Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
13:54:42 (2287902): wrapper (7.7.26015): starting
13:54:42 (2287902): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 13:54:42] Arguments: --nthreads 3
[2025-11-23 13:54:42] Threads: 3
[2025-11-23 13:54:42] Checking for CVMFS
[2025-11-23 13:54:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 13:54:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 13:54:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 13:54:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 13:54:42] 2.12.7.0 3613689 2287 44488 153209 3 90 4435024 6144000 6409 130560 0 8289446 99.934 547100 705 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-23 13:54:42] CVMFS is ok
[2025-11-23 13:54:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 13:54:42] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-23 13:54:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-23 13:54:42] Further information can be found at the LHC@home message board.
[2025-11-23 13:54:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 13:54:42] Checking for apptainer binary...
[2025-11-23 13:54:42] apptainer is not installed, using version from CVMFS
[2025-11-23 13:54:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 13:54:42] biggy
[2025-11-23 13:54:42] apptainer works
[2025-11-23 13:54:42] Set ATHENA_PROC_NUMBER=3
[2025-11-23 13:54:42] Set ATHENA_CORE_NUMBER=3
[2025-11-23 13:54:42] Starting ATLAS job with PandaID=6894266740
[2025-11-23 13:54:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 23:04:55]  *** The last 200 lines of the pilot log: ***
[2025-11-23 23:04:55] 2025-11-23 22:04:19,513 | INFO     | preparing for final server update for job 6894266740 in state='finished'
[2025-11-23 23:04:55] 2025-11-23 22:04:19,579 | INFO     | monitor loop #2471: job 0:6894266740 is in state 'finished'
[2025-11-23 23:04:55] 2025-11-23 22:04:19,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:04:55] 2025-11-23 22:04:19,691 | INFO     | time since job start (32971s) is within the limit (172800.0s)
[2025-11-23 23:04:55] 2025-11-23 22:04:20,420 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-11-23 23:04:55] 2025-11-23 22:04:20,421 | INFO     | this job has now completed (state=finished)
[2025-11-23 23:04:55] 2025-11-23 22:04:20,421 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-23 23:04:55] 2025-11-23 22:04:20,421 | INFO     | log transfer has been attempted: DONE
[2025-11-23 23:04:55] 2025-11-23 22:04:20,421 | INFO     | job 6894266740 has finished - writing final server update
[2025-11-23 23:04:55] 2025-11-23 22:04:20,421 | INFO     | total number of processed events: 1000 (read)
[2025-11-23 23:04:55] 2025-11-23 22:04:20,421 | INFO     | executing command: lscpu
[2025-11-23 23:04:55] 2025-11-23 22:04:20,440 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-23 23:04:55] 2025-11-23 22:04:20,847 | INFO     | PID=2291756 has CPU usage=16.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-23 23:04:55] 2025-11-23 22:04:20,847 | INFO     | .. there are 10 such processes running
[2025-11-23 23:04:55] 2025-11-23 22:04:21,848 | INFO     | time since job start (32973s) is within the limit (172800.0s)
[2025-11-23 23:04:55] 2025-11-23 22:04:22,082 | INFO     | monitor loop #2472: job 0:6894266740 is in state 'finished'
[2025-11-23 23:04:55] 2025-11-23 22:04:22,082 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:04:55] 2025-11-23 22:04:22,495 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 23:04:55] 2025-11-23 22:04:22,497 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5141.99390625
[2025-11-23 23:04:55] 2025-11-23 22:04:22,500 | INFO     | using path: /single_8TB/boinc-client/slots/4/PanDA_Pilot-6894266740/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 23:04:55] 2025-11-23 22:04:22,500 | INFO     | extracted standard info from prmon json
