_checkpoint.txt
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas        95 Nov 22 13:28 pilot_heartbeat.json
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas      4817 Nov 22 13:28 pilotlog.txt
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas   3425110 Nov 22 13:28 log.47556137._000300.job.log.1
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas       353 Nov 22 13:28 output.list
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas       620 Nov 22 13:28 runtime_log
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas   5591040 Nov 22 13:28 result.tar.gz
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas      8820 Nov 22 13:28 runtime_log.err
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas       669 Nov 22 13:28 HKHLDmFThg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiUJKDmcgjrAn.diag
[2025-11-22 13:28:45] -rw-r--r-- 1 boincer umatlas     21280 Nov 22 13:28 stderr.txt
[2025-11-22 13:28:45] HITS file was successfully produced:
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas 913647320 Nov 22 13:27 shared/HITS.pool.root.1
[2025-11-22 13:28:45]  *** Contents of shared directory: ***
[2025-11-22 13:28:45] total 1300156
[2025-11-22 13:28:45] -rw-r--r-- 2 boincer umatlas 411501564 Nov 22 06:38 ATLAS.root_0
[2025-11-22 13:28:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 06:38 start_atlas.sh
[2025-11-22 13:28:45] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 06:38 input.tar.gz
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas 913647320 Nov 22 13:27 HITS.pool.root.1
[2025-11-22 13:28:45] -rw------- 1 boincer umatlas   5591040 Nov 22 13:28 result.tar.gz
13:28:46 (1471): run_atlas exited; CPU time 279002.254439
13:28:46 (1471): called boinc_finish(0)

</stderr_txt>
]]>

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