Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
15:02:59 (1206439): wrapper (7.7.26015): starting
15:02:59 (1206439): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 15:02:59] Arguments: --nthreads 4
[2025-11-22 15:02:59] Threads: 4
[2025-11-22 15:02:59] Checking for CVMFS
[2025-11-22 15:02:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 15:02:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 15:02:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 15:03:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 15:03:01] 2.13.2.0 489841 504 66252 153183 0 89 2619719 4096001 3641 130560 0 1923574 99.737 308333 1388 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-22 15:03:01] CVMFS is ok
[2025-11-22 15:03:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 15:03:01] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-22 15:03:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-22 15:03:01] Further information can be found at the LHC@home message board.
[2025-11-22 15:03:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 15:03:01] Checking for apptainer binary...
[2025-11-22 15:03:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 15:03:01] Running /usr/bin/apptainer --version
[2025-11-22 15:03:01] apptainer version 1.4.3
[2025-11-22 15:03:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 15:03:01] SETI64-Ubuntu
[2025-11-22 15:03:01] apptainer works
[2025-11-22 15:03:01] Set ATHENA_PROC_NUMBER=4
[2025-11-22 15:03:01] Set ATHENA_CORE_NUMBER=4
[2025-11-22 15:03:01] Starting ATLAS job with PandaID=6893827725
[2025-11-22 15:03:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 00:19:21]  *** The last 200 lines of the pilot log: ***
[2025-11-23 00:19:21] 2025-11-23 05:18:48,280 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 00:19:21] 2025-11-23 05:18:48,280 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 00:19:21] 2025-11-23 05:18:48,286 | INFO     | fitting pss+swap vs Time
[2025-11-23 00:19:21] 2025-11-23 05:18:48,286 | INFO     | sum of square deviations: 50472509132.5
[2025-11-23 00:19:21] 2025-11-23 05:18:48,291 | INFO     | sum of deviations: 398725920164.49994
[2025-11-23 00:19:21] 2025-11-23 05:18:48,291 | INFO     | mean x: 1763858438.5
[2025-11-23 00:19:21] 2025-11-23 05:18:48,291 | INFO     | mean y: 2230276.705128205
[2025-11-23 00:19:21] 2025-11-23 05:18:48,291 | INFO     | intersect: -13932010184.46441
[2025-11-23 00:19:21] 2025-11-23 05:18:48,291 | INFO     | chi2: 6.855226204640886
[2025-11-23 00:19:21] 2025-11-23 05:18:48,292 | INFO     | sum of square deviations: 49098557790.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,296 | INFO     | sum of deviations: 502281729980.9999
[2025-11-23 00:19:21] 2025-11-23 05:18:48,296 | INFO     | mean x: 1763858286.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,296 | INFO     | mean y: 2241749.604436229
[2025-11-23 00:19:21] 2025-11-23 05:18:48,296 | INFO     | intersect: -18042153670.78091
[2025-11-23 00:19:21] 2025-11-23 05:18:48,297 | INFO     | chi2: 4.79577423387839
[2025-11-23 00:19:21] 2025-11-23 05:18:48,297 | INFO     | current chi2=4.79577423387839 (change=30.042071687850026 %)
[2025-11-23 00:19:21] 2025-11-23 05:18:48,297 | INFO     | sum of square deviations: 47749769710.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,302 | INFO     | sum of deviations: 501356734704.00006
[2025-11-23 00:19:21] 2025-11-23 05:18:48,302 | INFO     | mean x: 1763858133.5
[2025-11-23 00:19:21] 2025-11-23 05:18:48,302 | INFO     | mean y: 2241639.6791044776
[2025-11-23 00:19:21] 2025-11-23 05:18:48,302 | INFO     | intersect: -18517683370.71216
[2025-11-23 00:19:21] 2025-11-23 05:18:48,302 | INFO     | chi2: 4.762008092249749
[2025-11-23 00:19:21] 2025-11-23 05:18:48,302 | INFO     | current chi2=4.762008092249749 (change=0.7040811343893103 %)
