Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:34:14 (10350): wrapper (7.7.26015): starting
06:34:14 (10350): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 06:34:14] Arguments: --nthreads 8
[2025-11-22 06:34:14] Threads: 8
[2025-11-22 06:34:14] Checking for CVMFS
[2025-11-22 06:34:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 06:34:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 06:34:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 06:34:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 06:34:15] 2.11.2.0 2822 67485 84884 153170 0 82 11818782 20275200 1 130560 0 18722525 99.859 4034211 31571 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 06:34:15] CVMFS is ok
[2025-11-22 06:34:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 06:34:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 06:34:15] Further information can be found at the LHC@home message board.
[2025-11-22 06:34:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 06:34:15] Checking for apptainer binary...
[2025-11-22 06:34:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 06:34:15] Running /usr/bin/apptainer --version
[2025-11-22 06:34:15] apptainer version 1.3.2-1.el7
[2025-11-22 06:34:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 06:34:16] c-204-37.aglt2.org
[2025-11-22 06:34:16] apptainer works
[2025-11-22 06:34:16] Set ATHENA_PROC_NUMBER=8
[2025-11-22 06:34:16] Set ATHENA_CORE_NUMBER=8
[2025-11-22 06:34:16] Starting ATLAS job with PandaID=6895324379
[2025-11-22 06:34:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 19:01:55]  *** The last 200 lines of the pilot log: ***
[2025-11-22 19:01:55] 2025-11-23 00:01:05,284 | INFO     | monitor loop #3260: job 0:6895324379 is in state 'finished'
[2025-11-22 19:01:55] 2025-11-23 00:01:05,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 19:01:55] 2025-11-23 00:01:05,328 | INFO     | time since job start (44790s) is within the limit (172800.0s)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,333 | INFO     | time since job start (44792s) is within the limit (172800.0s)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,631 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 19:01:55] 2025-11-23 00:01:07,634 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-22 19:01:55] 2025-11-23 00:01:07,637 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895324379/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,637 | INFO     | extracted standard info from prmon json
[2025-11-22 19:01:55] 2025-11-23 00:01:07,638 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 19:01:55] 2025-11-23 00:01:07,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 19:01:55] 2025-11-23 00:01:07,650 | INFO     | fitting pss+swap vs Time
[2025-11-22 19:01:55] 2025-11-23 00:01:07,651 | INFO     | sum of square deviations: 122621885067.72195
[2025-11-22 19:01:55] 2025-11-23 00:01:07,662 | INFO     | sum of deviations: 800888937606.506
[2025-11-22 19:01:55] 2025-11-23 00:01:07,662 | INFO     | mean x: 1763833666.1662126
[2025-11-22 19:01:55] 2025-11-23 00:01:07,662 | INFO     | mean y: 2867782.0204359675
[2025-11-22 19:01:55] 2025-11-23 00:01:07,662 | INFO     | intersect: -11517383029.898438
[2025-11-22 19:01:55] 2025-11-23 00:01:07,663 | INFO     | chi2: 5.883823462128288
[2025-11-22 19:01:55] 2025-11-23 00:01:07,664 | INFO     | sum of square deviations: 120133178242.9875
[2025-11-22 19:01:55] 2025-11-23 00:01:07,675 | INFO     | sum of deviations: 1034324533518.8187
[2025-11-22 19:01:55] 2025-11-23 00:01:07,675 | INFO     | mean x: 1763833513.6707819
[2025-11-22 19:01:55] 2025-11-23 00:01:07,675 | INFO     | mean y: 2882075.949245542
[2025-11-22 19:01:55] 2025-11-23 00:01:07,675 | INFO     | intersect: -15183399540.127821
[2025-11-22 19:01:55] 2025-11-23 00:01:07,676 | INFO     | chi2: 2.8944853458198225
