Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
20:42:40 (1505453): wrapper (7.7.26015): starting
20:42:40 (1505453): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 20:42:40] Arguments: --nthreads 12
[2025-11-24 20:42:40] Threads: 12
[2025-11-24 20:42:40] Checking for CVMFS
[2025-11-24 20:42:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 20:42:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 20:42:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 20:42:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 20:42:41] 2.13.1.0 320486 3530 50136 153258 2 89 3650800 4096001 1147 130560 0 3436003 99.847 416527 577 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-11-24 20:42:41] CVMFS is ok
[2025-11-24 20:42:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 20:42:41] Checking for apptainer binary...
[2025-11-24 20:42:41] apptainer is not installed, using version from CVMFS
[2025-11-24 20:42:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 20:42:41] ryzen4700s
[2025-11-24 20:42:41] apptainer works
[2025-11-24 20:42:41] Set ATHENA_PROC_NUMBER=12
[2025-11-24 20:42:41] Set ATHENA_CORE_NUMBER=12
[2025-11-24 20:42:41] Starting ATLAS job with PandaID=6893852460
[2025-11-24 20:42:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 08:24:11]  *** The last 200 lines of the pilot log: ***
[2025-11-25 08:24:11] 2025-11-25 08:23:15,594 | INFO     | mean x: 1764037987.8403482
[2025-11-25 08:24:11] 2025-11-25 08:23:15,594 | INFO     | mean y: 3471769.8592162556
[2025-11-25 08:24:11] 2025-11-25 08:23:15,594 | INFO     | intersect: -19478200760.35635
[2025-11-25 08:24:11] 2025-11-25 08:23:15,594 | INFO     | chi2: 6.099943382453722
[2025-11-25 08:24:11] 2025-11-25 08:23:15,595 | INFO     | sum of square deviations: 99231816776.3799
[2025-11-25 08:24:11] 2025-11-25 08:23:15,603 | INFO     | sum of deviations: 1391696272724.0444
[2025-11-25 08:24:11] 2025-11-25 08:23:15,604 | INFO     | mean x: 1764037835.3538013
[2025-11-25 08:24:11] 2025-11-25 08:23:15,604 | INFO     | mean y: 3490653.9254385964
[2025-11-25 08:24:11] 2025-11-25 08:23:15,604 | INFO     | intersect: -24736607433.14738
[2025-11-25 08:24:11] 2025-11-25 08:23:15,605 | INFO     | chi2: 3.0260694057375037
[2025-11-25 08:24:11] 2025-11-25 08:23:15,605 | INFO     | current chi2=3.0260694057375037 (change=50.39184438265626 %)
[2025-11-25 08:24:11] 2025-11-25 08:23:15,606 | INFO     | sum of square deviations: 97071916744.8042
[2025-11-25 08:24:11] 2025-11-25 08:23:15,614 | INFO     | sum of deviations: 1505191255727.4646
[2025-11-25 08:24:11] 2025-11-25 08:23:15,614 | INFO     | mean x: 1764037682.8659794
[2025-11-25 08:24:11] 2025-11-25 08:23:15,614 | INFO     | mean y: 3498656.565537555
[2025-11-25 08:24:11] 2025-11-25 08:23:15,614 | INFO     | intersect: -27349562703.127163
[2025-11-25 08:24:11] 2025-11-25 08:23:15,615 | INFO     | chi2: 2.313231310493111
[2025-11-25 08:24:11] 2025-11-25 08:23:15,615 | INFO     | current chi2=2.313231310493111 (change=23.556567932408754 %)
[2025-11-25 08:24:11] 2025-11-25 08:23:15,615 | INFO     | right removable region: 678
[2025-11-25 08:24:11] 2025-11-25 08:23:15,615 | INFO     | sum of square deviations: 99231168779.4896