[2025-11-23 23:04:55] 2025-11-23 22:04:22,500 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 23:04:55] 2025-11-23 22:04:22,500 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 23:04:55] 2025-11-23 22:04:22,504 | INFO     | fitting pss+swap vs Time
[2025-11-23 23:04:55] 2025-11-23 22:04:22,504 | INFO     | sum of square deviations: 49098557790.0
[2025-11-23 23:04:55] 2025-11-23 22:04:22,506 | INFO     | sum of deviations: 4144772134248.0
[2025-11-23 23:04:55] 2025-11-23 22:04:22,507 | INFO     | mean x: 1763918976.0
[2025-11-23 23:04:55] 2025-11-23 22:04:22,507 | INFO     | mean y: 3881906.988909427
[2025-11-23 23:04:55] 2025-11-23 22:04:22,507 | INFO     | intersect: -148901555398.64862
[2025-11-23 23:04:55] 2025-11-23 22:04:22,507 | INFO     | chi2: 22.79669280052819
[2025-11-23 23:04:55] 2025-11-23 22:04:22,507 | INFO     | sum of square deviations: 47749769710.0
[2025-11-23 23:04:55] 2025-11-23 22:04:22,510 | INFO     | sum of deviations: 4339091920901.0005
[2025-11-23 23:04:55] 2025-11-23 22:04:22,510 | INFO     | mean x: 1763918823.5
[2025-11-23 23:04:55] 2025-11-23 22:04:22,510 | INFO     | mean y: 3903817.8768656715
[2025-11-23 23:04:55] 2025-11-23 22:04:22,510 | INFO     | intersect: -160285998367.16235
[2025-11-23 23:04:55] 2025-11-23 22:04:22,510 | INFO     | chi2: 19.166881239010987
[2025-11-23 23:04:55] 2025-11-23 22:04:22,510 | INFO     | current chi2=19.166881239010987 (change=15.922535752348704 %)
[2025-11-23 23:04:55] 2025-11-23 22:04:22,510 | INFO     | right removable region: 535
[2025-11-23 23:04:55] 2025-11-23 22:04:22,511 | INFO     | sum of square deviations: 47749769710.0
[2025-11-23 23:04:55] 2025-11-23 22:04:22,513 | INFO     | sum of deviations: 3930119846840.4995
[2025-11-23 23:04:55] 2025-11-23 22:04:22,513 | INFO     | mean x: 1763919128.5
[2025-11-23 23:04:55] 2025-11-23 22:04:22,513 | INFO     | mean y: 3906143.1399253733
[2025-11-23 23:04:55] 2025-11-23 22:04:22,514 | INFO     | intersect: -145178230173.79453
[2025-11-23 23:04:55] 2025-11-23 22:04:22,514 | INFO     | chi2: 21.21911311215445
[2025-11-23 23:04:55] 2025-11-23 22:04:22,514 | INFO     | current chi2=21.21911311215445 (change=6.920212954473774 %)
[2025-11-23 23:04:55] 2025-11-23 22:04:22,514 | INFO     | left removable region: 10
[2025-11-23 23:04:55] 2025-11-23 22:04:22,514 | INFO     | sum of square deviations: 44869864550.0
[2025-11-23 23:04:55] 2025-11-23 22:04:22,517 | INFO     | sum of deviations: 3954079682156.0005
[2025-11-23 23:04:55] 2025-11-23 22:04:22,517 | INFO     | mean x: 1763919098.0
[2025-11-23 23:04:55] 2025-11-23 22:04:22,517 | INFO     | mean y: 3945879.946666667
[2025-11-23 23:04:55] 2025-11-23 22:04:22,517 | INFO     | intersect: -155438392453.76108
[2025-11-23 23:04:55] 2025-11-23 22:04:22,517 | INFO     | chi2: 17.371809599431195
[2025-11-23 23:04:55] 2025-11-23 22:04:22,517 | INFO     | current memory leak: 88.12 B/s (using 525 data points, chi2=17.37)
[2025-11-23 23:04:55] 2025-11-23 22:04:22,517 | INFO     | could have reported an average CPU frequency of 5121 MHz (22 samples)
[2025-11-23 23:04:55] 2025-11-23 22:04:22,518 | INFO     | ..............................
[2025-11-23 23:04:55] 2025-11-23 22:04:22,518 | INFO     | . Timing measurements:
[2025-11-23 23:04:55] 2025-11-23 22:04:22,518 | INFO     | . get job = 0 s
[2025-11-23 23:04:55] 2025-11-23 22:04:22,518 | INFO     | . initial setup = 1 s
[2025-11-23 23:04:55] 2025-11-23 22:04:22,518 | INFO     | . payload setup = 2 s
[2025-11-23 23:04:55] 2025-11-23 22:04:22,518 | INFO     | . stage-in = 0 s
[2025-11-23 23:04:55] 2025-11-23 22:04:22,518 | INFO     | . payload execution = 32948 s
[2025-11-23 23:04:55] 2025-11-23 22:04:22,518 | INFO     | . stage-out = 3 s
[2025-11-23 23:04:55] 2025-11-23 22:04:22,518 | INFO     | . log creation = 0 s
[2025-11-23 23:04:55] 2025-11-23 22:04:22,518 | INFO     | ..............................
