Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:07:15 (19693): wrapper (7.7.26015): starting
03:07:15 (19693): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 03:07:15] Arguments: --nthreads 8
[2025-11-25 03:07:15] Threads: 8
[2025-11-25 03:07:15] Checking for CVMFS
[2025-11-25 03:07:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 03:07:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 03:07:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 03:07:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 03:07:15] 2.11.2.0 20636 283328 135868 153265 1 129 15979552 25165824 1058 130560 11 124023849 99.885 73491716 2639 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 03:07:15] CVMFS is ok
[2025-11-25 03:07:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 03:07:15] Checking for apptainer binary...
[2025-11-25 03:07:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 03:07:15] Running /usr/bin/apptainer --version
[2025-11-25 03:07:15] apptainer version 1.3.2-1.el7
[2025-11-25 03:07:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 03:07:17] cg-vwn312.simple-grid.lan
[2025-11-25 03:07:17] apptainer works
[2025-11-25 03:07:17] Set ATHENA_PROC_NUMBER=8
[2025-11-25 03:07:17] Set ATHENA_CORE_NUMBER=8
[2025-11-25 03:07:17] Starting ATLAS job with PandaID=6895331237
[2025-11-25 03:07:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:24:12]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:24:12] 2025-11-26 01:22:52,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:24:12] 2025-11-26 01:22:52,764 | INFO     | time since job start (83716s) is within the limit (172800.0s)
[2025-11-26 02:24:12] 2025-11-26 01:22:54,772 | INFO     | time since job start (83718s) is within the limit (172800.0s)
[2025-11-26 02:24:12] 2025-11-26 01:22:54,927 | INFO     | monitor loop #5591: job 0:6895331237 is in state 'finished'
[2025-11-26 02:24:12] 2025-11-26 01:22:54,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:24:12] 2025-11-26 01:22:56,779 | INFO     | time since job start (83720s) is within the limit (172800.0s)
[2025-11-26 02:24:12] 2025-11-26 01:22:57,433 | INFO     | monitor loop #5592: job 0:6895331237 is in state 'finished'
[2025-11-26 02:24:12] 2025-11-26 01:22:57,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:24:12] 2025-11-26 01:22:58,787 | INFO     | time since job start (83722s) is within the limit (172800.0s)
[2025-11-26 02:24:12] 2025-11-26 01:22:59,940 | INFO     | monitor loop #5593: job 0:6895331237 is in state 'finished'
[2025-11-26 02:24:12] 2025-11-26 01:22:59,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:24:12] 2025-11-26 01:23:00,796 | INFO     | time since job start (83724s) is within the limit (172800.0s)
[2025-11-26 02:24:12] 2025-11-26 01:23:02,260 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 02:24:12] 2025-11-26 01:23:02,263 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 02:24:12] 2025-11-26 01:23:02,266 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6895331237/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:24:12] 2025-11-26 01:23:02,267 | INFO     | extracted standard info from prmon json
[2025-11-26 02:24:12] 2025-11-26 01:23:02,267 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:24:12] 2025-11-26 01:23:02,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:24:12] 2025-11-26 01:23:02,310 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:24:12] 2025-11-26 01:23:02,312 | INFO     | sum of square deviations: 797333198564.353
[2025-11-26 02:24:12] 2025-11-26 01:23:02,405 | INFO     | sum of deviations: 1177692392742.693