[2025-11-25 08:24:11] 2025-11-25 08:23:15,629 | INFO     | sum of deviations: 908910619754.8546
[2025-11-25 08:24:11] 2025-11-25 08:23:15,630 | INFO     | mean x: 1764038140.3494153
[2025-11-25 08:24:11] 2025-11-25 08:23:15,630 | INFO     | mean y: 3486431.013157895
[2025-11-25 08:24:11] 2025-11-25 08:23:15,630 | INFO     | intersect: -16154269434.778786
[2025-11-25 08:24:11] 2025-11-25 08:23:15,630 | INFO     | chi2: 4.113848983516742
[2025-11-25 08:24:11] 2025-11-25 08:23:15,631 | INFO     | current chi2=4.113848983516742 (change=32.55922677331584 %)
[2025-11-25 08:24:11] 2025-11-25 08:23:15,632 | INFO     | sum of square deviations: 97070996762.0708
[2025-11-25 08:24:11] 2025-11-25 08:23:15,640 | INFO     | sum of deviations: 833861090104.5903
[2025-11-25 08:24:11] 2025-11-25 08:23:15,640 | INFO     | mean x: 1764038292.8468335
[2025-11-25 08:24:11] 2025-11-25 08:23:15,640 | INFO     | mean y: 3491727.5537555227
[2025-11-25 08:24:11] 2025-11-25 08:23:15,640 | INFO     | intersect: -15149982975.760101
[2025-11-25 08:24:11] 2025-11-25 08:23:15,641 | INFO     | chi2: 3.9984621186895923
[2025-11-25 08:24:11] 2025-11-25 08:23:15,641 | INFO     | current chi2=3.9984621186895923 (change=2.8048395867101195 %)
[2025-11-25 08:24:11] 2025-11-25 08:23:15,641 | INFO     | left removable region: 20
[2025-11-25 08:24:11] 2025-11-25 08:23:15,642 | INFO     | sum of square deviations: 88340659857.4892
[2025-11-25 08:24:11] 2025-11-25 08:23:15,649 | INFO     | sum of deviations: 1128767892609.9578
[2025-11-25 08:24:11] 2025-11-25 08:23:15,650 | INFO     | mean x: 1764038262.3829787
[2025-11-25 08:24:11] 2025-11-25 08:23:15,650 | INFO     | mean y: 3527397.889057751
[2025-11-25 08:24:11] 2025-11-25 08:23:15,650 | INFO     | intersect: -22536373878.89047
[2025-11-25 08:24:11] 2025-11-25 08:23:15,651 | INFO     | sufficient remaining disk space (101722357760 B)
[2025-11-25 08:24:11] 2025-11-25 08:23:15,651 | INFO     | chi2: 0.10078673527537943
[2025-11-25 08:24:11] 2025-11-25 08:23:15,652 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-11-25 08:24:11] 2025-11-25 08:23:15,652 | INFO     | current memory leak: 12.78 B/s (using 658 data points, chi2=0.10)
[2025-11-25 08:24:11] 2025-11-25 08:23:15,653 | INFO     | could have reported an average CPU frequency of 3643 MHz (26 samples)
[2025-11-25 08:24:11] 2025-11-25 08:23:15,653 | INFO     | ..............................
[2025-11-25 08:24:11] 2025-11-25 08:23:15,654 | INFO     | . Timing measurements:
[2025-11-25 08:24:11] 2025-11-25 08:23:15,654 | INFO     | . get job = 0 s
[2025-11-25 08:24:11] 2025-11-25 08:23:15,654 | INFO     | . initial setup = 1 s
[2025-11-25 08:24:11] 2025-11-25 08:23:15,654 | INFO     | . payload setup = 5 s
[2025-11-25 08:24:11] 2025-11-25 08:23:15,654 | INFO     | . stage-in = 0 s
[2025-11-25 08:24:11] 2025-11-25 08:23:15,654 | INFO     | . payload execution = 41989 s
[2025-11-25 08:24:11] 2025-11-25 08:23:15,654 | INFO     | . stage-out = 2 s
[2025-11-25 08:24:11] 2025-11-25 08:23:15,654 | INFO     | . log creation = 0 s
[2025-11-25 08:24:11] 2025-11-25 08:23:15,654 | INFO     | ..............................
