Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:03:07 (29864): wrapper (7.7.26015): starting
02:03:07 (29864): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 02:03:07] Arguments: --nthreads 8
[2025-11-25 02:03:07] Threads: 8
[2025-11-25 02:03:07] Checking for CVMFS
[2025-11-25 02:03:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:03:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:03:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:03:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:03:08] 2.11.2.0 22643 144151 133700 153264 2 143 23124092 25165825 94 130560 9 44177122 99.863 27313206 1907 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 02:03:08] CVMFS is ok
[2025-11-25 02:03:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:03:08] Checking for apptainer binary...
[2025-11-25 02:03:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 02:03:08] Running /usr/bin/apptainer --version
[2025-11-25 02:03:08] apptainer version 1.3.2-1.el7
[2025-11-25 02:03:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:03:09] cg-vwn227.simple-grid.lan
[2025-11-25 02:03:09] apptainer works
[2025-11-25 02:03:09] Set ATHENA_PROC_NUMBER=8
[2025-11-25 02:03:09] Set ATHENA_CORE_NUMBER=8
[2025-11-25 02:03:09] Starting ATLAS job with PandaID=6894268430
[2025-11-25 02:03:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 03:04:33]  *** The last 200 lines of the pilot log: ***
[2025-11-26 03:04:33] 2025-11-26 02:03:43,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:04:33] 2025-11-26 02:03:44,495 | INFO     | time since job start (90016s) is within the limit (172800.0s)
[2025-11-26 03:04:33] 2025-11-26 02:03:46,389 | INFO     | monitor loop #5981: job 0:6894268430 is in state 'finished'
[2025-11-26 03:04:33] 2025-11-26 02:03:46,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:04:33] 2025-11-26 02:03:46,502 | INFO     | time since job start (90018s) is within the limit (172800.0s)
[2025-11-26 03:04:33] 2025-11-26 02:03:48,508 | INFO     | time since job start (90020s) is within the limit (172800.0s)
[2025-11-26 03:04:33] 2025-11-26 02:03:48,893 | INFO     | monitor loop #5982: job 0:6894268430 is in state 'finished'
[2025-11-26 03:04:33] 2025-11-26 02:03:48,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:04:33] 2025-11-26 02:03:50,517 | INFO     | time since job start (90022s) is within the limit (172800.0s)
[2025-11-26 03:04:33] 2025-11-26 02:03:51,401 | INFO     | monitor loop #5983: job 0:6894268430 is in state 'finished'
[2025-11-26 03:04:33] 2025-11-26 02:03:51,402 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:04:33] 2025-11-26 02:03:52,524 | INFO     | time since job start (90024s) is within the limit (172800.0s)
[2025-11-26 03:04:33] 2025-11-26 02:03:53,906 | INFO     | monitor loop #5984: job 0:6894268430 is in state 'finished'
[2025-11-26 03:04:33] 2025-11-26 02:03:53,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:04:33] 2025-11-26 02:03:54,531 | INFO     | time since job start (90026s) is within the limit (172800.0s)
[2025-11-26 03:04:33] 2025-11-26 02:03:55,655 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 03:04:33] 2025-11-26 02:03:55,656 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 03:04:33] 2025-11-26 02:03:55,657 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6894268430/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 03:04:33] 2025-11-26 02:03:55,658 | INFO     | extracted standard info from prmon json
[2025-11-26 03:04:33] 2025-11-26 02:03:55,658 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 03:04:33] 2025-11-26 02:03:55,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 03:04:33] 2025-11-26 02:03:55,685 | INFO     | fitting pss+swap vs Time
[2025-11-26 03:04:33] 2025-11-26 02:03:55,688 | INFO     | sum of square deviations: 993048272752.718
[2025-11-26 03:04:33] 2025-11-26 02:03:55,764 | INFO     | sum of deviations: 2151115004695.5967
[2025-11-26 03:04:33] 2025-11-26 02:03:55,764 | INFO     | mean x: 1764077574.8208954
[2025-11-26 03:04:33] 2025-11-26 02:03:55,764 | INFO     | mean y: 2859546.1234735413
[2025-11-26 03:04:33] 2025-11-26 02:03:55,765 | INFO     | intersect: -3818438818.481995
[2025-11-26 03:04:33] 2025-11-26 02:03:55,767 | INFO     | chi2: 16.96163977298411
[2025-11-26 03:04:33] 2025-11-26 02:03:55,769 | INFO     | sum of square deviations: 982977449836.4628
[2025-11-26 03:04:33] 2025-11-26 02:03:55,833 | INFO     | sum of deviations: 2646057536424.4595
[2025-11-26 03:04:33] 2025-11-26 02:03:55,834 | INFO     | mean x: 1764077422.3253915
[2025-11-26 03:04:33] 2025-11-26 02:03:55,834 | INFO     | mean y: 2867040.2396187885
[2025-11-26 03:04:33] 2025-11-26 02:03:55,834 | INFO     | intersect: -4745818048.067263
[2025-11-26 03:04:33] 2025-11-26 02:03:55,836 | INFO     | chi2: 13.643286277561408
[2025-11-26 03:04:33] 2025-11-26 02:03:55,836 | INFO     | current chi2=13.643286277561408 (change=19.56387200669157 %)
[2025-11-26 03:04:33] 2025-11-26 02:03:55,836 | INFO     | right removable region: 1468
[2025-11-26 03:04:33] 2025-11-26 02:03:55,838 | INFO     | sum of square deviations: 982976262166.4634
[2025-11-26 03:04:33] 2025-11-26 02:03:55,901 | INFO     | sum of deviations: 1712699119736.113
[2025-11-26 03:04:33] 2025-11-26 02:03:55,902 | INFO     | mean x: 1764077727.3253915
[2025-11-26 03:04:33] 2025-11-26 02:03:55,902 | INFO     | mean y: 2866181.1524846833
[2025-11-26 03:04:33] 2025-11-26 02:03:55,902 | INFO     | intersect: -3070793363.8677683
[2025-11-26 03:04:33] 2025-11-26 02:03:55,904 | INFO     | chi2: 14.629205128699436
[2025-11-26 03:04:33] 2025-11-26 02:03:55,904 | INFO     | current chi2=14.629205128699436 (change=13.75123322687051 %)
[2025-11-26 03:04:33] 2025-11-26 02:03:55,904 | INFO     | left removable region: 10
[2025-11-26 03:04:33] 2025-11-26 02:03:55,906 | INFO     | sum of square deviations: 961059804411.1654
[2025-11-26 03:04:33] 2025-11-26 02:03:55,968 | INFO     | sum of deviations: 2229964630697.1655
[2025-11-26 03:04:33] 2025-11-26 02:03:55,969 | INFO     | mean x: 1764077696.8326476
[2025-11-26 03:04:33] 2025-11-26 02:03:55,969 | INFO     | mean y: 2876823.496570645
[2025-11-26 03:04:33] 2025-11-26 02:03:55,969 | INFO     | intersect: -4090344900.7734933
[2025-11-26 03:04:33] 2025-11-26 02:03:55,971 | INFO     | chi2: 10.425512031130792
[2025-11-26 03:04:33] 2025-11-26 02:03:55,971 | INFO     | current memory leak: 2.32 B/s (using 1458 data points, chi2=10.43)
[2025-11-26 03:04:33] 2025-11-26 02:03:55,972 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-26 03:04:33] 2025-11-26 02:03:55,972 | INFO     | ..............................
[2025-11-26 03:04:33] 2025-11-26 02:03:55,973 | INFO     | . Timing measurements:
[2025-11-26 03:04:33] 2025-11-26 02:03:55,973 | INFO     | . get job = 0 s
[2025-11-26 03:04:33] 2025-11-26 02:03:55,973 | INFO     | . initial setup = 2 s
[2025-11-26 03:04:33] 2025-11-26 02:03:55,973 | INFO     | . payload setup = 10 s
[2025-11-26 03:04:33] 2025-11-26 02:03:55,973 | INFO     | . stage-in = 0 s
[2025-11-26 03:04:33] 2025-11-26 02:03:55,973 | INFO     | . payload execution = 89893 s
[2025-11-26 03:04:33] 2025-11-26 02:03:55,973 | INFO     | . stage-out = 5 s
[2025-11-26 03:04:33] 2025-11-26 02:03:55,973 | INFO     | . log creation = 2 s
[2025-11-26 03:04:33] 2025-11-26 02:03:55,973 | INFO     | ..............................
