Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
15:05:21 (1246470): wrapper (7.7.26015): starting
15:05:21 (1246470): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 15:05:21] Arguments: --nthreads 4
[2025-11-22 15:05:21] Threads: 4
[2025-11-22 15:05:21] Checking for CVMFS
[2025-11-22 15:05:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 15:05:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 15:05:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 15:05:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 15:05:22] 2.13.2.0 489841 506 64880 153183 1 89 2619721 4096001 3845 130560 0 2032255 99.751 308334 1382 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-22 15:05:22] CVMFS is ok
[2025-11-22 15:05:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 15:05:22] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-22 15:05:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-22 15:05:22] Further information can be found at the LHC@home message board.
[2025-11-22 15:05:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 15:05:22] Checking for apptainer binary...
[2025-11-22 15:05:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 15:05:22] Running /usr/bin/apptainer --version
[2025-11-22 15:05:22] apptainer version 1.4.3
[2025-11-22 15:05:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 15:05:22] SETI64-Ubuntu
[2025-11-22 15:05:22] apptainer works
[2025-11-22 15:05:22] Set ATHENA_PROC_NUMBER=4
[2025-11-22 15:05:22] Set ATHENA_CORE_NUMBER=4
[2025-11-22 15:05:22] Starting ATLAS job with PandaID=6895325935
[2025-11-22 15:05:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 00:19:25]  *** The last 200 lines of the pilot log: ***
[2025-11-23 00:19:25] 2025-11-23 05:18:48,279 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 00:19:25] 2025-11-23 05:18:48,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 00:19:25] 2025-11-23 05:18:48,285 | INFO     | fitting pss+swap vs Time
[2025-11-23 00:19:25] 2025-11-23 05:18:48,285 | INFO     | sum of square deviations: 49919894120.0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,290 | INFO     | sum of deviations: 359265170407.5
[2025-11-23 00:19:25] 2025-11-23 05:18:48,290 | INFO     | mean x: 1763858517.5
[2025-11-23 00:19:25] 2025-11-23 05:18:48,290 | INFO     | mean y: 2240933.9797794116
[2025-11-23 00:19:25] 2025-11-23 05:18:48,290 | INFO     | intersect: -12691955278.477207
[2025-11-23 00:19:25] 2025-11-23 05:18:48,290 | INFO     | chi2: 5.6977985246297695
[2025-11-23 00:19:25] 2025-11-23 05:18:48,291 | INFO     | sum of square deviations: 48556035990.0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,295 | INFO     | sum of deviations: 448385417758.99994
[2025-11-23 00:19:25] 2025-11-23 05:18:48,295 | INFO     | mean x: 1763858365.0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,295 | INFO     | mean y: 2250876.1094619664
[2025-11-23 00:19:25] 2025-11-23 05:18:48,295 | INFO     | intersect: -16285906790.243555
[2025-11-23 00:19:25] 2025-11-23 05:18:48,296 | INFO     | chi2: 4.054650811003472
[2025-11-23 00:19:25] 2025-11-23 05:18:48,296 | INFO     | current chi2=4.054650811003472 (change=28.838290903468994 %)
[2025-11-23 00:19:25] 2025-11-23 05:18:48,296 | INFO     | sum of square deviations: 47217248097.5
[2025-11-23 00:19:25] 2025-11-23 05:18:48,301 | INFO     | sum of deviations: 445038847836.9999
[2025-11-23 00:19:25] 2025-11-23 05:18:48,301 | INFO     | mean x: 1763858212.5
[2025-11-23 00:19:25] 2025-11-23 05:18:48,301 | INFO     | mean y: 2250492.299625468
[2025-11-23 00:19:25] 2025-11-23 05:18:48,301 | INFO     | intersect: -16622721488.65732
[2025-11-23 00:19:25] 2025-11-23 05:18:48,301 | INFO     | chi2: 4.044216884739317
[2025-11-23 00:19:25] 2025-11-23 05:18:48,301 | INFO     | current chi2=4.044216884739317 (change=0.2573323018554294 %)