[2025-11-25 08:24:11] 2025-11-25 08:23:15,735 | INFO     | size of work directory /opt/boinc/instance_homes/boinc_31418/slots/0/PanDA_Pilot-6893852460: 10762099 B (within 2537553920 B limit)
[2025-11-25 08:24:11] 2025-11-25 08:23:15,735 | INFO     | pfn file=/opt/boinc/instance_homes/boinc_31418/slots/0/PanDA_Pilot-6893852460/HITS.47523449._003836.pool.root.1 does not exist (skip from workdir size calculation)
[2025-11-25 08:24:11] 2025-11-25 08:23:15,735 | INFO     | total size of present files: 0 B (workdir size: 10762099 B)
[2025-11-25 08:24:11] 2025-11-25 08:23:15,735 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31418/slots/0/PanDA_Pilot-6893852460/HITS.47523449._003836.pool.root.1 since it does n
[2025-11-25 08:24:11] 2025-11-25 08:23:15,844 | INFO     | number of running child processes to parent process 1515850: 1
[2025-11-25 08:24:11] 2025-11-25 08:23:15,845 | INFO     | maximum number of monitored processes: 20
[2025-11-25 08:24:11] 2025-11-25 08:23:15,845 | INFO     | aborting job monitoring since job object (job id=6893852460) has expired
[2025-11-25 08:24:11] 2025-11-25 08:23:15,992 | INFO     | time since job start (42022s) is within the limit (172800.0s)
[2025-11-25 08:24:11] 2025-11-25 08:23:16,199 | INFO     | 
[2025-11-25 08:24:11] 2025-11-25 08:23:16,199 | INFO     | job summary report
[2025-11-25 08:24:11] 2025-11-25 08:23:16,199 | INFO     | --------------------------------------------------
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | PanDA job id: 6893852460
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | task id: 47523449
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | errors: (none)
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | pilot state: finished 
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | transexitcode: 0
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | exeerrorcode: 0
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | exeerrordiag: 
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | exitcode: 0
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | exitmsg: OK
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | cpuconsumptiontime: 223290 s
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | nevents: 1000
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | neventsw: 0
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | pid: 1515850
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | pgrp: 1515850
[2025-11-25 08:24:11] 2025-11-25 08:23:16,200 | INFO     | corecount: 12
[2025-11-25 08:24:11] 2025-11-25 08:23:16,201 | INFO     | event service: False
[2025-11-25 08:24:11] 2025-11-25 08:23:16,201 | INFO     | sizes: {0: 2283482, 1: 2284361, 6: 2284623, 12: 2284651, 41996: 2328544, 41999: 2337584, 42001: 2337768, 42006: 2338014}
[2025-11-25 08:24:11] 2025-11-25 08:23:16,201 | INFO     | --------------------------------------------------
[2025-11-25 08:24:11] 2025-11-25 08:23:16,201 | INFO     | 
[2025-11-25 08:24:11] 2025-11-25 08:23:16,201 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/0
[2025-11-25 08:24:11] 2025-11-25 08:23:16,220 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,222 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,222 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 08:24:11] 2025-11-25 08:23:16,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,222 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 08:24:11] 2025-11-25 08:23:16,222 | INFO     | job 6893852460 has completed (purged errors)
[2025-11-25 08:24:11] 2025-11-25 08:23:16,222 | INFO     | overall cleanup function is called
[2025-11-25 08:24:11] 2025-11-25 08:23:17,240 | INFO     | --- collectZombieJob: --- 10, [1515850]
[2025-11-25 08:24:11] 2025-11-25 08:23:17,240 | INFO     | zombie collector waiting for pid 1515850
