Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:18:21 (3596876): wrapper (7.7.26015): starting
05:18:21 (3596876): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 05:18:21] Arguments: --nthreads 8
[2025-11-22 05:18:21] Threads: 8
[2025-11-22 05:18:21] Checking for CVMFS
[2025-11-22 05:18:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 05:18:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 05:18:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 05:18:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 05:18:24] 2.13.3.0 7100 24097 175304 153168 3 202 32948111 40960000 39848 16776704 0 338636853 99.734 202171579 47762 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-22 05:18:24] CVMFS is ok
[2025-11-22 05:18:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 05:18:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 05:18:24] Further information can be found at the LHC@home message board.
[2025-11-22 05:18:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 05:18:24] Checking for apptainer binary...
[2025-11-22 05:18:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 05:18:24] Running /usr/bin/apptainer --version
[2025-11-22 05:18:24] apptainer version 1.4.4-1.el9
[2025-11-22 05:18:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 05:18:24] c8-6-10.aglt2.org
[2025-11-22 05:18:24] apptainer works
[2025-11-22 05:18:24] Set ATHENA_PROC_NUMBER=8
[2025-11-22 05:18:24] Set ATHENA_CORE_NUMBER=8
[2025-11-22 05:18:25] Starting ATLAS job with PandaID=6894267630
[2025-11-22 05:18:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 16:42:19]  *** The last 200 lines of the pilot log: ***
[2025-11-22 16:42:19] 2025-11-22 21:41:05,715 | INFO     | time since job start (40868s) is within the limit (172800.0s)
[2025-11-22 16:42:19] 2025-11-22 21:41:07,245 | INFO     | monitor loop #2199: job 0:6894267630 is in state 'finished'
[2025-11-22 16:42:19] 2025-11-22 21:41:07,245 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 16:42:19] 2025-11-22 21:41:07,721 | INFO     | time since job start (40870s) is within the limit (172800.0s)
[2025-11-22 16:42:19] 2025-11-22 21:41:09,728 | INFO     | time since job start (40872s) is within the limit (172800.0s)
[2025-11-22 16:42:19] 2025-11-22 21:41:09,749 | INFO     | monitor loop #2200: job 0:6894267630 is in state 'finished'
[2025-11-22 16:42:19] 2025-11-22 21:41:09,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 16:42:19] 2025-11-22 21:41:11,734 | INFO     | time since job start (40874s) is within the limit (172800.0s)
[2025-11-22 16:42:19] 2025-11-22 21:41:12,268 | INFO     | monitor loop #2201: job 0:6894267630 is in state 'finished'
[2025-11-22 16:42:19] 2025-11-22 21:41:12,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 16:42:19] 2025-11-22 21:41:13,740 | INFO     | time since job start (40876s) is within the limit (172800.0s)
[2025-11-22 16:42:19] 2025-11-22 21:41:14,776 | INFO     | monitor loop #2202: job 0:6894267630 is in state 'finished'
[2025-11-22 16:42:19] 2025-11-22 21:41:14,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 16:42:19] 2025-11-22 21:41:15,746 | INFO     | time since job start (40878s) is within the limit (172800.0s)
[2025-11-22 16:42:19] 2025-11-22 21:41:17,280 | INFO     | monitor loop #2203: job 0:6894267630 is in state 'finished'
[2025-11-22 16:42:19] 2025-11-22 21:41:17,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 16:42:19] 2025-11-22 21:41:17,752 | INFO     | time since job start (40880s) is within the limit (172800.0s)
[2025-11-22 16:42:19] 2025-11-22 21:41:18,687 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 16:42:19] 2025-11-22 21:41:18,707 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3796.022734374999
[2025-11-22 16:42:19] 2025-11-22 21:41:18,724 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894267630/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 16:42:19] 2025-11-22 21:41:18,724 | INFO     | extracted standard info from prmon json
