Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:26:14 (2054): wrapper (7.7.26015): starting
01:26:14 (2054): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 01:26:14] Arguments: --nthreads 8
[2025-11-25 01:26:14] Threads: 8
[2025-11-25 01:26:14] Checking for CVMFS
[2025-11-25 01:26:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:26:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:26:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:26:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:26:17] 2.11.2.0 347 283008 142372 153264 3 84 17698772 25165825 4632 130560 10 133913526 99.881 78894497 3144 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 01:26:17] CVMFS is ok
[2025-11-25 01:26:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:26:17] Checking for apptainer binary...
[2025-11-25 01:26:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:26:17] Running /usr/bin/apptainer --version
[2025-11-25 01:26:17] apptainer version 1.3.2-1.el7
[2025-11-25 01:26:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:26:43] cg-vwn289.simple-grid.lan
[2025-11-25 01:26:43] apptainer works
[2025-11-25 01:26:43] Set ATHENA_PROC_NUMBER=8
[2025-11-25 01:26:43] Set ATHENA_CORE_NUMBER=8
[2025-11-25 01:26:44] Starting ATLAS job with PandaID=6891570087
[2025-11-25 01:26:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:26:59]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:26:59] 2025-11-26 01:26:08,506 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:26:59] 2025-11-26 01:26:08,509 | INFO     | sum of square deviations: 968994196705.9977
[2025-11-26 02:26:59] 2025-11-26 01:26:08,574 | INFO     | sum of deviations: 4828376999848.044
[2025-11-26 02:26:59] 2025-11-26 01:26:08,574 | INFO     | mean x: 1764075767.766074
[2025-11-26 02:26:59] 2025-11-26 01:26:08,575 | INFO     | mean y: 2852797.976744186
[2025-11-26 02:26:59] 2025-11-26 01:26:08,575 | INFO     | intersect: -8787316319.67724
[2025-11-26 02:26:59] 2025-11-26 01:26:08,577 | INFO     | chi2: 16.894139564655084
[2025-11-26 02:26:59] 2025-11-26 01:26:08,579 | INFO     | sum of square deviations: 959086938275.4546
[2025-11-26 02:26:59] 2025-11-26 01:26:08,645 | INFO     | sum of deviations: 5309819550695.003
[2025-11-26 02:26:59] 2025-11-26 01:26:08,646 | INFO     | mean x: 1764075615.2704186
[2025-11-26 02:26:59] 2025-11-26 01:26:08,646 | INFO     | mean y: 2860207.5964310225
[2025-11-26 02:26:59] 2025-11-26 01:26:08,646 | INFO     | intersect: -9763640426.54833
[2025-11-26 02:26:59] 2025-11-26 01:26:08,648 | INFO     | chi2: 13.893025388189255
[2025-11-26 02:26:59] 2025-11-26 01:26:08,648 | INFO     | current chi2=13.893025388189255 (change=17.764232176373056 %)
[2025-11-26 02:26:59] 2025-11-26 01:26:08,648 | INFO     | right removable region: 1456
[2025-11-26 02:26:59] 2025-11-26 01:26:08,650 | INFO     | sum of square deviations: 959085809165.4556
[2025-11-26 02:26:59] 2025-11-26 01:26:08,724 | INFO     | sum of deviations: 4200268461130.1055
[2025-11-26 02:26:59] 2025-11-26 01:26:08,724 | INFO     | mean x: 1764075920.2704186
[2025-11-26 02:26:59] 2025-11-26 01:26:08,724 | INFO     | mean y: 2862465.2230610843
[2025-11-26 02:26:59] 2025-11-26 01:26:08,724 | INFO     | intersect: -7722820033.8208275
[2025-11-26 02:26:59] 2025-11-26 01:26:08,726 | INFO     | chi2: 11.863695792789912
[2025-11-26 02:26:59] 2025-11-26 01:26:08,726 | INFO     | current chi2=11.863695792789912 (change=29.77626503328745 %)
[2025-11-26 02:26:59] 2025-11-26 01:26:08,729 | INFO     | sum of square deviations: 949245190337.3574
