Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:47:17 (3297): wrapper (7.7.26015): starting
19:47:17 (3297): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 19:47:17] Arguments: --nthreads 8
[2025-11-24 19:47:17] Threads: 8
[2025-11-24 19:47:17] Checking for CVMFS
[2025-11-24 19:47:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 19:47:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 19:47:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 19:47:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 19:47:19] 2.11.2.0 14339 282889 141472 153255 1 85 14283722 25165825 4632 130560 18 154298406 99.889 80820200 3763 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 19:47:19] CVMFS is ok
[2025-11-24 19:47:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 19:47:19] Checking for apptainer binary...
[2025-11-24 19:47:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 19:47:19] Running /usr/bin/apptainer --version
[2025-11-24 19:47:19] apptainer version 1.3.2-1.el7
[2025-11-24 19:47:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 19:47:32] cg-vwn496.simple-grid.lan
[2025-11-24 19:47:32] apptainer works
[2025-11-24 19:47:32] Set ATHENA_PROC_NUMBER=8
[2025-11-24 19:47:32] Set ATHENA_CORE_NUMBER=8
[2025-11-24 19:47:32] Starting ATLAS job with PandaID=6891567006
[2025-11-24 19:47:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 18:37:59]  *** The last 200 lines of the pilot log: ***
[2025-11-25 18:37:59] 2025-11-25 17:36:42,690 | INFO     | monitor loop #5548: job 0:6891567006 is in state 'finished'
[2025-11-25 18:37:59] 2025-11-25 17:36:42,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:37:59] 2025-11-25 17:36:43,489 | INFO     | time since job start (81918s) is within the limit (172800.0s)
[2025-11-25 18:37:59] 2025-11-25 17:36:45,195 | INFO     | monitor loop #5549: job 0:6891567006 is in state 'finished'
[2025-11-25 18:37:59] 2025-11-25 17:36:45,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:37:59] 2025-11-25 17:36:45,495 | INFO     | time since job start (81920s) is within the limit (172800.0s)
[2025-11-25 18:37:59] 2025-11-25 17:36:47,502 | INFO     | time since job start (81922s) is within the limit (172800.0s)
[2025-11-25 18:37:59] 2025-11-25 17:36:47,699 | INFO     | monitor loop #5550: job 0:6891567006 is in state 'finished'
[2025-11-25 18:37:59] 2025-11-25 17:36:47,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:37:59] 2025-11-25 17:36:49,511 | INFO     | time since job start (81924s) is within the limit (172800.0s)
[2025-11-25 18:37:59] 2025-11-25 17:36:50,213 | INFO     | monitor loop #5551: job 0:6891567006 is in state 'finished'
[2025-11-25 18:37:59] 2025-11-25 17:36:50,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:37:59] 2025-11-25 17:36:51,388 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 18:37:59] 2025-11-25 17:36:51,391 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-25 18:37:59] 2025-11-25 17:36:51,393 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6891567006/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 18:37:59] 2025-11-25 17:36:51,394 | INFO     | extracted standard info from prmon json
[2025-11-25 18:37:59] 2025-11-25 17:36:51,394 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 18:37:59] 2025-11-25 17:36:51,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 18:37:59] 2025-11-25 17:36:51,418 | INFO     | fitting pss+swap vs Time
[2025-11-25 18:37:59] 2025-11-25 17:36:51,420 | INFO     | sum of square deviations: 734462976000.078
[2025-11-25 18:37:59] 2025-11-25 17:36:51,462 | INFO     | sum of deviations: 2719231209998.169