[2025-11-26 02:24:12] 2025-11-26 01:23:02,406 | INFO     | mean x: 1764078252.7262774
[2025-11-26 02:24:12] 2025-11-26 01:23:02,406 | INFO     | mean y: 2849751.9751824816
[2025-11-26 02:24:12] 2025-11-26 01:23:02,406 | INFO     | intersect: -2602762985.810349
[2025-11-26 02:24:12] 2025-11-26 01:23:02,408 | INFO     | chi2: 19.586372534460796
[2025-11-26 02:24:12] 2025-11-26 01:23:02,410 | INFO     | sum of square deviations: 788635603684.3081
[2025-11-26 02:24:12] 2025-11-26 01:23:02,458 | INFO     | monitor loop #5594: job 0:6895331237 is in state 'finished'
[2025-11-26 02:24:12] 2025-11-26 01:23:02,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:24:12] 2025-11-26 01:23:02,471 | INFO     | sum of deviations: 1633887736375.308
[2025-11-26 02:24:12] 2025-11-26 01:23:02,471 | INFO     | mean x: 1764078100.2307692
[2025-11-26 02:24:12] 2025-11-26 01:23:02,472 | INFO     | mean y: 2857749.630769231
[2025-11-26 02:24:12] 2025-11-26 01:23:02,472 | INFO     | intersect: -3651942465.4621015
[2025-11-26 02:24:12] 2025-11-26 01:23:02,473 | INFO     | chi2: 16.247628723352154
[2025-11-26 02:24:12] 2025-11-26 01:23:02,474 | INFO     | current chi2=16.247628723352154 (change=17.04625910302873 %)
[2025-11-26 02:24:12] 2025-11-26 01:23:02,474 | INFO     | right removable region: 1364
[2025-11-26 02:24:12] 2025-11-26 01:23:02,476 | INFO     | sum of square deviations: 788634578884.3068
[2025-11-26 02:24:12] 2025-11-26 01:23:02,546 | INFO     | sum of deviations: 772465155739.5383
[2025-11-26 02:24:12] 2025-11-26 01:23:02,546 | INFO     | mean x: 1764078405.2307692
[2025-11-26 02:24:12] 2025-11-26 01:23:02,547 | INFO     | mean y: 2856852.6681318684
[2025-11-26 02:24:12] 2025-11-26 01:23:02,547 | INFO     | intersect: -1725052544.8137276
[2025-11-26 02:24:12] 2025-11-26 01:23:02,549 | INFO     | chi2: 17.26164063251753
[2025-11-26 02:24:12] 2025-11-26 01:23:02,549 | INFO     | current chi2=17.26164063251753 (change=11.869129405422418 %)
[2025-11-26 02:24:12] 2025-11-26 01:23:02,549 | INFO     | left removable region: 10
[2025-11-26 02:24:12] 2025-11-26 01:23:02,551 | INFO     | sum of square deviations: 769722249739.4475
[2025-11-26 02:24:12] 2025-11-26 01:23:02,630 | INFO     | sum of deviations: 1242763800007.2207
[2025-11-26 02:24:12] 2025-11-26 01:23:02,631 | INFO     | mean x: 1764078374.7385523
[2025-11-26 02:24:12] 2025-11-26 01:23:02,631 | INFO     | mean y: 2868288.562776957
[2025-11-26 02:24:12] 2025-11-26 01:23:02,631 | INFO     | intersect: -2845344485.905876
[2025-11-26 02:24:12] 2025-11-26 01:23:02,633 | INFO     | chi2: 13.034344617831893
[2025-11-26 02:24:12] 2025-11-26 01:23:02,633 | INFO     | current memory leak: 1.61 B/s (using 1354 data points, chi2=13.03)
[2025-11-26 02:24:12] 2025-11-26 01:23:02,635 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-26 02:24:12] 2025-11-26 01:23:02,635 | INFO     | ..............................
[2025-11-26 02:24:12] 2025-11-26 01:23:02,635 | INFO     | . Timing measurements:
[2025-11-26 02:24:12] 2025-11-26 01:23:02,636 | INFO     | . get job = 0 s
[2025-11-26 02:24:12] 2025-11-26 01:23:02,636 | INFO     | . initial setup = 2 s
[2025-11-26 02:24:12] 2025-11-26 01:23:02,636 | INFO     | . payload setup = 11 s
[2025-11-26 02:24:12] 2025-11-26 01:23:02,636 | INFO     | . stage-in = 0 s
[2025-11-26 02:24:12] 2025-11-26 01:23:02,636 | INFO     | . payload execution = 83572 s
[2025-11-26 02:24:12] 2025-11-26 01:23:02,636 | INFO     | . stage-out = 5 s
[2025-11-26 02:24:12] 2025-11-26 01:23:02,636 | INFO     | . log creation = 2 s
[2025-11-26 02:24:12] 2025-11-26 01:23:02,636 | INFO     | ..............................