[2025-11-26 02:26:59] 2025-11-26 01:26:08,793 | INFO     | sum of deviations: 3652972629823.522
[2025-11-26 02:26:59] 2025-11-26 01:26:08,794 | INFO     | mean x: 1764076072.7747934
[2025-11-26 02:26:59] 2025-11-26 01:26:08,794 | INFO     | mean y: 2870946.3257575757
[2025-11-26 02:26:59] 2025-11-26 01:26:08,794 | INFO     | intersect: -6785808813.518668
[2025-11-26 02:26:59] 2025-11-26 01:26:08,796 | INFO     | chi2: 8.180795165426616
[2025-11-26 02:26:59] 2025-11-26 01:26:08,796 | INFO     | current chi2=8.180795165426616 (change=31.04345131305167 %)
[2025-11-26 02:26:59] 2025-11-26 01:26:08,798 | INFO     | sum of square deviations: 939472107659.2032
[2025-11-26 02:26:59] 2025-11-26 01:26:08,894 | INFO     | sum of deviations: 3154000313619.752
[2025-11-26 02:26:59] 2025-11-26 01:26:08,894 | INFO     | mean x: 1764076225.2791984
[2025-11-26 02:26:59] 2025-11-26 01:26:08,894 | INFO     | mean y: 2878732.9585348996
[2025-11-26 02:26:59] 2025-11-26 01:26:08,894 | INFO     | intersect: -5919486521.336021
[2025-11-26 02:26:59] 2025-11-26 01:26:08,896 | INFO     | chi2: 5.1824339376689
[2025-11-26 02:26:59] 2025-11-26 01:26:08,897 | INFO     | current chi2=5.1824339376689 (change=36.651219925775465 %)
[2025-11-26 02:26:59] 2025-11-26 01:26:08,899 | INFO     | sum of square deviations: 929766681152.7523
[2025-11-26 02:26:59] 2025-11-26 01:26:08,965 | INFO     | sum of deviations: 2953798146476.9453
[2025-11-26 02:26:59] 2025-11-26 01:26:08,965 | INFO     | mean x: 1764076377.78086
[2025-11-26 02:26:59] 2025-11-26 01:26:08,965 | INFO     | mean y: 2881875.6137309293
[2025-11-26 02:26:59] 2025-11-26 01:26:08,966 | INFO     | intersect: -5601454825.796621
[2025-11-26 02:26:59] 2025-11-26 01:26:08,968 | INFO     | chi2: 4.633380413979881
[2025-11-26 02:26:59] 2025-11-26 01:26:08,969 | INFO     | current chi2=4.633380413979881 (change=10.594510808872707 %)
[2025-11-26 02:26:59] 2025-11-26 01:26:08,969 | INFO     | left removable region: 40
[2025-11-26 02:26:59] 2025-11-26 01:26:08,971 | INFO     | sum of square deviations: 880376201472.1628
[2025-11-26 02:26:59] 2025-11-26 01:26:09,033 | INFO     | sum of deviations: 3192034195318.835
[2025-11-26 02:26:59] 2025-11-26 01:26:09,033 | INFO     | mean x: 1764076804.786017
[2025-11-26 02:26:59] 2025-11-26 01:26:09,033 | INFO     | mean y: 2894995.547316384
[2025-11-26 02:26:59] 2025-11-26 01:26:09,034 | INFO     | intersect: -6393226883.519407
[2025-11-26 02:26:59] 2025-11-26 01:26:09,035 | INFO     | chi2: 1.2797808516825908
[2025-11-26 02:26:59] 2025-11-26 01:26:09,036 | INFO     | current memory leak: 3.63 B/s (using 1416 data points, chi2=1.28)
[2025-11-26 02:26:59] 2025-11-26 01:26:09,037 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-26 02:26:59] 2025-11-26 01:26:09,038 | INFO     | ..............................
[2025-11-26 02:26:59] 2025-11-26 01:26:09,038 | INFO     | . Timing measurements:
[2025-11-26 02:26:59] 2025-11-26 01:26:09,038 | INFO     | . get job = 0 s
[2025-11-26 02:26:59] 2025-11-26 01:26:09,038 | INFO     | . initial setup = 15 s
[2025-11-26 02:26:59] 2025-11-26 01:26:09,038 | INFO     | . payload setup = 166 s
[2025-11-26 02:26:59] 2025-11-26 01:26:09,038 | INFO     | . stage-in = 0 s
[2025-11-26 02:26:59] 2025-11-26 01:26:09,038 | INFO     | . payload execution = 89302 s
[2025-11-26 02:26:59] 2025-11-26 01:26:09,038 | INFO     | . stage-out = 4 s
[2025-11-26 02:26:59] 2025-11-26 01:26:09,039 | INFO     | . log creation = 1 s
[2025-11-26 02:26:59] 2025-11-26 01:26:09,039 | INFO     | ..............................
