Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:42:29 (6372): wrapper (7.7.26015): starting
03:42:29 (6372): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 03:42:29] Arguments: --nthreads 8
[2025-11-25 03:42:29] Threads: 8
[2025-11-25 03:42:29] Checking for CVMFS
[2025-11-25 03:42:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 03:42:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 03:42:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 03:42:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 03:42:30] 2.11.2.0 4277 283170 140180 153266 3 377 17530659 25165825 906 130560 13 142752327 99.881 78571189 2718 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 03:42:30] CVMFS is ok
[2025-11-25 03:42:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 03:42:30] Checking for apptainer binary...
[2025-11-25 03:42:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 03:42:30] Running /usr/bin/apptainer --version
[2025-11-25 03:42:30] apptainer version 1.3.2-1.el7
[2025-11-25 03:42:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 03:42:32] cg-vwn279.simple-grid.lan
[2025-11-25 03:42:32] apptainer works
[2025-11-25 03:42:32] Set ATHENA_PROC_NUMBER=8
[2025-11-25 03:42:32] Set ATHENA_CORE_NUMBER=8
[2025-11-25 03:42:32] Starting ATLAS job with PandaID=6895324442
[2025-11-25 03:42:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:36:26]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:36:26] 2025-11-26 01:35:06,244 | INFO     | time since job start (82335s) is within the limit (172800.0s)
[2025-11-26 02:36:26] 2025-11-26 01:35:07,482 | INFO     | monitor loop #5504: job 0:6895324442 is in state 'finished'
[2025-11-26 02:36:26] 2025-11-26 01:35:07,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:36:26] 2025-11-26 01:35:08,251 | INFO     | time since job start (82337s) is within the limit (172800.0s)
[2025-11-26 02:36:26] 2025-11-26 01:35:09,987 | INFO     | monitor loop #5505: job 0:6895324442 is in state 'finished'
[2025-11-26 02:36:26] 2025-11-26 01:35:09,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:36:26] 2025-11-26 01:35:10,258 | INFO     | time since job start (82339s) is within the limit (172800.0s)
[2025-11-26 02:36:26] 2025-11-26 01:35:12,272 | INFO     | time since job start (82341s) is within the limit (172800.0s)
[2025-11-26 02:36:26] 2025-11-26 01:35:12,492 | INFO     | monitor loop #5506: job 0:6895324442 is in state 'finished'
[2025-11-26 02:36:26] 2025-11-26 01:35:12,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:36:26] 2025-11-26 01:35:14,279 | INFO     | time since job start (82343s) is within the limit (172800.0s)
[2025-11-26 02:36:26] 2025-11-26 01:35:15,001 | INFO     | monitor loop #5507: job 0:6895324442 is in state 'finished'
[2025-11-26 02:36:26] 2025-11-26 01:35:15,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:36:26] 2025-11-26 01:35:15,405 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 02:36:26] 2025-11-26 01:35:15,406 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 02:36:26] 2025-11-26 01:35:15,408 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6895324442/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:36:26] 2025-11-26 01:35:15,409 | INFO     | extracted standard info from prmon json
[2025-11-26 02:36:26] 2025-11-26 01:35:15,410 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:36:26] 2025-11-26 01:35:15,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:36:26] 2025-11-26 01:35:15,447 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:36:26] 2025-11-26 01:35:15,456 | INFO     | sum of square deviations: 759532027097.7404