[2025-11-22 19:01:55] 2025-11-23 00:01:07,676 | INFO     | current chi2=2.8944853458198225 (change=50.80604704661154 %)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,677 | INFO     | sum of square deviations: 117678379030.72226
[2025-11-22 19:01:55] 2025-11-23 00:01:07,687 | INFO     | sum of deviations: 1127241416897.731
[2025-11-22 19:01:55] 2025-11-23 00:01:07,688 | INFO     | mean x: 1763833361.1754143
[2025-11-22 19:01:55] 2025-11-23 00:01:07,688 | INFO     | mean y: 2887842.6477900553
[2025-11-22 19:01:55] 2025-11-23 00:01:07,688 | INFO     | intersect: -16892875283.931183
[2025-11-22 19:01:55] 2025-11-23 00:01:07,689 | INFO     | chi2: 2.308861871241946
[2025-11-22 19:01:55] 2025-11-23 00:01:07,689 | INFO     | current chi2=2.308861871241946 (change=20.232386922380734 %)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,689 | INFO     | right removable region: 723
[2025-11-22 19:01:55] 2025-11-23 00:01:07,690 | INFO     | sum of square deviations: 120132879952.98746
[2025-11-22 19:01:55] 2025-11-23 00:01:07,701 | INFO     | sum of deviations: 605170778885.0417
[2025-11-22 19:01:55] 2025-11-23 00:01:07,701 | INFO     | mean x: 1763833818.6707819
[2025-11-22 19:01:55] 2025-11-23 00:01:07,701 | INFO     | mean y: 2879754.208504801
[2025-11-22 19:01:55] 2025-11-23 00:01:07,701 | INFO     | intersect: -8882453605.705088
[2025-11-22 19:01:55] 2025-11-23 00:01:07,702 | INFO     | chi2: 3.7666804018181317
[2025-11-22 19:01:55] 2025-11-23 00:01:07,702 | INFO     | current chi2=3.7666804018181317 (change=35.98243682763974 %)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,703 | INFO     | sum of square deviations: 117677827164.07198
[2025-11-22 19:01:55] 2025-11-23 00:01:07,713 | INFO     | sum of deviations: 560820790631.751
[2025-11-22 19:01:55] 2025-11-23 00:01:07,713 | INFO     | mean x: 1763833971.1740332
[2025-11-22 19:01:55] 2025-11-23 00:01:07,714 | INFO     | mean y: 2882507.859116022
[2025-11-22 19:01:55] 2025-11-23 00:01:07,714 | INFO     | intersect: -8403074553.854646
[2025-11-22 19:01:55] 2025-11-23 00:01:07,714 | INFO     | chi2: 3.720030647641154
[2025-11-22 19:01:55] 2025-11-23 00:01:07,715 | INFO     | current chi2=3.720030647641154 (change=1.2384845328119798 %)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,715 | INFO     | left removable region: 20
[2025-11-22 19:01:55] 2025-11-23 00:01:07,715 | INFO     | sum of square deviations: 107732226420.39828
[2025-11-22 19:01:55] 2025-11-23 00:01:07,726 | INFO     | sum of deviations: 840453674056.8528
[2025-11-22 19:01:55] 2025-11-23 00:01:07,726 | INFO     | mean x: 1763833940.6899004
[2025-11-22 19:01:55] 2025-11-23 00:01:07,726 | INFO     | mean y: 2906693.4580369843
[2025-11-22 19:01:55] 2025-11-23 00:01:07,726 | INFO     | intersect: -13757327965.521578
[2025-11-22 19:01:55] 2025-11-23 00:01:07,727 | INFO     | chi2: 0.09934044083502284
[2025-11-22 19:01:55] 2025-11-23 00:01:07,727 | INFO     | current memory leak: 7.80 B/s (using 703 data points, chi2=0.10)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,727 | INFO     | could have reported an average CPU frequency of 2183 MHz (28 samples)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,728 | INFO     | ..............................
[2025-11-22 19:01:55] 2025-11-23 00:01:07,728 | INFO     | . Timing measurements:
[2025-11-22 19:01:55] 2025-11-23 00:01:07,728 | INFO     | . get job = 0 s
[2025-11-22 19:01:55] 2025-11-23 00:01:07,728 | INFO     | . initial setup = 2 s
[2025-11-22 19:01:55] 2025-11-23 00:01:07,728 | INFO     | . payload setup = 9 s
[2025-11-22 19:01:55] 2025-11-23 00:01:07,728 | INFO     | . stage-in = 0 s
[2025-11-22 19:01:55] 2025-11-23 00:01:07,728 | INFO     | . payload execution = 44748 s
[2025-11-22 19:01:55] 2025-11-23 00:01:07,728 | INFO     | . stage-out = 3 s
[2025-11-22 19:01:55] 2025-11-23 00:01:07,729 | INFO     | . log creation = 0 s
[2025-11-22 19:01:55] 2025-11-23 00:01:07,729 | INFO     | ..............................
[2025-11-22 19:01:55] 2025-11-23 00:01:07,818 | INFO     | 
[2025-11-22 19:01:55] 2025-11-23 00:01:07,819 | INFO     | job summary report
[2025-11-22 19:01:55] 2025-11-23 00:01:07,819 | INFO     | --------------------------------------------------
[2025-11-22 19:01:55] 2025-11-23 00:01:07,819 | INFO     | PanDA job id: 6895324379
[2025-11-22 19:01:55] 2025-11-23 00:01:07,819 | INFO     | task id: 47556149
[2025-11-22 19:01:55] 2025-11-23 00:01:07,819 | INFO     | errors: (none)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,820 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 19:01:55] 2025-11-23 00:01:07,820 | INFO     | pilot state: finished 
[2025-11-22 19:01:55] 2025-11-23 00:01:07,820 | INFO     | transexitcode: 0
[2025-11-22 19:01:55] 2025-11-23 00:01:07,820 | INFO     | exeerrorcode: 0
[2025-11-22 19:01:55] 2025-11-23 00:01:07,820 | INFO     | exeerrordiag: 
[2025-11-22 19:01:55] 2025-11-23 00:01:07,820 | INFO     | exitcode: 0
[2025-11-22 19:01:55] 2025-11-23 00:01:07,821 | INFO     | exitmsg: OK
[2025-11-22 19:01:55] 2025-11-23 00:01:07,821 | INFO     | cpuconsumptiontime: 347665 s
[2025-11-22 19:01:55] 2025-11-23 00:01:07,821 | INFO     | nevents: 1000
[2025-11-22 19:01:55] 2025-11-23 00:01:07,821 | INFO     | neventsw: 0
[2025-11-22 19:01:55] 2025-11-23 00:01:07,821 | INFO     | pid: 21688
[2025-11-22 19:01:55] 2025-11-23 00:01:07,821 | INFO     | pgrp: 21688
[2025-11-22 19:01:55] 2025-11-23 00:01:07,822 | INFO     | corecount: 8
[2025-11-22 19:01:55] 2025-11-23 00:01:07,822 | INFO     | event service: False
[2025-11-22 19:01:55] 2025-11-23 00:01:07,822 | INFO     | sizes: {0: 2298752, 7: 2299014, 11: 2299042, 44762: 2344826, 44766: 2353876, 44774: 2354066}
[2025-11-22 19:01:55] 2025-11-23 00:01:07,822 | INFO     | --------------------------------------------------
[2025-11-22 19:01:55] 2025-11-23 00:01:07,822 | INFO     | 
[2025-11-22 19:01:55] 2025-11-23 00:01:07,823 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 19:01:55] 2025-11-23 00:01:07,852 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,852 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,852 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,853 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,855 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,855 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,855 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,855 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,855 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,856 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,856 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 19:01:55] 2025-11-23 00:01:07,856 | INFO     | job 6895324379 has completed (purged errors)
[2025-11-22 19:01:55] 2025-11-23 00:01:07,856 | INFO     | overall cleanup function is called
[2025-11-22 19:01:55] 2025-11-23 00:01:08,871 | INFO     | --- collectZombieJob: --- 10, [21688]
[2025-11-22 19:01:55] 2025-11-23 00:01:08,871 | INFO     | zombie collector waiting for pid 21688
[2025-11-22 19:01:55] 2025-11-23 00:01:08,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 19:01:55] 2025-11-23 00:01:08,871 | INFO     | collected zombie processes
[2025-11-22 19:01:55] 2025-11-23 00:01:08,871 | INFO     | will attempt to kill all subprocesses of pid=21688
[2025-11-22 19:01:55] 2025-11-23 00:01:08,964 | INFO     | process IDs to be killed: [21688] (in reverse order)
[2025-11-22 19:01:55] 2025-11-23 00:01:09,024 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 19:01:55] 2025-11-23 00:01:09,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 19:01:55] 2025-11-23 00:01:09,029 | INFO     | did not find any defunct processes belonging to 21688
[2025-11-22 19:01:55] 2025-11-23 00:01:09,031 | INFO     | did not find any defunct processes belonging to 21688
[2025-11-22 19:01:55] 2025-11-23 00:01:09,034 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 19:01:55] 2025-11-23 00:01:09,034 | INFO     | ready for new job
[2025-11-22 19:01:55] 2025-11-23 00:01:09,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 19:01:55] 2025-11-23 00:01:09,037 | INFO     | ***************************************
[2025-11-22 19:01:55] 2025-11-23 00:01:09,038 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 19:01:55] 2025-11-23 00:01:09,038 | INFO     | ***************************************
[2025-11-22 19:01:55] 2025-11-23 00:01:09,038 | INFO     | 
[2025-11-22 19:01:55] 2025-11-23 00:01:09,038 | INFO     | architecture information:
[2025-11-22 19:01:55] 2025-11-23 00:01:09,039 | INFO     | executing command: cat /etc/os-release
[2025-11-22 19:01:55] 2025-11-23 00:01:09,058 | INFO     | cat /etc/os-release:
[2025-11-22 19:01:55] NAME="CentOS Linux"
[2025-11-22 19:01:55] VERSION="7 (Core)"
[2025-11-22 19:01:55] ID="centos"
[2025-11-22 19:01:55] ID_LIKE="rhel fedora"
[2025-11-22 19:01:55] VERSION_ID="7"
[2025-11-22 19:01:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 19:01:55] ANSI_COLOR="0;31"
[2025-11-22 19:01:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 19:01:55] HOME_URL="https://www.centos.org/"
[2025-11-22 19:01:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 19:01:55] 
[2025-11-22 19:01:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 19:01:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 19:01:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 19:01:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 19:01:55] 
[2025-11-22 19:01:55] 2025-11-23 00:01:09,058 | INFO     | ***************************************
[2025-11-22 19:01:55] 2025-11-23 00:01:09,562 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 19:01:55] 2025-11-23 00:01:09,583 | INFO     | sufficient remaining disk space (17434673152 B)
[2025-11-22 19:01:55] 2025-11-23 00:01:09,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 19:01:55] 2025-11-23 00:01:09,584 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 19:01:55] 2025-11-23 00:01:09,584 | INFO     | update_server=False
[2025-11-22 19:01:55] 2025-11-23 00:01:09,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 19:01:55] 2025-11-23 00:01:09,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:01:55] 2025-11-23 00:01:09,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 19:01:55] 2025-11-23 00:01:09,585 | INFO     | aborting loop
[2025-11-22 19:01:55] 2025-11-23 00:01:10,099 | INFO     | all job control threads have been joined
[2025-11-22 19:01:55] 2025-11-23 00:01:10,172 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 19:01:55] 2025-11-23 00:01:10,318 | INFO     | all payload control threads have been joined
[2025-11-22 19:01:55] 2025-11-23 00:01:10,400 | INFO     | all data control threads have been joined
[2025-11-22 19:01:55] 2025-11-23 00:01:10,590 | INFO     | [job] retrieve thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:10,591 | INFO     | [job] queue monitor thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:10,591 | INFO     | [job] job monitor thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:10,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 19:01:55] 2025-11-23 00:01:10,899 | INFO     | [payload] failed_post thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:11,105 | INFO     | [job] control thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:11,186 | INFO     | [payload] validate_post thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:11,257 | INFO     | [job] validate thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:11,263 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:11,324 | INFO     | [payload] control thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:11,391 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:11,405 | INFO     | [data] control thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:11,540 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:11,638 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:11,647 | INFO     | [data] copytool_in thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:12,179 | INFO     | [data] copytool_out thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:14,820 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 19:01:55] 2025-11-23 00:01:40,544 | INFO     | PID=14047 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 19:01:55] 2025-11-23 00:01:40,545 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 19:01:55] 2025-11-23 00:01:40,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 19:01:55] 2025-11-23 00:01:40,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 19:01:55] 2025-11-23 00:01:48,814 | INFO     | [monitor] cgroup control has ended
[2025-11-22 19:01:55] 2025-11-23 00:01:50,206 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770442270528)>', '<ExcThread(monitor, started 139769694639872)>']
[2025-11-22 19:01:55] 2025-11-23 00:01:50,597 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 19:01:55] 2025-11-23 00:01:50,597 | INFO     | [monitor] control thread has ended
[2025-11-22 19:01:55] 2025-11-23 00:01:55,231 | INFO     | all workflow threads have been joined
[2025-11-22 19:01:55] 2025-11-23 00:01:55,232 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 19:01:55] 2025-11-23 00:01:55,232 | INFO     | traces error code: 0
[2025-11-22 19:01:55] 2025-11-23 00:01:55,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 19:01:55] 2025-11-23 00:01:55,360 [wrapper] ==== pilot stdout END ====
[2025-11-22 19:01:55] 2025-11-23 00:01:55,365 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 19:01:55] 2025-11-23 00:01:55,369 [wrapper] pilotpid: 14047
[2025-11-22 19:01:55] 2025-11-23 00:01:55,374 [wrapper] Pilot exit status: 0
[2025-11-22 19:01:55] 2025-11-23 00:01:55,392 [wrapper] pandaids: 6895324379