[2025-11-26 02:26:59] 2025-11-26 01:26:09,164 | INFO     | 
[2025-11-26 02:26:59] 2025-11-26 01:26:09,164 | INFO     | job summary report
[2025-11-26 02:26:59] 2025-11-26 01:26:09,164 | INFO     | --------------------------------------------------
[2025-11-26 02:26:59] 2025-11-26 01:26:09,164 | INFO     | PanDA job id: 6891570087
[2025-11-26 02:26:59] 2025-11-26 01:26:09,165 | INFO     | task id: 47493068
[2025-11-26 02:26:59] 2025-11-26 01:26:09,165 | INFO     | errors: (none)
[2025-11-26 02:26:59] 2025-11-26 01:26:09,165 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:26:59] 2025-11-26 01:26:09,165 | INFO     | pilot state: finished 
[2025-11-26 02:26:59] 2025-11-26 01:26:09,165 | INFO     | transexitcode: 0
[2025-11-26 02:26:59] 2025-11-26 01:26:09,165 | INFO     | exeerrorcode: 0
[2025-11-26 02:26:59] 2025-11-26 01:26:09,165 | INFO     | exeerrordiag: 
[2025-11-26 02:26:59] 2025-11-26 01:26:09,165 | INFO     | exitcode: 0
[2025-11-26 02:26:59] 2025-11-26 01:26:09,165 | INFO     | exitmsg: OK
[2025-11-26 02:26:59] 2025-11-26 01:26:09,166 | INFO     | cpuconsumptiontime: 335907 s
[2025-11-26 02:26:59] 2025-11-26 01:26:09,166 | INFO     | nevents: 1000
[2025-11-26 02:26:59] 2025-11-26 01:26:09,166 | INFO     | neventsw: 0
[2025-11-26 02:26:59] 2025-11-26 01:26:09,166 | INFO     | pid: 12351
[2025-11-26 02:26:59] 2025-11-26 01:26:09,166 | INFO     | pgrp: 12351
[2025-11-26 02:26:59] 2025-11-26 01:26:09,166 | INFO     | corecount: 8
[2025-11-26 02:26:59] 2025-11-26 01:26:09,166 | INFO     | event service: False
[2025-11-26 02:26:59] 2025-11-26 01:26:09,166 | INFO     | sizes: {0: 2284293, 1: 2284293, 12: 2284321, 23: 2284349, 33: 2284377, 44: 2284433, 55: 2284589, 66: 2284617, 76: 2284645, 87: 2284701, 98: 2284729, 105: 2285299, 
[2025-11-26 02:26:59] 2025-11-26 01:26:09,166 | INFO     | --------------------------------------------------
[2025-11-26 02:26:59] 2025-11-26 01:26:09,166 | INFO     | 
[2025-11-26 02:26:59] 2025-11-26 01:26:09,167 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-26 02:26:59] 2025-11-26 01:26:09,195 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,196 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,196 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,196 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,196 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,196 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,196 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,197 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,197 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,197 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,197 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,197 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:26:59] 2025-11-26 01:26:09,198 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,198 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:26:59] 2025-11-26 01:26:09,198 | INFO     | job 6891570087 has completed (purged errors)
[2025-11-26 02:26:59] 2025-11-26 01:26:09,198 | INFO     | overall cleanup function is called
[2025-11-26 02:26:59] 2025-11-26 01:26:10,215 | INFO     | --- collectZombieJob: --- 10, [12351]
[2025-11-26 02:26:59] 2025-11-26 01:26:10,215 | INFO     | zombie collector waiting for pid 12351
[2025-11-26 02:26:59] 2025-11-26 01:26:10,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:26:59] 2025-11-26 01:26:10,215 | INFO     | collected zombie processes
[2025-11-26 02:26:59] 2025-11-26 01:26:10,215 | INFO     | will attempt to kill all subprocesses of pid=12351
[2025-11-26 02:26:59] 2025-11-26 01:26:10,344 | INFO     | process IDs to be killed: [12351] (in reverse order)
[2025-11-26 02:26:59] 2025-11-26 01:26:10,657 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:26:59] 2025-11-26 01:26:10,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:26:59] 2025-11-26 01:26:10,663 | INFO     | did not find any defunct processes belonging to 12351
[2025-11-26 02:26:59] 2025-11-26 01:26:10,666 | INFO     | did not find any defunct processes belonging to 12351
[2025-11-26 02:26:59] 2025-11-26 01:26:10,671 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:26:59] 2025-11-26 01:26:10,672 | INFO     | ready for new job
[2025-11-26 02:26:59] 2025-11-26 01:26:10,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:26:59] 2025-11-26 01:26:10,678 | INFO     | ***************************************
[2025-11-26 02:26:59] 2025-11-26 01:26:10,678 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:26:59] 2025-11-26 01:26:10,678 | INFO     | ***************************************
[2025-11-26 02:26:59] 2025-11-26 01:26:10,678 | INFO     | 
[2025-11-26 02:26:59] 2025-11-26 01:26:10,679 | INFO     | pilot is running in a VM
[2025-11-26 02:26:59] 2025-11-26 01:26:10,679 | INFO     | architecture information:
