Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
04:27:09 (995408): wrapper (7.7.26015): starting
04:27:09 (995408): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 04:27:09] Arguments: --nthreads 4
[2025-11-22 04:27:09] Threads: 4
[2025-11-22 04:27:09] Checking for CVMFS
[2025-11-22 04:27:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 04:27:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 04:27:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 04:27:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 04:27:31] 2.13.3.0 995618 0 24216 153168 3 1 1670498 4096001 0 130560 0 0 0.000 1292 770 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-22 04:27:31] CVMFS is ok
[2025-11-22 04:27:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 04:27:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 04:27:31] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-22 04:27:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-22 04:27:31] Further information can be found at the LHC@home message board.
[2025-11-22 04:27:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 04:27:31] Checking for apptainer binary...
[2025-11-22 04:27:31] apptainer is not installed, using version from CVMFS
[2025-11-22 04:27:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 04:27:31] yy
[2025-11-22 04:27:31] apptainer works
[2025-11-22 04:27:31] Set ATHENA_PROC_NUMBER=4
[2025-11-22 04:27:31] Set ATHENA_CORE_NUMBER=4
[2025-11-22 04:27:31] Starting ATLAS job with PandaID=6895331884
[2025-11-22 04:27:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 11:55:25]  *** The last 200 lines of the pilot log: ***
[2025-11-22 11:55:25] 2025-11-22 17:54:25,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,488 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 11:55:25] 2025-11-22 17:54:25,489 | INFO     | found 48 cores (48 cores per socket, 1 socket) , CPU MHz: 2494.138000000002
[2025-11-22 11:55:25] 2025-11-22 17:54:25,493 | INFO     | using path: /data/boinc/slots/3/PanDA_Pilot-6895331884/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,493 | INFO     | extracted standard info from prmon json
[2025-11-22 11:55:25] 2025-11-22 17:54:25,493 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 11:55:25] 2025-11-22 17:54:25,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 11:55:25] 2025-11-22 17:54:25,496 | INFO     | fitting pss+swap vs Time
[2025-11-22 11:55:25] 2025-11-22 17:54:25,496 | INFO     | sum of square deviations: 26234315140.0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,498 | INFO     | sum of deviations: 75983425058.99995
[2025-11-22 11:55:25] 2025-11-22 17:54:25,498 | INFO     | mean x: 1763820643.0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,498 | INFO     | mean y: 2319075.719817768
[2025-11-22 11:55:25] 2025-11-22 17:54:25,498 | INFO     | intersect: -5106300414.810081
[2025-11-22 11:55:25] 2025-11-22 17:54:25,498 | INFO     | chi2: 2.4532736390080165
[2025-11-22 11:55:25] 2025-11-22 17:54:25,499 | INFO     | sum of square deviations: 25348093872.5
[2025-11-22 11:55:25] 2025-11-22 17:54:25,500 | INFO     | sum of deviations: 121876329270.99997
[2025-11-22 11:55:25] 2025-11-22 17:54:25,500 | INFO     | mean x: 1763820490.5
[2025-11-22 11:55:25] 2025-11-22 17:54:25,500 | INFO     | mean y: 2326927.050691244
[2025-11-22 11:55:25] 2025-11-22 17:54:25,501 | INFO     | intersect: -8478309445.703639
[2025-11-22 11:55:25] 2025-11-22 17:54:25,501 | INFO     | chi2: 1.5528225790421413
[2025-11-22 11:55:25] 2025-11-22 17:54:25,501 | INFO     | current chi2=1.5528225790421413 (change=36.70406128563683 %)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,501 | INFO     | sum of square deviations: 24482059030.0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,503 | INFO     | sum of deviations: 119276166756.00002
[2025-11-22 11:55:25] 2025-11-22 17:54:25,503 | INFO     | mean x: 1763820338.0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,503 | INFO     | mean y: 2326469.3543123542
[2025-11-22 11:55:25] 2025-11-22 17:54:25,503 | INFO     | intersect: -8590975609.736063
[2025-11-22 11:55:25] 2025-11-22 17:54:25,503 | INFO     | chi2: 1.5530004317552586
[2025-11-22 11:55:25] 2025-11-22 17:54:25,503 | INFO     | current chi2=1.5530004317552586 (change=-0.011453511529116854 %)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,503 | INFO     | right removable region: 428
[2025-11-22 11:55:25] 2025-11-22 17:54:25,503 | INFO     | sum of square deviations: 25348093872.5
[2025-11-22 11:55:25] 2025-11-22 17:54:25,505 | INFO     | sum of deviations: 12908251541.000008
[2025-11-22 11:55:25] 2025-11-22 17:54:25,505 | INFO     | mean x: 1763820795.5
[2025-11-22 11:55:25] 2025-11-22 17:54:25,505 | INFO     | mean y: 2329870.6912442395
[2025-11-22 11:55:25] 2025-11-22 17:54:25,505 | INFO     | intersect: -895877411.3269684
[2025-11-22 11:55:25] 2025-11-22 17:54:25,505 | INFO     | chi2: 0.9941956521073179
[2025-11-22 11:55:25] 2025-11-22 17:54:25,505 | INFO     | current chi2=0.9941956521073179 (change=59.47473464438635 %)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,506 | INFO     | sum of square deviations: 24482059030.0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,507 | INFO     | sum of deviations: 11824334367.0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,507 | INFO     | mean x: 1763820948.0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,507 | INFO     | mean y: 2330060.6363636362
[2025-11-22 11:55:25] 2025-11-22 17:54:25,507 | INFO     | intersect: -849559424.1130292
[2025-11-22 11:55:25] 2025-11-22 17:54:25,507 | INFO     | chi2: 0.9941044312942341
[2025-11-22 11:55:25] 2025-11-22 17:54:25,508 | INFO     | current chi2=0.9941044312942341 (change=0.00917533816310868 %)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,508 | INFO     | left removable region: 20
[2025-11-22 11:55:25] 2025-11-22 17:54:25,508 | INFO     | sum of square deviations: 21059899982.0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,509 | INFO     | sum of deviations: 57613507377.5
[2025-11-22 11:55:25] 2025-11-22 17:54:25,509 | INFO     | mean x: 1763820917.5
[2025-11-22 11:55:25] 2025-11-22 17:54:25,509 | INFO     | mean y: 2337368.9828431373
[2025-11-22 11:55:25] 2025-11-22 17:54:25,509 | INFO     | intersect: -4822942405.841828
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | chi2: 0.08008265282136705
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | current memory leak: 2.74 B/s (using 408 data points, chi2=0.08)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | could have reported an average CPU frequency of 2494 MHz (18 samples)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | ..............................
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | . Timing measurements:
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | . get job = 0 s
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | . initial setup = 3 s
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | . payload setup = 3 s
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | . stage-in = 0 s
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | . payload execution = 26770 s
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | . stage-out = 3 s
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | . log creation = 0 s
[2025-11-22 11:55:25] 2025-11-22 17:54:25,510 | INFO     | ..............................
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | 
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | job summary report
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | --------------------------------------------------
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | PanDA job id: 6895331884
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | task id: 47556137
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | errors: (none)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | pilot state: finished 
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | transexitcode: 0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | time since job start (26801s) is within the limit (172800.0s)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | exeerrorcode: 0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | exeerrordiag: 
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | exitcode: 0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | exitmsg: OK
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | cpuconsumptiontime: 106203 s
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | nevents: 1000
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | neventsw: 0
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | pid: 1006671
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | pgrp: 1006671
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | corecount: 4
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | event service: False
[2025-11-22 11:55:25] 2025-11-22 17:54:25,546 | INFO     | sizes: {0: 2298804, 3: 2299066, 11: 2299094, 26778: 2336775, 26782: 2345763, 26784: 2345819, 26788: 2346193}
[2025-11-22 11:55:25] 2025-11-22 17:54:25,547 | INFO     | --------------------------------------------------
[2025-11-22 11:55:25] 2025-11-22 17:54:25,547 | INFO     | 
[2025-11-22 11:55:25] 2025-11-22 17:54:25,547 | INFO     | executing command: ls -lF /data/boinc/slots/3
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,560 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 11:55:25] 2025-11-22 17:54:25,561 | INFO     | job 6895331884 has completed (purged errors)
[2025-11-22 11:55:25] 2025-11-22 17:54:25,561 | INFO     | overall cleanup function is called
[2025-11-22 11:55:25] 2025-11-22 17:54:26,568 | INFO     | --- collectZombieJob: --- 10, [1006671]
[2025-11-22 11:55:25] 2025-11-22 17:54:26,568 | INFO     | zombie collector waiting for pid 1006671
[2025-11-22 11:55:25] 2025-11-22 17:54:26,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 11:55:25] 2025-11-22 17:54:26,568 | INFO     | collected zombie processes
[2025-11-22 11:55:25] 2025-11-22 17:54:26,568 | INFO     | will attempt to kill all subprocesses of pid=1006671
[2025-11-22 11:55:25] 2025-11-22 17:54:26,644 | INFO     | process IDs to be killed: [1006671] (in reverse order)
[2025-11-22 11:55:25] 2025-11-22 17:54:26,676 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 11:55:25] 2025-11-22 17:54:26,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 11:55:25] 2025-11-22 17:54:26,678 | INFO     | did not find any defunct processes belonging to 1006671
[2025-11-22 11:55:25] 2025-11-22 17:54:26,680 | INFO     | did not find any defunct processes belonging to 1006671
[2025-11-22 11:55:25] 2025-11-22 17:54:26,680 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 11:55:25] 2025-11-22 17:54:26,680 | INFO     | ready for new job
[2025-11-22 11:55:25] 2025-11-22 17:54:26,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 11:55:25] 2025-11-22 17:54:26,681 | INFO     | ***************************************
[2025-11-22 11:55:25] 2025-11-22 17:54:26,681 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 11:55:25] 2025-11-22 17:54:26,681 | INFO     | ***************************************
[2025-11-22 11:55:25] 2025-11-22 17:54:26,681 | INFO     | 
[2025-11-22 11:55:25] 2025-11-22 17:54:26,682 | INFO     | pilot is running in a VM
[2025-11-22 11:55:25] 2025-11-22 17:54:26,682 | INFO     | architecture information:
[2025-11-22 11:55:25] 2025-11-22 17:54:26,683 | INFO     | executing command: cat /etc/os-release
[2025-11-22 11:55:25] 2025-11-22 17:54:26,691 | INFO     | cat /etc/os-release:
[2025-11-22 11:55:25] NAME="CentOS Linux"
[2025-11-22 11:55:25] VERSION="7 (Core)"
[2025-11-22 11:55:25] ID="centos"
[2025-11-22 11:55:25] ID_LIKE="rhel fedora"
[2025-11-22 11:55:25] VERSION_ID="7"
[2025-11-22 11:55:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 11:55:25] ANSI_COLOR="0;31"
[2025-11-22 11:55:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 11:55:25] HOME_URL="https://www.centos.org/"
[2025-11-22 11:55:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 11:55:25] 
[2025-11-22 11:55:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 11:55:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 11:55:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 11:55:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 11:55:25] 
[2025-11-22 11:55:25] 2025-11-22 17:54:26,691 | INFO     | ***************************************
[2025-11-22 11:55:25] 2025-11-22 17:54:27,194 | INFO     | executing command: df -mP /data/boinc/slots/3
[2025-11-22 11:55:25] 2025-11-22 17:54:27,206 | INFO     | sufficient remaining disk space (949857812480 B)
[2025-11-22 11:55:25] 2025-11-22 17:54:27,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 11:55:25] 2025-11-22 17:54:27,207 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 11:55:25] 2025-11-22 17:54:27,207 | INFO     | update_server=False
[2025-11-22 11:55:25] 2025-11-22 17:54:27,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 11:55:25] 2025-11-22 17:54:27,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:55:25] 2025-11-22 17:54:27,207 | INFO     | aborting loop
[2025-11-22 11:55:25] 2025-11-22 17:54:27,207 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-22 11:55:25] 2025-11-22 17:54:27,207 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 11:55:25] 2025-11-22 17:54:27,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 11:55:25] 2025-11-22 17:54:27,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 11:55:25] 2025-11-22 17:54:27,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:55:25] 2025-11-22 17:54:27,208 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 11:55:25] 2025-11-22 17:54:27,644 | INFO     | all payload control threads have been joined
[2025-11-22 11:55:25] 2025-11-22 17:54:27,684 | INFO     | all data control threads have been joined
[2025-11-22 11:55:25] 2025-11-22 17:54:27,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 11:55:25] 2025-11-22 17:54:27,853 | INFO     | all job control threads have been joined
[2025-11-22 11:55:25] 2025-11-22 17:54:28,212 | INFO     | [job] retrieve thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:28,212 | INFO     | [job] job monitor thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:28,213 | INFO     | [job] queue monitor thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:28,275 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:28,342 | INFO     | [data] copytool_in thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:28,533 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:28,545 | INFO     | [job] validate thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:28,563 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:28,650 | INFO     | [payload] control thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:28,690 | INFO     | [data] control thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:28,859 | INFO     | [job] control thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:29,104 | INFO     | [payload] validate_post thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:29,365 | INFO     | [payload] failed_post thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:29,824 | INFO     | [data] copytool_out thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:31,214 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:54:37,400 | INFO     | job.realtimelogging is not enabled
[2025-11-22 11:55:25] 2025-11-22 17:54:38,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 11:55:25] 2025-11-22 17:55:20,610 | INFO     | [monitor] cgroup control has ended
[2025-11-22 11:55:25] 2025-11-22 17:55:20,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136037888321344)>', '<ExcThread(monitor, started 136037477099264)>']
[2025-11-22 11:55:25] 2025-11-22 17:55:21,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 11:55:25] 2025-11-22 17:55:21,465 | INFO     | [monitor] control thread has ended
[2025-11-22 11:55:25] 2025-11-22 17:55:25,669 | INFO     | all workflow threads have been joined
[2025-11-22 11:55:25] 2025-11-22 17:55:25,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 11:55:25] 2025-11-22 17:55:25,670 | INFO     | traces error code: 0
[2025-11-22 11:55:25] 2025-11-22 17:55:25,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 11:55:25] 2025-11-22 17:55:25,731 [wrapper] ==== pilot stdout END ====
[2025-11-22 11:55:25] 2025-11-22 17:55:25,733 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 11:55:25] 2025-11-22 17:55:25,734 [wrapper] pilotpid: 999900
[2025-11-22 11:55:25] 2025-11-22 17:55:25,736 [wrapper] Pilot exit status: 0
[2025-11-22 11:55:25] 2025-11-22 17:55:25,742 [wrapper] pandaids: 6895331884
[2025-11-22 11:55:25] 2025-11-22 17:55:25,762 [wrapper] cleanup supervisor_pilot 1081667 999901
[2025-11-22 11:55:25] 2025-11-22 17:55:25,764 [wrapper] Test setup, not cleaning
[2025-11-22 11:55:25] 2025-11-22 17:55:25,766 [wrapper] apfmon messages muted
[2025-11-22 11:55:25] 2025-11-22 17:55:25,768 [wrapper] ==== wrapper stdout END ====
[2025-11-22 11:55:25] 2025-11-22 17:55:25,770 [wrapper] ==== wrapper stderr END ====
[2025-11-22 11:55:25]  *** Error codes and diagnostics ***
[2025-11-22 11:55:25]     "exeErrorCode": 0,
[2025-11-22 11:55:25]     "exeErrorDiag": "",
[2025-11-22 11:55:25]     "pilotErrorCode": 0,
[2025-11-22 11:55:25]     "pilotErrorDiag": "",
[2025-11-22 11:55:25]  *** Listing of results directory ***
[2025-11-22 11:55:25] total 1322272
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc      5112 Nov 21 17:50 queuedata.json
[2025-11-22 11:55:25] -rwx------ 1 boinc boinc     36292 Nov 21 17:51 runpilot2-wrapper.sh
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc    576529 Nov 21 17:51 pilot3.tar.gz
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc       100 Nov 22 04:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 11:55:25] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 04:27 run_atlas
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc       105 Nov 22 04:27 job.xml
[2025-11-22 11:55:25] -rw-r--r-- 2 boinc boinc 408410595 Nov 22 04:27 EVNT.47483658._000179.pool.root.1
[2025-11-22 11:55:25] -rw-r--r-- 2 boinc boinc    590100 Nov 22 04:27 input.tar.gz
[2025-11-22 11:55:25] -rw-r--r-- 2 boinc boinc     15847 Nov 22 04:27 start_atlas.sh
[2025-11-22 11:55:25] drwxrwx--x 2 boinc boinc      4096 Nov 22 04:27 shared
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc         0 Nov 22 04:27 boinc_setup_complete
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc      6059 Nov 22 04:27 init_data.xml
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc         0 Nov 22 04:27 boinc_lockfile
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc      2786 Nov 22 04:27 pandaJob.out
[2025-11-22 11:55:25] -rw------- 1 boinc boinc    989768 Nov 22 04:27 agis_schedconf.cvmfs.json
[2025-11-22 11:55:25] drwx------ 5 boinc boinc      4096 Nov 22 04:27 pilot3
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc       532 Nov 22 11:50 boinc_task_state.xml
[2025-11-22 11:55:25] -rw------- 1 boinc boinc 931677409 Nov 22 11:53 HITS.47556137._001785.pool.root.1
[2025-11-22 11:55:25] -rw------- 1 boinc boinc        95 Nov 22 11:53 pilot_heartbeat.json
[2025-11-22 11:55:25] -rw------- 1 boinc boinc      1029 Nov 22 11:54 memory_monitor_summary.json
[2025-11-22 11:55:25] -rw------- 1 boinc boinc   1526164 Nov 22 11:54 agis_ddmendpoints.agis.ALL.json
[2025-11-22 11:55:25] -rw------- 1 boinc boinc   1263142 Nov 22 11:54 log.47556137._001785.job.log.tgz.1
[2025-11-22 11:55:25] -rw------- 1 boinc boinc      8567 Nov 22 11:54 heartbeat.json
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc      8192 Nov 22 11:55 boinc_mmap_file
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc        29 Nov 22 11:55 wrapper_checkpoint.txt
[2025-11-22 11:55:25] -rw------- 1 boinc boinc      4684 Nov 22 11:55 pilotlog.txt
[2025-11-22 11:55:25] -rw------- 1 boinc boinc   3732737 Nov 22 11:55 log.47556137._001785.job.log.1
[2025-11-22 11:55:25] -rw------- 1 boinc boinc       353 Nov 22 11:55 output.list
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc       620 Nov 22 11:55 runtime_log
[2025-11-22 11:55:25] -rw------- 1 boinc boinc   5017600 Nov 22 11:55 result.tar.gz
[2025-11-22 11:55:25] -rw------- 1 boinc boinc       651 Nov 22 11:55 wKlKDmb5pg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnnJKDmUgnoEn.diag
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc      8720 Nov 22 11:55 runtime_log.err
[2025-11-22 11:55:25] -rw-r--r-- 1 boinc boinc     21299 Nov 22 11:55 stderr.txt
[2025-11-22 11:55:25] HITS file was successfully produced:
[2025-11-22 11:55:25] -rw------- 1 boinc boinc 931677409 Nov 22 11:53 shared/HITS.pool.root.1
[2025-11-22 11:55:25]  *** Contents of shared directory: ***
[2025-11-22 11:55:25] total 1314188
[2025-11-22 11:55:25] -rw-r--r-- 2 boinc boinc 408410595 Nov 22 04:27 ATLAS.root_0
[2025-11-22 11:55:25] -rw-r--r-- 2 boinc boinc    590100 Nov 22 04:27 input.tar.gz
[2025-11-22 11:55:25] -rw-r--r-- 2 boinc boinc     15847 Nov 22 04:27 start_atlas.sh
[2025-11-22 11:55:25] -rw------- 1 boinc boinc 931677409 Nov 22 11:53 HITS.pool.root.1
[2025-11-22 11:55:25] -rw------- 1 boinc boinc   5017600 Nov 22 11:55 result.tar.gz
11:55:27 (995408): run_atlas exited; CPU time 106352.796634
11:55:27 (995408): called boinc_finish(0)

</stderr_txt>
]]>

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