Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
06:42:15 (602783): wrapper (7.7.26015): starting
06:42:15 (602783): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 06:42:15] Arguments: --nthreads 4
[2025-11-22 06:42:15] Threads: 4
[2025-11-22 06:42:15] Checking for CVMFS
[2025-11-22 06:42:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 06:42:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 06:42:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 06:42:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 06:42:16] 2.13.2.0 489841 3 44392 153170 0 88 2417855 4096001 3495 130560 0 296134 99.003 231559 1976 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-22 06:42:16] CVMFS is ok
[2025-11-22 06:42:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 06:42:16] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-22 06:42:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-22 06:42:16] Further information can be found at the LHC@home message board.
[2025-11-22 06:42:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 06:42:16] Checking for apptainer binary...
[2025-11-22 06:42:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 06:42:16] Running /usr/bin/apptainer --version
[2025-11-22 06:42:16] apptainer version 1.4.3
[2025-11-22 06:42:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 06:42:16] SETI64-Ubuntu
[2025-11-22 06:42:16] apptainer works
[2025-11-22 06:42:16] Set ATHENA_PROC_NUMBER=4
[2025-11-22 06:42:16] Set ATHENA_CORE_NUMBER=4
[2025-11-22 06:42:16] Starting ATLAS job with PandaID=6895325339
[2025-11-22 06:42:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 15:05:15]  *** The last 200 lines of the pilot log: ***
[2025-11-22 15:05:15] 2025-11-22 20:04:42,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 15:05:15] 2025-11-22 20:04:42,610 | INFO     | fitting pss+swap vs Time
[2025-11-22 15:05:15] 2025-11-22 20:04:42,610 | INFO     | sum of square deviations: 37381566007.5
[2025-11-22 15:05:15] 2025-11-22 20:04:42,613 | INFO     | sum of deviations: 107547609465.00003
[2025-11-22 15:05:15] 2025-11-22 20:04:42,614 | INFO     | mean x: 1763826804.5
[2025-11-22 15:05:15] 2025-11-22 20:04:42,614 | INFO     | mean y: 2229106.5101214573
[2025-11-22 15:05:15] 2025-11-22 20:04:42,614 | INFO     | intersect: -5072340436.5690975
[2025-11-22 15:05:15] 2025-11-22 20:04:42,614 | INFO     | chi2: 5.923303704017728
[2025-11-22 15:05:15] 2025-11-22 20:04:42,614 | INFO     | sum of square deviations: 36257944940.0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,618 | INFO     | sum of deviations: 225661147087.00003
[2025-11-22 15:05:15] 2025-11-22 20:04:42,618 | INFO     | mean x: 1763826652.0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,618 | INFO     | mean y: 2245142.45398773
[2025-11-22 15:05:15] 2025-11-22 20:04:42,618 | INFO     | intersect: -10975408064.63213
[2025-11-22 15:05:15] 2025-11-22 20:04:42,618 | INFO     | chi2: 3.247376680074188
[2025-11-22 15:05:15] 2025-11-22 20:04:42,618 | INFO     | current chi2=3.247376680074188 (change=45.17625902127019 %)
[2025-11-22 15:05:15] 2025-11-22 20:04:42,619 | INFO     | sum of square deviations: 35157068485.0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,622 | INFO     | sum of deviations: 292407269434.00006
[2025-11-22 15:05:15] 2025-11-22 20:04:42,622 | INFO     | mean x: 1763826499.5
[2025-11-22 15:05:15] 2025-11-22 20:04:42,622 | INFO     | mean y: 2254343.6487603304
[2025-11-22 15:05:15] 2025-11-22 20:04:42,623 | INFO     | intersect: -14667788202.53726
[2025-11-22 15:05:15] 2025-11-22 20:04:42,623 | INFO     | chi2: 1.7176681344308289
[2025-11-22 15:05:15] 2025-11-22 20:04:42,623 | INFO     | current chi2=1.7176681344308289 (change=47.10597803542804 %)