[2025-11-26 02:24:12] 2025-11-26 01:23:02,766 | INFO     | 
[2025-11-26 02:24:12] 2025-11-26 01:23:02,766 | INFO     | job summary report
[2025-11-26 02:24:12] 2025-11-26 01:23:02,767 | INFO     | --------------------------------------------------
[2025-11-26 02:24:12] 2025-11-26 01:23:02,767 | INFO     | PanDA job id: 6895331237
[2025-11-26 02:24:12] 2025-11-26 01:23:02,767 | INFO     | task id: 47556137
[2025-11-26 02:24:12] 2025-11-26 01:23:02,767 | INFO     | errors: (none)
[2025-11-26 02:24:12] 2025-11-26 01:23:02,767 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:24:12] 2025-11-26 01:23:02,767 | INFO     | pilot state: finished 
[2025-11-26 02:24:12] 2025-11-26 01:23:02,767 | INFO     | transexitcode: 0
[2025-11-26 02:24:12] 2025-11-26 01:23:02,767 | INFO     | exeerrorcode: 0
[2025-11-26 02:24:12] 2025-11-26 01:23:02,767 | INFO     | exeerrordiag: 
[2025-11-26 02:24:12] 2025-11-26 01:23:02,768 | INFO     | exitcode: 0
[2025-11-26 02:24:12] 2025-11-26 01:23:02,768 | INFO     | exitmsg: OK
[2025-11-26 02:24:12] 2025-11-26 01:23:02,768 | INFO     | cpuconsumptiontime: 338188 s
[2025-11-26 02:24:12] 2025-11-26 01:23:02,768 | INFO     | nevents: 1000
[2025-11-26 02:24:12] 2025-11-26 01:23:02,768 | INFO     | neventsw: 0
[2025-11-26 02:24:12] 2025-11-26 01:23:02,768 | INFO     | pid: 29914
[2025-11-26 02:24:12] 2025-11-26 01:23:02,768 | INFO     | pgrp: 29914
[2025-11-26 02:24:12] 2025-11-26 01:23:02,768 | INFO     | corecount: 8
[2025-11-26 02:24:12] 2025-11-26 01:23:02,768 | INFO     | event service: False
[2025-11-26 02:24:12] 2025-11-26 01:23:02,768 | INFO     | sizes: {0: 2283481, 1: 2284337, 2: 2284337, 8: 2284627, 12: 2284655, 83587: 2344987, 83594: 2354042, 83708: 2354232}
[2025-11-26 02:24:12] 2025-11-26 01:23:02,769 | INFO     | --------------------------------------------------
[2025-11-26 02:24:12] 2025-11-26 01:23:02,769 | INFO     | 
[2025-11-26 02:24:12] 2025-11-26 01:23:02,769 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-26 02:24:12] 2025-11-26 01:23:02,804 | INFO     | time since job start (83726s) is within the limit (172800.0s)
[2025-11-26 02:24:12] 2025-11-26 01:23:03,335 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,336 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,336 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:24:12] 2025-11-26 01:23:03,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,337 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:24:12] 2025-11-26 01:23:03,338 | INFO     | job 6895331237 has completed (purged errors)
[2025-11-26 02:24:12] 2025-11-26 01:23:03,338 | INFO     | overall cleanup function is called
[2025-11-26 02:24:12] 2025-11-26 01:23:04,360 | INFO     | --- collectZombieJob: --- 10, [29914]
[2025-11-26 02:24:12] 2025-11-26 01:23:04,360 | INFO     | zombie collector waiting for pid 29914
[2025-11-26 02:24:12] 2025-11-26 01:23:04,360 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:24:12] 2025-11-26 01:23:04,361 | INFO     | collected zombie processes
[2025-11-26 02:24:12] 2025-11-26 01:23:04,361 | INFO     | will attempt to kill all subprocesses of pid=29914
[2025-11-26 02:24:12] 2025-11-26 01:23:04,451 | INFO     | process IDs to be killed: [29914] (in reverse order)
[2025-11-26 02:24:12] 2025-11-26 01:23:05,300 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:24:12] 2025-11-26 01:23:05,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:24:12] 2025-11-26 01:23:05,302 | INFO     | did not find any defunct processes belonging to 29914
[2025-11-26 02:24:12] 2025-11-26 01:23:05,304 | INFO     | did not find any defunct processes belonging to 29914
[2025-11-26 02:24:12] 2025-11-26 01:23:05,357 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:24:12] 2025-11-26 01:23:05,358 | INFO     | ready for new job
[2025-11-26 02:24:12] 2025-11-26 01:23:05,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:24:12] 2025-11-26 01:23:05,363 | INFO     | ***************************************
[2025-11-26 02:24:12] 2025-11-26 01:23:05,363 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:24:12] 2025-11-26 01:23:05,363 | INFO     | ***************************************
[2025-11-26 02:24:12] 2025-11-26 01:23:05,363 | INFO     | 
[2025-11-26 02:24:12] 2025-11-26 01:23:05,364 | INFO     | pilot is running in a VM
[2025-11-26 02:24:12] 2025-11-26 01:23:05,364 | INFO     | architecture information:
[2025-11-26 02:24:12] 2025-11-26 01:23:05,380 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:24:12] 2025-11-26 01:23:05,591 | INFO     | cat /etc/os-release:
[2025-11-26 02:24:12] NAME="CentOS Linux"
[2025-11-26 02:24:12] VERSION="7 (Core)"
[2025-11-26 02:24:12] ID="centos"
[2025-11-26 02:24:12] ID_LIKE="rhel fedora"
