Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:57:16 (2486159): wrapper (7.7.26015): starting
05:57:16 (2486159): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 05:57:16] Arguments: --nthreads 4
[2025-11-25 05:57:16] Threads: 4
[2025-11-25 05:57:16] Checking for CVMFS
[2025-11-25 05:57:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:57:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:57:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:57:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:57:16] 2.9.2.0 1145218 9280 87544 153270 0 81 31143982 36864001 0 130560 0 3743046 99.929 487203 7497 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 05:57:16] CVMFS is ok
[2025-11-25 05:57:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 05:57:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 05:57:16] Further information can be found at the LHC@home message board.
[2025-11-25 05:57:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:57:16] Checking for apptainer binary...
[2025-11-25 05:57:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:57:16] Running /usr/bin/apptainer --version
[2025-11-25 05:57:16] apptainer version 1.4.1-1.1
[2025-11-25 05:57:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:57:16] thA315a
[2025-11-25 05:57:16] apptainer works
[2025-11-25 05:57:16] Set ATHENA_PROC_NUMBER=4
[2025-11-25 05:57:16] Set ATHENA_CORE_NUMBER=4
[2025-11-25 05:57:16] Starting ATLAS job with PandaID=6895323795
[2025-11-25 05:57:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:43:00]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:43:00] VERSION_ID="7"
[2025-11-25 12:43:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:43:00] ANSI_COLOR="0;31"
[2025-11-25 12:43:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:43:00] HOME_URL="https://www.centos.org/"
[2025-11-25 12:43:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:43:00] 
[2025-11-25 12:43:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:43:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:43:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:43:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:43:00] 
[2025-11-25 12:43:00] 2025-11-25 11:42:00,880 | INFO     | ***************************************
[2025-11-25 12:43:00] 2025-11-25 11:42:01,383 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 12:43:00] 2025-11-25 11:42:01,401 | INFO     | sufficient remaining disk space (224815742976 B)
[2025-11-25 12:43:00] 2025-11-25 11:42:01,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:43:00] 2025-11-25 11:42:01,401 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:43:00] 2025-11-25 11:42:01,401 | INFO     | update_server=False
[2025-11-25 12:43:00] 2025-11-25 11:42:01,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:43:00] 2025-11-25 11:42:01,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:43:00] 2025-11-25 11:42:01,799 | INFO     | all payload control threads have been joined
[2025-11-25 12:43:00] 2025-11-25 11:42:02,094 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:43:00] 2025-11-25 11:42:02,094 | INFO     | aborting loop
[2025-11-25 12:43:00] 2025-11-25 11:42:02,407 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:02,442 | INFO     | all data control threads have been joined
[2025-11-25 12:43:00] 2025-11-25 11:42:02,471 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:02,485 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:02,630 | INFO     | [job] validate thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:02,723 | INFO     | all job control threads have been joined
[2025-11-25 12:43:00] 2025-11-25 11:42:02,805 | INFO     | [payload] control thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:02,935 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:03,100 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:03,111 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:03,234 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:03,448 | INFO     | [data] control thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:03,481 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:03,729 | INFO     | [job] control thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:03,868 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:03,887 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:04,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:43:00] 2025-11-25 11:42:04,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:43:00] 2025-11-25 11:42:05,356 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:08,018 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:43:00] 2025-11-25 11:42:23,177 [wrapper] supervise_pilot (15 min periods counter: 28)
[2025-11-25 12:43:00] 2025-11-25 11:42:31,263 | INFO     | PID=2489951 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 12:43:00] 2025-11-25 11:42:31,263 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:43:00] 2025-11-25 11:42:31,263 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:43:00] 2025-11-25 11:42:31,263 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:43:00] 2025-11-25 11:42:53,935 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:43:00] 2025-11-25 11:42:54,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493746128704)>', '<ExcThread(monitor, started 140492725540608)>']
[2025-11-25 12:43:00] 2025-11-25 11:42:55,391 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:43:00] 2025-11-25 11:42:55,392 | INFO     | [monitor] control thread has ended
[2025-11-25 12:43:00] 2025-11-25 11:42:59,967 | INFO     | all workflow threads have been joined
[2025-11-25 12:43:00] 2025-11-25 11:42:59,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:43:00] 2025-11-25 11:42:59,967 | INFO     | traces error code: 0
[2025-11-25 12:43:00] 2025-11-25 11:42:59,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:43:00] 2025-11-25 11:43:00,039 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:43:00] 2025-11-25 11:43:00,042 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:43:00] 2025-11-25 11:43:00,046 [wrapper] pilotpid: 2489951
[2025-11-25 12:43:00] 2025-11-25 11:43:00,050 [wrapper] Pilot exit status: 0
[2025-11-25 12:43:00] 2025-11-25 11:43:00,060 [wrapper] pandaids: 6895323795
[2025-11-25 12:43:00] 2025-11-25 11:43:00,083 [wrapper] cleanup supervisor_pilot 2543714 2489952
[2025-11-25 12:43:00] 2025-11-25 11:43:00,086 [wrapper] Test setup, not cleaning
[2025-11-25 12:43:00] 2025-11-25 11:43:00,090 [wrapper] apfmon messages muted
[2025-11-25 12:43:00] 2025-11-25 11:43:00,094 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:43:00] 2025-11-25 11:43:00,097 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:43:00]  *** Error codes and diagnostics ***
[2025-11-25 12:43:00]     "exeErrorCode": 0,
[2025-11-25 12:43:00]     "exeErrorDiag": "",
[2025-11-25 12:43:00]     "pilotErrorCode": 0,
[2025-11-25 12:43:00]     "pilotErrorDiag": "",
[2025-11-25 12:43:00]  *** Listing of results directory ***
[2025-11-25 12:43:00] total 1319120
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc    576529 Nov 21 14:51 pilot3.tar.gz
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc      5112 Nov 21 15:02 queuedata.json
[2025-11-25 12:43:00] -rwx------ 1 boinc boinc     36292 Nov 21 15:03 runpilot2-wrapper.sh
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc       100 Nov 25 05:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:43:00] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 05:57 run_atlas
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc       105 Nov 25 05:57 job.xml
[2025-11-25 12:43:00] -rw-r--r-- 2 boinc boinc 411998054 Nov 25 05:57 EVNT.47483658._000011.pool.root.1
[2025-11-25 12:43:00] drwxrwx--x 2 boinc boinc      4096 Nov 25 05:57 shared
[2025-11-25 12:43:00] -rw-r--r-- 2 boinc boinc    590098 Nov 25 05:57 input.tar.gz
[2025-11-25 12:43:00] -rw-r--r-- 2 boinc boinc     15847 Nov 25 05:57 start_atlas.sh
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc         0 Nov 25 05:57 boinc_setup_complete
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc      6372 Nov 25 05:57 init_data.xml
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc         0 Nov 25 05:57 boinc_lockfile
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc      2783 Nov 25 05:57 pandaJob.out
[2025-11-25 12:43:00] -rw------- 1 boinc boinc    991801 Nov 25 05:57 agis_schedconf.cvmfs.json
[2025-11-25 12:43:00] drwx------ 5 boinc boinc      4096 Nov 25 05:57 pilot3
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc       532 Nov 25 12:37 boinc_task_state.xml
[2025-11-25 12:43:00] -rw------- 1 boinc boinc 925506518 Nov 25 12:41 HITS.47556137._000104.pool.root.1
[2025-11-25 12:43:00] -rw------- 1 boinc boinc        95 Nov 25 12:41 pilot_heartbeat.json
[2025-11-25 12:43:00] -rw------- 1 boinc boinc      1029 Nov 25 12:41 memory_monitor_summary.json
[2025-11-25 12:43:00] -rw------- 1 boinc boinc   1516240 Nov 25 12:41 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:43:00] -rw------- 1 boinc boinc   1258601 Nov 25 12:41 log.47556137._000104.job.log.tgz.1
[2025-11-25 12:43:00] -rw------- 1 boinc boinc      8567 Nov 25 12:41 heartbeat.json
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc        28 Nov 25 12:42 wrapper_checkpoint.txt
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc      8192 Nov 25 12:42 boinc_mmap_file
[2025-11-25 12:43:00] -rw------- 1 boinc boinc      4752 Nov 25 12:42 pilotlog.txt
[2025-11-25 12:43:00] -rw------- 1 boinc boinc   3426562 Nov 25 12:43 log.47556137._000104.job.log.1
[2025-11-25 12:43:00] -rw------- 1 boinc boinc       353 Nov 25 12:43 output.list
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc       620 Nov 25 12:43 runtime_log
[2025-11-25 12:43:00] -rw------- 1 boinc boinc   4700160 Nov 25 12:43 result.tar.gz
[2025-11-25 12:43:00] -rw------- 1 boinc boinc       666 Nov 25 12:43 xoALDmCugg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgSJKDmTdtpim.diag
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc      8903 Nov 25 12:43 runtime_log.err
[2025-11-25 12:43:00] -rw-r--r-- 1 boinc boinc      8648 Nov 25 12:43 stderr.txt
[2025-11-25 12:43:00] HITS file was successfully produced:
[2025-11-25 12:43:00] -rw------- 1 boinc boinc 925506518 Nov 25 12:41 shared/HITS.pool.root.1
[2025-11-25 12:43:00]  *** Contents of shared directory: ***
[2025-11-25 12:43:00] total 1311356
[2025-11-25 12:43:00] -rw-r--r-- 2 boinc boinc 411998054 Nov 25 05:57 ATLAS.root_0
[2025-11-25 12:43:00] -rw-r--r-- 2 boinc boinc    590098 Nov 25 05:57 input.tar.gz
[2025-11-25 12:43:00] -rw-r--r-- 2 boinc boinc     15847 Nov 25 05:57 start_atlas.sh
[2025-11-25 12:43:00] -rw------- 1 boinc boinc 925506518 Nov 25 12:41 HITS.pool.root.1
[2025-11-25 12:43:00] -rw------- 1 boinc boinc   4700160 Nov 25 12:43 result.tar.gz
12:43:02 (2486159): run_atlas exited; CPU time 94975.863797
12:43:02 (2486159): called boinc_finish(0)

</stderr_txt>
]]>

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