[2025-11-23 00:19:25] 2025-11-23 05:18:48,301 | INFO     | right removable region: 533
[2025-11-23 00:19:25] 2025-11-23 05:18:48,302 | INFO     | sum of square deviations: 48556035990.0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,306 | INFO     | sum of deviations: 218881503325.99994
[2025-11-23 00:19:25] 2025-11-23 05:18:48,306 | INFO     | mean x: 1763858670.0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,306 | INFO     | mean y: 2256621.133580705
[2025-11-23 00:19:25] 2025-11-23 05:18:48,306 | INFO     | intersect: -7948887443.091724
[2025-11-23 00:19:25] 2025-11-23 05:18:48,307 | INFO     | chi2: 2.7697860258631235
[2025-11-23 00:19:25] 2025-11-23 05:18:48,307 | INFO     | current chi2=2.7697860258631235 (change=51.38848778365504 %)
[2025-11-23 00:19:25] 2025-11-23 05:18:48,307 | INFO     | sum of square deviations: 47217248097.5
[2025-11-23 00:19:25] 2025-11-23 05:18:48,311 | INFO     | sum of deviations: 144681372549.5
[2025-11-23 00:19:25] 2025-11-23 05:18:48,311 | INFO     | mean x: 1763858822.5
[2025-11-23 00:19:25] 2025-11-23 05:18:48,311 | INFO     | mean y: 2265048.661048689
[2025-11-23 00:19:25] 2025-11-23 05:18:48,311 | INFO     | intersect: -5402486937.220923
[2025-11-23 00:19:25] 2025-11-23 05:18:48,312 | INFO     | chi2: 1.7552120121692227
[2025-11-23 00:19:25] 2025-11-23 05:18:48,312 | INFO     | current chi2=1.7552120121692227 (change=36.630050271761995 %)
[2025-11-23 00:19:25] 2025-11-23 05:18:48,312 | INFO     | sum of square deviations: 45903297880.0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,317 | INFO     | sum of deviations: 129301182659.0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,317 | INFO     | mean x: 1763858975.0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,317 | INFO     | mean y: 2266833.289224953
[2025-11-23 00:19:25] 2025-11-23 05:18:48,317 | INFO     | intersect: -4966200837.757149
[2025-11-23 00:19:25] 2025-11-23 05:18:48,318 | INFO     | chi2: 1.738271640040006
[2025-11-23 00:19:25] 2025-11-23 05:18:48,318 | INFO     | current chi2=1.738271640040006 (change=0.9651467749631308 %)
[2025-11-23 00:19:25] 2025-11-23 05:18:48,318 | INFO     | left removable region: 30
[2025-11-23 00:19:25] 2025-11-23 05:18:48,318 | INFO     | sum of square deviations: 39462142692.0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,322 | INFO     | sum of deviations: 176542774911.00003
[2025-11-23 00:19:25] 2025-11-23 05:18:48,322 | INFO     | mean x: 1763859097.0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,322 | INFO     | mean y: 2282029.161033797
[2025-11-23 00:19:25] 2025-11-23 05:18:48,322 | INFO     | intersect: -7888738536.215385
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | chi2: 0.033394342517514636
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | current memory leak: 4.47 B/s (using 503 data points, chi2=0.03)
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | could have reported an average CPU frequency of 2277 MHz (22 samples)
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | ..............................
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | . Timing measurements:
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | . get job = 0 s
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | . initial setup = 4 s
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | . payload setup = 4 s
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | . stage-in = 0 s
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | . payload execution = 33164 s
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | . stage-out = 3 s
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | . log creation = 0 s
[2025-11-23 00:19:25] 2025-11-23 05:18:48,323 | INFO     | ..............................