[2025-11-22 15:05:15] 2025-11-22 20:04:42,623 | INFO     | sum of square deviations: 34078704080.0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,626 | INFO     | sum of deviations: 287193218427.99994
[2025-11-22 15:05:15] 2025-11-22 20:04:42,626 | INFO     | mean x: 1763826347.0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,627 | INFO     | mean y: 2253606.235908142
[2025-11-22 15:05:15] 2025-11-22 20:04:42,627 | INFO     | intersect: -14862131029.807806
[2025-11-22 15:05:15] 2025-11-22 20:04:42,627 | INFO     | chi2: 1.7164345508402876
[2025-11-22 15:05:15] 2025-11-22 20:04:42,627 | INFO     | current chi2=1.7164345508402876 (change=0.07181734153495423 %)
[2025-11-22 15:05:15] 2025-11-22 20:04:42,627 | INFO     | right removable region: 478
[2025-11-22 15:05:15] 2025-11-22 20:04:42,627 | INFO     | sum of square deviations: 36257944940.0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,631 | INFO     | sum of deviations: 27642974231.99999
[2025-11-22 15:05:15] 2025-11-22 20:04:42,631 | INFO     | mean x: 1763826957.0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,631 | INFO     | mean y: 2239909.417177914
[2025-11-22 15:05:15] 2025-11-22 20:04:42,631 | INFO     | intersect: -1342497725.4030583
[2025-11-22 15:05:15] 2025-11-22 20:04:42,632 | INFO     | chi2: 4.305173957879698
[2025-11-22 15:05:15] 2025-11-22 20:04:42,632 | INFO     | current chi2=4.305173957879698 (change=27.318027691885295 %)
[2025-11-22 15:05:15] 2025-11-22 20:04:42,632 | INFO     | sum of square deviations: 35157068485.0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,635 | INFO     | sum of deviations: 13919280089.499931
[2025-11-22 15:05:15] 2025-11-22 20:04:42,635 | INFO     | mean x: 1763827109.5
[2025-11-22 15:05:15] 2025-11-22 20:04:42,636 | INFO     | mean y: 2241809.2128099175
[2025-11-22 15:05:15] 2025-11-22 20:04:42,636 | INFO     | intersect: -696087278.6364373
[2025-11-22 15:05:15] 2025-11-22 20:04:42,636 | INFO     | chi2: 4.285678893847099
[2025-11-22 15:05:15] 2025-11-22 20:04:42,636 | INFO     | current chi2=4.285678893847099 (change=0.452828717801688 %)
[2025-11-22 15:05:15] 2025-11-22 20:04:42,636 | INFO     | left removable region: 20
[2025-11-22 15:05:15] 2025-11-22 20:04:42,636 | INFO     | sum of square deviations: 29790156694.5
[2025-11-22 15:05:15] 2025-11-22 20:04:42,640 | INFO     | sum of deviations: 168425357535.0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,640 | INFO     | mean x: 1763826926.5
[2025-11-22 15:05:15] 2025-11-22 20:04:42,640 | INFO     | mean y: 2270728.0262008733
[2025-11-22 15:05:15] 2025-11-22 20:04:42,640 | INFO     | intersect: -9969921891.573874
[2025-11-22 15:05:15] 2025-11-22 20:04:42,640 | INFO     | chi2: 0.03141758786021885
[2025-11-22 15:05:15] 2025-11-22 20:04:42,640 | INFO     | current memory leak: 5.65 B/s (using 458 data points, chi2=0.03)
[2025-11-22 15:05:15] 2025-11-22 20:04:42,641 | INFO     | could have reported an average CPU frequency of 2277 MHz (20 samples)
[2025-11-22 15:05:15] 2025-11-22 20:04:42,641 | INFO     | ..............................
[2025-11-22 15:05:15] 2025-11-22 20:04:42,641 | INFO     | . Timing measurements:
[2025-11-22 15:05:15] 2025-11-22 20:04:42,641 | INFO     | . get job = 0 s
[2025-11-22 15:05:15] 2025-11-22 20:04:42,641 | INFO     | . initial setup = 2 s
[2025-11-22 15:05:15] 2025-11-22 20:04:42,641 | INFO     | . payload setup = 4 s
[2025-11-22 15:05:15] 2025-11-22 20:04:42,641 | INFO     | . stage-in = 0 s
[2025-11-22 15:05:15] 2025-11-22 20:04:42,641 | INFO     | . payload execution = 30101 s
[2025-11-22 15:05:15] 2025-11-22 20:04:42,641 | INFO     | . stage-out = 4 s
[2025-11-22 15:05:15] 2025-11-22 20:04:42,641 | INFO     | . log creation = 0 s
[2025-11-22 15:05:15] 2025-11-22 20:04:42,641 | INFO     | ..............................