[2025-11-22 16:42:19] 2025-11-22 21:41:18,725 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 16:42:19] 2025-11-22 21:41:18,725 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 16:42:19] 2025-11-22 21:41:18,750 | INFO     | fitting pss+swap vs Time
[2025-11-22 16:42:19] 2025-11-22 21:41:18,751 | INFO     | sum of square deviations: 92026978672.98647
[2025-11-22 16:42:19] 2025-11-22 21:41:18,786 | INFO     | sum of deviations: 872517693742.1101
[2025-11-22 16:42:19] 2025-11-22 21:41:18,786 | INFO     | mean x: 1763827300.0044978
[2025-11-22 16:42:19] 2025-11-22 21:41:18,786 | INFO     | mean y: 2855218.6296851574
[2025-11-22 16:42:19] 2025-11-22 21:41:18,786 | INFO     | intersect: -16720181331.640606
[2025-11-22 16:42:19] 2025-11-22 21:41:18,787 | INFO     | chi2: 21.652519902863776
[2025-11-22 16:42:19] 2025-11-22 21:41:18,787 | INFO     | sum of square deviations: 89973571185.24472
[2025-11-22 16:42:19] 2025-11-22 21:41:18,796 | INFO     | sum of deviations: 1092874014736.2145
[2025-11-22 16:42:19] 2025-11-22 21:41:18,796 | INFO     | mean x: 1763827147.5196373
[2025-11-22 16:42:19] 2025-11-22 21:41:18,797 | INFO     | mean y: 2871587.2145015104
[2025-11-22 16:42:19] 2025-11-22 21:41:18,797 | INFO     | intersect: -21421651532.37727
[2025-11-22 16:42:19] 2025-11-22 21:41:18,797 | INFO     | chi2: 18.30323927846606
[2025-11-22 16:42:19] 2025-11-22 21:41:18,797 | INFO     | current chi2=18.30323927846606 (change=15.468317957554397 %)
[2025-11-22 16:42:19] 2025-11-22 21:41:18,797 | INFO     | right removable region: 661
[2025-11-22 16:42:19] 2025-11-22 21:41:18,797 | INFO     | sum of square deviations: 89972755615.2449
[2025-11-22 16:42:19] 2025-11-22 21:41:18,807 | INFO     | sum of deviations: 597822595007.6329
[2025-11-22 16:42:19] 2025-11-22 21:41:18,807 | INFO     | mean x: 1763827452.5196373
[2025-11-22 16:42:19] 2025-11-22 21:41:18,807 | INFO     | mean y: 2875609.6435045316
[2025-11-22 16:42:19] 2025-11-22 21:41:18,807 | INFO     | intersect: -11716848851.39463
[2025-11-22 16:42:19] 2025-11-22 21:41:18,808 | INFO     | chi2: 17.15108266801184
[2025-11-22 16:42:19] 2025-11-22 21:41:18,808 | INFO     | current chi2=17.15108266801184 (change=20.789438157988137 %)
[2025-11-22 16:42:19] 2025-11-22 21:41:18,808 | INFO     | left removable region: 10
[2025-11-22 16:42:19] 2025-11-22 21:41:18,808 | INFO     | sum of square deviations: 85562541430.22437
[2025-11-22 16:42:19] 2025-11-22 21:41:18,813 | INFO     | sum of deviations: 629532548729.1465
[2025-11-22 16:42:19] 2025-11-22 21:41:18,814 | INFO     | mean x: 1763827422.0522273
[2025-11-22 16:42:19] 2025-11-22 21:41:18,814 | INFO     | mean y: 2914633.760368664
[2025-11-22 16:42:19] 2025-11-22 21:41:18,814 | INFO     | intersect: -12974572406.271175
[2025-11-22 16:42:19] 2025-11-22 21:41:18,814 | INFO     | chi2: 9.542057170608903
[2025-11-22 16:42:19] 2025-11-22 21:41:18,815 | INFO     | current memory leak: 7.36 B/s (using 651 data points, chi2=9.54)
[2025-11-22 16:42:19] 2025-11-22 21:41:18,816 | INFO     | could have reported an average CPU frequency of 3796 MHz (26 samples)
[2025-11-22 16:42:19] 2025-11-22 21:41:18,816 | INFO     | ..............................
[2025-11-22 16:42:19] 2025-11-22 21:41:18,816 | INFO     | . Timing measurements:
[2025-11-22 16:42:19] 2025-11-22 21:41:18,816 | INFO     | . get job = 0 s
[2025-11-22 16:42:19] 2025-11-22 21:41:18,816 | INFO     | . initial setup = 6 s
[2025-11-22 16:42:19] 2025-11-22 21:41:18,816 | INFO     | . payload setup = 53 s
[2025-11-22 16:42:19] 2025-11-22 21:41:18,816 | INFO     | . stage-in = 0 s
[2025-11-22 16:42:19] 2025-11-22 21:41:18,816 | INFO     | . payload execution = 40708 s
[2025-11-22 16:42:19] 2025-11-22 21:41:18,816 | INFO     | . stage-out = 7 s
[2025-11-22 16:42:19] 2025-11-22 21:41:18,817 | INFO     | . log creation = 2 s
[2025-11-22 16:42:19] 2025-11-22 21:41:18,817 | INFO     | ..............................
