Stderr output

<core_client_version>7.16.16</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-22 17:29:13 (45914): vboxwrapper version 26210
2025-11-22 17:29:13 (45914): BOINC client version: 7.16.16
2025-11-22 17:29:14 (45914): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-11-22 17:29:14 (45914): Successfully copied 'init_data.xml' to the shared directory.
2025-11-22 17:29:14 (45914): Create VM. (boinc_d5cfe8ce06bf8a71, slot#0)
2025-11-22 17:29:14 (45914): Setting Memory Size for VM. (4400MB)
2025-11-22 17:29:14 (45914): Setting CPU Count for VM. (4)
2025-11-22 17:29:14 (45914): Setting Chipset Options for VM.
2025-11-22 17:29:14 (45914): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-22 17:29:14 (45914): Setting Boot Options for VM.
2025-11-22 17:29:14 (45914): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-22 17:29:14 (45914): Enabling VM Network Access.
2025-11-22 17:29:14 (45914): Disabling USB Support for VM.
2025-11-22 17:29:14 (45914): Disabling COM Port Support for VM.
2025-11-22 17:29:14 (45914): Disabling LPT Port Support for VM.
2025-11-22 17:29:15 (45914): Disabling Audio Support for VM.
2025-11-22 17:29:15 (45914): Disabling Clipboard Support for VM.
2025-11-22 17:29:15 (45914): Disabling Drag and Drop Support for VM.
2025-11-22 17:29:15 (45914): Adding storage controller(s) to VM.
2025-11-22 17:29:15 (45914): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-22 17:29:15 (45914): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-22 17:29:15 (45914): forwarding host port 41579 to guest port 80
2025-11-22 17:29:15 (45914): Enabling remote desktop for VM.
2025-11-22 17:29:16 (45914): Enabling shared directory for VM.
2025-11-22 17:29:16 (45914): Starting VM using VBoxManage interface. (boinc_d5cfe8ce06bf8a71, slot#0)
2025-11-22 17:29:17 (45914): Successfully started VM. (PID = '46399')
2025-11-22 17:29:17 (45914): Reporting VM Process ID to BOINC.
2025-11-22 17:29:17 (45914): Guest Log: BIOS: VirtualBox 7.0.12
2025-11-22 17:29:17 (45914): Guest Log: CPUID EDX: 0x178bfbff
2025-11-22 17:29:17 (45914): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-22 17:29:17 (45914): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-22 17:29:17 (45914): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-22 17:29:17 (45914): Detected: Web Application Enabled (http://localhost:41579)
2025-11-22 17:29:17 (45914): Detected: Remote Desktop Enabled (localhost:56731)
2025-11-22 17:29:17 (45914): Preference change detected
2025-11-22 17:29:17 (45914): Setting CPU throttle for VM. (100%)
2025-11-22 17:29:17 (45914): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-22 17:29:19 (45914): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-22 17:29:19 (45914): Guest Log: BIOS: Booting from Hard Disk...
2025-11-22 17:29:22 (45914): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-22 17:29:22 (45914): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-22 17:29:22 (45914): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-22 17:29:28 (45914): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-22 17:29:28 (45914): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-22 17:29:34 (45914): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-22 17:29:34 (45914): Guest Log: 00:00:00.000129 main     Log opened 2025-11-22T23:29:32.174982000Z
2025-11-22 17:29:34 (45914): Guest Log: 00:00:00.000200 main     OS Product: Linux
2025-11-22 17:29:34 (45914): Guest Log: 00:00:00.000221 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-22 17:29:34 (45914): Guest Log: 00:00:00.000236 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-22 17:29:34 (45914): Guest Log: 00:00:00.000251 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-22 17:29:34 (45914): Guest Log: 00:00:00.000251 main     Process ID: 1300
2025-11-22 17:29:34 (45914): Guest Log: 00:00:00.000252 main     Package type: LINUX_64BITS_GENERIC
2025-11-22 17:29:34 (45914): Guest Log: 00:00:00.001678 main     5.2.32 r132073 started. Verbose level = 0
2025-11-22 17:29:34 (45914): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-22 17:29:34 (45914): Guest Log: [INFO] Mounting shared directory
2025-11-22 17:29:34 (45914): Guest Log: [INFO] Checking for init_data.xml
2025-11-22 17:30:22 (45914): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-22 17:30:22 (45914): Guest Log: [INFO] Detected branch: prod
2025-11-22 17:30:22 (45914): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-22 17:30:22 (45914): Guest Log: Copying input files
2025-11-22 17:30:24 (45914): Guest Log: Copied input files into RunAtlas.