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | 
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | job summary report
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | --------------------------------------------------
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | PanDA job id: 6895325339
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | task id: 47556137
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | errors: (none)
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | pilot state: finished 
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | transexitcode: 0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | exeerrorcode: 0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | exeerrordiag: 
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | exitcode: 0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | exitmsg: OK
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | cpuconsumptiontime: 118517 s
[2025-11-22 15:05:15] 2025-11-22 20:04:42,681 | INFO     | nevents: 1000
[2025-11-22 15:05:15] 2025-11-22 20:04:42,682 | INFO     | neventsw: 0
[2025-11-22 15:05:15] 2025-11-22 20:04:42,682 | INFO     | pid: 616283
[2025-11-22 15:05:15] 2025-11-22 20:04:42,682 | INFO     | pgrp: 616283
[2025-11-22 15:05:15] 2025-11-22 20:04:42,682 | INFO     | corecount: 4
[2025-11-22 15:05:15] 2025-11-22 20:04:42,682 | INFO     | event service: False
[2025-11-22 15:05:15] 2025-11-22 20:04:42,682 | INFO     | sizes: {0: 2298812, 4: 2299074, 11: 2299102, 30109: 2338154, 30115: 2347178, 30118: 2347234, 30123: 2347608}
[2025-11-22 15:05:15] 2025-11-22 20:04:42,682 | INFO     | --------------------------------------------------
[2025-11-22 15:05:15] 2025-11-22 20:04:42,682 | INFO     | 
[2025-11-22 15:05:15] 2025-11-22 20:04:42,682 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/21
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,700 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,700 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 15:05:15] 2025-11-22 20:04:42,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,700 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 15:05:15] 2025-11-22 20:04:42,700 | INFO     | job 6895325339 has completed (purged errors)
[2025-11-22 15:05:15] 2025-11-22 20:04:42,700 | INFO     | overall cleanup function is called
[2025-11-22 15:05:15] 2025-11-22 20:04:43,712 | INFO     | --- collectZombieJob: --- 10, [616283]
[2025-11-22 15:05:15] 2025-11-22 20:04:43,712 | INFO     | zombie collector waiting for pid 616283
[2025-11-22 15:05:15] 2025-11-22 20:04:43,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 15:05:15] 2025-11-22 20:04:43,712 | INFO     | collected zombie processes
[2025-11-22 15:05:15] 2025-11-22 20:04:43,712 | INFO     | will attempt to kill all subprocesses of pid=616283
[2025-11-22 15:05:15] 2025-11-22 20:04:43,991 | INFO     | process IDs to be killed: [616283] (in reverse order)
[2025-11-22 15:05:15] 2025-11-22 20:04:44,076 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 15:05:15] 2025-11-22 20:04:44,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 15:05:15] 2025-11-22 20:04:44,084 | INFO     | did not find any defunct processes belonging to 616283
[2025-11-22 15:05:15] 2025-11-22 20:04:44,092 | INFO     | did not find any defunct processes belonging to 616283
[2025-11-22 15:05:15] 2025-11-22 20:04:44,093 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 15:05:15] 2025-11-22 20:04:44,093 | INFO     | ready for new job
[2025-11-22 15:05:15] 2025-11-22 20:04:44,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 15:05:15] 2025-11-22 20:04:44,095 | INFO     | ***************************************
[2025-11-22 15:05:15] 2025-11-22 20:04:44,095 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 15:05:15] 2025-11-22 20:04:44,095 | INFO     | ***************************************
[2025-11-22 15:05:15] 2025-11-22 20:04:44,095 | INFO     | 
[2025-11-22 15:05:15] 2025-11-22 20:04:44,100 | INFO     | architecture information:
[2025-11-22 15:05:15] 2025-11-22 20:04:44,100 | INFO     | executing command: cat /etc/os-release
[2025-11-22 15:05:15] 2025-11-22 20:04:44,112 | INFO     | cat /etc/os-release:
[2025-11-22 15:05:15] NAME="CentOS Linux"
[2025-11-22 15:05:15] VERSION="7 (Core)"
[2025-11-22 15:05:15] ID="centos"
[2025-11-22 15:05:15] ID_LIKE="rhel fedora"
[2025-11-22 15:05:15] VERSION_ID="7"
[2025-11-22 15:05:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 15:05:15] ANSI_COLOR="0;31"
[2025-11-22 15:05:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 15:05:15] HOME_URL="https://www.centos.org/"
[2025-11-22 15:05:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 15:05:15] 