[2025-11-26 02:36:26] 2025-11-26 01:35:15,541 | INFO     | sum of deviations: 1210590021693.0469
[2025-11-26 02:36:26] 2025-11-26 01:35:15,541 | INFO     | mean x: 1764079696.6832345
[2025-11-26 02:36:26] 2025-11-26 01:35:15,541 | INFO     | mean y: 2842199.1172106825
[2025-11-26 02:36:26] 2025-11-26 01:35:15,542 | INFO     | intersect: -2808859219.7634487
[2025-11-26 02:36:26] 2025-11-26 01:35:15,543 | INFO     | chi2: 20.5627046970295
[2025-11-26 02:36:26] 2025-11-26 01:35:15,545 | INFO     | sum of square deviations: 751112020800.7135
[2025-11-26 02:36:26] 2025-11-26 01:35:15,612 | INFO     | sum of deviations: 1677993794011.3174
[2025-11-26 02:36:26] 2025-11-26 01:35:15,612 | INFO     | mean x: 1764079544.1876397
[2025-11-26 02:36:26] 2025-11-26 01:35:15,612 | INFO     | mean y: 2850662.006701415
[2025-11-26 02:36:26] 2025-11-26 01:35:15,612 | INFO     | intersect: -3938125444.5047884
[2025-11-26 02:36:26] 2025-11-26 01:35:15,614 | INFO     | chi2: 16.894019836199067
[2025-11-26 02:36:26] 2025-11-26 01:35:15,614 | INFO     | current chi2=16.894019836199067 (change=17.84145089318144 %)
[2025-11-26 02:36:26] 2025-11-26 01:35:15,614 | INFO     | right removable region: 1342
[2025-11-26 02:36:26] 2025-11-26 01:35:15,616 | INFO     | sum of square deviations: 751111047850.7147
[2025-11-26 02:36:26] 2025-11-26 01:35:15,671 | INFO     | sum of deviations: 809131367857.5026
[2025-11-26 02:36:26] 2025-11-26 01:35:15,672 | INFO     | mean x: 1764079849.1876397
[2025-11-26 02:36:26] 2025-11-26 01:35:15,672 | INFO     | mean y: 2849465.656738645
[2025-11-26 02:36:26] 2025-11-26 01:35:15,672 | INFO     | intersect: -1897498486.1773362
[2025-11-26 02:36:26] 2025-11-26 01:35:15,674 | INFO     | chi2: 18.20759349571863
[2025-11-26 02:36:26] 2025-11-26 01:35:15,674 | INFO     | current chi2=18.20759349571863 (change=11.453314318378993 %)
[2025-11-26 02:36:26] 2025-11-26 01:35:15,674 | INFO     | left removable region: 10
[2025-11-26 02:36:26] 2025-11-26 01:35:15,676 | INFO     | sum of square deviations: 732805940920.6389
[2025-11-26 02:36:26] 2025-11-26 01:35:15,731 | INFO     | sum of deviations: 1291131828061.6975
[2025-11-26 02:36:26] 2025-11-26 01:35:15,731 | INFO     | mean x: 1764079818.6944444
[2025-11-26 02:36:26] 2025-11-26 01:35:15,731 | INFO     | mean y: 2861096.2424924923
[2025-11-26 02:36:26] 2025-11-26 01:35:15,731 | INFO     | intersect: -3105273641.715876
[2025-11-26 02:36:26] 2025-11-26 01:35:15,733 | INFO     | chi2: 13.782396600442183
[2025-11-26 02:36:26] 2025-11-26 01:35:15,733 | INFO     | current memory leak: 1.76 B/s (using 1332 data points, chi2=13.78)
[2025-11-26 02:36:26] 2025-11-26 01:35:15,735 | INFO     | could have reported an average CPU frequency of 1999 MHz (45 samples)
[2025-11-26 02:36:26] 2025-11-26 01:35:15,735 | INFO     | ..............................
[2025-11-26 02:36:26] 2025-11-26 01:35:15,735 | INFO     | . Timing measurements:
[2025-11-26 02:36:26] 2025-11-26 01:35:15,735 | INFO     | . get job = 0 s
[2025-11-26 02:36:26] 2025-11-26 01:35:15,735 | INFO     | . initial setup = 2 s
[2025-11-26 02:36:26] 2025-11-26 01:35:15,736 | INFO     | . payload setup = 10 s
[2025-11-26 02:36:26] 2025-11-26 01:35:15,736 | INFO     | . stage-in = 0 s
[2025-11-26 02:36:26] 2025-11-26 01:35:15,736 | INFO     | . payload execution = 82180 s
[2025-11-26 02:36:26] 2025-11-26 01:35:15,736 | INFO     | . stage-out = 9 s
[2025-11-26 02:36:26] 2025-11-26 01:35:15,736 | INFO     | . log creation = 2 s
[2025-11-26 02:36:26] 2025-11-26 01:35:15,736 | INFO     | ..............................
[2025-11-26 02:36:26] 2025-11-26 01:35:15,875 | INFO     | 
[2025-11-26 02:36:26] 2025-11-26 01:35:15,876 | INFO     | job summary report
[2025-11-26 02:36:26] 2025-11-26 01:35:15,876 | INFO     | --------------------------------------------------
[2025-11-26 02:36:26] 2025-11-26 01:35:15,876 | INFO     | PanDA job id: 6895324442
[2025-11-26 02:36:26] 2025-11-26 01:35:15,876 | INFO     | task id: 47556137
[2025-11-26 02:36:26] 2025-11-26 01:35:15,876 | INFO     | errors: (none)
[2025-11-26 02:36:26] 2025-11-26 01:35:15,876 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:36:26] 2025-11-26 01:35:15,876 | INFO     | pilot state: finished 
[2025-11-26 02:36:26] 2025-11-26 01:35:15,876 | INFO     | transexitcode: 0
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | exeerrorcode: 0
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | exeerrordiag: 
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | exitcode: 0
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | exitmsg: OK
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | cpuconsumptiontime: 332478 s
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | nevents: 1000
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | neventsw: 0
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | pid: 16539
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | pgrp: 16539
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | corecount: 8
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | event service: False
[2025-11-26 02:36:26] 2025-11-26 01:35:15,877 | INFO     | sizes: {0: 2284136, 1: 2284335, 8: 2284597, 12: 2284625, 82195: 2343040, 82205: 2352041, 82207: 2352225, 82325: 2352471}
[2025-11-26 02:36:26] 2025-11-26 01:35:15,878 | INFO     | --------------------------------------------------
[2025-11-26 02:36:26] 2025-11-26 01:35:15,878 | INFO     | 
[2025-11-26 02:36:26] 2025-11-26 01:35:15,878 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-11-26 02:36:26] 2025-11-26 01:35:16,287 | INFO     | time since job start (82345s) is within the limit (172800.0s)
[2025-11-26 02:36:26] 2025-11-26 01:35:16,519 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,519 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,519 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,519 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,520 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,521 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:36:26] 2025-11-26 01:35:16,521 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,521 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:36:26] 2025-11-26 01:35:16,521 | INFO     | job 6895324442 has completed (purged errors)
[2025-11-26 02:36:26] 2025-11-26 01:35:16,521 | INFO     | overall cleanup function is called
[2025-11-26 02:36:26] 2025-11-26 01:35:17,543 | INFO     | --- collectZombieJob: --- 10, [16539]
[2025-11-26 02:36:26] 2025-11-26 01:35:17,544 | INFO     | zombie collector waiting for pid 16539
[2025-11-26 02:36:26] 2025-11-26 01:35:17,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:36:26] 2025-11-26 01:35:17,544 | INFO     | collected zombie processes
[2025-11-26 02:36:26] 2025-11-26 01:35:17,544 | INFO     | will attempt to kill all subprocesses of pid=16539
[2025-11-26 02:36:26] 2025-11-26 01:35:17,639 | INFO     | process IDs to be killed: [16539] (in reverse order)
[2025-11-26 02:36:26] 2025-11-26 01:35:18,364 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:36:26] 2025-11-26 01:35:18,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:36:26] 2025-11-26 01:35:18,367 | INFO     | did not find any defunct processes belonging to 16539
[2025-11-26 02:36:26] 2025-11-26 01:35:18,369 | INFO     | did not find any defunct processes belonging to 16539
[2025-11-26 02:36:26] 2025-11-26 01:35:18,381 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:36:26] 2025-11-26 01:35:18,381 | INFO     | ready for new job
[2025-11-26 02:36:26] 2025-11-26 01:35:18,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:36:26] 2025-11-26 01:35:18,387 | INFO     | ***************************************
[2025-11-26 02:36:26] 2025-11-26 01:35:18,387 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:36:26] 2025-11-26 01:35:18,387 | INFO     | ***************************************
[2025-11-26 02:36:26] 2025-11-26 01:35:18,387 | INFO     | 
[2025-11-26 02:36:26] 2025-11-26 01:35:18,388 | INFO     | pilot is running in a VM
[2025-11-26 02:36:26] 2025-11-26 01:35:18,388 | INFO     | architecture information:
[2025-11-26 02:36:26] 2025-11-26 01:35:18,393 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:36:26] 2025-11-26 01:35:18,735 | INFO     | cat /etc/os-release:
[2025-11-26 02:36:26] NAME="CentOS Linux"
[2025-11-26 02:36:26] VERSION="7 (Core)"
[2025-11-26 02:36:26] ID="centos"
[2025-11-26 02:36:26] ID_LIKE="rhel fedora"
[2025-11-26 02:36:26] VERSION_ID="7"
[2025-11-26 02:36:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:36:26] ANSI_COLOR="0;31"
[2025-11-26 02:36:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:36:26] HOME_URL="https://www.centos.org/"
[2025-11-26 02:36:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:36:26] 
[2025-11-26 02:36:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:36:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:36:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:36:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:36:26] 
[2025-11-26 02:36:26] 2025-11-26 01:35:18,736 | INFO     | ***************************************
[2025-11-26 02:36:26] 2025-11-26 01:35:19,239 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-11-26 02:36:26] 2025-11-26 01:35:19,526 | INFO     | sufficient remaining disk space (494745419776 B)
[2025-11-26 02:36:26] 2025-11-26 01:35:19,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:36:26] 2025-11-26 01:35:19,527 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:36:26] 2025-11-26 01:35:19,527 | INFO     | update_server=False
[2025-11-26 02:36:26] 2025-11-26 01:35:19,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:36:26] 2025-11-26 01:35:19,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:36:26] 2025-11-26 01:35:20,011 | INFO     | all payload control threads have been joined
[2025-11-26 02:36:26] 2025-11-26 01:35:20,023 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 02:36:26] 2025-11-26 01:35:20,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 02:36:26] 2025-11-26 01:35:20,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:36:26] 2025-11-26 01:35:20,024 | INFO     | will abort loop
[2025-11-26 02:36:26] 2025-11-26 01:35:20,088 | INFO     | all job control threads have been joined
[2025-11-26 02:36:26] 2025-11-26 01:35:20,159 | INFO     | all data control threads have been joined
[2025-11-26 02:36:26] 2025-11-26 01:35:20,533 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:20,572 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:20,808 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:20,846 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:20,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:36:26] 2025-11-26 01:35:21,018 | INFO     | [payload] control thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:21,030 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:21,081 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:21,095 | INFO     | [job] control thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:21,103 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:21,166 | INFO     | [data] control thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:21,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:36:26] 2025-11-26 01:35:21,490 | INFO     | [job] validate thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:21,526 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:21,775 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:21,838 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:21,896 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:25,393 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:36:26] 2025-11-26 01:35:49,426 | INFO     | PID=10091 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 02:36:26] 2025-11-26 01:35:49,427 | INFO     | .. there are 2 such processes running
[2025-11-26 02:36:26] 2025-11-26 01:35:49,427 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:36:26] 2025-11-26 01:35:49,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:36:26] 2025-11-26 01:35:49,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:36:26] 2025-11-26 01:36:15,412 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:36:26] 2025-11-26 01:36:16,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140159802484544)>', '<ExcThread(monitor, started 140159118984960)>']
[2025-11-26 02:36:26] 2025-11-26 01:36:17,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:36:26] 2025-11-26 01:36:17,597 | INFO     | [monitor] control thread has ended
[2025-11-26 02:36:26] 2025-11-26 01:36:21,803 | INFO     | all workflow threads have been joined
[2025-11-26 02:36:26] 2025-11-26 01:36:21,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:36:26] 2025-11-26 01:36:21,803 | INFO     | traces error code: 0
[2025-11-26 02:36:26] 2025-11-26 01:36:21,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:36:26] 2025-11-26 01:36:22,148 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:36:26] 2025-11-26 01:36:22,257 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:36:26] 2025-11-26 01:36:22,293 [wrapper] pilotpid: 10091
[2025-11-26 02:36:26] 2025-11-26 01:36:22,327 [wrapper] Pilot exit status: 0