[2025-11-23 00:19:25] 2025-11-23 05:18:48,640 | INFO     | 
[2025-11-23 00:19:25] 2025-11-23 05:18:48,640 | INFO     | job summary report
[2025-11-23 00:19:25] 2025-11-23 05:18:48,640 | INFO     | --------------------------------------------------
[2025-11-23 00:19:25] 2025-11-23 05:18:48,640 | INFO     | PanDA job id: 6895325935
[2025-11-23 00:19:25] 2025-11-23 05:18:48,640 | INFO     | task id: 47556137
[2025-11-23 00:19:25] 2025-11-23 05:18:48,640 | INFO     | errors: (none)
[2025-11-23 00:19:25] 2025-11-23 05:18:48,640 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 00:19:25] 2025-11-23 05:18:48,640 | INFO     | pilot state: finished 
[2025-11-23 00:19:25] 2025-11-23 05:18:48,640 | INFO     | transexitcode: 0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,640 | INFO     | exeerrorcode: 0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,640 | INFO     | exeerrordiag: 
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | exitcode: 0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | exitmsg: OK
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | cpuconsumptiontime: 130695 s
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | nevents: 1000
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | neventsw: 0
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | pid: 1258052
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | pgrp: 1258052
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | corecount: 4
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | event service: False
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | sizes: {0: 2298767, 3: 2299029, 11: 2299057, 33173: 2339001, 33176: 2348025, 33177: 2348081, 33181: 2348455}
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | --------------------------------------------------
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | 
[2025-11-23 00:19:25] 2025-11-23 05:18:48,641 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/13
[2025-11-23 00:19:25] 2025-11-23 05:18:48,659 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,661 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 00:19:25] 2025-11-23 05:18:48,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,661 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 00:19:25] 2025-11-23 05:18:48,661 | INFO     | job 6895325935 has completed (purged errors)
[2025-11-23 00:19:25] 2025-11-23 05:18:48,661 | INFO     | overall cleanup function is called
[2025-11-23 00:19:25] 2025-11-23 05:18:49,673 | INFO     | --- collectZombieJob: --- 10, [1258052]
[2025-11-23 00:19:25] 2025-11-23 05:18:49,673 | INFO     | zombie collector waiting for pid 1258052
[2025-11-23 00:19:25] 2025-11-23 05:18:49,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 00:19:25] 2025-11-23 05:18:49,674 | INFO     | collected zombie processes
[2025-11-23 00:19:25] 2025-11-23 05:18:49,674 | INFO     | will attempt to kill all subprocesses of pid=1258052
[2025-11-23 00:19:25] 2025-11-23 05:18:49,974 | INFO     | process IDs to be killed: [1258052] (in reverse order)
[2025-11-23 00:19:25] 2025-11-23 05:18:50,054 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 00:19:25] 2025-11-23 05:18:50,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 00:19:25] 2025-11-23 05:18:50,062 | INFO     | did not find any defunct processes belonging to 1258052
[2025-11-23 00:19:25] 2025-11-23 05:18:50,068 | INFO     | did not find any defunct processes belonging to 1258052
[2025-11-23 00:19:25] 2025-11-23 05:18:50,069 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 00:19:25] 2025-11-23 05:18:50,069 | INFO     | ready for new job
[2025-11-23 00:19:25] 2025-11-23 05:18:50,069 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 00:19:25] 2025-11-23 05:18:50,071 | INFO     | ***************************************
[2025-11-23 00:19:25] 2025-11-23 05:18:50,071 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 00:19:25] 2025-11-23 05:18:50,071 | INFO     | ***************************************
[2025-11-23 00:19:25] 2025-11-23 05:18:50,071 | INFO     | 
[2025-11-23 00:19:25] 2025-11-23 05:18:50,076 | INFO     | architecture information:
[2025-11-23 00:19:25] 2025-11-23 05:18:50,076 | INFO     | executing command: cat /etc/os-release
[2025-11-23 00:19:25] 2025-11-23 05:18:50,093 | INFO     | cat /etc/os-release:
[2025-11-23 00:19:25] NAME="CentOS Linux"
[2025-11-23 00:19:25] VERSION="7 (Core)"
[2025-11-23 00:19:25] ID="centos"
[2025-11-23 00:19:25] ID_LIKE="rhel fedora"
[2025-11-23 00:19:25] VERSION_ID="7"
[2025-11-23 00:19:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 00:19:25] ANSI_COLOR="0;31"
[2025-11-23 00:19:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 00:19:25] HOME_URL="https://www.centos.org/"