[2025-11-22 16:42:19] 2025-11-22 21:41:19,247 | INFO     | 
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | job summary report
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | --------------------------------------------------
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | PanDA job id: 6894267630
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | task id: 47533967
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | errors: (none)
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | pilot state: finished 
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | transexitcode: 0
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | exeerrorcode: 0
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | exeerrordiag: 
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | exitcode: 0
[2025-11-22 16:42:19] 2025-11-22 21:41:19,251 | INFO     | exitmsg: OK
[2025-11-22 16:42:19] 2025-11-22 21:41:19,252 | INFO     | cpuconsumptiontime: 138840 s
[2025-11-22 16:42:19] 2025-11-22 21:41:19,252 | INFO     | nevents: 1000
[2025-11-22 16:42:19] 2025-11-22 21:41:19,252 | INFO     | neventsw: 0
[2025-11-22 16:42:19] 2025-11-22 21:41:19,252 | INFO     | pid: 3649013
[2025-11-22 16:42:19] 2025-11-22 21:41:19,252 | INFO     | pgrp: 3649013
[2025-11-22 16:42:19] 2025-11-22 21:41:19,256 | INFO     | corecount: 8
[2025-11-22 16:42:19] 2025-11-22 21:41:19,256 | INFO     | event service: False
[2025-11-22 16:42:19] 2025-11-22 21:41:19,256 | INFO     | sizes: {0: 2297978, 1: 2298663, 2: 2298862, 3: 2298862, 14: 2298890, 25: 2298918, 36: 2299074, 44: 2299364, 46: 2299392, 40767: 2342851, 40768: 2342850, 40776: 235
[2025-11-22 16:42:19] 2025-11-22 21:41:19,256 | INFO     | --------------------------------------------------
[2025-11-22 16:42:19] 2025-11-22 21:41:19,256 | INFO     | 
[2025-11-22 16:42:19] 2025-11-22 21:41:19,256 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 16:42:19] 2025-11-22 21:41:19,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 16:42:19] 2025-11-22 21:41:19,329 | INFO     | job 6894267630 has completed (purged errors)
[2025-11-22 16:42:19] 2025-11-22 21:41:19,330 | INFO     | overall cleanup function is called
[2025-11-22 16:42:19] 2025-11-22 21:41:20,381 | INFO     | --- collectZombieJob: --- 10, [3649013]
[2025-11-22 16:42:19] 2025-11-22 21:41:20,381 | INFO     | zombie collector waiting for pid 3649013
[2025-11-22 16:42:19] 2025-11-22 21:41:20,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 16:42:19] 2025-11-22 21:41:20,381 | INFO     | collected zombie processes
[2025-11-22 16:42:19] 2025-11-22 21:41:20,381 | INFO     | will attempt to kill all subprocesses of pid=3649013
[2025-11-22 16:42:19] 2025-11-22 21:41:22,574 | INFO     | process IDs to be killed: [3649013] (in reverse order)
[2025-11-22 16:42:19] 2025-11-22 21:41:22,814 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 16:42:19] 2025-11-22 21:41:22,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 16:42:19] 2025-11-22 21:41:23,301 | INFO     | did not find any defunct processes belonging to 3649013
[2025-11-22 16:42:19] 2025-11-22 21:41:23,394 | INFO     | did not find any defunct processes belonging to 3649013
[2025-11-22 16:42:19] 2025-11-22 21:41:23,402 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 16:42:19] 2025-11-22 21:41:23,402 | INFO     | ready for new job
[2025-11-22 16:42:19] 2025-11-22 21:41:23,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 16:42:19] 2025-11-22 21:41:23,404 | INFO     | ***************************************
[2025-11-22 16:42:19] 2025-11-22 21:41:23,404 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 16:42:19] 2025-11-22 21:41:23,406 | INFO     | ***************************************
[2025-11-22 16:42:19] 2025-11-22 21:41:23,406 | INFO     | 
[2025-11-22 16:42:19] 2025-11-22 21:41:23,411 | INFO     | architecture information:
[2025-11-22 16:42:19] 2025-11-22 21:41:23,412 | INFO     | executing command: cat /etc/os-release
[2025-11-22 16:42:19] 2025-11-22 21:41:23,440 | INFO     | cat /etc/os-release:
[2025-11-22 16:42:19] NAME="CentOS Linux"
[2025-11-22 16:42:19] VERSION="7 (Core)"
[2025-11-22 16:42:19] ID="centos"
[2025-11-22 16:42:19] ID_LIKE="rhel fedora"
[2025-11-22 16:42:19] VERSION_ID="7"
[2025-11-22 16:42:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 16:42:19] ANSI_COLOR="0;31"
[2025-11-22 16:42:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 16:42:19] HOME_URL="https://www.centos.org/"
[2025-11-22 16:42:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 16:42:19] 
