Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-26 12:31:42 (22584): vboxwrapper version 26210
2025-11-26 12:31:42 (22584): BOINC client version: 8.2.4
2025-11-26 12:31:43 (22584): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-11-26 12:31:43 (22584): Successfully copied 'init_data.xml' to the shared directory.
2025-11-26 12:31:44 (22584): Create VM. (boinc_7017766bfda31ca2, slot#12)
2025-11-26 12:31:44 (22584): Setting Memory Size for VM. (4400MB)
2025-11-26 12:31:44 (22584): Setting CPU Count for VM. (4)
2025-11-26 12:31:45 (22584): Setting Chipset Options for VM.
2025-11-26 12:31:45 (22584): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-26 12:31:45 (22584): Setting Boot Options for VM.
2025-11-26 12:31:46 (22584): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-26 12:31:46 (22584): Enabling VM Network Access.
2025-11-26 12:31:46 (22584): Disabling USB Support for VM.
2025-11-26 12:31:47 (22584): Disabling COM Port Support for VM.
2025-11-26 12:31:47 (22584): Disabling LPT Port Support for VM.
2025-11-26 12:31:47 (22584): Disabling Audio Support for VM.
2025-11-26 12:31:47 (22584): Disabling Clipboard Support for VM.
2025-11-26 12:31:48 (22584): Disabling Drag and Drop Support for VM.
2025-11-26 12:31:48 (22584): Adding storage controller(s) to VM.
2025-11-26 12:31:48 (22584): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-26 12:31:51 (22584): Adding VirtualBox Guest Additions to VM.
2025-11-26 12:31:51 (22584): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-26 12:31:51 (22584): forwarding host port 58977 to guest port 80
2025-11-26 12:31:51 (22584): Enabling remote desktop for VM.
2025-11-26 12:31:52 (22584): Required extension pack not installed, remote desktop not enabled.
2025-11-26 12:31:52 (22584): Enabling shared directory for VM.
2025-11-26 12:31:52 (22584): Starting VM using VBoxManage interface. (boinc_7017766bfda31ca2, slot#12)
2025-11-26 12:31:57 (22584): Successfully started VM. (PID = '22980')
2025-11-26 12:31:57 (22584): Reporting VM Process ID to BOINC.
2025-11-26 12:31:57 (22584): Guest Log: BIOS: VirtualBox 7.1.6
2025-11-26 12:31:57 (22584): Guest Log: CPUID EDX: 0x178bfbff
2025-11-26 12:31:57 (22584): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-26 12:31:57 (22584): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-26 12:31:57 (22584): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-26 12:31:57 (22584): Detected: Web Application Enabled (http://localhost:58977)
2025-11-26 12:31:57 (22584): Preference change detected
2025-11-26 12:31:57 (22584): Setting CPU throttle for VM. (97%)
2025-11-26 12:31:57 (22584): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-26 12:31:59 (22584): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-26 12:31:59 (22584): Guest Log: BIOS: Booting from Hard Disk...
2025-11-26 12:32:02 (22584): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-26 12:32:02 (22584): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-26 12:32:02 (22584): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-26 12:32:07 (22584): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-26 12:32:07 (22584): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-26 12:32:13 (22584): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-26 12:32:13 (22584): Guest Log: 00:00:00.000132 main     Log opened 2025-11-26T12:32:10.731160000Z
2025-11-26 12:32:13 (22584): Guest Log: 00:00:00.000199 main     OS Product: Linux
2025-11-26 12:32:13 (22584): Guest Log: 00:00:00.000228 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-26 12:32:13 (22584): Guest Log: 00:00:00.000240 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-26 12:32:13 (22584): Guest Log: 00:00:00.000253 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-26 12:32:13 (22584): Guest Log: 00:00:00.000253 main     Process ID: 1310
2025-11-26 12:32:13 (22584): Guest Log: 00:00:00.000253 main     Package type: LINUX_64BITS_GENERIC
2025-11-26 12:32:13 (22584): Guest Log: 00:00:00.000832 main     5.2.32 r132073 started. Verbose level = 0
2025-11-26 12:32:13 (22584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-26 12:32:13 (22584): Guest Log: [INFO] Mounting shared directory
2025-11-26 12:32:13 (22584): Guest Log: [INFO] Checking for init_data.xml
2025-11-26 12:32:17 (22584): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-26 12:32:17 (22584): Guest Log: [INFO] Detected branch: prod
2025-11-26 12:32:17 (22584): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-26 12:32:17 (22584): Guest Log: Copying input files
2025-11-26 12:32:19 (22584): Guest Log: Copied input files into RunAtlas.