2025-11-22 17:30:24 (45914): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-22 17:30:24 (45914): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-22 17:30:24 (45914): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-22 17:30:24 (45914): Guest Log: Further information can be found at the LHC@home message board.
2025-11-22 17:30:34 (45914): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-22 17:30:35 (45914): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-22 17:30:35 (45914): Guest Log: 2.6.3.0 1599 0 30128 153190 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-22 17:30:36 (45914): Guest Log: copied the webapp to /var/www
2025-11-22 17:30:36 (45914): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-22 17:30:36 (45914): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-22 17:30:36 (45914): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-22 17:30:36 (45914): Guest Log:  *** Starting ATLAS job. (PandaID=6895324228 taskID=47556137) ***
2025-11-22 19:08:28 (45914): Status Report: Elapsed Time: '6000.000000'
2025-11-22 19:08:28 (45914): Status Report: CPU Time: '22377.620000'
2025-11-22 20:47:40 (45914): Status Report: Elapsed Time: '12000.000000'
2025-11-22 20:47:40 (45914): Status Report: CPU Time: '46142.640000'
2025-11-22 22:26:52 (45914): Status Report: Elapsed Time: '18000.000000'
2025-11-22 22:26:52 (45914): Status Report: CPU Time: '69911.240000'
2025-11-23 00:06:04 (45914): Status Report: Elapsed Time: '24000.000000'
2025-11-23 00:06:04 (45914): Status Report: CPU Time: '93679.300000'
2025-11-23 01:45:16 (45914): Status Report: Elapsed Time: '30000.000000'
2025-11-23 01:45:16 (45914): Status Report: CPU Time: '117450.590000'
2025-11-23 02:58:03 (45914): Guest Log:  *** Job finished ***
2025-11-23 02:58:03 (45914): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:57:32,953 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:57:32,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:57:57,144 | INFO     | [monitor] cgroup control has ended
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:57:57,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700551006016)>', '<ExcThread(monitor, started 139699960137472)>']
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:57:57,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:57:57,989 | INFO     | [monitor] control thread has ended
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,664 | INFO     | all workflow threads have been joined
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,665 | INFO     | end of generic workflow (traces error code: 0)
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,665 | INFO     | traces error code: 0
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,736 [wrapper] ==== pilot stdout END ====
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,741 [wrapper] ==== wrapper stdout RESUME ====
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,746 [wrapper] pilotpid: 5988
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,750 [wrapper] Pilot exit status: 0
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,771 [wrapper] pandaids: 6895324228
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,804 [wrapper] cleanup supervisor_pilot 11233 5989
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,814 [wrapper] Test setup, not cleaning
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,820 [wrapper] apfmon messages muted
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,825 [wrapper] ==== wrapper stdout END ====
2025-11-23 02:58:03 (45914): Guest Log: 2025-11-23 08:58:02,830 [wrapper] ==== wrapper stderr END ====
2025-11-23 02:58:03 (45914): Guest Log:  *** Error codes and diagnostics ***
2025-11-23 02:58:03 (45914): Guest Log:     "exeErrorCode": 0,
2025-11-23 02:58:03 (45914): Guest Log:     "exeErrorDiag": "",
2025-11-23 02:58:03 (45914): Guest Log:     "pilotErrorCode": 0,
2025-11-23 02:58:03 (45914): Guest Log:     "pilotErrorDiag": "",
2025-11-23 02:58:03 (45914): Guest Log:  *** Listing of results directory ***
2025-11-23 02:58:03 (45914): Guest Log: total 909912
