Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:49:32 (25421): wrapper (7.7.26015): starting
12:49:32 (25421): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 12:49:32] Arguments: --nthreads 8
[2025-11-22 12:49:32] Threads: 8
[2025-11-22 12:49:32] Checking for CVMFS
[2025-11-22 12:49:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 12:49:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 12:49:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 12:49:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 12:49:33] 2.11.2.0 2827 37640 78852 153180 3 82 12089010 20275201 1 130560 0 3784109 99.375 2730116 29602 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 12:49:33] CVMFS is ok
[2025-11-22 12:49:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 12:49:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 12:49:33] Further information can be found at the LHC@home message board.
[2025-11-22 12:49:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 12:49:33] Checking for apptainer binary...
[2025-11-22 12:49:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 12:49:33] Running /usr/bin/apptainer --version
[2025-11-22 12:49:33] apptainer version 1.3.2-1.el7
[2025-11-22 12:49:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 12:49:35] c-204-30.aglt2.org
[2025-11-22 12:49:35] apptainer works
[2025-11-22 12:49:35] Set ATHENA_PROC_NUMBER=8
[2025-11-22 12:49:35] Set ATHENA_CORE_NUMBER=8
[2025-11-22 12:49:35] Starting ATLAS job with PandaID=6895324243
[2025-11-22 12:49:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 01:18:18]  *** The last 200 lines of the pilot log: ***
[2025-11-23 01:18:18] 2025-11-23 06:17:16,053 | INFO     | time since job start (44838s) is within the limit (172800.0s)
[2025-11-23 01:18:18] 2025-11-23 06:17:16,432 | INFO     | monitor loop #3277: job 0:6895324243 is in state 'finished'
[2025-11-23 01:18:18] 2025-11-23 06:17:16,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:18:18] 2025-11-23 06:17:17,073 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-23 01:18:18] 2025-11-23 06:17:17,077 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-23 01:18:18] 2025-11-23 06:17:17,079 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895324243/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 01:18:18] 2025-11-23 06:17:17,080 | INFO     | extracted standard info from prmon json
[2025-11-23 01:18:18] 2025-11-23 06:17:17,081 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 01:18:18] 2025-11-23 06:17:17,081 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 01:18:18] 2025-11-23 06:17:17,096 | INFO     | fitting pss+swap vs Time
[2025-11-23 01:18:18] 2025-11-23 06:17:17,098 | INFO     | sum of square deviations: 123123617246.03523
[2025-11-23 01:18:18] 2025-11-23 06:17:17,111 | INFO     | sum of deviations: 825182835891.6322
[2025-11-23 01:18:18] 2025-11-23 06:17:17,111 | INFO     | mean x: 1763856223.614966
[2025-11-23 01:18:18] 2025-11-23 06:17:17,112 | INFO     | mean y: 3227044.05170068
[2025-11-23 01:18:18] 2025-11-23 06:17:17,112 | INFO     | intersect: -11818257032.38833
[2025-11-23 01:18:18] 2025-11-23 06:17:17,113 | INFO     | chi2: 6.886608567081935
[2025-11-23 01:18:18] 2025-11-23 06:17:17,114 | INFO     | sum of square deviations: 120628089706.63142
[2025-11-23 01:18:18] 2025-11-23 06:17:17,127 | INFO     | sum of deviations: 1132216341328.8088
[2025-11-23 01:18:18] 2025-11-23 06:17:17,127 | INFO     | mean x: 1763856071.119178