[2025-11-23 00:19:21] 2025-11-23 05:18:48,302 | INFO     | right removable region: 535
[2025-11-23 00:19:21] 2025-11-23 05:18:48,303 | INFO     | sum of square deviations: 49098557790.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,307 | INFO     | sum of deviations: 259567046707.00024
[2025-11-23 00:19:21] 2025-11-23 05:18:48,307 | INFO     | mean x: 1763858591.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,307 | INFO     | mean y: 2245712.268022181
[2025-11-23 00:19:21] 2025-11-23 05:18:48,307 | INFO     | intersect: -9322662918.100948
[2025-11-23 00:19:21] 2025-11-23 05:18:48,308 | INFO     | chi2: 3.9589165815589635
[2025-11-23 00:19:21] 2025-11-23 05:18:48,308 | INFO     | current chi2=3.9589165815589635 (change=42.249657948867736 %)
[2025-11-23 00:19:21] 2025-11-23 05:18:48,308 | INFO     | sum of square deviations: 47749769710.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,313 | INFO     | sum of deviations: 149028456541.49997
[2025-11-23 00:19:21] 2025-11-23 05:18:48,313 | INFO     | mean x: 1763858743.5
[2025-11-23 00:19:21] 2025-11-23 05:18:48,313 | INFO     | mean y: 2258203.6026119404
[2025-11-23 00:19:21] 2025-11-23 05:18:48,313 | INFO     | intersect: -5502797584.048316
[2025-11-23 00:19:21] 2025-11-23 05:18:48,314 | INFO     | chi2: 2.2277967885528662
[2025-11-23 00:19:21] 2025-11-23 05:18:48,314 | INFO     | current chi2=2.2277967885528662 (change=43.727109610488625 %)
[2025-11-23 00:19:21] 2025-11-23 05:18:48,314 | INFO     | sum of square deviations: 46425912330.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,319 | INFO     | sum of deviations: 129322682170.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,319 | INFO     | mean x: 1763858896.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,319 | INFO     | mean y: 2260471.416195857
[2025-11-23 00:19:21] 2025-11-23 05:18:48,319 | INFO     | intersect: -4911093988.453717
[2025-11-23 00:19:21] 2025-11-23 05:18:48,319 | INFO     | chi2: 2.193806052302497
[2025-11-23 00:19:21] 2025-11-23 05:18:48,320 | INFO     | current chi2=2.193806052302497 (change=1.525755689433821 %)
[2025-11-23 00:19:21] 2025-11-23 05:18:48,320 | INFO     | left removable region: 30
[2025-11-23 00:19:21] 2025-11-23 05:18:48,320 | INFO     | sum of square deviations: 39934739460.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,324 | INFO     | sum of deviations: 191230005564.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,325 | INFO     | mean x: 1763859018.0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,325 | INFO     | mean y: 2277847.186138614
[2025-11-23 00:19:21] 2025-11-23 05:18:48,325 | INFO     | intersect: -8444071731.834042
[2025-11-23 00:19:21] 2025-11-23 05:18:48,325 | INFO     | chi2: 0.03358866498475566
[2025-11-23 00:19:21] 2025-11-23 05:18:48,325 | INFO     | current memory leak: 4.79 B/s (using 505 data points, chi2=0.03)
[2025-11-23 00:19:21] 2025-11-23 05:18:48,325 | INFO     | could have reported an average CPU frequency of 2303 MHz (22 samples)
[2025-11-23 00:19:21] 2025-11-23 05:18:48,326 | INFO     | ..............................
[2025-11-23 00:19:21] 2025-11-23 05:18:48,326 | INFO     | . Timing measurements:
[2025-11-23 00:19:21] 2025-11-23 05:18:48,326 | INFO     | . get job = 0 s
[2025-11-23 00:19:21] 2025-11-23 05:18:48,326 | INFO     | . initial setup = 4 s
[2025-11-23 00:19:21] 2025-11-23 05:18:48,326 | INFO     | . payload setup = 4 s
[2025-11-23 00:19:21] 2025-11-23 05:18:48,326 | INFO     | . stage-in = 0 s
[2025-11-23 00:19:21] 2025-11-23 05:18:48,326 | INFO     | . payload execution = 33301 s
[2025-11-23 00:19:21] 2025-11-23 05:18:48,326 | INFO     | . stage-out = 3 s
[2025-11-23 00:19:21] 2025-11-23 05:18:48,326 | INFO     | . log creation = 0 s
[2025-11-23 00:19:21] 2025-11-23 05:18:48,326 | INFO     | ..............................
[2025-11-23 00:19:21] 2025-11-23 05:18:48,371 | INFO     | 
[2025-11-23 00:19:21] 2025-11-23 05:18:48,371 | INFO     | job summary report
[2025-11-23 00:19:21] 2025-11-23 05:18:48,371 | INFO     | --------------------------------------------------
[2025-11-23 00:19:21] 2025-11-23 05:18:48,371 | INFO     | PanDA job id: 6893827725
[2025-11-23 00:19:21] 2025-11-23 05:18:48,371 | INFO     | task id: 47523449
[2025-11-23 00:19:21] 2025-11-23 05:18:48,371 | INFO     | errors: (none)
[2025-11-23 00:19:21] 2025-11-23 05:18:48,371 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | pilot state: finished 
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | transexitcode: 0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | exeerrorcode: 0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | exeerrordiag: 
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | exitcode: 0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | exitmsg: OK
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | cpuconsumptiontime: 130517 s
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | nevents: 1000
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | neventsw: 0
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | pid: 1224574
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | pgrp: 1224574
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | corecount: 4
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | event service: False
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | sizes: {0: 2298643, 1: 2298842, 4: 2299104, 11: 2299132, 33309: 2339534, 33313: 2348558, 33316: 2348742, 33321: 2348988}
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | --------------------------------------------------
[2025-11-23 00:19:21] 2025-11-23 05:18:48,372 | INFO     | 
[2025-11-23 00:19:21] 2025-11-23 05:18:48,373 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/11
[2025-11-23 00:19:21] 2025-11-23 05:18:48,390 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,390 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,390 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 00:19:21] 2025-11-23 05:18:48,391 | INFO     | job 6893827725 has completed (purged errors)
[2025-11-23 00:19:21] 2025-11-23 05:18:48,392 | INFO     | overall cleanup function is called
[2025-11-23 00:19:21] 2025-11-23 05:18:49,403 | INFO     | --- collectZombieJob: --- 10, [1224574]
[2025-11-23 00:19:21] 2025-11-23 05:18:49,403 | INFO     | zombie collector waiting for pid 1224574
[2025-11-23 00:19:21] 2025-11-23 05:18:49,403 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 00:19:21] 2025-11-23 05:18:49,404 | INFO     | collected zombie processes
[2025-11-23 00:19:21] 2025-11-23 05:18:49,404 | INFO     | will attempt to kill all subprocesses of pid=1224574
[2025-11-23 00:19:21] 2025-11-23 05:18:49,704 | INFO     | process IDs to be killed: [1224574] (in reverse order)
[2025-11-23 00:19:21] 2025-11-23 05:18:49,798 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 00:19:21] 2025-11-23 05:18:49,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 00:19:21] 2025-11-23 05:18:49,806 | INFO     | did not find any defunct processes belonging to 1224574
[2025-11-23 00:19:21] 2025-11-23 05:18:49,812 | INFO     | did not find any defunct processes belonging to 1224574
[2025-11-23 00:19:21] 2025-11-23 05:18:49,813 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 00:19:21] 2025-11-23 05:18:49,813 | INFO     | ready for new job
[2025-11-23 00:19:21] 2025-11-23 05:18:49,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 00:19:21] 2025-11-23 05:18:49,816 | INFO     | ***************************************
[2025-11-23 00:19:21] 2025-11-23 05:18:49,816 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 00:19:21] 2025-11-23 05:18:49,816 | INFO     | ***************************************
[2025-11-23 00:19:21] 2025-11-23 05:18:49,816 | INFO     | 
[2025-11-23 00:19:21] 2025-11-23 05:18:49,820 | INFO     | architecture information:
[2025-11-23 00:19:21] 2025-11-23 05:18:49,821 | INFO     | executing command: cat /etc/os-release
[2025-11-23 00:19:21] 2025-11-23 05:18:49,833 | INFO     | cat /etc/os-release:
[2025-11-23 00:19:21] NAME="CentOS Linux"
[2025-11-23 00:19:21] VERSION="7 (Core)"
[2025-11-23 00:19:21] ID="centos"
[2025-11-23 00:19:21] ID_LIKE="rhel fedora"
[2025-11-23 00:19:21] VERSION_ID="7"
[2025-11-23 00:19:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 00:19:21] ANSI_COLOR="0;31"
[2025-11-23 00:19:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 00:19:21] HOME_URL="https://www.centos.org/"
[2025-11-23 00:19:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 00:19:21] 
[2025-11-23 00:19:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 00:19:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 00:19:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 00:19:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 00:19:21] 
[2025-11-23 00:19:21] 2025-11-23 05:18:49,833 | INFO     | ***************************************
[2025-11-23 00:19:21] 2025-11-23 05:18:50,336 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/11
[2025-11-23 00:19:21] 2025-11-23 05:18:50,348 | INFO     | sufficient remaining disk space (377511477248 B)
[2025-11-23 00:19:21] 2025-11-23 05:18:50,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 00:19:21] 2025-11-23 05:18:50,348 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 00:19:21] 2025-11-23 05:18:50,348 | INFO     | update_server=False
[2025-11-23 00:19:21] 2025-11-23 05:18:50,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 00:19:21] 2025-11-23 05:18:50,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 00:19:21] 2025-11-23 05:18:50,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:19:21] 2025-11-23 05:18:50,349 | INFO     | aborting loop
[2025-11-23 00:19:21] 2025-11-23 05:18:50,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 00:19:21] 2025-11-23 05:18:51,146 | INFO     | all job control threads have been joined
[2025-11-23 00:19:21] 2025-11-23 05:18:51,198 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 00:19:21] 2025-11-23 05:18:51,317 | INFO     | all data control threads have been joined
[2025-11-23 00:19:21] 2025-11-23 05:18:51,353 | INFO     | [job] retrieve thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:51,355 | INFO     | [job] job monitor thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:51,355 | INFO     | [job] queue monitor thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:51,411 | INFO     | [data] copytool_in thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:51,534 | INFO     | all payload control threads have been joined
[2025-11-23 00:19:21] 2025-11-23 05:18:51,879 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:51,921 | INFO     | [payload] validate_post thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:52,003 | INFO     | [job] validate thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:52,037 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:52,104 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:52,151 | INFO     | [job] control thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:52,323 | INFO     | [data] control thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:52,399 | INFO     | [payload] failed_post thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:52,470 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:52,539 | INFO     | [payload] control thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:53,203 | INFO     | [data] copytool_out thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:18:54,354 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 00:19:21] 2025-11-23 05:19:00,124 | INFO     | [monitor] cgroup control has ended
[2025-11-23 00:19:21] 2025-11-23 05:19:01,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136883420464960)>', '<ExcThread(monitor, started 136882906175232)>']
[2025-11-23 00:19:21] 2025-11-23 05:19:06,389 | INFO     | all workflow threads have been joined
[2025-11-23 00:19:21] 2025-11-23 05:19:06,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 00:19:21] 2025-11-23 05:19:06,389 | INFO     | traces error code: 0
[2025-11-23 00:19:21] 2025-11-23 05:19:06,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 00:19:21] 2025-11-23 05:19:20,789 | INFO     | PID=1210732 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 00:19:21] 2025-11-23 05:19:20,790 | INFO     | .. there are 5 such processes running
[2025-11-23 00:19:21] 2025-11-23 05:19:20,790 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 00:19:21] 2025-11-23 05:19:20,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 00:19:21] 2025-11-23 05:19:20,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 00:19:21] 2025-11-23 05:19:20,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 00:19:21] 2025-11-23 05:19:20,790 | INFO     | [monitor] control thread has ended
[2025-11-23 00:19:21] 2025-11-23 05:19:20,895 [wrapper] ==== pilot stdout END ====
[2025-11-23 00:19:21] 2025-11-23 05:19:20,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 00:19:21] 2025-11-23 05:19:20,904 [wrapper] pilotpid: 1210732
[2025-11-23 00:19:21] 2025-11-23 05:19:20,907 [wrapper] Pilot exit status: 0
[2025-11-23 00:19:21] 2025-11-23 05:19:20,921 [wrapper] pandaids: 6893827725
[2025-11-23 00:19:21] 2025-11-23 05:19:21,011 [wrapper] cleanup supervisor_pilot 1746521 1210733
[2025-11-23 00:19:21] 2025-11-23 05:19:21,013 [wrapper] Test setup, not cleaning
[2025-11-23 00:19:21] 2025-11-23 05:19:21,016 [wrapper] apfmon messages muted
[2025-11-23 00:19:21] 2025-11-23 05:19:21,018 [wrapper] ==== wrapper stdout END ====
[2025-11-23 00:19:21] 2025-11-23 05:19:21,021 [wrapper] ==== wrapper stderr END ====
[2025-11-23 00:19:21]  *** Error codes and diagnostics ***
[2025-11-23 00:19:21]     "exeErrorCode": 0,
[2025-11-23 00:19:21]     "exeErrorDiag": "",
[2025-11-23 00:19:21]     "pilotErrorCode": 0,
[2025-11-23 00:19:21]     "pilotErrorDiag": "",
[2025-11-23 00:19:21]  *** Listing of results directory ***
[2025-11-23 00:19:21] total 1320204
[2025-11-23 00:19:21] -rw-r--r-- 1 whitlerd whitlerd    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-23 00:19:21] -rw-r--r-- 1 whitlerd whitlerd      5112 Nov 20 05:08 queuedata.json
[2025-11-23 00:19:21] -rwx------ 1 whitlerd whitlerd     36292 Nov 20 05:09 runpilot2-wrapper.sh
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd       100 Nov 22 15:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 00:19:21] -rwxr-xr-x 1 whitlerd whitlerd      7986 Nov 22 15:02 run_atlas
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd       105 Nov 22 15:02 job.xml
[2025-11-23 00:19:21] -rw-r--r-- 2 whitlerd whitlerd 413080316 Nov 22 15:02 EVNT.47493127._000002.pool.root.1
[2025-11-23 00:19:21] drwxrwx--x 2 whitlerd whitlerd      4096 Nov 22 15:02 shared
[2025-11-23 00:19:21] -rw-r--r-- 2 whitlerd whitlerd    590098 Nov 22 15:02 input.tar.gz
[2025-11-23 00:19:21] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 15:02 start_atlas.sh
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd      9475 Nov 22 15:02 init_data.xml
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 15:02 boinc_setup_complete
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 15:02 boinc_lockfile
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd      2782 Nov 22 15:03 pandaJob.out
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd    989768 Nov 22 15:03 agis_schedconf.cvmfs.json
[2025-11-23 00:19:21] drwx------ 5 whitlerd whitlerd      4096 Nov 22 15:03 pilot3
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd       532 Nov 23 00:12 boinc_task_state.xml
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd 922697230 Nov 23 00:18 HITS.47523449._000015.pool.root.1
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd      1039 Nov 23 00:18 memory_monitor_summary.json
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd   1526164 Nov 23 00:18 agis_ddmendpoints.agis.ALL.json
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd   1371120 Nov 23 00:18 log.47523449._000015.job.log.tgz.1
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd      8573 Nov 23 00:18 heartbeat.json
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd      8192 Nov 23 00:19 boinc_mmap_file
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd        29 Nov 23 00:19 wrapper_checkpoint.txt
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd        95 Nov 23 00:19 pilot_heartbeat.json
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd       822 Nov 23 00:19 pilotlog.txt
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd   4722865 Nov 23 00:19 log.47523449._000015.job.log.1
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd       353 Nov 23 00:19 output.list
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd       620 Nov 23 00:19 runtime_log
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd   6113280 Nov 23 00:19 result.tar.gz
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd      9042 Nov 23 00:19 runtime_log.err
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd       659 Nov 23 00:19 aVeNDmjmGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo8GKDmzVB0Wo.diag
[2025-11-23 00:19:21] -rw-rw-r-- 1 whitlerd whitlerd     21140 Nov 23 00:19 stderr.txt
[2025-11-23 00:19:21] HITS file was successfully produced:
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd 922697230 Nov 23 00:18 shared/HITS.pool.root.1
[2025-11-23 00:19:21]  *** Contents of shared directory: ***
[2025-11-23 00:19:21] total 1311048
[2025-11-23 00:19:21] -rw-r--r-- 2 whitlerd whitlerd 413080316 Nov 22 15:02 ATLAS.root_0
[2025-11-23 00:19:21] -rw-r--r-- 2 whitlerd whitlerd    590098 Nov 22 15:02 input.tar.gz
[2025-11-23 00:19:21] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 15:02 start_atlas.sh
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd 922697230 Nov 23 00:18 HITS.pool.root.1
[2025-11-23 00:19:21] -rw------- 1 whitlerd whitlerd   6113280 Nov 23 00:19 result.tar.gz
00:19:22 (1206439): run_atlas exited; CPU time 131548.764766
00:19:22 (1206439): called boinc_finish(0)

</stderr_txt>
]]>

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