[2025-11-23 00:19:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 00:19:25] 
[2025-11-23 00:19:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 00:19:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 00:19:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 00:19:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 00:19:25] 
[2025-11-23 00:19:25] 2025-11-23 05:18:50,094 | INFO     | ***************************************
[2025-11-23 00:19:25] 2025-11-23 05:18:50,597 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/13
[2025-11-23 00:19:25] 2025-11-23 05:18:50,612 | INFO     | sufficient remaining disk space (377511477248 B)
[2025-11-23 00:19:25] 2025-11-23 05:18:50,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 00:19:25] 2025-11-23 05:18:50,613 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 00:19:25] 2025-11-23 05:18:50,613 | INFO     | update_server=False
[2025-11-23 00:19:25] 2025-11-23 05:18:50,613 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 00:19:25] 2025-11-23 05:18:50,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 00:19:25] 2025-11-23 05:18:50,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 00:19:25] 2025-11-23 05:18:50,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:19:25] 2025-11-23 05:18:50,614 | INFO     | aborting loop
[2025-11-23 00:19:25] 2025-11-23 05:18:50,878 | INFO     | all job control threads have been joined
[2025-11-23 00:19:25] 2025-11-23 05:18:51,375 | INFO     | all data control threads have been joined
[2025-11-23 00:19:25] 2025-11-23 05:18:51,517 | INFO     | all payload control threads have been joined
[2025-11-23 00:19:25] 2025-11-23 05:18:51,618 | INFO     | [job] retrieve thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:51,619 | INFO     | [job] job monitor thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:51,884 | INFO     | [job] control thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:52,021 | INFO     | [data] copytool_in thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:52,140 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:52,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:52,381 | INFO     | [data] control thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:52,523 | INFO     | [payload] control thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:52,524 | INFO     | [job] validate thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:52,618 | INFO     | [data] copytool_out thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:52,704 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:52,737 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:52,909 | INFO     | [payload] validate_post thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:53,147 | INFO     | [payload] failed_post thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:53,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:19:25] 2025-11-23 05:18:54,386 | INFO     | [job] queue monitor thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:18:54,620 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 00:19:25] 2025-11-23 05:19:19,707 | INFO     | [monitor] cgroup control has ended
[2025-11-23 00:19:25] 2025-11-23 05:19:20,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131345666774848)>', '<ExcThread(monitor, started 131345175004928)>']
[2025-11-23 00:19:25] 2025-11-23 05:19:21,031 | INFO     | PID=1250755 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 00:19:25] 2025-11-23 05:19:21,031 | INFO     | .. there are 4 such processes running
[2025-11-23 00:19:25] 2025-11-23 05:19:21,032 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 00:19:25] 2025-11-23 05:19:21,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 00:19:25] 2025-11-23 05:19:21,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 00:19:25] 2025-11-23 05:19:21,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 00:19:25] 2025-11-23 05:19:21,032 | INFO     | [monitor] control thread has ended
[2025-11-23 00:19:25] 2025-11-23 05:19:25,382 | INFO     | all workflow threads have been joined
[2025-11-23 00:19:25] 2025-11-23 05:19:25,382 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 00:19:25] 2025-11-23 05:19:25,383 | INFO     | traces error code: 0
[2025-11-23 00:19:25] 2025-11-23 05:19:25,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 00:19:25] 2025-11-23 05:19:25,466 [wrapper] ==== pilot stdout END ====
[2025-11-23 00:19:25] 2025-11-23 05:19:25,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 00:19:25] 2025-11-23 05:19:25,471 [wrapper] pilotpid: 1250755
[2025-11-23 00:19:25] 2025-11-23 05:19:25,473 [wrapper] Pilot exit status: 0
[2025-11-23 00:19:25] 2025-11-23 05:19:25,483 [wrapper] pandaids: 6895325935
[2025-11-23 00:19:25] 2025-11-23 05:19:25,555 [wrapper] cleanup supervisor_pilot 1712624 1250756
[2025-11-23 00:19:25] 2025-11-23 05:19:25,557 [wrapper] Test setup, not cleaning
[2025-11-23 00:19:25] 2025-11-23 05:19:25,559 [wrapper] apfmon messages muted
[2025-11-23 00:19:25] 2025-11-23 05:19:25,562 [wrapper] ==== wrapper stdout END ====
[2025-11-23 00:19:25] 2025-11-23 05:19:25,564 [wrapper] ==== wrapper stderr END ====
[2025-11-23 00:19:25]  *** Error codes and diagnostics ***
[2025-11-23 00:19:25]     "exeErrorCode": 0,
[2025-11-23 00:19:25]     "exeErrorDiag": "",
[2025-11-23 00:19:25]     "pilotErrorCode": 0,
[2025-11-23 00:19:25]     "pilotErrorDiag": "",
[2025-11-23 00:19:25]  *** Listing of results directory ***
[2025-11-23 00:19:25] total 1325624
[2025-11-23 00:19:25] -rw-r--r-- 1 whitlerd whitlerd    576529 Nov 21 09:47 pilot3.tar.gz
[2025-11-23 00:19:25] -rw-r--r-- 1 whitlerd whitlerd      5112 Nov 21 09:50 queuedata.json
[2025-11-23 00:19:25] -rwx------ 1 whitlerd whitlerd     36292 Nov 21 09:50 runpilot2-wrapper.sh
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd       100 Nov 22 15:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 00:19:25] -rwxr-xr-x 1 whitlerd whitlerd      7986 Nov 22 15:05 run_atlas
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd       105 Nov 22 15:05 job.xml
[2025-11-23 00:19:25] -rw-r--r-- 2 whitlerd whitlerd 409906706 Nov 22 15:05 EVNT.47483658._000036.pool.root.1
[2025-11-23 00:19:25] drwxrwx--x 2 whitlerd whitlerd      4096 Nov 22 15:05 shared
[2025-11-23 00:19:25] -rw-r--r-- 2 whitlerd whitlerd    590100 Nov 22 15:05 input.tar.gz
[2025-11-23 00:19:25] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 15:05 start_atlas.sh
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd      9475 Nov 22 15:05 init_data.xml
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 15:05 boinc_setup_complete
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 15:05 boinc_lockfile
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd      2783 Nov 22 15:05 pandaJob.out
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd    989768 Nov 22 15:05 agis_schedconf.cvmfs.json
[2025-11-23 00:19:25] drwx------ 5 whitlerd whitlerd      4096 Nov 22 15:05 pilot3
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd       532 Nov 23 00:12 boinc_task_state.xml
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd 931523221 Nov 23 00:18 HITS.47556137._000353.pool.root.1
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd      1035 Nov 23 00:18 memory_monitor_summary.json
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd   1526164 Nov 23 00:18 agis_ddmendpoints.agis.ALL.json
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd   1359304 Nov 23 00:18 log.47556137._000353.job.log.tgz.1
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd      8559 Nov 23 00:18 heartbeat.json
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd        95 Nov 23 00:19 pilot_heartbeat.json
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd      8192 Nov 23 00:19 boinc_mmap_file
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd        29 Nov 23 00:19 wrapper_checkpoint.txt
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd      4839 Nov 23 00:19 pilotlog.txt
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd   4684798 Nov 23 00:19 log.47556137._000353.job.log.1
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd       353 Nov 23 00:19 output.list
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd       620 Nov 23 00:19 runtime_log
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd   6062080 Nov 23 00:19 result.tar.gz
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd      9042 Nov 23 00:19 runtime_log.err
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd       657 Nov 23 00:19 LgqKDm4dhg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmygHKDmYAywNn.diag
[2025-11-23 00:19:25] -rw-rw-r-- 1 whitlerd whitlerd     21130 Nov 23 00:19 stderr.txt
[2025-11-23 00:19:25] HITS file was successfully produced:
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd 931523221 Nov 23 00:18 shared/HITS.pool.root.1
[2025-11-23 00:19:25]  *** Contents of shared directory: ***
[2025-11-23 00:19:25] total 1316516
[2025-11-23 00:19:25] -rw-r--r-- 2 whitlerd whitlerd 409906706 Nov 22 15:05 ATLAS.root_0
[2025-11-23 00:19:25] -rw-r--r-- 2 whitlerd whitlerd    590100 Nov 22 15:05 input.tar.gz
[2025-11-23 00:19:25] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 15:05 start_atlas.sh
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd 931523221 Nov 23 00:18 HITS.pool.root.1
[2025-11-23 00:19:25] -rw------- 1 whitlerd whitlerd   6062080 Nov 23 00:19 result.tar.gz
00:19:26 (1246470): run_atlas exited; CPU time 131709.299659
00:19:26 (1246470): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN