Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
06:39:22 (505028): wrapper (7.7.26015): starting
06:39:22 (505028): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 06:39:22] Arguments: --nthreads 4
[2025-11-22 06:39:22] Threads: 4
[2025-11-22 06:39:22] Checking for CVMFS
[2025-11-22 06:39:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 06:39:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 06:39:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 06:39:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 06:39:23] 2.13.2.0 489841 0 26076 153170 3 22 1786217 4096000 228 130560 0 34663 99.916 12059 4203 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-22 06:39:23] CVMFS is ok
[2025-11-22 06:39:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 06:39:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-22 06:39:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-22 06:39:23] Further information can be found at the LHC@home message board.
[2025-11-22 06:39:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 06:39:23] Checking for apptainer binary...
[2025-11-22 06:39:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 06:39:23] Running /usr/bin/apptainer --version
[2025-11-22 06:39:23] apptainer version 1.4.3
[2025-11-22 06:39:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 06:39:23] SETI64-Ubuntu
[2025-11-22 06:39:23] apptainer works
[2025-11-22 06:39:23] Set ATHENA_PROC_NUMBER=4
[2025-11-22 06:39:23] Set ATHENA_CORE_NUMBER=4
[2025-11-22 06:39:23] Starting ATLAS job with PandaID=6895324428
[2025-11-22 06:39:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 14:59:18]  *** The last 200 lines of the pilot log: ***
[2025-11-22 14:59:18] 2025-11-22 19:58:38,703 | INFO     | monitor loop #2187: job 0:6895324428 is in state 'finished'
[2025-11-22 14:59:18] 2025-11-22 19:58:38,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 14:59:18] 2025-11-22 19:58:39,338 | INFO     | time since job start (29947s) is within the limit (172800.0s)
[2025-11-22 14:59:18] 2025-11-22 19:58:41,025 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 14:59:18] 2025-11-22 19:58:41,038 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 1942.0793984375
[2025-11-22 14:59:18] 2025-11-22 19:58:41,052 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/17/PanDA_Pilot-6895324428/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 14:59:18] 2025-11-22 19:58:41,052 | INFO     | extracted standard info from prmon json
[2025-11-22 14:59:18] 2025-11-22 19:58:41,052 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 14:59:18] 2025-11-22 19:58:41,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 14:59:18] 2025-11-22 19:58:41,057 | INFO     | fitting pss+swap vs Time
[2025-11-22 14:59:18] 2025-11-22 19:58:41,057 | INFO     | sum of square deviations: 36704650990.0
[2025-11-22 14:59:18] 2025-11-22 19:58:41,060 | INFO     | sum of deviations: 292471209389.99994
[2025-11-22 14:59:18] 2025-11-22 19:58:41,061 | INFO     | mean x: 1763826539.0
[2025-11-22 14:59:18] 2025-11-22 19:58:41,061 | INFO     | mean y: 2238329.8350305497
[2025-11-22 14:59:18] 2025-11-22 19:58:41,061 | INFO     | intersect: -14052342414.061804
[2025-11-22 14:59:18] 2025-11-22 19:58:41,061 | INFO     | chi2: 4.922870847420094
[2025-11-22 14:59:18] 2025-11-22 19:58:41,062 | INFO     | sum of square deviations: 35594704597.5
[2025-11-22 14:59:18] 2025-11-22 19:58:41,065 | INFO     | sum of deviations: 363668468644.5
[2025-11-22 14:59:18] 2025-11-22 19:58:41,065 | INFO     | mean x: 1763826386.5
[2025-11-22 14:59:18] 2025-11-22 19:58:41,065 | INFO     | mean y: 2248078.2901234566
[2025-11-22 14:59:18] 2025-11-22 19:58:41,065 | INFO     | intersect: -18018635875.843582
[2025-11-22 14:59:18] 2025-11-22 19:58:41,065 | INFO     | chi2: 3.541684066131659
[2025-11-22 14:59:18] 2025-11-22 19:58:41,065 | INFO     | current chi2=3.541684066131659 (change=28.056530916553847 %)
[2025-11-22 14:59:18] 2025-11-22 19:58:41,066 | INFO     | sum of square deviations: 34507363280.0
[2025-11-22 14:59:18] 2025-11-22 19:58:41,069 | INFO     | sum of deviations: 358004154403.99994
[2025-11-22 14:59:18] 2025-11-22 19:58:41,069 | INFO     | mean x: 1763826234.0
[2025-11-22 14:59:18] 2025-11-22 19:58:41,070 | INFO     | mean y: 2247283.8336798334
[2025-11-22 14:59:18] 2025-11-22 19:58:41,070 | INFO     | intersect: -18296952057.912193
[2025-11-22 14:59:18] 2025-11-22 19:58:41,070 | INFO     | chi2: 3.5403451579434244
[2025-11-22 14:59:18] 2025-11-22 19:58:41,070 | INFO     | current chi2=3.5403451579434244 (change=0.03780428076682893 %)
[2025-11-22 14:59:18] 2025-11-22 19:58:41,070 | INFO     | right removable region: 480
[2025-11-22 14:59:18] 2025-11-22 19:58:41,070 | INFO     | sum of square deviations: 35594704597.5
[2025-11-22 14:59:18] 2025-11-22 19:58:41,074 | INFO     | sum of deviations: 159244081218.5
[2025-11-22 14:59:18] 2025-11-22 19:58:41,074 | INFO     | mean x: 1763826691.5
[2025-11-22 14:59:18] 2025-11-22 19:58:41,074 | INFO     | mean y: 2256619.537037037
[2025-11-22 14:59:18] 2025-11-22 19:58:41,074 | INFO     | intersect: -7888775602.607369
[2025-11-22 14:59:18] 2025-11-22 19:58:41,074 | INFO     | chi2: 1.6779732338160647
[2025-11-22 14:59:18] 2025-11-22 19:58:41,074 | INFO     | current chi2=1.6779732338160647 (change=65.91474190927774 %)
[2025-11-22 14:59:18] 2025-11-22 19:58:41,074 | INFO     | sum of square deviations: 34507363280.0
[2025-11-22 14:59:18] 2025-11-22 19:58:41,078 | INFO     | sum of deviations: 128994686694.99957
[2025-11-22 14:59:18] 2025-11-22 19:58:41,078 | INFO     | mean x: 1763826844.0
[2025-11-22 14:59:18] 2025-11-22 19:58:41,078 | INFO     | mean y: 2260847.7047817046
[2025-11-22 14:59:18] 2025-11-22 19:58:41,078 | INFO     | intersect: -6591238901.314869
[2025-11-22 14:59:18] 2025-11-22 19:58:41,078 | INFO     | chi2: 1.4671210395846528
[2025-11-22 14:59:18] 2025-11-22 19:58:41,078 | INFO     | current chi2=1.4671210395846528 (change=12.56588543739101 %)
[2025-11-22 14:59:18] 2025-11-22 19:58:41,078 | INFO     | left removable region: 20
[2025-11-22 14:59:18] 2025-11-22 19:58:41,079 | INFO     | sum of square deviations: 30182128695.0
[2025-11-22 14:59:18] 2025-11-22 19:58:41,082 | INFO     | sum of deviations: 169345208925.99985
[2025-11-22 14:59:18] 2025-11-22 19:58:41,082 | INFO     | mean x: 1763826813.5
[2025-11-22 14:59:18] 2025-11-22 19:58:41,082 | INFO     | mean y: 2274336.3
[2025-11-22 14:59:18] 2025-11-22 19:58:41,082 | INFO     | intersect: -9894165482.768171
[2025-11-22 14:59:18] 2025-11-22 19:58:41,082 | INFO     | chi2: 0.039964925447423846
[2025-11-22 14:59:18] 2025-11-22 19:58:41,082 | INFO     | current memory leak: 5.61 B/s (using 460 data points, chi2=0.04)
[2025-11-22 14:59:18] 2025-11-22 19:58:41,082 | INFO     | could have reported an average CPU frequency of 2339 MHz (20 samples)
[2025-11-22 14:59:18] 2025-11-22 19:58:41,082 | INFO     | ..............................
[2025-11-22 14:59:18] 2025-11-22 19:58:41,083 | INFO     | . Timing measurements:
[2025-11-22 14:59:18] 2025-11-22 19:58:41,083 | INFO     | . get job = 0 s
[2025-11-22 14:59:18] 2025-11-22 19:58:41,083 | INFO     | . initial setup = 2 s
[2025-11-22 14:59:18] 2025-11-22 19:58:41,083 | INFO     | . payload setup = 4 s
[2025-11-22 14:59:18] 2025-11-22 19:58:41,083 | INFO     | . stage-in = 0 s
[2025-11-22 14:59:18] 2025-11-22 19:58:41,083 | INFO     | . payload execution = 29913 s
[2025-11-22 14:59:18] 2025-11-22 19:58:41,083 | INFO     | . stage-out = 4 s
[2025-11-22 14:59:18] 2025-11-22 19:58:41,083 | INFO     | . log creation = 0 s
[2025-11-22 14:59:18] 2025-11-22 19:58:41,083 | INFO     | ..............................
[2025-11-22 14:59:18] 2025-11-22 19:58:41,127 | INFO     | 
[2025-11-22 14:59:18] 2025-11-22 19:58:41,127 | INFO     | job summary report
[2025-11-22 14:59:18] 2025-11-22 19:58:41,127 | INFO     | --------------------------------------------------
[2025-11-22 14:59:18] 2025-11-22 19:58:41,127 | INFO     | PanDA job id: 6895324428
[2025-11-22 14:59:18] 2025-11-22 19:58:41,127 | INFO     | task id: 47556137
[2025-11-22 14:59:18] 2025-11-22 19:58:41,127 | INFO     | errors: (none)
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | pilot state: finished 
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | transexitcode: 0
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | exeerrorcode: 0
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | exeerrordiag: 
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | exitcode: 0
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | exitmsg: OK
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | cpuconsumptiontime: 118208 s
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | nevents: 1000
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | neventsw: 0
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | pid: 539072
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | pgrp: 539072
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | corecount: 4
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | event service: False
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | sizes: {0: 2298818, 3: 2299080, 11: 2299108, 29921: 2337900, 29922: 2337899, 29926: 2346979, 29928: 2347163, 29934: 2347409}
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | --------------------------------------------------
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | 
[2025-11-22 14:59:18] 2025-11-22 19:58:41,128 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/17
[2025-11-22 14:59:18] 2025-11-22 19:58:41,144 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,144 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,144 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,144 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | job 6895324428 has completed (purged errors)
[2025-11-22 14:59:18] 2025-11-22 19:58:41,145 | INFO     | overall cleanup function is called
[2025-11-22 14:59:18] 2025-11-22 19:58:42,157 | INFO     | --- collectZombieJob: --- 10, [539072]
[2025-11-22 14:59:18] 2025-11-22 19:58:42,158 | INFO     | zombie collector waiting for pid 539072
[2025-11-22 14:59:18] 2025-11-22 19:58:42,158 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 14:59:18] 2025-11-22 19:58:42,158 | INFO     | collected zombie processes
[2025-11-22 14:59:18] 2025-11-22 19:58:42,158 | INFO     | will attempt to kill all subprocesses of pid=539072
[2025-11-22 14:59:18] 2025-11-22 19:58:42,438 | INFO     | process IDs to be killed: [539072] (in reverse order)
[2025-11-22 14:59:18] 2025-11-22 19:58:42,521 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 14:59:18] 2025-11-22 19:58:42,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 14:59:18] 2025-11-22 19:58:42,528 | INFO     | did not find any defunct processes belonging to 539072
[2025-11-22 14:59:18] 2025-11-22 19:58:42,534 | INFO     | did not find any defunct processes belonging to 539072
[2025-11-22 14:59:18] 2025-11-22 19:58:42,535 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 14:59:18] 2025-11-22 19:58:42,535 | INFO     | ready for new job
[2025-11-22 14:59:18] 2025-11-22 19:58:42,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 14:59:18] 2025-11-22 19:58:42,536 | INFO     | ***************************************
[2025-11-22 14:59:18] 2025-11-22 19:58:42,536 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 14:59:18] 2025-11-22 19:58:42,536 | INFO     | ***************************************
[2025-11-22 14:59:18] 2025-11-22 19:58:42,536 | INFO     | 
[2025-11-22 14:59:18] 2025-11-22 19:58:42,541 | INFO     | architecture information:
[2025-11-22 14:59:18] 2025-11-22 19:58:42,541 | INFO     | executing command: cat /etc/os-release
[2025-11-22 14:59:18] 2025-11-22 19:58:42,552 | INFO     | cat /etc/os-release:
[2025-11-22 14:59:18] NAME="CentOS Linux"
[2025-11-22 14:59:18] VERSION="7 (Core)"
[2025-11-22 14:59:18] ID="centos"
[2025-11-22 14:59:18] ID_LIKE="rhel fedora"
[2025-11-22 14:59:18] VERSION_ID="7"
[2025-11-22 14:59:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 14:59:18] ANSI_COLOR="0;31"
[2025-11-22 14:59:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 14:59:18] HOME_URL="https://www.centos.org/"
[2025-11-22 14:59:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 14:59:18] 
[2025-11-22 14:59:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 14:59:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 14:59:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 14:59:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 14:59:18] 
[2025-11-22 14:59:18] 2025-11-22 19:58:42,552 | INFO     | ***************************************
[2025-11-22 14:59:18] 2025-11-22 19:58:43,055 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/17
[2025-11-22 14:59:18] 2025-11-22 19:58:43,069 | INFO     | sufficient remaining disk space (367338192896 B)
[2025-11-22 14:59:18] 2025-11-22 19:58:43,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 14:59:18] 2025-11-22 19:58:43,069 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 14:59:18] 2025-11-22 19:58:43,069 | INFO     | update_server=False
[2025-11-22 14:59:18] 2025-11-22 19:58:43,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 14:59:18] 2025-11-22 19:58:43,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 14:59:18] 2025-11-22 19:58:43,070 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 14:59:18] 2025-11-22 19:58:43,070 | INFO     | aborting loop
[2025-11-22 14:59:18] 2025-11-22 19:58:43,392 | INFO     | all payload control threads have been joined
[2025-11-22 14:59:18] 2025-11-22 19:58:43,639 | INFO     | all data control threads have been joined
[2025-11-22 14:59:18] 2025-11-22 19:58:43,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 14:59:18] 2025-11-22 19:58:44,075 | INFO     | [job] retrieve thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:44,075 | INFO     | [job] queue monitor thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:44,076 | INFO     | [job] job monitor thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:44,158 | INFO     | [job] validate thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:44,398 | INFO     | [payload] control thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:44,534 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:44,542 | INFO     | all job control threads have been joined
[2025-11-22 14:59:18] 2025-11-22 19:58:44,644 | INFO     | [data] control thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:44,672 | INFO     | [data] copytool_in thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:44,729 | INFO     | [payload] failed_post thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:45,227 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:45,343 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:45,372 | INFO     | [payload] validate_post thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:45,547 | INFO     | [job] control thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:45,560 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:45,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 14:59:18] 2025-11-22 19:58:45,719 | INFO     | [data] copytool_out thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:58:49,674 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 14:59:18] 2025-11-22 19:59:12,327 | INFO     | [monitor] cgroup control has ended
[2025-11-22 14:59:18] 2025-11-22 19:59:12,744 | INFO     | PID=514077 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 14:59:18] 2025-11-22 19:59:12,745 | INFO     | .. there are 7 such processes running
[2025-11-22 14:59:18] 2025-11-22 19:59:12,745 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 14:59:18] 2025-11-22 19:59:12,745 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 14:59:18] 2025-11-22 19:59:12,745 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 14:59:18] 2025-11-22 19:59:13,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126637146740544)>', '<ExcThread(monitor, started 126636791928576)>']
[2025-11-22 14:59:18] 2025-11-22 19:59:13,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 14:59:18] 2025-11-22 19:59:13,751 | INFO     | [monitor] control thread has ended
[2025-11-22 14:59:18] 2025-11-22 19:59:18,385 | INFO     | all workflow threads have been joined
[2025-11-22 14:59:18] 2025-11-22 19:59:18,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 14:59:18] 2025-11-22 19:59:18,386 | INFO     | traces error code: 0
[2025-11-22 14:59:18] 2025-11-22 19:59:18,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 14:59:18] 2025-11-22 19:59:18,456 [wrapper] ==== pilot stdout END ====
[2025-11-22 14:59:18] 2025-11-22 19:59:18,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 14:59:18] 2025-11-22 19:59:18,462 [wrapper] pilotpid: 514077
[2025-11-22 14:59:18] 2025-11-22 19:59:18,464 [wrapper] Pilot exit status: 0
[2025-11-22 14:59:18] 2025-11-22 19:59:18,473 [wrapper] pandaids: 6895324428
[2025-11-22 14:59:18] 2025-11-22 19:59:18,530 [wrapper] cleanup supervisor_pilot 1137562 514080
[2025-11-22 14:59:18] 2025-11-22 19:59:18,532 [wrapper] Test setup, not cleaning
[2025-11-22 14:59:18] 2025-11-22 19:59:18,535 [wrapper] apfmon messages muted
[2025-11-22 14:59:18] 2025-11-22 19:59:18,538 [wrapper] ==== wrapper stdout END ====
[2025-11-22 14:59:18] 2025-11-22 19:59:18,540 [wrapper] ==== wrapper stderr END ====
[2025-11-22 14:59:18]  *** Error codes and diagnostics ***
[2025-11-22 14:59:18]     "exeErrorCode": 0,
[2025-11-22 14:59:18]     "exeErrorDiag": "",
[2025-11-22 14:59:18]     "pilotErrorCode": 0,
[2025-11-22 14:59:18]     "pilotErrorDiag": "",
[2025-11-22 14:59:18]  *** Listing of results directory ***
[2025-11-22 14:59:18] total 1316256
[2025-11-22 14:59:18] -rw-r--r-- 1 whitlerd whitlerd    576529 Nov 21 08:51 pilot3.tar.gz
[2025-11-22 14:59:18] -rw-r--r-- 1 whitlerd whitlerd      5112 Nov 21 09:21 queuedata.json
[2025-11-22 14:59:18] -rwx------ 1 whitlerd whitlerd     36292 Nov 21 09:23 runpilot2-wrapper.sh
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd       100 Nov 22 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 14:59:18] -rwxr-xr-x 1 whitlerd whitlerd      7986 Nov 22 06:39 run_atlas
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd       105 Nov 22 06:39 job.xml
[2025-11-22 14:59:18] -rw-r--r-- 2 whitlerd whitlerd 411303479 Nov 22 06:39 EVNT.47483658._000023.pool.root.1
[2025-11-22 14:59:18] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 06:39 start_atlas.sh
[2025-11-22 14:59:18] drwxrwx--x 2 whitlerd whitlerd      4096 Nov 22 06:39 shared
[2025-11-22 14:59:18] -rw-r--r-- 2 whitlerd whitlerd    590104 Nov 22 06:39 input.tar.gz
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd      9474 Nov 22 06:39 init_data.xml
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 06:39 boinc_setup_complete
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd         0 Nov 22 06:39 boinc_lockfile
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd      2784 Nov 22 06:39 pandaJob.out
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd    989768 Nov 22 06:39 agis_schedconf.cvmfs.json
[2025-11-22 14:59:18] drwx------ 5 whitlerd whitlerd      4096 Nov 22 06:39 pilot3
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd       533 Nov 22 14:54 boinc_task_state.xml
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd 921448737 Nov 22 14:58 HITS.47556137._000228.pool.root.1
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd      1041 Nov 22 14:58 memory_monitor_summary.json
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd   1526164 Nov 22 14:58 agis_ddmendpoints.agis.ALL.json
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd   1324694 Nov 22 14:58 log.47556137._000228.job.log.tgz.1
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd      8578 Nov 22 14:58 heartbeat.json
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd        95 Nov 22 14:59 pilot_heartbeat.json
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd      8192 Nov 22 14:59 boinc_mmap_file
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd        29 Nov 22 14:59 wrapper_checkpoint.txt
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd      4838 Nov 22 14:59 pilotlog.txt
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd   4258504 Nov 22 14:59 log.47556137._000228.job.log.1
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd       353 Nov 22 14:59 output.list
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd       620 Nov 22 14:59 runtime_log
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd   5601280 Nov 22 14:59 result.tar.gz
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd      9042 Nov 22 14:59 runtime_log.err
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd       661 Nov 22 14:59 mObLDmFEhg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUfHKDmNNBjJo.diag
[2025-11-22 14:59:18] -rw-rw-r-- 1 whitlerd whitlerd     21361 Nov 22 14:59 stderr.txt
[2025-11-22 14:59:18] HITS file was successfully produced:
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd 921448737 Nov 22 14:58 shared/HITS.pool.root.1
[2025-11-22 14:59:18]  *** Contents of shared directory: ***
[2025-11-22 14:59:18] total 1307596
[2025-11-22 14:59:18] -rw-r--r-- 2 whitlerd whitlerd 411303479 Nov 22 06:39 ATLAS.root_0
[2025-11-22 14:59:18] -rw-r--r-- 2 whitlerd whitlerd     15847 Nov 22 06:39 start_atlas.sh
[2025-11-22 14:59:18] -rw-r--r-- 2 whitlerd whitlerd    590104 Nov 22 06:39 input.tar.gz
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd 921448737 Nov 22 14:58 HITS.pool.root.1
[2025-11-22 14:59:18] -rw------- 1 whitlerd whitlerd   5601280 Nov 22 14:59 result.tar.gz
14:59:20 (505028): run_atlas exited; CPU time 118932.214898
14:59:20 (505028): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN