Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:34:55 (10102): wrapper (7.7.26015): starting
00:34:55 (10102): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:34:55] Arguments: --nthreads 8
[2025-11-25 00:34:55] Threads: 8
[2025-11-25 00:34:55] Checking for CVMFS
[2025-11-25 00:34:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:34:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:34:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:34:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:34:58] 2.11.2.0 23762 283176 139380 153263 0 84 16700709 25165825 1060 130560 12 130074917 99.865 87857069 2998 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 00:34:58] CVMFS is ok
[2025-11-25 00:34:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:34:58] Checking for apptainer binary...
[2025-11-25 00:34:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:34:58] Running /usr/bin/apptainer --version
[2025-11-25 00:34:58] apptainer version 1.3.2-1.el7
[2025-11-25 00:34:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:35:22] cg-vwn242.simple-grid.lan
[2025-11-25 00:35:22] apptainer works
[2025-11-25 00:35:22] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:35:22] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:35:22] Starting ATLAS job with PandaID=6895323803
[2025-11-25 00:35:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:49:42]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:49:42] 2025-11-25 22:48:49,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:49:42] 2025-11-25 22:48:51,076 | INFO     | time since job start (83325s) is within the limit (172800.0s)
[2025-11-25 23:49:42] 2025-11-25 22:48:51,904 | INFO     | monitor loop #5634: job 0:6895323803 is in state 'finished'
[2025-11-25 23:49:42] 2025-11-25 22:48:51,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:49:42] 2025-11-25 22:48:53,085 | INFO     | time since job start (83327s) is within the limit (172800.0s)
[2025-11-25 23:49:42] 2025-11-25 22:48:54,253 | INFO     | PID=13829 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 23:49:42] 2025-11-25 22:48:54,253 | INFO     | .. there are 2 such processes running
[2025-11-25 23:49:42] 2025-11-25 22:48:54,409 | INFO     | monitor loop #5635: job 0:6895323803 is in state 'finished'
[2025-11-25 23:49:42] 2025-11-25 22:48:54,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:49:42] 2025-11-25 22:48:55,254 | INFO     | time since job start (83329s) is within the limit (172800.0s)
[2025-11-25 23:49:42] 2025-11-25 22:48:56,918 | INFO     | monitor loop #5636: job 0:6895323803 is in state 'finished'
[2025-11-25 23:49:42] 2025-11-25 22:48:56,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:49:42] 2025-11-25 22:48:57,262 | INFO     | time since job start (83331s) is within the limit (172800.0s)
[2025-11-25 23:49:42] 2025-11-25 22:48:59,270 | INFO     | time since job start (83333s) is within the limit (172800.0s)
[2025-11-25 23:49:42] 2025-11-25 22:48:59,434 | INFO     | monitor loop #5637: job 0:6895323803 is in state 'finished'
[2025-11-25 23:49:42] 2025-11-25 22:48:59,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:49:42] 2025-11-25 22:48:59,643 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 23:49:42] 2025-11-25 22:48:59,644 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 23:49:42] 2025-11-25 22:48:59,646 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6895323803/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:49:42] 2025-11-25 22:48:59,647 | INFO     | extracted standard info from prmon json
[2025-11-25 23:49:42] 2025-11-25 22:48:59,647 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:49:42] 2025-11-25 22:48:59,647 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:49:42] 2025-11-25 22:48:59,677 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:49:42] 2025-11-25 22:48:59,680 | INFO     | sum of square deviations: 771430823443.9849
[2025-11-25 23:49:42] 2025-11-25 22:48:59,733 | INFO     | sum of deviations: 2550132369015.9575
[2025-11-25 23:49:42] 2025-11-25 22:48:59,733 | INFO     | mean x: 1764069471.1512916
[2025-11-25 23:49:42] 2025-11-25 22:48:59,734 | INFO     | mean y: 2807161.9660516605
[2025-11-25 23:49:42] 2025-11-25 22:48:59,734 | INFO     | intersect: -5828708150.6994705
[2025-11-25 23:49:42] 2025-11-25 22:48:59,736 | INFO     | chi2: 36.765442070186445
[2025-11-25 23:49:42] 2025-11-25 22:48:59,738 | INFO     | sum of square deviations: 762922962964.8339
[2025-11-25 23:49:42] 2025-11-25 22:48:59,791 | INFO     | sum of deviations: 2989981846364.1235
[2025-11-25 23:49:42] 2025-11-25 22:48:59,791 | INFO     | mean x: 1764069318.6555555
[2025-11-25 23:49:42] 2025-11-25 22:48:59,791 | INFO     | mean y: 2815044.763703704
[2025-11-25 23:49:42] 2025-11-25 22:48:59,792 | INFO     | intersect: -6910773213.230785
[2025-11-25 23:49:42] 2025-11-25 22:48:59,793 | INFO     | chi2: 33.497231117315415
[2025-11-25 23:49:42] 2025-11-25 22:48:59,794 | INFO     | current chi2=33.497231117315415 (change=8.889355788601446 %)
[2025-11-25 23:49:42] 2025-11-25 22:48:59,794 | INFO     | right removable region: 1349
[2025-11-25 23:49:42] 2025-11-25 22:48:59,796 | INFO     | sum of square deviations: 762922011364.8335
[2025-11-25 23:49:42] 2025-11-25 22:48:59,849 | INFO     | sum of deviations: 1984107152882.9846
[2025-11-25 23:49:42] 2025-11-25 22:48:59,849 | INFO     | mean x: 1764069623.6555555
[2025-11-25 23:49:42] 2025-11-25 22:48:59,849 | INFO     | mean y: 2817306.3762962963
[2025-11-25 23:49:42] 2025-11-25 22:48:59,850 | INFO     | intersect: -4584942787.498901
[2025-11-25 23:49:42] 2025-11-25 22:48:59,851 | INFO     | chi2: 31.912459531209915
[2025-11-25 23:49:42] 2025-11-25 22:48:59,852 | INFO     | current chi2=31.912459531209915 (change=13.199848188176347 %)
[2025-11-25 23:49:42] 2025-11-25 22:48:59,852 | INFO     | left removable region: 10
[2025-11-25 23:49:42] 2025-11-25 22:48:59,854 | INFO     | sum of square deviations: 744424466662.5262
[2025-11-25 23:49:42] 2025-11-25 22:48:59,905 | INFO     | sum of deviations: 2006791182807.991
[2025-11-25 23:49:42] 2025-11-25 22:48:59,906 | INFO     | mean x: 1764069593.1650486
[2025-11-25 23:49:42] 2025-11-25 22:48:59,906 | INFO     | mean y: 2836357.4570575054
[2025-11-25 23:49:42] 2025-11-25 22:48:59,906 | INFO     | intersect: -4752675402.244628
[2025-11-25 23:49:42] 2025-11-25 22:48:59,908 | INFO     | chi2: 23.93600181107555
[2025-11-25 23:49:42] 2025-11-25 22:48:59,908 | INFO     | current memory leak: 2.70 B/s (using 1339 data points, chi2=23.94)
[2025-11-25 23:49:42] 2025-11-25 22:48:59,911 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-25 23:49:42] 2025-11-25 22:48:59,911 | INFO     | ..............................
[2025-11-25 23:49:42] 2025-11-25 22:48:59,911 | INFO     | . Timing measurements:
[2025-11-25 23:49:42] 2025-11-25 22:48:59,911 | INFO     | . get job = 0 s
[2025-11-25 23:49:42] 2025-11-25 22:48:59,911 | INFO     | . initial setup = 7 s
[2025-11-25 23:49:42] 2025-11-25 22:48:59,912 | INFO     | . payload setup = 181 s
[2025-11-25 23:49:42] 2025-11-25 22:48:59,912 | INFO     | . stage-in = 0 s
[2025-11-25 23:49:42] 2025-11-25 22:48:59,912 | INFO     | . payload execution = 82818 s
[2025-11-25 23:49:42] 2025-11-25 22:48:59,912 | INFO     | . stage-out = 5 s
[2025-11-25 23:49:42] 2025-11-25 22:48:59,912 | INFO     | . log creation = 2 s
[2025-11-25 23:49:42] 2025-11-25 22:48:59,912 | INFO     | ..............................