[2025-11-22 16:42:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 16:42:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 16:42:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 16:42:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 16:42:19] 
[2025-11-22 16:42:19] 2025-11-22 21:41:23,440 | INFO     | ***************************************
[2025-11-22 16:42:19] 2025-11-22 21:41:23,944 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 16:42:19] 2025-11-22 21:41:24,003 | INFO     | sufficient remaining disk space (161367457792 B)
[2025-11-22 16:42:19] 2025-11-22 21:41:24,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 16:42:19] 2025-11-22 21:41:24,003 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 16:42:19] 2025-11-22 21:41:24,003 | INFO     | update_server=False
[2025-11-22 16:42:19] 2025-11-22 21:41:24,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 16:42:19] 2025-11-22 21:41:24,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 16:42:19] 2025-11-22 21:41:24,004 | INFO     | aborting loop
[2025-11-22 16:42:19] 2025-11-22 21:41:24,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 16:42:19] 2025-11-22 21:41:24,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 16:42:19] 2025-11-22 21:41:24,526 | INFO     | all payload control threads have been joined
[2025-11-22 16:42:19] 2025-11-22 21:41:24,968 | INFO     | all data control threads have been joined
[2025-11-22 16:42:19] 2025-11-22 21:41:25,009 | INFO     | [job] retrieve thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:25,010 | INFO     | [job] job monitor thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:25,308 | INFO     | [job] queue monitor thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:25,475 | INFO     | all job control threads have been joined
[2025-11-22 16:42:19] 2025-11-22 21:41:25,537 | INFO     | [payload] control thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:25,576 | INFO     | [payload] failed_post thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:25,704 | INFO     | [payload] validate_post thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:25,813 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:25,833 | INFO     | [job] validate thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:25,885 | INFO     | [data] copytool_in thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:25,973 | INFO     | [data] control thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:26,013 | INFO     | [data] copytool_out thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:26,105 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:26,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 16:42:19] 2025-11-22 21:41:26,424 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:26,431 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:26,480 | INFO     | [job] control thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:30,344 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 16:42:19] 2025-11-22 21:41:52,631 | INFO     | PID=3613820 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 16:42:19] 2025-11-22 21:41:52,632 | INFO     | .. there are 50 such processes running
[2025-11-22 16:42:19] 2025-11-22 21:41:52,633 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 16:42:19] 2025-11-22 21:41:52,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 16:42:19] 2025-11-22 21:41:52,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 16:42:19] 2025-11-22 21:42:09,489 | INFO     | [monitor] cgroup control has ended
[2025-11-22 16:42:19] 2025-11-22 21:42:11,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140668157282112)>', '<ExcThread(monitor, started 140667812566784)>']
[2025-11-22 16:42:19] 2025-11-22 21:42:11,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 16:42:19] 2025-11-22 21:42:11,743 | INFO     | [monitor] control thread has ended
[2025-11-22 16:42:19] 2025-11-22 21:42:16,337 | INFO     | all workflow threads have been joined
[2025-11-22 16:42:19] 2025-11-22 21:42:16,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 16:42:19] 2025-11-22 21:42:16,353 | INFO     | traces error code: 0
[2025-11-22 16:42:19] 2025-11-22 21:42:16,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 16:42:19] 2025-11-22 21:42:18,115 [wrapper] ==== pilot stdout END ====
[2025-11-22 16:42:19] 2025-11-22 21:42:18,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 16:42:19] 2025-11-22 21:42:18,128 [wrapper] pilotpid: 3613820
[2025-11-22 16:42:19] 2025-11-22 21:42:18,133 [wrapper] Pilot exit status: 0
[2025-11-22 16:42:19] 2025-11-22 21:42:18,239 [wrapper] pandaids: 6894267630
[2025-11-22 16:42:19] 2025-11-22 21:42:18,655 [wrapper] cleanup supervisor_pilot 2242673 3613821
[2025-11-22 16:42:19] 2025-11-22 21:42:18,683 [wrapper] Test setup, not cleaning