[2025-11-23 23:04:55] 2025-11-23 22:04:22,859 | INFO     | 
[2025-11-23 23:04:55] 2025-11-23 22:04:22,859 | INFO     | job summary report
[2025-11-23 23:04:55] 2025-11-23 22:04:22,859 | INFO     | --------------------------------------------------
[2025-11-23 23:04:55] 2025-11-23 22:04:22,859 | INFO     | PanDA job id: 6894266740
[2025-11-23 23:04:55] 2025-11-23 22:04:22,859 | INFO     | task id: 47533967
[2025-11-23 23:04:55] 2025-11-23 22:04:22,859 | INFO     | errors: (none)
[2025-11-23 23:04:55] 2025-11-23 22:04:22,859 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 23:04:55] 2025-11-23 22:04:22,859 | INFO     | pilot state: finished 
[2025-11-23 23:04:55] 2025-11-23 22:04:22,859 | INFO     | transexitcode: 0
[2025-11-23 23:04:55] 2025-11-23 22:04:22,859 | INFO     | exeerrorcode: 0
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | exeerrordiag: 
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | exitcode: 0
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | exitmsg: OK
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | cpuconsumptiontime: 97627 s
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | nevents: 1000
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | neventsw: 0
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | pid: 2304453
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | pgrp: 2304453
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | corecount: 3
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | event service: False
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | sizes: {0: 2298766, 2: 2299028, 11: 2299056, 32955: 2339940, 32958: 2349010, 32961: 2349200}
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | --------------------------------------------------
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | 
[2025-11-23 23:04:55] 2025-11-23 22:04:22,860 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/4
[2025-11-23 23:04:55] 2025-11-23 22:04:22,874 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,874 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,874 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,874 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,874 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,874 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,874 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | job 6894266740 has completed (purged errors)
[2025-11-23 23:04:55] 2025-11-23 22:04:22,875 | INFO     | overall cleanup function is called
[2025-11-23 23:04:55] 2025-11-23 22:04:23,886 | INFO     | --- collectZombieJob: --- 10, [2304453]
[2025-11-23 23:04:55] 2025-11-23 22:04:23,886 | INFO     | zombie collector waiting for pid 2304453
[2025-11-23 23:04:55] 2025-11-23 22:04:23,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 23:04:55] 2025-11-23 22:04:23,886 | INFO     | collected zombie processes
[2025-11-23 23:04:55] 2025-11-23 22:04:23,886 | INFO     | will attempt to kill all subprocesses of pid=2304453
[2025-11-23 23:04:55] 2025-11-23 22:04:24,015 | INFO     | process IDs to be killed: [2304453] (in reverse order)
[2025-11-23 23:04:55] 2025-11-23 22:04:24,071 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 23:04:55] 2025-11-23 22:04:24,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 23:04:55] 2025-11-23 22:04:24,076 | INFO     | did not find any defunct processes belonging to 2304453
[2025-11-23 23:04:55] 2025-11-23 22:04:24,080 | INFO     | did not find any defunct processes belonging to 2304453
[2025-11-23 23:04:55] 2025-11-23 22:04:24,080 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 23:04:55] 2025-11-23 22:04:24,081 | INFO     | ready for new job
[2025-11-23 23:04:55] 2025-11-23 22:04:24,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 23:04:55] 2025-11-23 22:04:24,081 | INFO     | ***************************************
[2025-11-23 23:04:55] 2025-11-23 22:04:24,082 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 23:04:55] 2025-11-23 22:04:24,082 | INFO     | ***************************************
[2025-11-23 23:04:55] 2025-11-23 22:04:24,082 | INFO     | 
[2025-11-23 23:04:55] 2025-11-23 22:04:24,083 | INFO     | architecture information:
[2025-11-23 23:04:55] 2025-11-23 22:04:24,083 | INFO     | executing command: cat /etc/os-release
[2025-11-23 23:04:55] 2025-11-23 22:04:24,093 | INFO     | cat /etc/os-release:
[2025-11-23 23:04:55] NAME="CentOS Linux"
[2025-11-23 23:04:55] VERSION="7 (Core)"
[2025-11-23 23:04:55] ID="centos"
[2025-11-23 23:04:55] ID_LIKE="rhel fedora"
[2025-11-23 23:04:55] VERSION_ID="7"
[2025-11-23 23:04:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 23:04:55] ANSI_COLOR="0;31"