[2025-11-25 23:49:42] 2025-11-25 22:49:00,056 | INFO     | 
[2025-11-25 23:49:42] 2025-11-25 22:49:00,056 | INFO     | job summary report
[2025-11-25 23:49:42] 2025-11-25 22:49:00,057 | INFO     | --------------------------------------------------
[2025-11-25 23:49:42] 2025-11-25 22:49:00,057 | INFO     | PanDA job id: 6895323803
[2025-11-25 23:49:42] 2025-11-25 22:49:00,057 | INFO     | task id: 47556137
[2025-11-25 23:49:42] 2025-11-25 22:49:00,057 | INFO     | errors: (none)
[2025-11-25 23:49:42] 2025-11-25 22:49:00,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:49:42] 2025-11-25 22:49:00,057 | INFO     | pilot state: finished 
[2025-11-25 23:49:42] 2025-11-25 22:49:00,057 | INFO     | transexitcode: 0
[2025-11-25 23:49:42] 2025-11-25 22:49:00,057 | INFO     | exeerrorcode: 0
[2025-11-25 23:49:42] 2025-11-25 22:49:00,057 | INFO     | exeerrordiag: 
[2025-11-25 23:49:42] 2025-11-25 22:49:00,058 | INFO     | exitcode: 0
[2025-11-25 23:49:42] 2025-11-25 22:49:00,058 | INFO     | exitmsg: OK
[2025-11-25 23:49:42] 2025-11-25 22:49:00,058 | INFO     | cpuconsumptiontime: 337934 s
[2025-11-25 23:49:42] 2025-11-25 22:49:00,058 | INFO     | nevents: 1000
[2025-11-25 23:49:42] 2025-11-25 22:49:00,058 | INFO     | neventsw: 0
[2025-11-25 23:49:42] 2025-11-25 22:49:00,058 | INFO     | pid: 20317
[2025-11-25 23:49:42] 2025-11-25 22:49:00,058 | INFO     | pgrp: 20317
[2025-11-25 23:49:42] 2025-11-25 22:49:00,058 | INFO     | corecount: 8
[2025-11-25 23:49:42] 2025-11-25 22:49:00,058 | INFO     | event service: False
[2025-11-25 23:49:42] 2025-11-25 22:49:00,059 | INFO     | sizes: {0: 2284079, 1: 2284334, 12: 2284334, 23: 2284362, 33: 2284390, 44: 2284446, 55: 2284602, 66: 2284630, 76: 2284658, 87: 2284714, 98: 2284742, 101: 2285312, 
[2025-11-25 23:49:42] 2025-11-25 22:49:00,059 | INFO     | --------------------------------------------------
[2025-11-25 23:49:42] 2025-11-25 22:49:00,059 | INFO     | 
[2025-11-25 23:49:42] 2025-11-25 22:49:00,059 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-25 23:49:42] 2025-11-25 22:49:00,617 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,618 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,618 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,620 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:49:42] 2025-11-25 22:49:00,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,620 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:49:42] 2025-11-25 22:49:00,620 | INFO     | job 6895323803 has completed (purged errors)
[2025-11-25 23:49:42] 2025-11-25 22:49:00,620 | INFO     | overall cleanup function is called
[2025-11-25 23:49:42] 2025-11-25 22:49:01,638 | INFO     | --- collectZombieJob: --- 10, [20317]
[2025-11-25 23:49:42] 2025-11-25 22:49:01,638 | INFO     | zombie collector waiting for pid 20317
[2025-11-25 23:49:42] 2025-11-25 22:49:01,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:49:42] 2025-11-25 22:49:01,639 | INFO     | collected zombie processes
[2025-11-25 23:49:42] 2025-11-25 22:49:01,639 | INFO     | will attempt to kill all subprocesses of pid=20317
[2025-11-25 23:49:42] 2025-11-25 22:49:01,731 | INFO     | process IDs to be killed: [20317] (in reverse order)
[2025-11-25 23:49:42] 2025-11-25 22:49:02,196 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:49:42] 2025-11-25 22:49:02,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:49:42] 2025-11-25 22:49:02,199 | INFO     | did not find any defunct processes belonging to 20317
[2025-11-25 23:49:42] 2025-11-25 22:49:02,201 | INFO     | did not find any defunct processes belonging to 20317
[2025-11-25 23:49:42] 2025-11-25 22:49:02,230 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:49:42] 2025-11-25 22:49:02,231 | INFO     | ready for new job
[2025-11-25 23:49:42] 2025-11-25 22:49:02,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:49:42] 2025-11-25 22:49:02,237 | INFO     | ***************************************
[2025-11-25 23:49:42] 2025-11-25 22:49:02,238 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:49:42] 2025-11-25 22:49:02,238 | INFO     | ***************************************
[2025-11-25 23:49:42] 2025-11-25 22:49:02,238 | INFO     | 
[2025-11-25 23:49:42] 2025-11-25 22:49:02,239 | INFO     | pilot is running in a VM
[2025-11-25 23:49:42] 2025-11-25 22:49:02,239 | INFO     | architecture information:
[2025-11-25 23:49:42] 2025-11-25 22:49:02,244 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:49:42] 2025-11-25 22:49:02,473 | INFO     | cat /etc/os-release:
[2025-11-25 23:49:42] NAME="CentOS Linux"
[2025-11-25 23:49:42] VERSION="7 (Core)"
[2025-11-25 23:49:42] ID="centos"
[2025-11-25 23:49:42] ID_LIKE="rhel fedora"
[2025-11-25 23:49:42] VERSION_ID="7"
[2025-11-25 23:49:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:49:42] ANSI_COLOR="0;31"
[2025-11-25 23:49:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:49:42] HOME_URL="https://www.centos.org/"
[2025-11-25 23:49:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:49:42] 
[2025-11-25 23:49:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:49:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:49:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:49:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:49:42] 
[2025-11-25 23:49:42] 2025-11-25 22:49:02,473 | INFO     | ***************************************
[2025-11-25 23:49:42] 2025-11-25 22:49:02,976 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-25 23:49:42] 2025-11-25 22:49:03,172 | INFO     | sufficient remaining disk space (495786655744 B)
[2025-11-25 23:49:42] 2025-11-25 22:49:03,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:49:42] 2025-11-25 22:49:03,173 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:49:42] 2025-11-25 22:49:03,173 | INFO     | update_server=False
[2025-11-25 23:49:42] 2025-11-25 22:49:03,173 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:49:42] 2025-11-25 22:49:03,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:49:42] 2025-11-25 22:49:03,174 | INFO     | aborting loop
[2025-11-25 23:49:42] 2025-11-25 22:49:03,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:49:42] 2025-11-25 22:49:03,314 | INFO     | all payload control threads have been joined
[2025-11-25 23:49:42] 2025-11-25 22:49:03,427 | INFO     | all job control threads have been joined
[2025-11-25 23:49:42] 2025-11-25 22:49:03,880 | INFO     | all data control threads have been joined
[2025-11-25 23:49:42] 2025-11-25 22:49:04,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:49:42] 2025-11-25 22:49:04,179 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:04,180 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:04,286 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:04,320 | INFO     | [payload] control thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:04,433 | INFO     | [job] control thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:04,647 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:04,712 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:04,777 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:04,886 | INFO     | [data] control thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:05,023 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:05,029 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:05,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:49:42] 2025-11-25 22:49:05,079 | INFO     | [job] validate thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:05,510 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:06,077 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:06,086 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:07,184 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:49:42] 2025-11-25 22:49:31,493 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:49:42] 2025-11-25 22:49:32,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760805304128)>', '<ExcThread(monitor, started 139760349722368)>']
[2025-11-25 23:49:42] 2025-11-25 22:49:32,400 | INFO     | PID=13829 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 23:49:42] 2025-11-25 22:49:32,401 | INFO     | .. there are 2 such processes running
[2025-11-25 23:49:42] 2025-11-25 22:49:32,401 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:49:42] 2025-11-25 22:49:32,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:49:42] 2025-11-25 22:49:32,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:49:42] 2025-11-25 22:49:32,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:49:42] 2025-11-25 22:49:32,402 | INFO     | [monitor] control thread has ended
[2025-11-25 23:49:42] 2025-11-25 22:49:37,240 | INFO     | all workflow threads have been joined
[2025-11-25 23:49:42] 2025-11-25 22:49:37,240 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:49:42] 2025-11-25 22:49:37,241 | INFO     | traces error code: 0
[2025-11-25 23:49:42] 2025-11-25 22:49:37,241 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:49:42] 2025-11-25 22:49:37,655 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:49:42] 2025-11-25 22:49:37,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:49:42] 2025-11-25 22:49:37,809 [wrapper] pilotpid: 13829
[2025-11-25 23:49:42] 2025-11-25 22:49:37,930 [wrapper] Pilot exit status: 0
[2025-11-25 23:49:42] 2025-11-25 22:49:38,328 [wrapper] pandaids: 6895323803
[2025-11-25 23:49:42] 2025-11-25 22:49:39,222 [wrapper] cleanup supervisor_pilot  7425 13830
[2025-11-25 23:49:42] 2025-11-25 22:49:39,346 [wrapper] Test setup, not cleaning
[2025-11-25 23:49:42] 2025-11-25 22:49:39,438 [wrapper] apfmon messages muted
[2025-11-25 23:49:42] 2025-11-25 22:49:39,559 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:49:42] 2025-11-25 22:49:39,658 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:49:42]  *** Error codes and diagnostics ***
[2025-11-25 23:49:42]     "exeErrorCode": 0,
[2025-11-25 23:49:42]     "exeErrorDiag": "",
[2025-11-25 23:49:42]     "pilotErrorCode": 0,
[2025-11-25 23:49:42]     "pilotErrorDiag": "",
[2025-11-25 23:49:42]  *** Listing of results directory ***
[2025-11-25 23:49:42] total 1324296
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc    576529 Nov 21 14:51 pilot3.tar.gz
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc      5112 Nov 21 15:02 queuedata.json
[2025-11-25 23:49:42] -rwx------. 1 boinc boinc     36292 Nov 21 15:05 runpilot2-wrapper.sh
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc       100 Nov 25 00:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:49:42] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 00:34 run_atlas
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc       105 Nov 25 00:34 job.xml
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc      6393 Nov 25 00:34 init_data.xml
[2025-11-25 23:49:42] -rw-r--r--. 2 boinc boinc 410662032 Nov 25 00:34 EVNT.47483658._000012.pool.root.1
[2025-11-25 23:49:42] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:34 start_atlas.sh
[2025-11-25 23:49:42] drwxrwx--x. 2 boinc boinc        68 Nov 25 00:34 shared
[2025-11-25 23:49:42] -rw-r--r--. 2 boinc boinc    590100 Nov 25 00:34 input.tar.gz
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc         0 Nov 25 00:34 boinc_lockfile
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc      2784 Nov 25 00:35 pandaJob.out
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc    991801 Nov 25 00:40 agis_schedconf.cvmfs.json
[2025-11-25 23:49:42] drwx------. 5 boinc boinc      4096 Nov 25 00:40 pilot3
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc       533 Nov 25 23:13 boinc_task_state.xml
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc 914228300 Nov 25 23:45 HITS.47556137._000112.pool.root.1
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc      1035 Nov 25 23:47 memory_monitor_summary.json
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc   1516240 Nov 25 23:47 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc   2463023 Nov 25 23:47 log.47556137._000112.job.log.tgz.1
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc        95 Nov 25 23:48 pilot_heartbeat.json
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc      8624 Nov 25 23:48 heartbeat.json
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc      8192 Nov 25 23:49 boinc_mmap_file
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc        29 Nov 25 23:49 wrapper_checkpoint.txt
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc      4884 Nov 25 23:49 pilotlog.txt
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc  11178581 Nov 25 23:49 log.47556137._000112.job.log.1
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc       353 Nov 25 23:49 output.list
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc       620 Nov 25 23:49 runtime_log
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc  13660160 Nov 25 23:49 result.tar.gz
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc      8817 Nov 25 23:49 runtime_log.err
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc       662 Nov 25 23:49 C8PMDmHwgg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHeHKDmZWayPo.diag
[2025-11-25 23:49:42] -rw-r--r--. 1 boinc boinc     21527 Nov 25 23:49 stderr.txt
[2025-11-25 23:49:42] HITS file was successfully produced:
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc 914228300 Nov 25 23:45 shared/HITS.pool.root.1
[2025-11-25 23:49:42]  *** Contents of shared directory: ***
[2025-11-25 23:49:42] total 1307780
[2025-11-25 23:49:42] -rw-r--r--. 2 boinc boinc 410662032 Nov 25 00:34 ATLAS.root_0
[2025-11-25 23:49:42] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:34 start_atlas.sh
[2025-11-25 23:49:42] -rw-r--r--. 2 boinc boinc    590100 Nov 25 00:34 input.tar.gz
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc 914228300 Nov 25 23:45 HITS.pool.root.1
[2025-11-25 23:49:42] -rw-------. 1 boinc boinc  13660160 Nov 25 23:49 result.tar.gz
23:49:43 (10102): run_atlas exited; CPU time 338081.680705
23:49:43 (10102): called boinc_finish(0)

</stderr_txt>
]]>

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