2025-11-26 12:32:19 (22584): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-26 12:32:19 (22584): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-26 12:32:19 (22584): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-26 12:32:19 (22584): Guest Log: Further information can be found at the LHC@home message board.
2025-11-26 12:32:43 (22584): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-26 12:32:48 (22584): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-26 12:32:48 (22584): Guest Log: 2.6.3.0 1584 0 32028 153322 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-26 12:32:50 (22584): Guest Log: copied the webapp to /var/www
2025-11-26 12:32:50 (22584): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-26 12:32:50 (22584): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-26 12:32:50 (22584): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-26 12:32:50 (22584): Guest Log:  *** Starting ATLAS job. (PandaID=6893887187 taskID=47523449) ***
2025-11-26 14:12:14 (22584): Status Report: Elapsed Time: '6000.000000'
2025-11-26 14:12:14 (22584): Status Report: CPU Time: '21410.765625'
2025-11-26 15:52:34 (22584): Status Report: Elapsed Time: '12000.000000'
2025-11-26 15:52:34 (22584): Status Report: CPU Time: '43566.437500'
2025-11-26 17:32:52 (22584): Status Report: Elapsed Time: '18000.000000'
2025-11-26 17:32:52 (22584): Status Report: CPU Time: '65733.468750'
2025-11-26 17:48:57 (22584): Guest Log:  *** Job finished ***
2025-11-26 17:48:57 (22584): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:38,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:38,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:49,493 | INFO     | [monitor] cgroup control has ended
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:51,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622439126848)>', '<ExcThread(monitor, started 140621633275648)>']
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:51,873 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:51,873 | INFO     | [monitor] control thread has ended
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,403 | INFO     | all workflow threads have been joined
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,403 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,403 | INFO     | traces error code: 0
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,456 [wrapper] ==== pilot stdout END ====
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,460 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,463 [wrapper] pilotpid: 5984
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,466 [wrapper] Pilot exit status: 0
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,479 [wrapper] pandaids: 6893887187
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,499 [wrapper] cleanup supervisor_pilot 26612 5985
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,503 [wrapper] Test setup, not cleaning
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,506 [wrapper] apfmon messages muted
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,508 [wrapper] ==== wrapper stdout END ====
2025-11-26 17:48:57 (22584): Guest Log: 2025-11-26 17:48:56,511 [wrapper] ==== wrapper stderr END ====
2025-11-26 17:48:57 (22584): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 17:48:57 (22584): Guest Log:     "exeErrorCode": 0,
2025-11-26 17:48:57 (22584): Guest Log:     "exeErrorDiag": "",
2025-11-26 17:48:57 (22584): Guest Log:     "pilotErrorCode": 0,
2025-11-26 17:48:57 (22584): Guest Log:     "pilotErrorDiag": "",
2025-11-26 17:48:57 (22584): Guest Log:  *** Listing of results directory ***
2025-11-26 17:48:57 (22584): Guest Log: total 904704
2025-11-26 17:48:57 (22584): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 20 23:10 queuedata.json
2025-11-26 17:48:57 (22584): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 20 23:11 runpilot2-wrapper.sh
2025-11-26 17:48:57 (22584): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 20 23:11 pilot3.tar.gz
2025-11-26 17:48:57 (22584): Guest Log: -rwxr-xr-x. 1 atlas atlas     11898 Nov 26 12:32 init_data.xml
2025-11-26 17:48:57 (22584): Guest Log: -rwxr-xr-x. 1 atlas atlas    590094 Nov 26 12:32 input.tar.gz
2025-11-26 17:48:57 (22584): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 26 12:32 start_atlas.sh
2025-11-26 17:48:57 (22584): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 12:32 EVNT.47493127._000971.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 17:48:57 (22584): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 26 12:32 pandaJob.out
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas    991830 Nov 26 12:33 agis_schedconf.cvmfs.json
2025-11-26 17:48:57 (22584): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 12:33 pilot3
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas 915158329 Nov 26 17:47 HITS.47523449._009702.pool.root.1
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 17:47 pilot_heartbeat.json
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas      1030 Nov 26 17:47 memory_monitor_summary.json
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 17:48 agis_ddmendpoints.agis.ALL.json
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas   1171507 Nov 26 17:48 log.47523449._009702.job.log.tgz.1
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas      8599 Nov 26 17:48 heartbeat.json
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas      5063 Nov 26 17:48 pilotlog.txt
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas   2530820 Nov 26 17:48 log.47523449._009702.job.log.1
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 17:48 output.list
2025-11-26 17:48:57 (22584): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 17:48 runtime_log
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas   3727360 Nov 26 17:48 result.tar.gz
2025-11-26 17:48:57 (22584): Guest Log: -rw-r--r--. 1 atlas atlas      8734 Nov 26 17:48 runtime_log.err
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas       657 Nov 26 17:48 NOKKDmHzSg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmC9GKDmotAh1m.diag
2025-11-26 17:48:57 (22584): Guest Log: Looking for outputfile HITS.47523449._009702.pool.root.1
2025-11-26 17:48:57 (22584): Guest Log: HITS file was successfully produced
2025-11-26 17:48:57 (22584): Guest Log: -rw-------. 1 atlas atlas 915158329 Nov 26 17:47 /home/atlas/RunAtlas/HITS.47523449._009702.pool.root.1
2025-11-26 17:49:10 (22584): Guest Log: Successfully finished the ATLAS job!
2025-11-26 17:49:10 (22584): Guest Log: Copying the results back to the shared directory!
2025-11-26 17:49:10 (22584): Guest Log:  *** Contents of shared directory: ***
2025-11-26 17:49:11 (22584): Guest Log: total 1297084
2025-11-26 17:49:11 (22584): Guest Log: -rwxrwxrwx. 1 root root 408699485 Nov 26 12:31 ATLAS.root_0
2025-11-26 17:49:11 (22584): Guest Log: -rwxrwxrwx. 1 root root 915158329 Nov 26 17:49 HITS.pool.root.1
2025-11-26 17:49:11 (22584): Guest Log: -rwxrwxrwx. 1 root root     11898 Nov 26 12:31 init_data.xml
2025-11-26 17:49:11 (22584): Guest Log: -rwxrwxrwx. 1 root root    590094 Nov 22 10:33 input.tar.gz
2025-11-26 17:49:11 (22584): Guest Log: -rwxrwxrwx. 1 root root   3727360 Nov 26 17:49 result.tar.gz
2025-11-26 17:49:11 (22584): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 22 10:33 start_atlas.sh
2025-11-26 17:49:11 (22584): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 17:49:11 (22584): VM Completion File Detected.
2025-11-26 17:49:11 (22584): Powering off VM.
2025-11-26 17:49:12 (22584): Successfully stopped VM.
2025-11-26 17:49:12 (22584): Deregistering VM. (boinc_7017766bfda31ca2, slot#12)
2025-11-26 17:49:12 (22584): Removing network bandwidth throttle group from VM.
2025-11-26 17:49:13 (22584): Removing VM from VirtualBox.
2025-11-26 17:49:18 (22584): called boinc_finish(0)

</stderr_txt>
]]>

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