[2025-11-26 02:24:12] VERSION_ID="7"
[2025-11-26 02:24:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:24:12] ANSI_COLOR="0;31"
[2025-11-26 02:24:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:24:12] HOME_URL="https://www.centos.org/"
[2025-11-26 02:24:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:24:12] 
[2025-11-26 02:24:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:24:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:24:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:24:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:24:12] 
[2025-11-26 02:24:12] 2025-11-26 01:23:05,591 | INFO     | ***************************************
[2025-11-26 02:24:12] 2025-11-26 01:23:06,094 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-26 02:24:12] 2025-11-26 01:23:06,449 | INFO     | sufficient remaining disk space (494236860416 B)
[2025-11-26 02:24:12] 2025-11-26 01:23:06,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:24:12] 2025-11-26 01:23:06,450 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:24:12] 2025-11-26 01:23:06,450 | INFO     | update_server=False
[2025-11-26 02:24:12] 2025-11-26 01:23:06,450 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:24:12] 2025-11-26 01:23:06,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:24:12] 2025-11-26 01:23:06,451 | INFO     | aborting loop
[2025-11-26 02:24:12] 2025-11-26 01:23:07,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:24:12] 2025-11-26 01:23:07,130 | INFO     | all payload control threads have been joined
[2025-11-26 02:24:12] 2025-11-26 01:23:07,339 | INFO     | all data control threads have been joined
[2025-11-26 02:24:12] 2025-11-26 01:23:07,363 | INFO     | all job control threads have been joined
[2025-11-26 02:24:12] 2025-11-26 01:23:07,456 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:07,457 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:07,515 | INFO     | [job] validate thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:07,529 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:07,581 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:07,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:24:12] 2025-11-26 01:23:07,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:24:12] 2025-11-26 01:23:08,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:08,136 | INFO     | [payload] control thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:08,263 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:08,345 | INFO     | [data] control thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:08,369 | INFO     | [job] control thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:08,507 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:08,796 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:08,856 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:08,914 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:09,034 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:11,620 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:24:12] 2025-11-26 01:23:35,928 | INFO     | PID=23444 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 02:24:12] 2025-11-26 01:23:35,929 | INFO     | .. there are 2 such processes running
[2025-11-26 02:24:12] 2025-11-26 01:23:35,930 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:24:12] 2025-11-26 01:23:35,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:24:12] 2025-11-26 01:23:35,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:24:12] 2025-11-26 01:23:50,533 [wrapper] supervise_pilot (15 min periods counter: 94)
[2025-11-26 02:24:12] 2025-11-26 01:24:01,624 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:24:12] 2025-11-26 01:24:02,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139743749691200)>', '<ExcThread(monitor, started 139742716876544)>']
[2025-11-26 02:24:12] 2025-11-26 01:24:03,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:24:12] 2025-11-26 01:24:03,091 | INFO     | [monitor] control thread has ended
[2025-11-26 02:24:12] 2025-11-26 01:24:07,614 | INFO     | all workflow threads have been joined
[2025-11-26 02:24:12] 2025-11-26 01:24:07,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:24:12] 2025-11-26 01:24:07,615 | INFO     | traces error code: 0
[2025-11-26 02:24:12] 2025-11-26 01:24:07,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:24:12] 2025-11-26 01:24:08,003 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:24:12] 2025-11-26 01:24:08,108 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:24:12] 2025-11-26 01:24:08,222 [wrapper] pilotpid: 23444
[2025-11-26 02:24:12] 2025-11-26 01:24:08,276 [wrapper] Pilot exit status: 0
[2025-11-26 02:24:12] 2025-11-26 01:24:08,752 [wrapper] pandaids: 6895331237