[2025-11-23 23:04:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 23:04:55] HOME_URL="https://www.centos.org/"
[2025-11-23 23:04:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 23:04:55] 
[2025-11-23 23:04:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 23:04:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 23:04:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 23:04:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 23:04:55] 
[2025-11-23 23:04:55] 2025-11-23 22:04:24,093 | INFO     | ***************************************
[2025-11-23 23:04:55] 2025-11-23 22:04:24,596 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/4
[2025-11-23 23:04:55] 2025-11-23 22:04:24,605 | INFO     | sufficient remaining disk space (948675018752 B)
[2025-11-23 23:04:55] 2025-11-23 22:04:24,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 23:04:55] 2025-11-23 22:04:24,605 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 23:04:55] 2025-11-23 22:04:24,606 | INFO     | update_server=False
[2025-11-23 23:04:55] 2025-11-23 22:04:24,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 23:04:55] 2025-11-23 22:04:24,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 23:04:55] 2025-11-23 22:04:25,010 | INFO     | all data control threads have been joined
[2025-11-23 23:04:55] 2025-11-23 22:04:25,517 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 23:04:55] 2025-11-23 22:04:25,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:04:55] 2025-11-23 22:04:25,590 | INFO     | aborting loop
[2025-11-23 23:04:55] 2025-11-23 22:04:25,611 | INFO     | [job] retrieve thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:25,704 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:26,001 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:26,015 | INFO     | [data] control thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:26,055 | INFO     | all job control threads have been joined
[2025-11-23 23:04:55] 2025-11-23 22:04:26,071 | INFO     | all payload control threads have been joined
[2025-11-23 23:04:55] 2025-11-23 22:04:26,135 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:26,178 | INFO     | [data] copytool_in thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:26,595 | INFO     | [job] job monitor thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:26,729 | INFO     | [payload] validate_post thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:26,814 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:26,965 | INFO     | [payload] failed_post thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:26,984 | INFO     | [data] copytool_out thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:27,033 | INFO     | [job] validate thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:27,060 | INFO     | [job] control thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:27,076 | INFO     | [payload] control thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:27,561 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:04:55] 2025-11-23 22:04:28,566 | INFO     | [job] queue monitor thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:29,522 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 23:04:55] 2025-11-23 22:04:42,264 | INFO     | [monitor] cgroup control has ended
[2025-11-23 23:04:55] 2025-11-23 22:04:43,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128169216366400)>', '<ExcThread(monitor, started 128168383993600)>']
[2025-11-23 23:04:55] 2025-11-23 22:04:48,856 | INFO     | all workflow threads have been joined
[2025-11-23 23:04:55] 2025-11-23 22:04:48,856 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 23:04:55] 2025-11-23 22:04:48,856 | INFO     | traces error code: 0
[2025-11-23 23:04:55] 2025-11-23 22:04:48,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 23:04:55] 2025-11-23 22:04:55,064 | INFO     | PID=2291756 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 23:04:55] 2025-11-23 22:04:55,064 | INFO     | .. there are 10 such processes running
[2025-11-23 23:04:55] 2025-11-23 22:04:55,064 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 23:04:55] 2025-11-23 22:04:55,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 23:04:55] 2025-11-23 22:04:55,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 23:04:55] 2025-11-23 22:04:55,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 23:04:55] 2025-11-23 22:04:55,065 | INFO     | [monitor] control thread has ended
[2025-11-23 23:04:55] 2025-11-23 22:04:55,139 [wrapper] ==== pilot stdout END ====
[2025-11-23 23:04:55] 2025-11-23 22:04:55,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 23:04:55] 2025-11-23 22:04:55,142 [wrapper] pilotpid: 2291756