[2025-11-22 15:05:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 15:05:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 15:05:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 15:05:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 15:05:15] 
[2025-11-22 15:05:15] 2025-11-22 20:04:44,112 | INFO     | ***************************************
[2025-11-22 15:05:15] 2025-11-22 20:04:44,615 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/21
[2025-11-22 15:05:15] 2025-11-22 20:04:44,627 | INFO     | sufficient remaining disk space (369181589504 B)
[2025-11-22 15:05:15] 2025-11-22 20:04:44,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 15:05:15] 2025-11-22 20:04:44,627 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 15:05:15] 2025-11-22 20:04:44,627 | INFO     | update_server=False
[2025-11-22 15:05:15] 2025-11-22 20:04:44,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 15:05:15] 2025-11-22 20:04:44,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 15:05:15] 2025-11-22 20:04:44,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 15:05:15] 2025-11-22 20:04:45,050 | INFO     | all payload control threads have been joined
[2025-11-22 15:05:15] 2025-11-22 20:04:45,122 | INFO     | all data control threads have been joined
[2025-11-22 15:05:15] 2025-11-22 20:04:45,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 15:05:15] 2025-11-22 20:04:45,549 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 15:05:15] 2025-11-22 20:04:45,549 | INFO     | aborting loop
[2025-11-22 15:05:15] 2025-11-22 20:04:45,632 | INFO     | [job] retrieve thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:45,633 | INFO     | [job] queue monitor thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:45,702 | INFO     | [data] copytool_in thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:45,787 | INFO     | all job control threads have been joined
[2025-11-22 15:05:15] 2025-11-22 20:04:46,056 | INFO     | [payload] control thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:46,090 | INFO     | [payload] validate_post thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:46,128 | INFO     | [data] control thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:46,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:46,405 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:46,440 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:46,467 | INFO     | [job] validate thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:46,539 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:46,554 | INFO     | [job] job monitor thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:46,793 | INFO     | [job] control thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:47,100 | INFO     | [payload] failed_post thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:47,302 | INFO     | [data] copytool_out thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:04:48,633 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 15:05:15] 2025-11-22 20:05:04,518 | INFO     | [monitor] cgroup control has ended
[2025-11-22 15:05:15] 2025-11-22 20:05:04,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132618874283840)>', '<ExcThread(monitor, started 132618255333120)>']
[2025-11-22 15:05:15] 2025-11-22 20:05:09,674 | INFO     | all workflow threads have been joined
[2025-11-22 15:05:15] 2025-11-22 20:05:09,674 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 15:05:15] 2025-11-22 20:05:09,674 | INFO     | traces error code: 0
[2025-11-22 15:05:15] 2025-11-22 20:05:09,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 15:05:15] 2025-11-22 20:05:15,061 | INFO     | PID=607047 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 15:05:15] 2025-11-22 20:05:15,061 | INFO     | .. there are 7 such processes running
[2025-11-22 15:05:15] 2025-11-22 20:05:15,062 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 15:05:15] 2025-11-22 20:05:15,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 15:05:15] 2025-11-22 20:05:15,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 15:05:15] 2025-11-22 20:05:15,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 15:05:15] 2025-11-22 20:05:15,062 | CRITICAL | thread 'MainThread' is not alive
[2025-11-22 15:05:15] 2025-11-22 20:05:15,062 | INFO     | [monitor] control thread has ended
[2025-11-22 15:05:15] 2025-11-22 20:05:15,144 [wrapper] ==== pilot stdout END ====
[2025-11-22 15:05:15] 2025-11-22 20:05:15,147 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 15:05:15] 2025-11-22 20:05:15,149 [wrapper] pilotpid: 607047
[2025-11-22 15:05:15] 2025-11-22 20:05:15,152 [wrapper] Pilot exit status: 0
[2025-11-22 15:05:15] 2025-11-22 20:05:15,160 [wrapper] pandaids: 6895325339
[2025-11-22 15:05:15] 2025-11-22 20:05:15,217 [wrapper] cleanup supervisor_pilot 1142621 607048