[2025-11-22 19:01:55] 2025-11-23 00:01:55,448 [wrapper] cleanup supervisor_pilot 31108 14048
[2025-11-22 19:01:55] 2025-11-23 00:01:55,454 [wrapper] Test setup, not cleaning
[2025-11-22 19:01:55] 2025-11-23 00:01:55,459 [wrapper] apfmon messages muted
[2025-11-22 19:01:55] 2025-11-23 00:01:55,464 [wrapper] ==== wrapper stdout END ====
[2025-11-22 19:01:55] 2025-11-23 00:01:55,469 [wrapper] ==== wrapper stderr END ====
[2025-11-22 19:01:55]  *** Error codes and diagnostics ***
[2025-11-22 19:01:55]     "exeErrorCode": 0,
[2025-11-22 19:01:55]     "exeErrorDiag": "",
[2025-11-22 19:01:55]     "pilotErrorCode": 0,
[2025-11-22 19:01:55]     "pilotErrorDiag": "",
[2025-11-22 19:01:55]  *** Listing of results directory ***
[2025-11-22 19:01:55] total 1313988
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 08:51 pilot3.tar.gz
[2025-11-22 19:01:55] -rwx------ 1 boincer umatlas     36292 Nov 21 09:18 runpilot2-wrapper.sh
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 09:18 queuedata.json
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas       100 Nov 22 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 19:01:55] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 06:34 run_atlas
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas       105 Nov 22 06:34 job.xml
[2025-11-22 19:01:55] -rw-r--r-- 2 boincer umatlas 408922717 Nov 22 06:34 EVNT.47483658._001018.pool.root.1
[2025-11-22 19:01:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 06:34 start_atlas.sh
[2025-11-22 19:01:55] drwxrwx--x 2 boincer umatlas      4096 Nov 22 06:34 shared
[2025-11-22 19:01:55] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 06:34 input.tar.gz
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas         0 Nov 22 06:34 boinc_lockfile
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas      2783 Nov 22 06:34 pandaJob.out
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas        57 Nov 22 06:34 setup.sh.local
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas    989768 Nov 22 06:34 agis_schedconf.cvmfs.json
[2025-11-22 19:01:55] drwx------ 5 boincer umatlas      4096 Nov 22 06:34 pilot3
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas       532 Nov 22 18:49 boinc_task_state.xml
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas      5912 Nov 22 18:54 init_data.xml
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas 916474744 Nov 22 19:00 HITS.47556149._000045.pool.root.1
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas      1075 Nov 22 19:00 memory_monitor_summary.json
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas   1526164 Nov 22 19:00 agis_ddmendpoints.agis.ALL.json
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas   1985396 Nov 22 19:00 log.47556149._000045.job.log.tgz.1
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas      8671 Nov 22 19:01 heartbeat.json
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas        95 Nov 22 19:01 pilot_heartbeat.json
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 19:01 boinc_mmap_file
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas        29 Nov 22 19:01 wrapper_checkpoint.txt
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas      4746 Nov 22 19:01 pilotlog.txt
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas   6114660 Nov 22 19:01 log.47556149._000045.job.log.1
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas       353 Nov 22 19:01 output.list
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas       620 Nov 22 19:01 runtime_log
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas   8120320 Nov 22 19:01 result.tar.gz
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas      9343 Nov 22 19:01 runtime_log.err
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas       668 Nov 22 19:01 CUHODmI9gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjTJKDm6X9mwm.diag
[2025-11-22 19:01:55] -rw-r--r-- 1 boincer umatlas     21287 Nov 22 19:01 stderr.txt
[2025-11-22 19:01:55] HITS file was successfully produced:
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas 916474744 Nov 22 19:00 shared/HITS.pool.root.1
[2025-11-22 19:01:55]  *** Contents of shared directory: ***
[2025-11-22 19:01:55] total 1302872
[2025-11-22 19:01:55] -rw-r--r-- 2 boincer umatlas 408922717 Nov 22 06:34 ATLAS.root_0
[2025-11-22 19:01:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 06:34 start_atlas.sh
[2025-11-22 19:01:55] -rw-r--r-- 2 boincer umatlas    590098 Nov 22 06:34 input.tar.gz
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas 916474744 Nov 22 19:00 HITS.pool.root.1
[2025-11-22 19:01:55] -rw------- 1 boincer umatlas   8120320 Nov 22 19:01 result.tar.gz
19:01:56 (10350): run_atlas exited; CPU time 344702.030272
19:01:57 (10350): called boinc_finish(0)

</stderr_txt>
]]>

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