[2025-11-23 23:04:55] 2025-11-23 22:04:55,144 [wrapper] Pilot exit status: 0
[2025-11-23 23:04:55] 2025-11-23 22:04:55,149 [wrapper] pandaids: 6894266740
[2025-11-23 23:04:55] 2025-11-23 22:04:55,183 [wrapper] cleanup supervisor_pilot 2900018 2291757
[2025-11-23 23:04:55] 2025-11-23 22:04:55,185 [wrapper] Test setup, not cleaning
[2025-11-23 23:04:55] 2025-11-23 22:04:55,187 [wrapper] apfmon messages muted
[2025-11-23 23:04:55] 2025-11-23 22:04:55,188 [wrapper] ==== wrapper stdout END ====
[2025-11-23 23:04:55] 2025-11-23 22:04:55,189 [wrapper] ==== wrapper stderr END ====
[2025-11-23 23:04:55]  *** Error codes and diagnostics ***
[2025-11-23 23:04:55]     "exeErrorCode": 0,
[2025-11-23 23:04:55]     "exeErrorDiag": "",
[2025-11-23 23:04:55]     "pilotErrorCode": 0,
[2025-11-23 23:04:55]     "pilotErrorDiag": "",
[2025-11-23 23:04:55]  *** Listing of results directory ***
[2025-11-23 23:04:55] total 1314880
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:13 queuedata.json
[2025-11-23 23:04:55] -rwx------ 1 boinc boinc     36292 Nov 21 06:14 runpilot2-wrapper.sh
[2025-11-23 23:04:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 13:54 run_atlas
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc       100 Nov 23 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc       105 Nov 23 13:54 job.xml
[2025-11-23 23:04:55] -rw-r--r-- 2 boinc boinc 409031822 Nov 23 13:54 EVNT.47493127._002237.pool.root.1
[2025-11-23 23:04:55] -rw-r--r-- 2 boinc boinc    590105 Nov 23 13:54 input.tar.gz
[2025-11-23 23:04:55] drwxrwx--x 2 boinc boinc         5 Nov 23 13:54 shared
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc         0 Nov 23 13:54 boinc_setup_complete
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc      6806 Nov 23 13:54 init_data.xml
[2025-11-23 23:04:55] -rw-r--r-- 2 boinc boinc     15847 Nov 23 13:54 start_atlas.sh
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc         0 Nov 23 13:54 boinc_lockfile
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc      2785 Nov 23 13:54 pandaJob.out
[2025-11-23 23:04:55] -rw------- 1 boinc boinc    989784 Nov 23 13:54 agis_schedconf.cvmfs.json
[2025-11-23 23:04:55] drwx------ 5 boinc boinc        22 Nov 23 13:54 pilot3
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc       531 Nov 23 23:00 boinc_task_state.xml
[2025-11-23 23:04:55] -rw------- 1 boinc boinc 926376841 Nov 23 23:03 HITS.47533967._002082.pool.root.1
[2025-11-23 23:04:55] -rw------- 1 boinc boinc      1065 Nov 23 23:04 memory_monitor_summary.json
[2025-11-23 23:04:55] -rw------- 1 boinc boinc   1526164 Nov 23 23:04 agis_ddmendpoints.agis.ALL.json
[2025-11-23 23:04:55] -rw------- 1 boinc boinc   1244335 Nov 23 23:04 log.47533967._002082.job.log.tgz.1
[2025-11-23 23:04:55] -rw------- 1 boinc boinc      8603 Nov 23 23:04 heartbeat.json
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc      8192 Nov 23 23:04 boinc_mmap_file
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc        28 Nov 23 23:04 wrapper_checkpoint.txt
[2025-11-23 23:04:55] -rw------- 1 boinc boinc        95 Nov 23 23:04 pilot_heartbeat.json
[2025-11-23 23:04:55] -rw------- 1 boinc boinc       823 Nov 23 23:04 pilotlog.txt
[2025-11-23 23:04:55] -rw------- 1 boinc boinc   4746755 Nov 23 23:04 log.47533967._002082.job.log.1
[2025-11-23 23:04:55] -rw------- 1 boinc boinc       353 Nov 23 23:04 output.list
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc       620 Nov 23 23:04 runtime_log
[2025-11-23 23:04:55] -rw------- 1 boinc boinc   6010880 Nov 23 23:04 result.tar.gz
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc      8940 Nov 23 23:04 runtime_log.err
[2025-11-23 23:04:55] -rw------- 1 boinc boinc       661 Nov 23 23:04 HHALDmZeYg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAMHKDmqaBEKn.diag
[2025-11-23 23:04:55] -rw-r--r-- 1 boinc boinc     13364 Nov 23 23:04 stderr.txt
[2025-11-23 23:04:55] HITS file was successfully produced:
[2025-11-23 23:04:55] -rw------- 1 boinc boinc 926376841 Nov 23 23:03 shared/HITS.pool.root.1
[2025-11-23 23:04:55]  *** Contents of shared directory: ***
[2025-11-23 23:04:55] total 1305728
[2025-11-23 23:04:55] -rw-r--r-- 2 boinc boinc 409031822 Nov 23 13:54 ATLAS.root_0
[2025-11-23 23:04:55] -rw-r--r-- 2 boinc boinc    590105 Nov 23 13:54 input.tar.gz
[2025-11-23 23:04:55] -rw-r--r-- 2 boinc boinc     15847 Nov 23 13:54 start_atlas.sh
[2025-11-23 23:04:55] -rw------- 1 boinc boinc 926376841 Nov 23 23:03 HITS.pool.root.1
[2025-11-23 23:04:55] -rw------- 1 boinc boinc   6010880 Nov 23 23:04 result.tar.gz
23:04:57 (2287902): run_atlas exited; CPU time 97759.324425
23:04:57 (2287902): called boinc_finish(0)

</stderr_txt>
]]>

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