[2025-11-26 02:26:59] 2025-11-26 01:26:10,684 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:26:59] 2025-11-26 01:26:10,730 | INFO     | cat /etc/os-release:
[2025-11-26 02:26:59] NAME="CentOS Linux"
[2025-11-26 02:26:59] VERSION="7 (Core)"
[2025-11-26 02:26:59] ID="centos"
[2025-11-26 02:26:59] ID_LIKE="rhel fedora"
[2025-11-26 02:26:59] VERSION_ID="7"
[2025-11-26 02:26:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:26:59] ANSI_COLOR="0;31"
[2025-11-26 02:26:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:26:59] HOME_URL="https://www.centos.org/"
[2025-11-26 02:26:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:26:59] 
[2025-11-26 02:26:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:26:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:26:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:26:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:26:59] 
[2025-11-26 02:26:59] 2025-11-26 01:26:10,731 | INFO     | ***************************************
[2025-11-26 02:26:59] 2025-11-26 01:26:11,237 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-26 02:26:59] 2025-11-26 01:26:11,340 | INFO     | sufficient remaining disk space (495548628992 B)
[2025-11-26 02:26:59] 2025-11-26 01:26:11,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:26:59] 2025-11-26 01:26:11,341 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:26:59] 2025-11-26 01:26:11,341 | INFO     | update_server=False
[2025-11-26 02:26:59] 2025-11-26 01:26:11,341 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:26:59] 2025-11-26 01:26:11,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:26:59] 2025-11-26 01:26:11,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:26:59] 2025-11-26 01:26:11,341 | INFO     | aborting loop
[2025-11-26 02:26:59] 2025-11-26 01:26:11,578 | INFO     | all data control threads have been joined
[2025-11-26 02:26:59] 2025-11-26 01:26:12,348 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:12,349 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:12,552 | INFO     | [job] validate thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:12,584 | INFO     | [data] control thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:12,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:26:59] 2025-11-26 01:26:12,688 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:12,795 | INFO     | all payload control threads have been joined
[2025-11-26 02:26:59] 2025-11-26 01:26:12,936 | INFO     | all job control threads have been joined
[2025-11-26 02:26:59] 2025-11-26 01:26:13,088 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:13,131 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:13,263 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:13,321 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:13,327 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:13,348 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:13,801 | INFO     | [payload] control thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:13,942 | INFO     | [job] control thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:14,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:26:59] 2025-11-26 01:26:15,188 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:16,619 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:22,117 | INFO     | job.realtimelogging is not enabled
[2025-11-26 02:26:59] 2025-11-26 01:26:23,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:26:59] 2025-11-26 01:26:41,286 | INFO     | PID=5803 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 02:26:59] 2025-11-26 01:26:41,286 | INFO     | .. there are 9 such processes running
[2025-11-26 02:26:59] 2025-11-26 01:26:41,286 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:26:59] 2025-11-26 01:26:41,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:26:59] 2025-11-26 01:26:41,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:26:59] 2025-11-26 01:26:48,723 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:26:59] 2025-11-26 01:26:50,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750880098112)>', '<ExcThread(monitor, started 139750451181312)>']
[2025-11-26 02:26:59] 2025-11-26 01:26:51,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:26:59] 2025-11-26 01:26:51,347 | INFO     | [monitor] control thread has ended
[2025-11-26 02:26:59] 2025-11-26 01:26:55,480 | INFO     | all workflow threads have been joined
[2025-11-26 02:26:59] 2025-11-26 01:26:55,480 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:26:59] 2025-11-26 01:26:55,480 | INFO     | traces error code: 0
[2025-11-26 02:26:59] 2025-11-26 01:26:55,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:26:59] 2025-11-26 01:26:55,712 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:26:59] 2025-11-26 01:26:55,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:26:59] 2025-11-26 01:26:55,867 [wrapper] pilotpid: 5803
[2025-11-26 02:26:59] 2025-11-26 01:26:55,957 [wrapper] Pilot exit status: 0
[2025-11-26 02:26:59] 2025-11-26 01:26:56,412 [wrapper] pandaids: 6891570087
[2025-11-26 02:26:59] 2025-11-26 01:26:57,519 [wrapper] cleanup supervisor_pilot 21833 5804
[2025-11-26 02:26:59] 2025-11-26 01:26:57,615 [wrapper] Test setup, not cleaning
[2025-11-26 02:26:59] 2025-11-26 01:26:57,675 [wrapper] apfmon messages muted
[2025-11-26 02:26:59] 2025-11-26 01:26:57,783 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:26:59] 2025-11-26 01:26:57,870 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:26:59]  *** Error codes and diagnostics ***
[2025-11-26 02:26:59]     "exeErrorCode": 0,
[2025-11-26 02:26:59]     "exeErrorDiag": "",
[2025-11-26 02:26:59]     "pilotErrorCode": 0,
[2025-11-26 02:26:59]     "pilotErrorDiag": "",
[2025-11-26 02:26:59]  *** Listing of results directory ***
[2025-11-26 02:26:59] total 1322764
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-26 02:26:59] -rwx------. 1 boinc boinc     36292 Nov 18 16:35 runpilot2-wrapper.sh
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:35 queuedata.json
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc       100 Nov 25 01:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:26:59] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 01:26 run_atlas
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc       105 Nov 25 01:26 job.xml
[2025-11-26 02:26:59] -rw-r--r--. 2 boinc boinc 408204195 Nov 25 01:26 EVNT.47493065._000230.pool.root.1
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc      6391 Nov 25 01:26 init_data.xml
[2025-11-26 02:26:59] -rw-r--r--. 2 boinc boinc     15120 Nov 25 01:26 start_atlas.sh
[2025-11-26 02:26:59] drwxrwx--x. 2 boinc boinc        68 Nov 25 01:26 shared
[2025-11-26 02:26:59] -rw-r--r--. 2 boinc boinc    590101 Nov 25 01:26 input.tar.gz
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc         0 Nov 25 01:26 boinc_lockfile
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc      2770 Nov 25 01:26 pandaJob.out
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc    991801 Nov 25 01:31 agis_schedconf.cvmfs.json
[2025-11-26 02:26:59] drwx------. 5 boinc boinc      4096 Nov 25 01:31 pilot3
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc       533 Nov 26 02:10 boinc_task_state.xml
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc 913445500 Nov 26 02:25 HITS.47493068._002291.pool.root.1
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc      1030 Nov 26 02:25 memory_monitor_summary.json
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc   1516240 Nov 26 02:25 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc   2538080 Nov 26 02:25 log.47493068._002291.job.log.tgz.1
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc        95 Nov 26 02:25 pilot_heartbeat.json
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc      7943 Nov 26 02:26 heartbeat.json
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc        29 Nov 26 02:26 wrapper_checkpoint.txt
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc      8192 Nov 26 02:26 boinc_mmap_file
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc      4955 Nov 26 02:26 pilotlog.txt
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc  11939242 Nov 26 02:26 log.47493068._002291.job.log.1
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc       353 Nov 26 02:26 output.list
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc       620 Nov 26 02:26 runtime_log
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc  14499840 Nov 26 02:26 result.tar.gz
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc      8703 Nov 26 02:26 runtime_log.err
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc       662 Nov 26 02:26 rfHMDmgucf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdLFKDmNlKMKm.diag
[2025-11-26 02:26:59] -rw-r--r--. 1 boinc boinc     20809 Nov 26 02:26 stderr.txt
[2025-11-26 02:26:59] HITS file was successfully produced:
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc 913445500 Nov 26 02:25 shared/HITS.pool.root.1
[2025-11-26 02:26:59]  *** Contents of shared directory: ***
[2025-11-26 02:26:59] total 1305436
[2025-11-26 02:26:59] -rw-r--r--. 2 boinc boinc 408204195 Nov 25 01:26 ATLAS.root_0
[2025-11-26 02:26:59] -rw-r--r--. 2 boinc boinc     15120 Nov 25 01:26 start_atlas.sh
[2025-11-26 02:26:59] -rw-r--r--. 2 boinc boinc    590101 Nov 25 01:26 input.tar.gz
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc 913445500 Nov 26 02:25 HITS.pool.root.1
[2025-11-26 02:26:59] -rw-------. 1 boinc boinc  14499840 Nov 26 02:26 result.tar.gz
02:27:01 (2054): run_atlas exited; CPU time 336496.939267
02:27:01 (2054): called boinc_finish(0)

</stderr_txt>
]]>

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