[2025-11-23 01:18:18] 2025-11-23 06:17:17,127 | INFO     | mean y: 3245809.01369863
[2025-11-23 01:18:18] 2025-11-23 06:17:17,127 | INFO     | intersect: -16552323232.409794
[2025-11-23 01:18:18] 2025-11-23 06:17:17,128 | INFO     | chi2: 3.0955743611086324
[2025-11-23 01:18:18] 2025-11-23 06:17:17,128 | INFO     | current chi2=3.0955743611086324 (change=55.04936383482703 %)
[2025-11-23 01:18:18] 2025-11-23 06:17:17,129 | INFO     | sum of square deviations: 118166516292.20143
[2025-11-23 01:18:18] 2025-11-23 06:17:17,144 | INFO     | sum of deviations: 1221567920394.5098
[2025-11-23 01:18:18] 2025-11-23 06:17:17,145 | INFO     | mean x: 1763855918.6234484
[2025-11-23 01:18:18] 2025-11-23 06:17:17,145 | INFO     | mean y: 3251335.899310345
[2025-11-23 01:18:18] 2025-11-23 06:17:17,145 | INFO     | intersect: -18230931019.619568
[2025-11-23 01:18:18] 2025-11-23 06:17:17,146 | INFO     | chi2: 2.614669360779447
[2025-11-23 01:18:18] 2025-11-23 06:17:17,146 | INFO     | current chi2=2.614669360779447 (change=15.5352430350585 %)
[2025-11-23 01:18:18] 2025-11-23 06:17:17,146 | INFO     | right removable region: 724
[2025-11-23 01:18:18] 2025-11-23 06:17:17,147 | INFO     | sum of square deviations: 120627813986.63148
[2025-11-23 01:18:18] 2025-11-23 06:17:17,160 | INFO     | sum of deviations: 591792478862.3822
[2025-11-23 01:18:18] 2025-11-23 06:17:17,160 | INFO     | mean x: 1763856376.119178
[2025-11-23 01:18:18] 2025-11-23 06:17:17,160 | INFO     | mean y: 3241281.2369863014
[2025-11-23 01:18:18] 2025-11-23 06:17:17,161 | INFO     | intersect: -8650127313.310118
[2025-11-23 01:18:18] 2025-11-23 06:17:17,161 | INFO     | chi2: 4.471776851416454
[2025-11-23 01:18:18] 2025-11-23 06:17:17,162 | INFO     | current chi2=4.471776851416454 (change=35.06561600158899 %)
[2025-11-23 01:18:18] 2025-11-23 06:17:17,163 | INFO     | sum of square deviations: 118166098686.93051
[2025-11-23 01:18:18] 2025-11-23 06:17:17,175 | INFO     | sum of deviations: 542429320897.93616
[2025-11-23 01:18:18] 2025-11-23 06:17:17,175 | INFO     | mean x: 1763856528.6193104
[2025-11-23 01:18:18] 2025-11-23 06:17:17,175 | INFO     | mean y: 3244337.833103448
[2025-11-23 01:18:18] 2025-11-23 06:17:17,176 | INFO     | intersect: -8093557618.159582
[2025-11-23 01:18:18] 2025-11-23 06:17:17,176 | INFO     | chi2: 4.424055777097136
[2025-11-23 01:18:18] 2025-11-23 06:17:17,177 | INFO     | current chi2=4.424055777097136 (change=1.0671613522978474 %)
[2025-11-23 01:18:18] 2025-11-23 06:17:17,177 | INFO     | left removable region: 20
[2025-11-23 01:18:18] 2025-11-23 06:17:17,178 | INFO     | sum of square deviations: 108192729769.23732
[2025-11-23 01:18:18] 2025-11-23 06:17:17,190 | INFO     | sum of deviations: 888503506185.9807
[2025-11-23 01:18:18] 2025-11-23 06:17:17,190 | INFO     | mean x: 1763856498.1292613
[2025-11-23 01:18:18] 2025-11-23 06:17:17,190 | INFO     | mean y: 3272668.9232954546
[2025-11-23 01:18:18] 2025-11-23 06:17:17,191 | INFO     | intersect: -14481921357.878841
[2025-11-23 01:18:18] 2025-11-23 06:17:17,191 | INFO     | chi2: 0.10301042202918642
[2025-11-23 01:18:18] 2025-11-23 06:17:17,192 | INFO     | current memory leak: 8.21 B/s (using 704 data points, chi2=0.10)
[2025-11-23 01:18:18] 2025-11-23 06:17:17,192 | INFO     | could have reported an average CPU frequency of 2184 MHz (28 samples)
[2025-11-23 01:18:18] 2025-11-23 06:17:17,192 | INFO     | ..............................
[2025-11-23 01:18:18] 2025-11-23 06:17:17,193 | INFO     | . Timing measurements:
[2025-11-23 01:18:18] 2025-11-23 06:17:17,193 | INFO     | . get job = 0 s
[2025-11-23 01:18:18] 2025-11-23 06:17:17,193 | INFO     | . initial setup = 3 s
[2025-11-23 01:18:18] 2025-11-23 06:17:17,193 | INFO     | . payload setup = 11 s
[2025-11-23 01:18:18] 2025-11-23 06:17:17,193 | INFO     | . stage-in = 0 s
[2025-11-23 01:18:18] 2025-11-23 06:17:17,193 | INFO     | . payload execution = 44794 s
[2025-11-23 01:18:18] 2025-11-23 06:17:17,193 | INFO     | . stage-out = 3 s
[2025-11-23 01:18:18] 2025-11-23 06:17:17,194 | INFO     | . log creation = 0 s
[2025-11-23 01:18:18] 2025-11-23 06:17:17,194 | INFO     | ..............................
[2025-11-23 01:18:18] 2025-11-23 06:17:17,300 | INFO     | 
[2025-11-23 01:18:18] 2025-11-23 06:17:17,303 | INFO     | job summary report
[2025-11-23 01:18:18] 2025-11-23 06:17:17,303 | INFO     | --------------------------------------------------
[2025-11-23 01:18:18] 2025-11-23 06:17:17,303 | INFO     | PanDA job id: 6895324243
[2025-11-23 01:18:18] 2025-11-23 06:17:17,303 | INFO     | task id: 47556149
[2025-11-23 01:18:18] 2025-11-23 06:17:17,304 | INFO     | errors: (none)
[2025-11-23 01:18:18] 2025-11-23 06:17:17,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 01:18:18] 2025-11-23 06:17:17,304 | INFO     | pilot state: finished 
[2025-11-23 01:18:18] 2025-11-23 06:17:17,304 | INFO     | transexitcode: 0
[2025-11-23 01:18:18] 2025-11-23 06:17:17,304 | INFO     | exeerrorcode: 0
[2025-11-23 01:18:18] 2025-11-23 06:17:17,304 | INFO     | exeerrordiag: 
[2025-11-23 01:18:18] 2025-11-23 06:17:17,305 | INFO     | exitcode: 0
[2025-11-23 01:18:18] 2025-11-23 06:17:17,305 | INFO     | exitmsg: OK
[2025-11-23 01:18:18] 2025-11-23 06:17:17,305 | INFO     | cpuconsumptiontime: 347838 s
[2025-11-23 01:18:18] 2025-11-23 06:17:17,305 | INFO     | nevents: 1000
[2025-11-23 01:18:18] 2025-11-23 06:17:17,305 | INFO     | neventsw: 0
[2025-11-23 01:18:18] 2025-11-23 06:17:17,305 | INFO     | pid: 4502
[2025-11-23 01:18:18] 2025-11-23 06:17:17,305 | INFO     | pgrp: 4502
[2025-11-23 01:18:18] 2025-11-23 06:17:17,305 | INFO     | corecount: 8
[2025-11-23 01:18:18] 2025-11-23 06:17:17,306 | INFO     | event service: False
[2025-11-23 01:18:18] 2025-11-23 06:17:17,306 | INFO     | sizes: {0: 2298802, 8: 2299064, 11: 2299092, 44808: 2344875, 44813: 2353953, 44819: 2354143}
[2025-11-23 01:18:18] 2025-11-23 06:17:17,306 | INFO     | --------------------------------------------------
[2025-11-23 01:18:18] 2025-11-23 06:17:17,306 | INFO     | 
[2025-11-23 01:18:18] 2025-11-23 06:17:17,306 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-23 01:18:18] 2025-11-23 06:17:17,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,335 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,335 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 01:18:18] 2025-11-23 06:17:17,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 01:18:18] 2025-11-23 06:17:17,339 | INFO     | job 6895324243 has completed (purged errors)
[2025-11-23 01:18:18] 2025-11-23 06:17:17,339 | INFO     | overall cleanup function is called
[2025-11-23 01:18:18] 2025-11-23 06:17:18,352 | INFO     | --- collectZombieJob: --- 10, [4502]
[2025-11-23 01:18:18] 2025-11-23 06:17:18,353 | INFO     | zombie collector waiting for pid 4502
[2025-11-23 01:18:18] 2025-11-23 06:17:18,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 01:18:18] 2025-11-23 06:17:18,353 | INFO     | collected zombie processes
[2025-11-23 01:18:18] 2025-11-23 06:17:18,353 | INFO     | will attempt to kill all subprocesses of pid=4502
[2025-11-23 01:18:18] 2025-11-23 06:17:18,450 | INFO     | process IDs to be killed: [4502] (in reverse order)
[2025-11-23 01:18:18] 2025-11-23 06:17:18,513 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 01:18:18] 2025-11-23 06:17:18,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 01:18:18] 2025-11-23 06:17:18,517 | INFO     | did not find any defunct processes belonging to 4502
[2025-11-23 01:18:18] 2025-11-23 06:17:18,521 | INFO     | did not find any defunct processes belonging to 4502
[2025-11-23 01:18:18] 2025-11-23 06:17:18,524 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 01:18:18] 2025-11-23 06:17:18,524 | INFO     | ready for new job
[2025-11-23 01:18:18] 2025-11-23 06:17:18,525 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 01:18:18] 2025-11-23 06:17:18,529 | INFO     | ***************************************
[2025-11-23 01:18:18] 2025-11-23 06:17:18,529 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 01:18:18] 2025-11-23 06:17:18,529 | INFO     | ***************************************
[2025-11-23 01:18:18] 2025-11-23 06:17:18,529 | INFO     | 
[2025-11-23 01:18:18] 2025-11-23 06:17:18,530 | INFO     | architecture information:
[2025-11-23 01:18:18] 2025-11-23 06:17:18,531 | INFO     | executing command: cat /etc/os-release
[2025-11-23 01:18:18] 2025-11-23 06:17:18,548 | INFO     | cat /etc/os-release:
[2025-11-23 01:18:18] NAME="CentOS Linux"
[2025-11-23 01:18:18] VERSION="7 (Core)"
[2025-11-23 01:18:18] ID="centos"
[2025-11-23 01:18:18] ID_LIKE="rhel fedora"
[2025-11-23 01:18:18] VERSION_ID="7"
[2025-11-23 01:18:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 01:18:18] ANSI_COLOR="0;31"
[2025-11-23 01:18:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 01:18:18] HOME_URL="https://www.centos.org/"
[2025-11-23 01:18:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 01:18:18] 
[2025-11-23 01:18:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 01:18:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 01:18:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 01:18:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 01:18:18] 
[2025-11-23 01:18:18] 2025-11-23 06:17:18,549 | INFO     | ***************************************
[2025-11-23 01:18:18] 2025-11-23 06:17:19,052 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-23 01:18:18] 2025-11-23 06:17:19,074 | INFO     | sufficient remaining disk space (17436770304 B)
[2025-11-23 01:18:18] 2025-11-23 06:17:19,074 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 01:18:18] 2025-11-23 06:17:19,075 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 01:18:18] 2025-11-23 06:17:19,075 | INFO     | update_server=False
[2025-11-23 01:18:18] 2025-11-23 06:17:19,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 01:18:18] 2025-11-23 06:17:19,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 01:18:18] 2025-11-23 06:17:19,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:18:18] 2025-11-23 06:17:19,853 | INFO     | all data control threads have been joined
[2025-11-23 01:18:18] 2025-11-23 06:17:19,935 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:18:18] 2025-11-23 06:17:19,936 | INFO     | aborting loop
[2025-11-23 01:18:18] 2025-11-23 06:17:20,077 | INFO     | [job] queue monitor thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:20,081 | INFO     | [job] retrieve thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:20,220 | INFO     | [data] copytool_in thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:20,369 | INFO     | all payload control threads have been joined
[2025-11-23 01:18:18] 2025-11-23 06:17:20,539 | INFO     | [payload] failed_post thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:20,615 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:20,679 | INFO     | all job control threads have been joined
[2025-11-23 01:18:18] 2025-11-23 06:17:20,859 | INFO     | [data] control thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:20,937 | INFO     | [job] job monitor thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:21,071 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:21,077 | INFO     | [data] copytool_out thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:21,086 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:21,284 | INFO     | [job] validate thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:21,371 | INFO     | [payload] control thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:21,636 | INFO     | [payload] validate_post thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:21,684 | INFO     | [job] control thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:21,841 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 01:18:18] 2025-11-23 06:17:25,847 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:29,200 | INFO     | job.realtimelogging is not enabled
[2025-11-23 01:18:18] 2025-11-23 06:17:30,205 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 01:18:18] 2025-11-23 06:17:49,325 | INFO     | PID=29119 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 01:18:18] 2025-11-23 06:17:49,327 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 01:18:18] 2025-11-23 06:17:49,327 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 01:18:18] 2025-11-23 06:17:49,327 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 01:18:18] 2025-11-23 06:18:12,570 | INFO     | [monitor] cgroup control has ended
[2025-11-23 01:18:18] 2025-11-23 06:18:12,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140700433602368)>', '<ExcThread(monitor, started 140699085297408)>']
[2025-11-23 01:18:18] 2025-11-23 06:18:13,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 01:18:18] 2025-11-23 06:18:13,438 | INFO     | [monitor] control thread has ended
[2025-11-23 01:18:18] 2025-11-23 06:18:17,780 | INFO     | all workflow threads have been joined
[2025-11-23 01:18:18] 2025-11-23 06:18:17,781 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 01:18:18] 2025-11-23 06:18:17,781 | INFO     | traces error code: 0
[2025-11-23 01:18:18] 2025-11-23 06:18:17,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 01:18:18] 2025-11-23 06:18:17,926 [wrapper] ==== pilot stdout END ====
[2025-11-23 01:18:18] 2025-11-23 06:18:17,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 01:18:18] 2025-11-23 06:18:17,936 [wrapper] pilotpid: 29119
[2025-11-23 01:18:18] 2025-11-23 06:18:17,940 [wrapper] Pilot exit status: 0
[2025-11-23 01:18:18] 2025-11-23 06:18:17,956 [wrapper] pandaids: 6895324243
[2025-11-23 01:18:18] 2025-11-23 06:18:18,014 [wrapper] cleanup supervisor_pilot  2320 29120
[2025-11-23 01:18:18] 2025-11-23 06:18:18,019 [wrapper] Test setup, not cleaning
[2025-11-23 01:18:18] 2025-11-23 06:18:18,024 [wrapper] apfmon messages muted
[2025-11-23 01:18:18] 2025-11-23 06:18:18,028 [wrapper] ==== wrapper stdout END ====
[2025-11-23 01:18:18] 2025-11-23 06:18:18,032 [wrapper] ==== wrapper stderr END ====
[2025-11-23 01:18:18]  *** Error codes and diagnostics ***
[2025-11-23 01:18:18]     "exeErrorCode": 0,
[2025-11-23 01:18:18]     "exeErrorDiag": "",
[2025-11-23 01:18:18]     "pilotErrorCode": 0,
[2025-11-23 01:18:18]     "pilotErrorDiag": "",
[2025-11-23 01:18:18]  *** Listing of results directory ***
[2025-11-23 01:18:18] total 1313400
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 08:51 pilot3.tar.gz
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 09:15 queuedata.json
[2025-11-23 01:18:18] -rwx------ 1 boincer umatlas     36292 Nov 21 09:16 runpilot2-wrapper.sh
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas       100 Nov 22 12:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 01:18:18] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 12:49 run_atlas
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas       105 Nov 22 12:49 job.xml
[2025-11-23 01:18:18] -rw-r--r-- 2 boincer umatlas 411234284 Nov 22 12:49 EVNT.47483658._001017.pool.root.1
[2025-11-23 01:18:18] -rw-r--r-- 2 boincer umatlas    590102 Nov 22 12:49 input.tar.gz
[2025-11-23 01:18:18] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 12:49 start_atlas.sh
[2025-11-23 01:18:18] drwxrwx--x 2 boincer umatlas      4096 Nov 22 12:49 shared
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas         0 Nov 22 12:49 boinc_lockfile
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas      2783 Nov 22 12:49 pandaJob.out
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas        57 Nov 22 12:49 setup.sh.local
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas    989776 Nov 22 12:49 agis_schedconf.cvmfs.json
[2025-11-23 01:18:18] drwx------ 5 boincer umatlas      4096 Nov 22 12:49 pilot3
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas       532 Nov 23 01:06 boinc_task_state.xml
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas      5912 Nov 23 01:13 init_data.xml
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas 913577009 Nov 23 01:16 HITS.47556149._000034.pool.root.1
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas      1064 Nov 23 01:17 memory_monitor_summary.json
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas   1526164 Nov 23 01:17 agis_ddmendpoints.agis.ALL.json
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas   1974546 Nov 23 01:17 log.47556149._000034.job.log.tgz.1
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas      8672 Nov 23 01:17 heartbeat.json
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas        95 Nov 23 01:17 pilot_heartbeat.json
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas      8192 Nov 23 01:18 boinc_mmap_file
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas        29 Nov 23 01:18 wrapper_checkpoint.txt
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas      4818 Nov 23 01:18 pilotlog.txt
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas   6120266 Nov 23 01:18 log.47556149._000034.job.log.1
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas       353 Nov 23 01:18 output.list
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas       620 Nov 23 01:18 runtime_log
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas   8110080 Nov 23 01:18 result.tar.gz
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas      9343 Nov 23 01:18 runtime_log.err
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas       668 Nov 23 01:18 Q8XMDmv6gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLTJKDmSr6YZn.diag
[2025-11-23 01:18:18] -rw-r--r-- 1 boincer umatlas     21248 Nov 23 01:18 stderr.txt
[2025-11-23 01:18:18] HITS file was successfully produced:
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas 913577009 Nov 23 01:16 shared/HITS.pool.root.1
[2025-11-23 01:18:18]  *** Contents of shared directory: ***
[2025-11-23 01:18:18] total 1302284
[2025-11-23 01:18:18] -rw-r--r-- 2 boincer umatlas 411234284 Nov 22 12:49 ATLAS.root_0
[2025-11-23 01:18:18] -rw-r--r-- 2 boincer umatlas    590102 Nov 22 12:49 input.tar.gz
[2025-11-23 01:18:18] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 12:49 start_atlas.sh
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas 913577009 Nov 23 01:16 HITS.pool.root.1
[2025-11-23 01:18:18] -rw------- 1 boincer umatlas   8110080 Nov 23 01:18 result.tar.gz
01:18:19 (25421): run_atlas exited; CPU time 345428.707868
01:18:19 (25421): called boinc_finish(0)

</stderr_txt>
]]>

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