[2025-11-25 08:24:11] 2025-11-25 08:23:17,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 08:24:11] 2025-11-25 08:23:17,240 | INFO     | collected zombie processes
[2025-11-25 08:24:11] 2025-11-25 08:23:17,241 | INFO     | will attempt to kill all subprocesses of pid=1515850
[2025-11-25 08:24:11] 2025-11-25 08:23:17,353 | INFO     | process IDs to be killed: [1515850] (in reverse order)
[2025-11-25 08:24:11] 2025-11-25 08:23:17,400 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 08:24:11] 2025-11-25 08:23:17,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 08:24:11] 2025-11-25 08:23:17,404 | INFO     | did not find any defunct processes belonging to 1515850
[2025-11-25 08:24:11] 2025-11-25 08:23:17,407 | INFO     | did not find any defunct processes belonging to 1515850
[2025-11-25 08:24:11] 2025-11-25 08:23:17,409 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 08:24:11] 2025-11-25 08:23:17,409 | INFO     | ready for new job
[2025-11-25 08:24:11] 2025-11-25 08:23:17,409 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 08:24:11] 2025-11-25 08:23:17,413 | INFO     | ***************************************
[2025-11-25 08:24:11] 2025-11-25 08:23:17,413 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 08:24:11] 2025-11-25 08:23:17,413 | INFO     | ***************************************
[2025-11-25 08:24:11] 2025-11-25 08:23:17,413 | INFO     | 
[2025-11-25 08:24:11] 2025-11-25 08:23:17,437 | INFO     | architecture information:
[2025-11-25 08:24:11] 2025-11-25 08:23:17,438 | INFO     | executing command: cat /etc/os-release
[2025-11-25 08:24:11] 2025-11-25 08:23:17,452 | INFO     | cat /etc/os-release:
[2025-11-25 08:24:11] NAME="CentOS Linux"
[2025-11-25 08:24:11] VERSION="7 (Core)"
[2025-11-25 08:24:11] ID="centos"
[2025-11-25 08:24:11] ID_LIKE="rhel fedora"
[2025-11-25 08:24:11] VERSION_ID="7"
[2025-11-25 08:24:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 08:24:11] ANSI_COLOR="0;31"
[2025-11-25 08:24:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 08:24:11] HOME_URL="https://www.centos.org/"
[2025-11-25 08:24:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 08:24:11] 
[2025-11-25 08:24:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 08:24:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 08:24:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 08:24:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 08:24:11] 
[2025-11-25 08:24:11] 2025-11-25 08:23:17,453 | INFO     | ***************************************
[2025-11-25 08:24:11] 2025-11-25 08:23:17,956 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/0
[2025-11-25 08:24:11] 2025-11-25 08:23:17,971 | INFO     | sufficient remaining disk space (101722357760 B)
[2025-11-25 08:24:11] 2025-11-25 08:23:17,972 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 08:24:11] 2025-11-25 08:23:17,972 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 08:24:11] 2025-11-25 08:23:17,972 | INFO     | update_server=False
[2025-11-25 08:24:11] 2025-11-25 08:23:17,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 08:24:11] 2025-11-25 08:23:17,972 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 08:24:11] 2025-11-25 08:23:17,972 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 08:24:11] 2025-11-25 08:23:17,973 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 08:24:11] 2025-11-25 08:23:17,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 08:24:11] 2025-11-25 08:23:17,973 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 08:24:11] 2025-11-25 08:23:17,999 | INFO     | all job control threads have been joined
[2025-11-25 08:24:11] 2025-11-25 08:23:18,348 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 08:24:11] 2025-11-25 08:23:18,348 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 08:24:11] 2025-11-25 08:23:18,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:24:11] 2025-11-25 08:23:18,348 | INFO     | will abort loop
