Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-23 11:46:40 (168517): vboxwrapper version 26210
2025-11-23 11:46:40 (168517): BOINC client version: 8.2.6
2025-11-23 11:46:40 (168517): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2025-11-23 11:46:40 (168517): Successfully copied 'init_data.xml' to the shared directory.
2025-11-23 11:46:40 (168517): Create VM. (boinc_e8139443b96e00e5, slot#0)
2025-11-23 11:46:40 (168517): Setting Memory Size for VM. (4800MB)
2025-11-23 11:46:40 (168517): Setting CPU Count for VM. (8)
2025-11-23 11:46:40 (168517): Setting Chipset Options for VM.
2025-11-23 11:46:40 (168517): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-23 11:46:40 (168517): Setting Boot Options for VM.
2025-11-23 11:46:40 (168517): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-23 11:46:40 (168517): Enabling VM Network Access.
2025-11-23 11:46:40 (168517): Disabling USB Support for VM.
2025-11-23 11:46:40 (168517): Disabling COM Port Support for VM.
2025-11-23 11:46:40 (168517): Disabling LPT Port Support for VM.
2025-11-23 11:46:40 (168517): Disabling Audio Support for VM.
2025-11-23 11:46:40 (168517): Disabling Clipboard Support for VM.
2025-11-23 11:46:40 (168517): Disabling Drag and Drop Support for VM.
2025-11-23 11:46:40 (168517): Adding storage controller(s) to VM.
2025-11-23 11:46:40 (168517): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-23 11:46:40 (168517): Adding VirtualBox Guest Additions to VM.
2025-11-23 11:46:40 (168517): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-23 11:46:40 (168517): forwarding host port 52563 to guest port 80
2025-11-23 11:46:40 (168517): Enabling remote desktop for VM.
2025-11-23 11:46:40 (168517): Enabling shared directory for VM.
2025-11-23 11:46:40 (168517): Starting VM using VBoxManage interface. (boinc_e8139443b96e00e5, slot#0)
2025-11-23 11:46:41 (168517): Successfully started VM. (PID = '169005')
2025-11-23 11:46:41 (168517): Reporting VM Process ID to BOINC.
2025-11-23 11:46:41 (168517): Guest Log: BIOS: VirtualBox 7.2.4
2025-11-23 11:46:41 (168517): Guest Log: CPUID EDX: 0x178bfbff
2025-11-23 11:46:41 (168517): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-23 11:46:41 (168517): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-23 11:46:41 (168517): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-23 11:46:41 (168517): Detected: Web Application Enabled (http://localhost:52563)
2025-11-23 11:46:41 (168517): Detected: Remote Desktop Enabled (localhost:60919)
2025-11-23 11:46:41 (168517): Preference change detected
2025-11-23 11:46:41 (168517): Setting CPU throttle for VM. (100%)
2025-11-23 11:46:41 (168517): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-23 11:46:43 (168517): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-23 11:46:43 (168517): Guest Log: BIOS: Booting from Hard Disk...
2025-11-23 11:46:46 (168517): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-23 11:46:46 (168517): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-23 11:46:46 (168517): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-23 11:46:52 (168517): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-23 11:46:52 (168517): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-23 11:46:55 (168517): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-23 11:46:55 (168517): Guest Log: 00:00:00.000061 main     Log opened 2025-11-23T10:46:53.119172000Z
2025-11-23 11:46:55 (168517): Guest Log: 00:00:00.000110 main     OS Product: Linux
2025-11-23 11:46:55 (168517): Guest Log: 00:00:00.000119 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-23 11:46:55 (168517): Guest Log: 00:00:00.000127 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-23 11:46:55 (168517): Guest Log: 00:00:00.000135 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-23 11:46:55 (168517): Guest Log: 00:00:00.000135 main     Process ID: 1366
2025-11-23 11:46:55 (168517): Guest Log: 00:00:00.000135 main     Package type: LINUX_64BITS_GENERIC
2025-11-23 11:46:55 (168517): Guest Log: 00:00:00.000415 main     5.2.32 r132073 started. Verbose level = 0
2025-11-23 11:46:55 (168517): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-23 11:46:55 (168517): Guest Log: [INFO] Mounting shared directory
2025-11-23 11:46:55 (168517): Guest Log: [INFO] Checking for init_data.xml
2025-11-23 11:47:19 (168517): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-23 11:47:19 (168517): Guest Log: [INFO] Detected branch: prod
2025-11-23 11:47:20 (168517): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-23 11:47:20 (168517): Guest Log: Copying input files
2025-11-23 11:47:21 (168517): Guest Log: Copied input files into RunAtlas.
2025-11-23 11:47:21 (168517): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-23 11:47:21 (168517): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-23 11:47:21 (168517): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-23 11:47:21 (168517): Guest Log: Further information can be found at the LHC@home message board.
2025-11-23 11:47:29 (168517): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-23 11:47:29 (168517): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-23 11:47:29 (168517): Guest Log: 2.6.3.0 1666 0 32188 153205 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-23 11:47:30 (168517): Guest Log: copied the webapp to /var/www
2025-11-23 11:47:30 (168517): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-23 11:47:30 (168517): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-23 11:47:30 (168517): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-23 11:47:30 (168517): Guest Log:  *** Starting ATLAS job. (PandaID=6894262101 taskID=47533967) ***
2025-11-23 13:25:42 (168517): Status Report: Elapsed Time: '6000.000000'
2025-11-23 13:25:42 (168517): Status Report: CPU Time: '51739.160000'
2025-11-23 14:48:23 (168517): Guest Log:  *** Job finished ***
2025-11-23 14:48:23 (168517): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:04,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:05,554 | INFO     | [monitor] cgroup control has ended
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:08,229 | INFO     | [data] queue_monitor thread has finished
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:10,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726776522560)>', '<ExcThread(monitor, started 139725738333952)>']
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:10,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:10,469 | INFO     | [monitor] control thread has ended
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,297 | INFO     | all workflow threads have been joined
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,297 | INFO     | end of generic workflow (traces error code: 0)
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,297 | INFO     | traces error code: 0
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,297 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,350 [wrapper] ==== pilot stdout END ====
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,353 [wrapper] ==== wrapper stdout RESUME ====
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,355 [wrapper] pilotpid: 6083
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,357 [wrapper] Pilot exit status: 0
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,372 [wrapper] pandaids: 6894262101
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,389 [wrapper] cleanup supervisor_pilot 13847 6084
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,391 [wrapper] Test setup, not cleaning
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,393 [wrapper] apfmon messages muted
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,395 [wrapper] ==== wrapper stdout END ====
2025-11-23 14:48:23 (168517): Guest Log: 2025-11-23 13:48:15,396 [wrapper] ==== wrapper stderr END ====
2025-11-23 14:48:23 (168517): Guest Log:  *** Error codes and diagnostics ***
2025-11-23 14:48:23 (168517): Guest Log:     "exeErrorCode": 0,
2025-11-23 14:48:23 (168517): Guest Log:     "exeErrorDiag": "",
2025-11-23 14:48:23 (168517): Guest Log:     "pilotErrorCode": 0,
2025-11-23 14:48:23 (168517): Guest Log:     "pilotErrorDiag": "",
2025-11-23 14:48:23 (168517): Guest Log:  *** Listing of results directory ***
2025-11-23 14:48:23 (168517): Guest Log: total 913480
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 04:12 pilot3.tar.gz
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 04:43 queuedata.json
2025-11-23 14:48:23 (168517): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 04:44 runpilot2-wrapper.sh
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 23 10:47 start_atlas.sh
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 atlas atlas    590108 Nov 23 10:47 input.tar.gz
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 atlas atlas      9624 Nov 23 10:47 init_data.xml
2025-11-23 14:48:23 (168517): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 23 10:47 EVNT.47493127._002197.pool.root.1 -> /data/./ATLAS.root_0
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 23 10:47 pandaJob.out
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas    989784 Nov 23 10:47 agis_schedconf.cvmfs.json
2025-11-23 14:48:23 (168517): Guest Log: drwx------. 5 atlas atlas      4096 Nov 23 10:47 pilot3
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas        95 Nov 23 13:47 pilot_heartbeat.json
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas 925592003 Nov 23 13:47 HITS.47533967._001688.pool.root.1
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas      1036 Nov 23 13:47 memory_monitor_summary.json
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 23 13:47 agis_ddmendpoints.agis.ALL.json
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas   1502419 Nov 23 13:47 log.47533967._001688.job.log.tgz.1
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas      8626 Nov 23 13:47 heartbeat.json
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas      4798 Nov 23 13:48 pilotlog.txt
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas   1478236 Nov 23 13:48 log.47533967._001688.job.log.1
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas       353 Nov 23 13:48 output.list
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 23 13:48 runtime_log
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas   3000320 Nov 23 13:48 result.tar.gz
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 atlas atlas      8978 Nov 23 13:48 runtime_log.err
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas       733 Nov 23 13:48 f2DMDmWBYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmL2IKDmwOyXen.diag
2025-11-23 14:48:23 (168517): Guest Log: Looking for outputfile HITS.47533967._001688.pool.root.1
2025-11-23 14:48:23 (168517): Guest Log: HITS file was successfully produced
2025-11-23 14:48:23 (168517): Guest Log: -rw-------. 1 atlas atlas 925592003 Nov 23 13:47 /home/atlas/RunAtlas/HITS.47533967._001688.pool.root.1
2025-11-23 14:48:23 (168517): Guest Log: Successfully finished the ATLAS job!
2025-11-23 14:48:23 (168517): Guest Log: Copying the results back to the shared directory!
2025-11-23 14:48:23 (168517): Guest Log:  *** Contents of shared directory: ***
2025-11-23 14:48:23 (168517): Guest Log: total 403840
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 root root 409901484 Nov 23 10:46 ATLAS.root_0
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 root root      9624 Nov 23 10:46 init_data.xml
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 root root    590108 Nov 23 10:46 input.tar.gz
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 root root   3000320 Nov 23  2025 result.tar.gz
2025-11-23 14:48:23 (168517): Guest Log: -rw-r--r--. 1 root root     15847 Nov 23 10:46 start_atlas.sh
2025-11-23 14:48:23 (168517): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-23 14:48:23 (168517): VM Completion File Detected.
2025-11-23 14:48:23 (168517): Powering off VM.
2025-11-23 14:48:23 (168517): Successfully stopped VM.
2025-11-23 14:48:23 (168517): Deregistering VM. (boinc_e8139443b96e00e5, slot#0)
2025-11-23 14:48:23 (168517): Removing network bandwidth throttle group from VM.
2025-11-23 14:48:23 (168517): Removing VM from VirtualBox.
2025-11-23 14:48:28 (168517): called boinc_finish(0)

</stderr_txt>
]]>

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