[2025-11-22 15:05:15] 2025-11-22 20:05:15,219 [wrapper] Test setup, not cleaning
[2025-11-22 15:05:15] 2025-11-22 20:05:15,222 [wrapper] apfmon messages muted
[2025-11-22 15:05:15] 2025-11-22 20:05:15,225 [wrapper] ==== wrapper stdout END ====
[2025-11-22 15:05:15] 2025-11-22 20:05:15,227 [wrapper] ==== wrapper stderr END ====
[2025-11-22 15:05:15]  *** Error codes and diagnostics ***
[2025-11-22 15:05:15]     "exeErrorCode": 0,
[2025-11-22 15:05:15]     "exeErrorDiag": "",
[2025-11-22 15:05:15]     "pilotErrorCode": 0,
[2025-11-22 15:05:15]     "pilotErrorDiag": "",
[2025-11-22 15:05:15]  *** Listing of results directory ***
[2025-11-22 15:05:15] total 1314156
[2025-11-22 15:05:15] -rw-r--r-- 1 whitlerd whitlerd    576529 Nov 21 09:24 pilot3.tar.gz
[2025-11-22 15:05:15] -rw-r--r-- 1 whitlerd whitlerd      5112 Nov 21 09:40 queuedata.json
[2025-11-22 15:05:15] -rwx------ 1 whitlerd whitlerd     36292 Nov 21 09:42 runpilot2-wrapper.sh
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd       100 Nov 22 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 15:05:15] -rwxr-xr-x 1 whitlerd whitlerd      7986 Nov 22 06:42 run_atlas
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd       105 Nov 22 06:42 job.xml
[2025-11-22 15:05:15] -rw-r--r-- 2 whitlerd whitlerd 407997339 Nov 22 06:42 EVNT.47483658._000034.pool.root.1
[2025-11-22 15:05:15] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 06:42 start_atlas.sh
[2025-11-22 15:05:15] drwxrwx--x 2 whitlerd whitlerd      4096 Nov 22 06:42 shared
[2025-11-22 15:05:15] -rw-r--r-- 2 whitlerd whitlerd    590102 Nov 22 06:42 input.tar.gz
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd      9474 Nov 22 06:42 init_data.xml
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 06:42 boinc_setup_complete
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 06:42 boinc_lockfile
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd      2781 Nov 22 06:42 pandaJob.out
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd    989768 Nov 22 06:42 agis_schedconf.cvmfs.json
[2025-11-22 15:05:15] drwx------ 5 whitlerd whitlerd      4096 Nov 22 06:42 pilot3
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd       533 Nov 22 14:55 boinc_task_state.xml
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd 922562872 Nov 22 15:04 HITS.47556137._000331.pool.root.1
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd      1041 Nov 22 15:04 memory_monitor_summary.json
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd        95 Nov 22 15:04 pilot_heartbeat.json
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd   1526164 Nov 22 15:04 agis_ddmendpoints.agis.ALL.json
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd   1319338 Nov 22 15:04 log.47556137._000331.job.log.tgz.1
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd      8580 Nov 22 15:04 heartbeat.json
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd      8192 Nov 22 15:05 boinc_mmap_file
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd        29 Nov 22 15:05 wrapper_checkpoint.txt
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd       891 Nov 22 15:05 pilotlog.txt
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd   4286204 Nov 22 15:05 log.47556137._000331.job.log.1
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd       353 Nov 22 15:05 output.list
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd       620 Nov 22 15:05 runtime_log
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd   5621760 Nov 22 15:05 result.tar.gz
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd      9042 Nov 22 15:05 runtime_log.err
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd       661 Nov 22 15:05 1ZGLDmDWhg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2fHKDm4QH1Uo.diag
[2025-11-22 15:05:15] -rw-rw-r-- 1 whitlerd whitlerd     21106 Nov 22 15:05 stderr.txt
[2025-11-22 15:05:15] HITS file was successfully produced:
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd 922562872 Nov 22 15:04 shared/HITS.pool.root.1
[2025-11-22 15:05:15]  *** Contents of shared directory: ***
[2025-11-22 15:05:15] total 1305476
[2025-11-22 15:05:15] -rw-r--r-- 2 whitlerd whitlerd 407997339 Nov 22 06:42 ATLAS.root_0
[2025-11-22 15:05:15] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 06:42 start_atlas.sh
[2025-11-22 15:05:15] -rw-r--r-- 2 whitlerd whitlerd    590102 Nov 22 06:42 input.tar.gz
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd 922562872 Nov 22 15:04 HITS.pool.root.1
[2025-11-22 15:05:15] -rw------- 1 whitlerd whitlerd   5621760 Nov 22 15:05 result.tar.gz
15:05:16 (602783): run_atlas exited; CPU time 119253.575490
15:05:16 (602783): called boinc_finish(0)

</stderr_txt>
]]>

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