[2025-11-26 03:04:33] 2025-11-26 02:03:56,099 | INFO     | 
[2025-11-26 03:04:33] 2025-11-26 02:03:56,100 | INFO     | job summary report
[2025-11-26 03:04:33] 2025-11-26 02:03:56,100 | INFO     | --------------------------------------------------
[2025-11-26 03:04:33] 2025-11-26 02:03:56,100 | INFO     | PanDA job id: 6894268430
[2025-11-26 03:04:33] 2025-11-26 02:03:56,100 | INFO     | task id: 47533967
[2025-11-26 03:04:33] 2025-11-26 02:03:56,100 | INFO     | errors: (none)
[2025-11-26 03:04:33] 2025-11-26 02:03:56,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 03:04:33] 2025-11-26 02:03:56,100 | INFO     | pilot state: finished 
[2025-11-26 03:04:33] 2025-11-26 02:03:56,100 | INFO     | transexitcode: 0
[2025-11-26 03:04:33] 2025-11-26 02:03:56,100 | INFO     | exeerrorcode: 0
[2025-11-26 03:04:33] 2025-11-26 02:03:56,101 | INFO     | exeerrordiag: 
[2025-11-26 03:04:33] 2025-11-26 02:03:56,101 | INFO     | exitcode: 0
[2025-11-26 03:04:33] 2025-11-26 02:03:56,101 | INFO     | exitmsg: OK
[2025-11-26 03:04:33] 2025-11-26 02:03:56,101 | INFO     | cpuconsumptiontime: 340342 s
[2025-11-26 03:04:33] 2025-11-26 02:03:56,101 | INFO     | nevents: 1000
[2025-11-26 03:04:33] 2025-11-26 02:03:56,101 | INFO     | neventsw: 0
[2025-11-26 03:04:33] 2025-11-26 02:03:56,101 | INFO     | pid: 7652
[2025-11-26 03:04:33] 2025-11-26 02:03:56,101 | INFO     | pgrp: 7652
[2025-11-26 03:04:33] 2025-11-26 02:03:56,101 | INFO     | corecount: 8
[2025-11-26 03:04:33] 2025-11-26 02:03:56,102 | INFO     | event service: False
[2025-11-26 03:04:33] 2025-11-26 02:03:56,102 | INFO     | sizes: {0: 2283481, 1: 2284337, 2: 2284337, 8: 2284627, 12: 2284655, 89907: 2344507, 89914: 2353506, 89915: 2353562, 90009: 2353808}
[2025-11-26 03:04:33] 2025-11-26 02:03:56,102 | INFO     | --------------------------------------------------
[2025-11-26 03:04:33] 2025-11-26 02:03:56,102 | INFO     | 
[2025-11-26 03:04:33] 2025-11-26 02:03:56,102 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-26 03:04:33] 2025-11-26 02:03:56,538 | INFO     | time since job start (90028s) is within the limit (172800.0s)
[2025-11-26 03:04:33] 2025-11-26 02:03:56,676 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,676 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,676 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,676 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,678 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 03:04:33] 2025-11-26 02:03:56,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,678 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 03:04:33] 2025-11-26 02:03:56,678 | INFO     | job 6894268430 has completed (purged errors)
[2025-11-26 03:04:33] 2025-11-26 02:03:56,678 | INFO     | overall cleanup function is called
[2025-11-26 03:04:33] 2025-11-26 02:03:57,697 | INFO     | --- collectZombieJob: --- 10, [7652]
[2025-11-26 03:04:33] 2025-11-26 02:03:57,698 | INFO     | zombie collector waiting for pid 7652
[2025-11-26 03:04:33] 2025-11-26 02:03:57,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 03:04:33] 2025-11-26 02:03:57,698 | INFO     | collected zombie processes
[2025-11-26 03:04:33] 2025-11-26 02:03:57,698 | INFO     | will attempt to kill all subprocesses of pid=7652
[2025-11-26 03:04:33] 2025-11-26 02:03:57,810 | INFO     | process IDs to be killed: [7652] (in reverse order)
[2025-11-26 03:04:33] 2025-11-26 02:03:58,704 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 03:04:33] 2025-11-26 02:03:58,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 03:04:33] 2025-11-26 02:03:58,708 | INFO     | did not find any defunct processes belonging to 7652
[2025-11-26 03:04:33] 2025-11-26 02:03:58,710 | INFO     | did not find any defunct processes belonging to 7652
[2025-11-26 03:04:33] 2025-11-26 02:03:58,760 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 03:04:33] 2025-11-26 02:03:58,760 | INFO     | ready for new job
[2025-11-26 03:04:33] 2025-11-26 02:03:58,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 03:04:33] 2025-11-26 02:03:58,765 | INFO     | ***************************************
[2025-11-26 03:04:33] 2025-11-26 02:03:58,766 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 03:04:33] 2025-11-26 02:03:58,766 | INFO     | ***************************************
[2025-11-26 03:04:33] 2025-11-26 02:03:58,766 | INFO     | 
[2025-11-26 03:04:33] 2025-11-26 02:03:58,766 | INFO     | pilot is running in a VM
[2025-11-26 03:04:33] 2025-11-26 02:03:58,766 | INFO     | architecture information:
[2025-11-26 03:04:33] 2025-11-26 02:03:58,780 | INFO     | executing command: cat /etc/os-release
[2025-11-26 03:04:33] 2025-11-26 02:03:59,038 | INFO     | cat /etc/os-release:
[2025-11-26 03:04:33] NAME="CentOS Linux"
[2025-11-26 03:04:33] VERSION="7 (Core)"
[2025-11-26 03:04:33] ID="centos"
[2025-11-26 03:04:33] ID_LIKE="rhel fedora"
[2025-11-26 03:04:33] VERSION_ID="7"
[2025-11-26 03:04:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 03:04:33] ANSI_COLOR="0;31"
[2025-11-26 03:04:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 03:04:33] HOME_URL="https://www.centos.org/"
[2025-11-26 03:04:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 03:04:33] 
[2025-11-26 03:04:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 03:04:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 03:04:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 03:04:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 03:04:33] 
[2025-11-26 03:04:33] 2025-11-26 02:03:59,038 | INFO     | ***************************************
[2025-11-26 03:04:33] 2025-11-26 02:03:59,542 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-26 03:04:33] 2025-11-26 02:03:59,816 | INFO     | sufficient remaining disk space (495977496576 B)
[2025-11-26 03:04:33] 2025-11-26 02:03:59,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 03:04:33] 2025-11-26 02:03:59,817 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 03:04:33] 2025-11-26 02:03:59,817 | INFO     | update_server=False
[2025-11-26 03:04:33] 2025-11-26 02:03:59,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 03:04:33] 2025-11-26 02:03:59,817 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 03:04:33] 2025-11-26 02:03:59,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 03:04:33] 2025-11-26 02:03:59,864 | INFO     | all payload control threads have been joined
[2025-11-26 03:04:33] 2025-11-26 02:03:59,871 | INFO     | all job control threads have been joined
[2025-11-26 03:04:33] 2025-11-26 02:03:59,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:04:33] 2025-11-26 02:03:59,935 | INFO     | aborting loop
[2025-11-26 03:04:33] 2025-11-26 02:04:00,823 | INFO     | [job] retrieve thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:00,840 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:00,871 | INFO     | [payload] control thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:00,878 | INFO     | [job] control thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:00,913 | INFO     | all data control threads have been joined
[2025-11-26 03:04:33] 2025-11-26 02:04:00,940 | INFO     | [job] job monitor thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:01,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:04:33] 2025-11-26 02:04:01,576 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:01,798 | INFO     | [data] copytool_in thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:01,832 | INFO     | [data] copytool_out thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:01,905 | INFO     | [payload] validate_post thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:01,909 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:01,919 | INFO     | [data] control thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:01,944 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:02,019 | INFO     | [payload] failed_post thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:02,121 | INFO     | [job] queue monitor thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:02,125 | INFO     | [job] validate thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:03,826 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 03:04:33] 2025-11-26 02:04:05,897 | INFO     | [monitor] cgroup control has ended
[2025-11-26 03:04:33] 2025-11-26 02:04:06,607 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140331289417536)>', '<ExcThread(monitor, started 140330858960640)>']
[2025-11-26 03:04:33] 2025-11-26 02:04:11,633 | INFO     | all workflow threads have been joined
[2025-11-26 03:04:33] 2025-11-26 02:04:11,634 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 03:04:33] 2025-11-26 02:04:11,634 | INFO     | traces error code: 0
[2025-11-26 03:04:33] 2025-11-26 02:04:11,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 03:04:33] 2025-11-26 02:04:29,704 | INFO     | PID=1174 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 03:04:33] 2025-11-26 02:04:29,704 | INFO     | .. there are 9 such processes running
[2025-11-26 03:04:33] 2025-11-26 02:04:29,705 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 03:04:33] 2025-11-26 02:04:29,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 03:04:33] 2025-11-26 02:04:29,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 03:04:33] 2025-11-26 02:04:29,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 03:04:33] 2025-11-26 02:04:29,705 | INFO     | [monitor] control thread has ended
[2025-11-26 03:04:33] 2025-11-26 02:04:30,045 [wrapper] ==== pilot stdout END ====
[2025-11-26 03:04:33] 2025-11-26 02:04:30,177 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 03:04:33] 2025-11-26 02:04:30,228 [wrapper] pilotpid: 1174
[2025-11-26 03:04:33] 2025-11-26 02:04:30,284 [wrapper] Pilot exit status: 0
[2025-11-26 03:04:33] 2025-11-26 02:04:30,607 [wrapper] pandaids: 6894268430
[2025-11-26 03:04:33] 2025-11-26 02:04:31,313 [wrapper] cleanup supervisor_pilot   491 1175
[2025-11-26 03:04:33] 2025-11-26 02:04:31,386 [wrapper] Test setup, not cleaning
[2025-11-26 03:04:33] 2025-11-26 02:04:31,455 [wrapper] apfmon messages muted
[2025-11-26 03:04:33] 2025-11-26 02:04:31,514 [wrapper] ==== wrapper stdout END ====
[2025-11-26 03:04:33] 2025-11-26 02:04:31,583 [wrapper] ==== wrapper stderr END ====
[2025-11-26 03:04:33]  *** Error codes and diagnostics ***
[2025-11-26 03:04:33]     "exeErrorCode": 0,
[2025-11-26 03:04:33]     "exeErrorDiag": "",
[2025-11-26 03:04:33]     "pilotErrorCode": 0,
[2025-11-26 03:04:33]     "pilotErrorDiag": "",
[2025-11-26 03:04:33]  *** Listing of results directory ***
[2025-11-26 03:04:33] total 1328556
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc      5112 Nov 21 06:46 queuedata.json
[2025-11-26 03:04:33] -rwx------. 1 boinc boinc     36292 Nov 21 06:47 runpilot2-wrapper.sh
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc       100 Nov 25 02:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 03:04:33] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 02:03 run_atlas
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc       105 Nov 25 02:03 job.xml
[2025-11-26 03:04:33] -rw-r--r--. 2 boinc boinc 407855003 Nov 25 02:03 EVNT.47493127._002265.pool.root.1
[2025-11-26 03:04:33] -rw-r--r--. 2 boinc boinc    590112 Nov 25 02:03 input.tar.gz
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc      6392 Nov 25 02:03 init_data.xml
[2025-11-26 03:04:33] -rw-r--r--. 2 boinc boinc     15847 Nov 25 02:03 start_atlas.sh
[2025-11-26 03:04:33] drwxrwx--x. 2 boinc boinc        68 Nov 25 02:03 shared
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc         0 Nov 25 02:03 boinc_lockfile
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc      2785 Nov 25 02:03 pandaJob.out
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc    991801 Nov 25 02:03 agis_schedconf.cvmfs.json
[2025-11-26 03:04:33] drwx------. 5 boinc boinc      4096 Nov 25 02:03 pilot3
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc       533 Nov 26 02:37 boinc_task_state.xml
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc 919776548 Nov 26 03:00 HITS.47533967._002364.pool.root.1
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc      1033 Nov 26 03:02 memory_monitor_summary.json
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc   1516240 Nov 26 03:02 agis_ddmendpoints.agis.ALL.json
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc   2526579 Nov 26 03:02 log.47533967._002364.job.log.tgz.1
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc      7262 Nov 26 03:03 heartbeat.json
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc        95 Nov 26 03:04 pilot_heartbeat.json
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc       819 Nov 26 03:04 pilotlog.txt
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc        29 Nov 26 03:04 wrapper_checkpoint.txt
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc      8192 Nov 26 03:04 boinc_mmap_file
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc  11934484 Nov 26 03:04 log.47533967._002364.job.log.1
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc       353 Nov 26 03:04 output.list
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc       620 Nov 26 03:04 runtime_log
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc  14479360 Nov 26 03:04 result.tar.gz
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc       662 Nov 26 03:04 YfQNDmLAZg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9NHKDmhYDcFo.diag
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc      8817 Nov 26 03:04 runtime_log.err
[2025-11-26 03:04:33] -rw-r--r--. 1 boinc boinc     21403 Nov 26 03:04 stderr.txt
[2025-11-26 03:04:33] HITS file was successfully produced:
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc 919776548 Nov 26 03:00 shared/HITS.pool.root.1
[2025-11-26 03:04:33]  *** Contents of shared directory: ***
[2025-11-26 03:04:33] total 1311252
[2025-11-26 03:04:33] -rw-r--r--. 2 boinc boinc 407855003 Nov 25 02:03 ATLAS.root_0
[2025-11-26 03:04:33] -rw-r--r--. 2 boinc boinc    590112 Nov 25 02:03 input.tar.gz
[2025-11-26 03:04:33] -rw-r--r--. 2 boinc boinc     15847 Nov 25 02:03 start_atlas.sh
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc 919776548 Nov 26 03:00 HITS.pool.root.1
[2025-11-26 03:04:33] -rw-------. 1 boinc boinc  14479360 Nov 26 03:04 result.tar.gz
03:04:35 (29864): run_atlas exited; CPU time 340829.963881
03:04:35 (29864): called boinc_finish(0)

</stderr_txt>
]]>

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