[2025-11-25 18:37:59] 2025-11-25 17:36:51,462 | INFO     | mean x: 1764051459.1252813
[2025-11-25 18:37:59] 2025-11-25 17:36:51,462 | INFO     | mean y: 2820816.9032258065
[2025-11-25 18:37:59] 2025-11-25 17:36:51,463 | INFO     | intersect: -6528296394.505079
[2025-11-25 18:37:59] 2025-11-25 17:36:51,464 | INFO     | chi2: 30.37401880454522
[2025-11-25 18:37:59] 2025-11-25 17:36:51,466 | INFO     | sum of square deviations: 726229641903.7233
[2025-11-25 18:37:59] 2025-11-25 17:36:51,507 | INFO     | sum of deviations: 3148417338871.808
[2025-11-25 18:37:59] 2025-11-25 17:36:51,507 | INFO     | mean x: 1764051306.629518
[2025-11-25 18:37:59] 2025-11-25 17:36:51,508 | INFO     | mean y: 2828764.9081325303
[2025-11-25 18:37:59] 2025-11-25 17:36:51,508 | INFO     | intersect: -7644848223.176219
[2025-11-25 18:37:59] 2025-11-25 17:36:51,509 | INFO     | chi2: 27.210904286621606
[2025-11-25 18:37:59] 2025-11-25 17:36:51,509 | INFO     | current chi2=27.210904286621606 (change=10.413882134853619 %)
[2025-11-25 18:37:59] 2025-11-25 17:36:51,509 | INFO     | right removable region: 1327
[2025-11-25 18:37:59] 2025-11-25 17:36:51,511 | INFO     | sum of square deviations: 726228726903.7234
[2025-11-25 18:37:59] 2025-11-25 17:36:51,520 | INFO     | time since job start (81926s) is within the limit (172800.0s)
[2025-11-25 18:37:59] 2025-11-25 17:36:51,555 | INFO     | sum of deviations: 2165580696512.374
[2025-11-25 18:37:59] 2025-11-25 17:36:51,556 | INFO     | mean x: 1764051611.629518
[2025-11-25 18:37:59] 2025-11-25 17:36:51,556 | INFO     | mean y: 2831070.2710843375
[2025-11-25 18:37:59] 2025-11-25 17:36:51,556 | INFO     | intersect: -5257489784.955665
[2025-11-25 18:37:59] 2025-11-25 17:36:51,557 | INFO     | chi2: 25.655141933359285
[2025-11-25 18:37:59] 2025-11-25 17:36:51,558 | INFO     | current chi2=25.655141933359285 (change=15.535898958750211 %)
[2025-11-25 18:37:59] 2025-11-25 17:36:51,558 | INFO     | left removable region: 10
[2025-11-25 18:37:59] 2025-11-25 17:36:51,559 | INFO     | sum of square deviations: 708331574915.5718
[2025-11-25 18:37:59] 2025-11-25 17:36:51,600 | INFO     | sum of deviations: 2192006602868.4048
[2025-11-25 18:37:59] 2025-11-25 17:36:51,601 | INFO     | mean x: 1764051581.1389523
[2025-11-25 18:37:59] 2025-11-25 17:36:51,601 | INFO     | mean y: 2850180.77372817
[2025-11-25 18:37:59] 2025-11-25 17:36:51,601 | INFO     | intersect: -5456193084.54722
[2025-11-25 18:37:59] 2025-11-25 17:36:51,603 | INFO     | chi2: 18.02276999718148
[2025-11-25 18:37:59] 2025-11-25 17:36:51,603 | INFO     | current memory leak: 3.09 B/s (using 1317 data points, chi2=18.02)
[2025-11-25 18:37:59] 2025-11-25 17:36:51,605 | INFO     | could have reported an average CPU frequency of 2249 MHz (45 samples)
[2025-11-25 18:37:59] 2025-11-25 17:36:51,605 | INFO     | ..............................
[2025-11-25 18:37:59] 2025-11-25 17:36:51,605 | INFO     | . Timing measurements:
[2025-11-25 18:37:59] 2025-11-25 17:36:51,605 | INFO     | . get job = 0 s
[2025-11-25 18:37:59] 2025-11-25 17:36:51,605 | INFO     | . initial setup = 6 s
[2025-11-25 18:37:59] 2025-11-25 17:36:51,606 | INFO     | . payload setup = 169 s
[2025-11-25 18:37:59] 2025-11-25 17:36:51,606 | INFO     | . stage-in = 0 s
[2025-11-25 18:37:59] 2025-11-25 17:36:51,606 | INFO     | . payload execution = 81440 s
[2025-11-25 18:37:59] 2025-11-25 17:36:51,606 | INFO     | . stage-out = 5 s
[2025-11-25 18:37:59] 2025-11-25 17:36:51,606 | INFO     | . log creation = 2 s
[2025-11-25 18:37:59] 2025-11-25 17:36:51,606 | INFO     | ..............................
[2025-11-25 18:37:59] 2025-11-25 17:36:51,723 | INFO     | 
[2025-11-25 18:37:59] 2025-11-25 17:36:51,723 | INFO     | job summary report
[2025-11-25 18:37:59] 2025-11-25 17:36:51,723 | INFO     | --------------------------------------------------
[2025-11-25 18:37:59] 2025-11-25 17:36:51,723 | INFO     | PanDA job id: 6891567006
[2025-11-25 18:37:59] 2025-11-25 17:36:51,723 | INFO     | task id: 47493068
[2025-11-25 18:37:59] 2025-11-25 17:36:51,723 | INFO     | errors: (none)
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | pilot state: finished 
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | transexitcode: 0
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | exeerrorcode: 0
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | exeerrordiag: 
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | exitcode: 0
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | exitmsg: OK
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | cpuconsumptiontime: 302341 s
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | nevents: 1000
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | neventsw: 0
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | pid: 13673
[2025-11-25 18:37:59] 2025-11-25 17:36:51,724 | INFO     | pgrp: 13673
[2025-11-25 18:37:59] 2025-11-25 17:36:51,725 | INFO     | corecount: 8
[2025-11-25 18:37:59] 2025-11-25 17:36:51,725 | INFO     | event service: False
[2025-11-25 18:37:59] 2025-11-25 17:36:51,725 | INFO     | sizes: {0: 2284073, 1: 2284328, 12: 2284328, 23: 2284356, 33: 2284384, 44: 2284440, 55: 2284596, 66: 2284624, 76: 2284652, 87: 2284708, 98: 2285306, 109: 2285306, 
[2025-11-25 18:37:59] 2025-11-25 17:36:51,725 | INFO     | --------------------------------------------------
[2025-11-25 18:37:59] 2025-11-25 17:36:51,725 | INFO     | 
[2025-11-25 18:37:59] 2025-11-25 17:36:51,725 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-11-25 18:37:59] 2025-11-25 17:36:52,066 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,066 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,066 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,066 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,067 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,068 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 18:37:59] 2025-11-25 17:36:52,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,068 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 18:37:59] 2025-11-25 17:36:52,068 | INFO     | job 6891567006 has completed (purged errors)
[2025-11-25 18:37:59] 2025-11-25 17:36:52,068 | INFO     | overall cleanup function is called
[2025-11-25 18:37:59] 2025-11-25 17:36:53,086 | INFO     | --- collectZombieJob: --- 10, [13673]
[2025-11-25 18:37:59] 2025-11-25 17:36:53,086 | INFO     | zombie collector waiting for pid 13673
[2025-11-25 18:37:59] 2025-11-25 17:36:53,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 18:37:59] 2025-11-25 17:36:53,086 | INFO     | collected zombie processes
[2025-11-25 18:37:59] 2025-11-25 17:36:53,086 | INFO     | will attempt to kill all subprocesses of pid=13673
[2025-11-25 18:37:59] 2025-11-25 17:36:53,201 | INFO     | process IDs to be killed: [13673] (in reverse order)
[2025-11-25 18:37:59] 2025-11-25 17:36:54,095 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 18:37:59] 2025-11-25 17:36:54,096 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 18:37:59] 2025-11-25 17:36:54,099 | INFO     | did not find any defunct processes belonging to 13673
[2025-11-25 18:37:59] 2025-11-25 17:36:54,102 | INFO     | did not find any defunct processes belonging to 13673
[2025-11-25 18:37:59] 2025-11-25 17:36:54,157 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 18:37:59] 2025-11-25 17:36:54,158 | INFO     | ready for new job
[2025-11-25 18:37:59] 2025-11-25 17:36:54,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 18:37:59] 2025-11-25 17:36:54,164 | INFO     | ***************************************
[2025-11-25 18:37:59] 2025-11-25 17:36:54,164 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 18:37:59] 2025-11-25 17:36:54,164 | INFO     | ***************************************
[2025-11-25 18:37:59] 2025-11-25 17:36:54,164 | INFO     | 
[2025-11-25 18:37:59] 2025-11-25 17:36:54,165 | INFO     | pilot is running in a VM
[2025-11-25 18:37:59] 2025-11-25 17:36:54,165 | INFO     | architecture information:
[2025-11-25 18:37:59] 2025-11-25 17:36:54,171 | INFO     | executing command: cat /etc/os-release
[2025-11-25 18:37:59] 2025-11-25 17:36:54,320 | INFO     | cat /etc/os-release:
[2025-11-25 18:37:59] NAME="CentOS Linux"
[2025-11-25 18:37:59] VERSION="7 (Core)"
[2025-11-25 18:37:59] ID="centos"
[2025-11-25 18:37:59] ID_LIKE="rhel fedora"
[2025-11-25 18:37:59] VERSION_ID="7"
[2025-11-25 18:37:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 18:37:59] ANSI_COLOR="0;31"
[2025-11-25 18:37:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 18:37:59] HOME_URL="https://www.centos.org/"
[2025-11-25 18:37:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 18:37:59] 
[2025-11-25 18:37:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 18:37:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 18:37:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 18:37:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 18:37:59] 
[2025-11-25 18:37:59] 2025-11-25 17:36:54,321 | INFO     | ***************************************
[2025-11-25 18:37:59] 2025-11-25 17:36:54,824 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-11-25 18:37:59] 2025-11-25 17:36:54,973 | INFO     | sufficient remaining disk space (495644049408 B)
[2025-11-25 18:37:59] 2025-11-25 17:36:54,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 18:37:59] 2025-11-25 17:36:54,973 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 18:37:59] 2025-11-25 17:36:54,973 | INFO     | update_server=False
[2025-11-25 18:37:59] 2025-11-25 17:36:54,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 18:37:59] 2025-11-25 17:36:54,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 18:37:59] 2025-11-25 17:36:54,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 18:37:59] 2025-11-25 17:36:55,200 | INFO     | all data control threads have been joined
[2025-11-25 18:37:59] 2025-11-25 17:36:55,231 | INFO     | all payload control threads have been joined
[2025-11-25 18:37:59] 2025-11-25 17:36:55,231 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 18:37:59] 2025-11-25 17:36:55,231 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 18:37:59] 2025-11-25 17:36:55,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:37:59] 2025-11-25 17:36:55,236 | INFO     | will abort loop
[2025-11-25 18:37:59] 2025-11-25 17:36:55,980 | INFO     | [job] retrieve thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:56,118 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:56,172 | INFO     | [payload] failed_post thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:56,206 | INFO     | [data] control thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:56,235 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:56,237 | INFO     | [payload] control thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:56,238 | INFO     | [job] validate thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:56,242 | INFO     | [job] job monitor thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:56,376 | INFO     | [data] copytool_in thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:56,569 | INFO     | all job control threads have been joined
[2025-11-25 18:37:59] 2025-11-25 17:36:56,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:56,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:37:59] 2025-11-25 17:36:56,981 | INFO     | [data] copytool_out thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:57,349 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:57,557 | INFO     | [payload] validate_post thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:57,575 | INFO     | [job] control thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:57,751 | INFO     | [job] queue monitor thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:36:58,983 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 18:37:59] 2025-11-25 17:37:13,100 [wrapper] supervise_pilot (15 min periods counter: 92)
[2025-11-25 18:37:59] 2025-11-25 17:37:24,724 | INFO     | PID=7159 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 18:37:59] 2025-11-25 17:37:24,724 | INFO     | .. there are 9 such processes running
[2025-11-25 18:37:59] 2025-11-25 17:37:24,725 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 18:37:59] 2025-11-25 17:37:24,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 18:37:59] 2025-11-25 17:37:24,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 18:37:59] 2025-11-25 17:37:47,716 | INFO     | [monitor] cgroup control has ended
[2025-11-25 18:37:59] 2025-11-25 17:37:48,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139811163289408)>', '<ExcThread(monitor, started 139810505221888)>']
[2025-11-25 18:37:59] 2025-11-25 17:37:49,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 18:37:59] 2025-11-25 17:37:49,872 | INFO     | [monitor] control thread has ended
[2025-11-25 18:37:59] 2025-11-25 17:37:54,015 | INFO     | all workflow threads have been joined
[2025-11-25 18:37:59] 2025-11-25 17:37:54,015 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 18:37:59] 2025-11-25 17:37:54,015 | INFO     | traces error code: 0
[2025-11-25 18:37:59] 2025-11-25 17:37:54,016 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 18:37:59] 2025-11-25 17:37:54,388 [wrapper] ==== pilot stdout END ====
[2025-11-25 18:37:59] 2025-11-25 17:37:54,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 18:37:59] 2025-11-25 17:37:54,485 [wrapper] pilotpid: 7159
[2025-11-25 18:37:59] 2025-11-25 17:37:54,534 [wrapper] Pilot exit status: 0
[2025-11-25 18:37:59] 2025-11-25 17:37:54,924 [wrapper] pandaids: 6891567006
[2025-11-25 18:37:59] 2025-11-25 17:37:55,765 [wrapper] cleanup supervisor_pilot 14447 7160
[2025-11-25 18:37:59] 2025-11-25 17:37:55,791 [wrapper] Test setup, not cleaning
[2025-11-25 18:37:59] 2025-11-25 17:37:55,861 [wrapper] apfmon messages muted
[2025-11-25 18:37:59] 2025-11-25 17:37:55,934 [wrapper] ==== wrapper stdout END ====
[2025-11-25 18:37:59] 2025-11-25 17:37:56,032 [wrapper] ==== wrapper stderr END ====
[2025-11-25 18:37:59]  *** Error codes and diagnostics ***
[2025-11-25 18:37:59]     "exeErrorCode": 0,
[2025-11-25 18:37:59]     "exeErrorDiag": "",
[2025-11-25 18:37:59]     "pilotErrorCode": 0,
[2025-11-25 18:37:59]     "pilotErrorDiag": "",
[2025-11-25 18:37:59]  *** Listing of results directory ***
[2025-11-25 18:37:59] total 1330592
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:32 queuedata.json
[2025-11-25 18:37:59] -rwx------. 1 boinc boinc     36292 Nov 18 16:32 runpilot2-wrapper.sh
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc       100 Nov 24 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 18:37:59] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 19:47 run_atlas
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc       105 Nov 24 19:47 job.xml
[2025-11-25 18:37:59] -rw-r--r--. 2 boinc boinc 408314153 Nov 24 19:47 EVNT.47493065._000154.pool.root.1
[2025-11-25 18:37:59] drwxrwx--x. 2 boinc boinc        68 Nov 24 19:47 shared
[2025-11-25 18:37:59] -rw-r--r--. 2 boinc boinc    590100 Nov 24 19:47 input.tar.gz
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc      6393 Nov 24 19:47 init_data.xml
[2025-11-25 18:37:59] -rw-r--r--. 2 boinc boinc     15120 Nov 24 19:47 start_atlas.sh
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc         0 Nov 24 19:47 boinc_lockfile
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc      2773 Nov 24 19:47 pandaJob.out
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc    991801 Nov 24 19:51 agis_schedconf.cvmfs.json
[2025-11-25 18:37:59] drwx------. 5 boinc boinc      4096 Nov 24 19:51 pilot3
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc       533 Nov 25 18:07 boinc_task_state.xml
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc 923436231 Nov 25 18:33 HITS.47493068._001538.pool.root.1
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc      1029 Nov 25 18:35 memory_monitor_summary.json
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc   1516240 Nov 25 18:35 agis_ddmendpoints.agis.ALL.json
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc   2442093 Nov 25 18:35 log.47493068._001538.job.log.tgz.1
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc        95 Nov 25 18:36 pilot_heartbeat.json
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc      7949 Nov 25 18:36 heartbeat.json
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc      8192 Nov 25 18:37 boinc_mmap_file
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc        29 Nov 25 18:37 wrapper_checkpoint.txt
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc      5070 Nov 25 18:37 pilotlog.txt
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc  10990465 Nov 25 18:37 log.47493068._001538.job.log.1
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc       353 Nov 25 18:37 output.list
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc       620 Nov 25 18:37 runtime_log
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc  13455360 Nov 25 18:37 result.tar.gz
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc       662 Nov 25 18:37 XKENDmXscf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpUFKDmQJD6Ho.diag
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc      8717 Nov 25 18:37 runtime_log.err
[2025-11-25 18:37:59] -rw-r--r--. 1 boinc boinc     21391 Nov 25 18:37 stderr.txt
[2025-11-25 18:37:59] HITS file was successfully produced:
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc 923436231 Nov 25 18:33 shared/HITS.pool.root.1
[2025-11-25 18:37:59]  *** Contents of shared directory: ***
[2025-11-25 18:37:59] total 1314280
[2025-11-25 18:37:59] -rw-r--r--. 2 boinc boinc 408314153 Nov 24 19:47 ATLAS.root_0
[2025-11-25 18:37:59] -rw-r--r--. 2 boinc boinc    590100 Nov 24 19:47 input.tar.gz
[2025-11-25 18:37:59] -rw-r--r--. 2 boinc boinc     15120 Nov 24 19:47 start_atlas.sh
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc 923436231 Nov 25 18:33 HITS.pool.root.1
[2025-11-25 18:37:59] -rw-------. 1 boinc boinc  13455360 Nov 25 18:37 result.tar.gz
18:38:00 (3297): run_atlas exited; CPU time 302827.460604
18:38:00 (3297): called boinc_finish(0)

</stderr_txt>
]]>

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