2025-11-23 02:58:03 (45914): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 13:51 pilot3.tar.gz
2025-11-23 02:58:03 (45914): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 14:16 runpilot2-wrapper.sh
2025-11-23 02:58:03 (45914): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 14:16 queuedata.json
2025-11-23 02:58:03 (45914): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 22 23:30 start_atlas.sh
2025-11-23 02:58:03 (45914): Guest Log: -rw-r--r--. 1 atlas atlas    590096 Nov 22 23:30 input.tar.gz
2025-11-23 02:58:03 (45914): Guest Log: -rw-r--r--. 1 atlas atlas      9078 Nov 22 23:30 init_data.xml
2025-11-23 02:58:03 (45914): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 22 23:30 EVNT.47483658._000020.pool.root.1 -> /data/./ATLAS.root_0
2025-11-23 02:58:03 (45914): Guest Log: -rw-r--r--. 1 atlas atlas      2784 Nov 22 23:30 pandaJob.out
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas    989784 Nov 22 23:31 agis_schedconf.cvmfs.json
2025-11-23 02:58:03 (45914): Guest Log: drwx------. 5 atlas atlas      4096 Nov 22 23:31 pilot3
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas 916432188 Nov 23 08:56 HITS.47556137._000195.pool.root.1
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas        95 Nov 23 08:56 pilot_heartbeat.json
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas      1040 Nov 23 08:56 memory_monitor_summary.json
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 23 08:56 agis_ddmendpoints.agis.ALL.json
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas   1359084 Nov 23 08:56 log.47556137._000195.job.log.tgz.1
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas      8652 Nov 23 08:57 heartbeat.json
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas      5063 Nov 23 08:58 pilotlog.txt
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas   4371658 Nov 23 08:58 log.47556137._000195.job.log.1
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas       353 Nov 23 08:58 output.list
2025-11-23 02:58:03 (45914): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 23 08:58 runtime_log
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas   5754880 Nov 23 08:58 result.tar.gz
2025-11-23 02:58:03 (45914): Guest Log: -rw-r--r--. 1 atlas atlas      8759 Nov 23 08:58 runtime_log.err
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas       665 Nov 23 08:58 nSdMDmK7gg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0eHKDmCkKUOn.diag
2025-11-23 02:58:03 (45914): Guest Log: Looking for outputfile HITS.47556137._000195.pool.root.1
2025-11-23 02:58:03 (45914): Guest Log: HITS file was successfully produced
2025-11-23 02:58:03 (45914): Guest Log: -rw-------. 1 atlas atlas 916432188 Nov 23 08:56 /home/atlas/RunAtlas/HITS.47556137._000195.pool.root.1
2025-11-23 02:58:03 (45914): Guest Log: Successfully finished the ATLAS job!
2025-11-23 02:58:03 (45914): Guest Log: Copying the results back to the shared directory!
2025-11-23 02:58:03 (45914): Guest Log:  *** Contents of shared directory: ***
2025-11-23 02:58:03 (45914): Guest Log: total 406168
2025-11-23 02:58:03 (45914): Guest Log: -rw-r--r--. 1 root root 409535134 Nov 22 23:29 ATLAS.root_0
2025-11-23 02:58:03 (45914): Guest Log: -rw-r--r--. 1 root root      9078 Nov 22 23:29 init_data.xml
2025-11-23 02:58:04 (45914): Guest Log: -rw-r--r--. 1 root root    590096 Nov 22 23:29 input.tar.gz
2025-11-23 02:58:04 (45914): Guest Log: -rw-r--r--. 1 root root   5754880 Nov 23 08:58 result.tar.gz
2025-11-23 02:58:04 (45914): Guest Log: -rw-r--r--. 1 root root     15847 Nov 22 23:29 start_atlas.sh
2025-11-23 02:58:04 (45914): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-23 02:58:04 (45914): VM Completion File Detected.
2025-11-23 02:58:04 (45914): Powering off VM.
2025-11-23 02:58:04 (45914): Successfully stopped VM.
2025-11-23 02:58:04 (45914): Deregistering VM. (boinc_d5cfe8ce06bf8a71, slot#0)
2025-11-23 02:58:04 (45914): Removing network bandwidth throttle group from VM.
2025-11-23 02:58:04 (45914): Removing VM from VirtualBox.
2025-11-23 02:58:09 (45914): called boinc_finish(0)

</stderr_txt>
]]>

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