[2025-11-26 02:24:12] 2025-11-26 01:24:09,903 [wrapper] cleanup supervisor_pilot 18062 23445
[2025-11-26 02:24:12] 2025-11-26 01:24:09,972 [wrapper] Test setup, not cleaning
[2025-11-26 02:24:12] 2025-11-26 01:24:10,065 [wrapper] apfmon messages muted
[2025-11-26 02:24:12] 2025-11-26 01:24:10,124 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:24:12] 2025-11-26 01:24:10,219 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:24:12]  *** Error codes and diagnostics ***
[2025-11-26 02:24:12]     "exeErrorCode": 0,
[2025-11-26 02:24:12]     "exeErrorDiag": "",
[2025-11-26 02:24:12]     "pilotErrorCode": 0,
[2025-11-26 02:24:12]     "pilotErrorDiag": "",
[2025-11-26 02:24:12]  *** Listing of results directory ***
[2025-11-26 02:24:12] total 1321444
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc    576529 Nov 22 00:06 pilot3.tar.gz
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc      5112 Nov 22 00:14 queuedata.json
[2025-11-26 02:24:12] -rwx------. 1 boinc boinc     36292 Nov 22 00:19 runpilot2-wrapper.sh
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc       100 Nov 25 03:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:24:12] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 03:07 run_atlas
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc       105 Nov 25 03:07 job.xml
[2025-11-26 02:24:12] -rw-r--r--. 2 boinc boinc 407333890 Nov 25 03:07 EVNT.47483658._000165.pool.root.1
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc      6390 Nov 25 03:07 init_data.xml
[2025-11-26 02:24:12] -rw-r--r--. 2 boinc boinc     15847 Nov 25 03:07 start_atlas.sh
[2025-11-26 02:24:12] drwxrwx--x. 2 boinc boinc        68 Nov 25 03:07 shared
[2025-11-26 02:24:12] -rw-r--r--. 2 boinc boinc    590102 Nov 25 03:07 input.tar.gz
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc         0 Nov 25 03:07 boinc_lockfile
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc      2785 Nov 25 03:07 pandaJob.out
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc    991801 Nov 25 03:07 agis_schedconf.cvmfs.json
[2025-11-26 02:24:12] drwx------. 5 boinc boinc      4096 Nov 25 03:07 pilot3
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc       533 Nov 26 01:54 boinc_task_state.xml
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc 914620022 Nov 26 02:19 HITS.47556137._001649.pool.root.1
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc      1034 Nov 26 02:20 memory_monitor_summary.json
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc   1516240 Nov 26 02:21 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc   2455734 Nov 26 02:21 log.47556137._001649.job.log.tgz.1
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc      8631 Nov 26 02:23 heartbeat.json
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc        95 Nov 26 02:23 pilot_heartbeat.json
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc      8192 Nov 26 02:23 boinc_mmap_file
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc        29 Nov 26 02:23 wrapper_checkpoint.txt
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc      4884 Nov 26 02:24 pilotlog.txt
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc  11195722 Nov 26 02:24 log.47556137._001649.job.log.1
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc       353 Nov 26 02:24 output.list
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc       620 Nov 26 02:24 runtime_log
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc  13670400 Nov 26 02:24 result.tar.gz
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc      8817 Nov 26 02:24 runtime_log.err
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc       662 Nov 26 02:24 QyFNDmXapg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmolJKDm5GxjPo.diag
[2025-11-26 02:24:12] -rw-r--r--. 1 boinc boinc     21378 Nov 26 02:24 stderr.txt
[2025-11-26 02:24:12] HITS file was successfully produced:
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc 914620022 Nov 26 02:19 shared/HITS.pool.root.1
[2025-11-26 02:24:12]  *** Contents of shared directory: ***
[2025-11-26 02:24:12] total 1304920
[2025-11-26 02:24:12] -rw-r--r--. 2 boinc boinc 407333890 Nov 25 03:07 ATLAS.root_0
[2025-11-26 02:24:12] -rw-r--r--. 2 boinc boinc     15847 Nov 25 03:07 start_atlas.sh
[2025-11-26 02:24:12] -rw-r--r--. 2 boinc boinc    590102 Nov 25 03:07 input.tar.gz
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc 914620022 Nov 26 02:19 HITS.pool.root.1
[2025-11-26 02:24:12] -rw-------. 1 boinc boinc  13670400 Nov 26 02:24 result.tar.gz
02:24:14 (19693): run_atlas exited; CPU time 338336.892406
02:24:14 (19693): called boinc_finish(0)

</stderr_txt>
]]>

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