[2025-11-25 08:24:11] 2025-11-25 08:23:18,440 | INFO     | all data control threads have been joined
[2025-11-25 08:24:11] 2025-11-25 08:23:18,976 | INFO     | [job] retrieve thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:19,000 | INFO     | [job] control thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:19,352 | INFO     | [job] job monitor thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:19,371 | INFO     | all payload control threads have been joined
[2025-11-25 08:24:11] 2025-11-25 08:23:19,444 | INFO     | [data] control thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:19,476 | INFO     | [job] validate thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:19,708 | INFO     | [payload] validate_post thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:19,740 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:19,868 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:19,976 | INFO     | [data] copytool_out thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:19,992 | INFO     | [data] copytool_in thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:20,236 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:20,316 | INFO     | [payload] failed_post thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:20,376 | INFO     | [payload] control thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:20,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:24:11] 2025-11-25 08:23:20,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 08:24:11] 2025-11-25 08:23:21,744 | INFO     | [job] queue monitor thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:24,864 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:23:28,320 | INFO     | job.realtimelogging is not enabled
[2025-11-25 08:24:11] 2025-11-25 08:23:29,325 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 08:24:11] 2025-11-25 08:24:03,396 | INFO     | [monitor] cgroup control has ended
[2025-11-25 08:24:11] 2025-11-25 08:24:05,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139621307397952)>', '<ExcThread(monitor, started 139620729747200)>']
[2025-11-25 08:24:11] 2025-11-25 08:24:06,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 08:24:11] 2025-11-25 08:24:06,172 | INFO     | [monitor] control thread has ended
[2025-11-25 08:24:11] 2025-11-25 08:24:10,320 | INFO     | all workflow threads have been joined
[2025-11-25 08:24:11] 2025-11-25 08:24:10,320 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 08:24:11] 2025-11-25 08:24:10,321 | INFO     | traces error code: 0
[2025-11-25 08:24:11] 2025-11-25 08:24:10,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 08:24:11] 2025-11-25 08:24:10,651 [wrapper] ==== pilot stdout END ====
[2025-11-25 08:24:11] 2025-11-25 08:24:10,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 08:24:11] 2025-11-25 08:24:10,658 [wrapper] pilotpid: 1509258
[2025-11-25 08:24:11] 2025-11-25 08:24:10,660 [wrapper] Pilot exit status: 0
[2025-11-25 08:24:11] 2025-11-25 08:24:10,703 [wrapper] pandaids: 6893852460
[2025-11-25 08:24:11] 2025-11-25 08:24:10,733 [wrapper] cleanup supervisor_pilot 1707216 1509259
[2025-11-25 08:24:11] 2025-11-25 08:24:10,737 [wrapper] Test setup, not cleaning
[2025-11-25 08:24:11] 2025-11-25 08:24:10,739 [wrapper] apfmon messages muted
[2025-11-25 08:24:11] 2025-11-25 08:24:10,742 [wrapper] ==== wrapper stdout END ====
[2025-11-25 08:24:11] 2025-11-25 08:24:10,746 [wrapper] ==== wrapper stderr END ====
[2025-11-25 08:24:11]  *** Error codes and diagnostics ***
[2025-11-25 08:24:11]     "exeErrorCode": 0,
[2025-11-25 08:24:11]     "exeErrorDiag": "",
[2025-11-25 08:24:11]     "pilotErrorCode": 0,
[2025-11-25 08:24:11]     "pilotErrorDiag": "",
[2025-11-25 08:24:11]  *** Listing of results directory ***
[2025-11-25 08:24:11] total 1329376
[2025-11-25 08:24:11] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:54 pilot3.tar.gz
[2025-11-25 08:24:11] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:58 queuedata.json
[2025-11-25 08:24:11] -rwx------ 1 boinc boinc     36292 Nov 20 11:59 runpilot2-wrapper.sh
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc       100 Nov 24 20:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 08:24:11] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 20:42 run_atlas
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc       105 Nov 24 20:42 job.xml
[2025-11-25 08:24:11] -rw-r--r-- 2 boinc boinc 411839775 Nov 24 20:42 EVNT.47493127._000384.pool.root.1
[2025-11-25 08:24:11] drwxrwx--x 2 boinc boinc      4096 Nov 24 20:42 shared
[2025-11-25 08:24:11] -rw-r--r-- 2 boinc boinc    590107 Nov 24 20:42 input.tar.gz
[2025-11-25 08:24:11] -rw-r--r-- 2 boinc boinc     15847 Nov 24 20:42 start_atlas.sh
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc      8971 Nov 24 20:42 init_data.xml
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc         0 Nov 24 20:42 boinc_setup_complete
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc         0 Nov 24 20:42 boinc_lockfile
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc      2786 Nov 24 20:42 pandaJob.out
[2025-11-25 08:24:11] -rw------- 1 boinc boinc    991801 Nov 24 20:42 agis_schedconf.cvmfs.json
[2025-11-25 08:24:11] drwx------ 5 boinc boinc      4096 Nov 24 20:42 pilot3
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc       532 Nov 25 08:10 boinc_task_state.xml
[2025-11-25 08:24:11] -rw------- 1 boinc boinc 928826851 Nov 25 08:22 HITS.47523449._003836.pool.root.1
[2025-11-25 08:24:11] -rw------- 1 boinc boinc        95 Nov 25 08:22 pilot_heartbeat.json
[2025-11-25 08:24:11] -rw------- 1 boinc boinc      1058 Nov 25 08:23 memory_monitor_summary.json
[2025-11-25 08:24:11] -rw------- 1 boinc boinc   1516227 Nov 25 08:23 agis_ddmendpoints.agis.ALL.json
[2025-11-25 08:24:11] -rw------- 1 boinc boinc   2383072 Nov 25 08:23 log.47523449._003836.job.log.tgz.1
[2025-11-25 08:24:11] -rw------- 1 boinc boinc      8626 Nov 25 08:23 heartbeat.json
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc        29 Nov 25 08:24 wrapper_checkpoint.txt
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc      8192 Nov 25 08:24 boinc_mmap_file
[2025-11-25 08:24:11] -rw------- 1 boinc boinc      4834 Nov 25 08:24 pilotlog.txt
[2025-11-25 08:24:11] -rw------- 1 boinc boinc   5962556 Nov 25 08:24 log.47523449._003836.job.log.1
[2025-11-25 08:24:11] -rw------- 1 boinc boinc       353 Nov 25 08:24 output.list
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc       620 Nov 25 08:24 runtime_log
[2025-11-25 08:24:11] -rw------- 1 boinc boinc   8366080 Nov 25 08:24 result.tar.gz
[2025-11-25 08:24:11] -rw------- 1 boinc boinc       667 Nov 25 08:24 wu5MDmqUIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLhHKDmX6EnQo.diag
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc      9178 Nov 25 08:24 runtime_log.err
[2025-11-25 08:24:11] -rw-rw-r-- 1 boinc boinc     21379 Nov 25 08:24 stderr.txt
[2025-11-25 08:24:11] HITS file was successfully produced:
[2025-11-25 08:24:11] -rw------- 1 boinc boinc 928826851 Nov 25 08:22 shared/HITS.pool.root.1
[2025-11-25 08:24:11]  *** Contents of shared directory: ***
[2025-11-25 08:24:11] total 1318024
[2025-11-25 08:24:11] -rw-r--r-- 2 boinc boinc 411839775 Nov 24 20:42 ATLAS.root_0
[2025-11-25 08:24:11] -rw-r--r-- 2 boinc boinc    590107 Nov 24 20:42 input.tar.gz
[2025-11-25 08:24:11] -rw-r--r-- 2 boinc boinc     15847 Nov 24 20:42 start_atlas.sh
[2025-11-25 08:24:11] -rw------- 1 boinc boinc 928826851 Nov 25 08:22 HITS.pool.root.1
[2025-11-25 08:24:11] -rw------- 1 boinc boinc   8366080 Nov 25 08:24 result.tar.gz
08:24:13 (1505453): run_atlas exited; CPU time 222912.243812
08:24:13 (1505453): called boinc_finish(0)

</stderr_txt>
]]>

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