[2025-11-26 02:36:26] 2025-11-26 01:36:22,746 [wrapper] pandaids: 6895324442
[2025-11-26 02:36:26] 2025-11-26 01:36:23,316 [wrapper] cleanup supervisor_pilot  3182 10092
[2025-11-26 02:36:26] 2025-11-26 01:36:23,445 [wrapper] Test setup, not cleaning
[2025-11-26 02:36:26] 2025-11-26 01:36:23,535 [wrapper] apfmon messages muted
[2025-11-26 02:36:26] 2025-11-26 01:36:23,628 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:36:26] 2025-11-26 01:36:23,727 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:36:26]  *** Error codes and diagnostics ***
[2025-11-26 02:36:26]     "exeErrorCode": 0,
[2025-11-26 02:36:26]     "exeErrorDiag": "",
[2025-11-26 02:36:26]     "pilotErrorCode": 0,
[2025-11-26 02:36:26]     "pilotErrorDiag": "",
[2025-11-26 02:36:26]  *** Listing of results directory ***
[2025-11-26 02:36:26] total 1318352
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc      5112 Nov 21 15:24 queuedata.json
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc    576529 Nov 21 15:24 pilot3.tar.gz
[2025-11-26 02:36:26] -rwx------. 1 boinc boinc     36292 Nov 21 15:25 runpilot2-wrapper.sh
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc       100 Nov 25 03:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:36:26] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 03:42 run_atlas
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc       105 Nov 25 03:42 job.xml
[2025-11-26 02:36:26] -rw-r--r--. 2 boinc boinc 413283932 Nov 25 03:42 EVNT.47483658._000025.pool.root.1
[2025-11-26 02:36:26] -rw-r--r--. 2 boinc boinc     15847 Nov 25 03:42 start_atlas.sh
[2025-11-26 02:36:26] drwxrwx--x. 2 boinc boinc        68 Nov 25 03:42 shared
[2025-11-26 02:36:26] -rw-r--r--. 2 boinc boinc    590097 Nov 25 03:42 input.tar.gz
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc      6392 Nov 25 03:42 init_data.xml
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc         0 Nov 25 03:42 boinc_lockfile
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc      2784 Nov 25 03:42 pandaJob.out
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc    991801 Nov 25 03:42 agis_schedconf.cvmfs.json
[2025-11-26 02:36:26] drwx------. 5 boinc boinc      4096 Nov 25 03:42 pilot3
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc       533 Nov 26 02:04 boinc_task_state.xml
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc 905976210 Nov 26 02:31 HITS.47556137._000242.pool.root.1
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc      1035 Nov 26 02:33 memory_monitor_summary.json
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc   1516240 Nov 26 02:33 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc   2434480 Nov 26 02:33 log.47556137._000242.job.log.tgz.1
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc        95 Nov 26 02:35 pilot_heartbeat.json
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc      7941 Nov 26 02:35 heartbeat.json
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc        29 Nov 26 02:36 wrapper_checkpoint.txt
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc      8192 Nov 26 02:36 boinc_mmap_file
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc      5071 Nov 26 02:36 pilotlog.txt
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc  10979676 Nov 26 02:36 log.47556137._000242.job.log.1
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc       353 Nov 26 02:36 output.list
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc       620 Nov 26 02:36 runtime_log
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc  13434880 Nov 26 02:36 result.tar.gz
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc      8833 Nov 26 02:36 runtime_log.err
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc       662 Nov 26 02:36 qWiKDm2Fhg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0TJKDmdtEoBo.diag
[2025-11-26 02:36:26] -rw-r--r--. 1 boinc boinc     21374 Nov 26 02:36 stderr.txt
[2025-11-26 02:36:26] HITS file was successfully produced:
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc 905976210 Nov 26 02:31 shared/HITS.pool.root.1
[2025-11-26 02:36:26]  *** Contents of shared directory: ***
[2025-11-26 02:36:26] total 1302060
[2025-11-26 02:36:26] -rw-r--r--. 2 boinc boinc 413283932 Nov 25 03:42 ATLAS.root_0
[2025-11-26 02:36:26] -rw-r--r--. 2 boinc boinc     15847 Nov 25 03:42 start_atlas.sh
[2025-11-26 02:36:26] -rw-r--r--. 2 boinc boinc    590097 Nov 25 03:42 input.tar.gz
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc 905976210 Nov 26 02:31 HITS.pool.root.1
[2025-11-26 02:36:26] -rw-------. 1 boinc boinc  13434880 Nov 26 02:36 result.tar.gz
02:36:28 (6372): run_atlas exited; CPU time 332624.833704
02:36:28 (6372): called boinc_finish(0)

</stderr_txt>
]]>

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