[2025-11-22 16:42:19] 2025-11-22 21:42:18,707 [wrapper] apfmon messages muted
[2025-11-22 16:42:19] 2025-11-22 21:42:18,727 [wrapper] ==== wrapper stdout END ====
[2025-11-22 16:42:19] 2025-11-22 21:42:18,747 [wrapper] ==== wrapper stderr END ====
[2025-11-22 16:42:19]  *** Error codes and diagnostics ***
[2025-11-22 16:42:19]     "exeErrorCode": 0,
[2025-11-22 16:42:19]     "exeErrorDiag": "",
[2025-11-22 16:42:19]     "pilotErrorCode": 0,
[2025-11-22 16:42:19]     "pilotErrorDiag": "",
[2025-11-22 16:42:19]  *** Listing of results directory ***
[2025-11-22 16:42:19] total 1320104
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 00:09 pilot3.tar.gz
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 00:22 queuedata.json
[2025-11-22 16:42:19] -rwx------. 1 boincer umatlas     36292 Nov 21 00:23 runpilot2-wrapper.sh
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas       100 Nov 22 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 16:42:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 22 05:18 run_atlas
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas       105 Nov 22 05:18 job.xml
[2025-11-22 16:42:19] -rw-r--r--. 2 boincer umatlas 412049527 Nov 22 05:18 EVNT.47493127._002243.pool.root.1
[2025-11-22 16:42:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 05:18 start_atlas.sh
[2025-11-22 16:42:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 22 05:18 shared
[2025-11-22 16:42:19] -rw-r--r--. 2 boincer umatlas    590104 Nov 22 05:18 input.tar.gz
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas         0 Nov 22 05:18 boinc_lockfile
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas      2785 Nov 22 05:18 pandaJob.out
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas        57 Nov 22 05:18 setup.sh.local
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas    989768 Nov 22 05:19 agis_schedconf.cvmfs.json
[2025-11-22 16:42:19] drwx------. 5 boincer umatlas      4096 Nov 22 05:19 pilot3
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas       533 Nov 22 16:17 boinc_task_state.xml
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas      7173 Nov 22 16:39 init_data.xml
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas 922366687 Nov 22 16:40 HITS.47533967._002150.pool.root.1
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas      1077 Nov 22 16:40 memory_monitor_summary.json
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas   1526164 Nov 22 16:40 agis_ddmendpoints.agis.ALL.json
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas   1876758 Nov 22 16:40 log.47533967._002150.job.log.tgz.1
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas      8655 Nov 22 16:41 heartbeat.json
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas        95 Nov 22 16:41 pilot_heartbeat.json
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas      4825 Nov 22 16:42 pilotlog.txt
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas        29 Nov 22 16:42 wrapper_checkpoint.txt
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 16:42 boinc_mmap_file
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas   4842724 Nov 22 16:42 log.47533967._002150.job.log.1
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas       353 Nov 22 16:42 output.list
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas       620 Nov 22 16:42 runtime_log
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas   6737920 Nov 22 16:42 result.tar.gz
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas      9338 Nov 22 16:42 runtime_log.err
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas       665 Nov 22 16:42 hQoKDmfnYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmO6IKDmRfOWen.diag
[2025-11-22 16:42:19] -rw-r--r--. 1 boincer umatlas     21813 Nov 22 16:42 stderr.txt
[2025-11-22 16:42:19] HITS file was successfully produced:
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas 922366687 Nov 22 16:40 shared/HITS.pool.root.1
[2025-11-22 16:42:19]  *** Contents of shared directory: ***
[2025-11-22 16:42:19] total 1310332
[2025-11-22 16:42:19] -rw-r--r--. 2 boincer umatlas 412049527 Nov 22 05:18 ATLAS.root_0
[2025-11-22 16:42:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 22 05:18 start_atlas.sh
[2025-11-22 16:42:19] -rw-r--r--. 2 boincer umatlas    590104 Nov 22 05:18 input.tar.gz
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas 922366687 Nov 22 16:40 HITS.pool.root.1
[2025-11-22 16:42:19] -rw-------. 1 boincer umatlas   6737920 Nov 22 16:42 result.tar.gz
16:42:20 (3596876): run_atlas exited; CPU time 139664.317214
16:42:20 (3596876): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN