Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 09:32:48 (425807): vboxwrapper version 26210
2025-11-25 09:32:48 (425807): BOINC client version: 8.2.4
2025-11-25 09:32:49 (425807): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-11-25 09:32:49 (425807): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 09:32:49 (425807): Create VM. (boinc_f7b4bef1ef085783, slot#3)
2025-11-25 09:32:49 (425807): Setting Memory Size for VM. (4400MB)
2025-11-25 09:32:49 (425807): Setting CPU Count for VM. (4)
2025-11-25 09:32:49 (425807): Setting Chipset Options for VM.
2025-11-25 09:32:49 (425807): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 09:32:49 (425807): Setting Boot Options for VM.
2025-11-25 09:32:50 (425807): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 09:32:50 (425807): Enabling VM Network Access.
2025-11-25 09:32:50 (425807): Disabling USB Support for VM.
2025-11-25 09:32:50 (425807): Disabling COM Port Support for VM.
2025-11-25 09:32:50 (425807): Disabling LPT Port Support for VM.
2025-11-25 09:32:50 (425807): Disabling Audio Support for VM.
2025-11-25 09:32:50 (425807): Disabling Clipboard Support for VM.
2025-11-25 09:32:50 (425807): Disabling Drag and Drop Support for VM.
2025-11-25 09:32:50 (425807): Adding storage controller(s) to VM.
2025-11-25 09:32:51 (425807): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 09:32:51 (425807): Adding VirtualBox Guest Additions to VM.
2025-11-25 09:32:51 (425807): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 09:32:51 (425807): forwarding host port 48885 to guest port 80
2025-11-25 09:32:52 (425807): Enabling remote desktop for VM.
2025-11-25 09:32:52 (425807): Required extension pack not installed, remote desktop not enabled.
2025-11-25 09:32:52 (425807): Enabling shared directory for VM.
2025-11-25 09:32:52 (425807): Starting VM using VBoxManage interface. (boinc_f7b4bef1ef085783, slot#3)
2025-11-25 09:32:53 (425807): Successfully started VM. (PID = '426240')
2025-11-25 09:32:53 (425807): Reporting VM Process ID to BOINC.
2025-11-25 09:32:53 (425807): Guest Log: BIOS: VirtualBox 6.1.50
2025-11-25 09:32:53 (425807): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 09:32:53 (425807): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 09:32:53 (425807): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 09:32:53 (425807): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 09:32:53 (425807): Detected: Web Application Enabled (http://localhost:48885)
2025-11-25 09:32:53 (425807): Preference change detected
2025-11-25 09:32:53 (425807): Setting CPU throttle for VM. (100%)
2025-11-25 09:32:54 (425807): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 09:32:55 (425807): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 09:32:55 (425807): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 09:32:58 (425807): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 09:32:58 (425807): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 09:32:58 (425807): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 09:33:06 (425807): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 09:33:06 (425807): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-25 09:33:22 (425807): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 09:33:22 (425807): Guest Log: 00:00:00.000367 main     Log opened 2025-11-25T17:33:19.675782000Z
2025-11-25 09:33:22 (425807): Guest Log: 00:00:00.000571 main     OS Product: Linux
2025-11-25 09:33:22 (425807): Guest Log: 00:00:00.000690 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 09:33:22 (425807): Guest Log: 00:00:00.000748 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 09:33:22 (425807): Guest Log: 00:00:00.000806 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 09:33:22 (425807): Guest Log: 00:00:00.000808 main     Process ID: 1306
2025-11-25 09:33:22 (425807): Guest Log: 00:00:00.000809 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 09:33:22 (425807): Guest Log: 00:00:00.003027 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 09:33:22 (425807): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 09:33:22 (425807): Guest Log: [INFO] Mounting shared directory
2025-11-25 09:33:23 (425807): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 09:33:29 (425807): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 09:33:29 (425807): Guest Log: [INFO] Detected branch: prod
2025-11-25 09:33:30 (425807): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 09:33:30 (425807): Guest Log: Copying input files
2025-11-25 09:33:34 (425807): Guest Log: Copied input files into RunAtlas.
2025-11-25 09:33:34 (425807): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-25 09:33:34 (425807): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-25 09:33:34 (425807): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-25 09:33:34 (425807): Guest Log: Further information can be found at the LHC@home message board.
2025-11-25 09:33:46 (425807): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 09:33:46 (425807): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 09:33:46 (425807): Guest Log: 2.6.3.0 1584 0 32224 153291 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-25 09:33:49 (425807): Guest Log: copied the webapp to /var/www
2025-11-25 09:33:49 (425807): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-25 09:33:49 (425807): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-25 09:33:50 (425807): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 09:33:50 (425807): Guest Log:  *** Starting ATLAS job. (PandaID=6895331235 taskID=47556137) ***
2025-11-25 11:11:54 (425807): Status Report: Elapsed Time: '6000.000000'
2025-11-25 11:11:54 (425807): Status Report: CPU Time: '21143.140000'
2025-11-25 12:50:54 (425807): Status Report: Elapsed Time: '12000.000000'
2025-11-25 12:50:54 (425807): Status Report: CPU Time: '44777.450000'
2025-11-25 14:29:55 (425807): Status Report: Elapsed Time: '18000.000000'
2025-11-25 14:29:55 (425807): Status Report: CPU Time: '68416.030000'
2025-11-25 16:08:55 (425807): Status Report: Elapsed Time: '24000.000000'
2025-11-25 16:08:55 (425807): Status Report: CPU Time: '92042.870000'
2025-11-25 17:47:55 (425807): Status Report: Elapsed Time: '30000.000000'
2025-11-25 17:47:55 (425807): Status Report: CPU Time: '115689.920000'
2025-11-25 19:26:56 (425807): Status Report: Elapsed Time: '36000.000000'
2025-11-25 19:26:56 (425807): Status Report: CPU Time: '139337.470000'
2025-11-25 21:05:56 (425807): Status Report: Elapsed Time: '42000.000000'
2025-11-25 21:05:56 (425807): Status Report: CPU Time: '162982.380000'
2025-11-25 22:44:57 (425807): Status Report: Elapsed Time: '48000.000000'
2025-11-25 22:44:57 (425807): Status Report: CPU Time: '186613.990000'
2025-11-26 00:23:57 (425807): Status Report: Elapsed Time: '54000.000000'
2025-11-26 00:23:57 (425807): Status Report: CPU Time: '210259.200000'
2025-11-26 02:02:58 (425807): Status Report: Elapsed Time: '60000.000000'
2025-11-26 02:02:58 (425807): Status Report: CPU Time: '233907.470000'
2025-11-26 03:41:58 (425807): Status Report: Elapsed Time: '66000.000000'
2025-11-26 03:41:58 (425807): Status Report: CPU Time: '257545.350000'
2025-11-26 05:02:02 (425807): Guest Log:  *** Job finished ***
2025-11-26 05:02:02 (425807): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:36,744 | INFO     | [job] queue monitor thread has finished
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:36,752 | INFO     | [data] queue_monitor thread has finished
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:50,714 | INFO     | [monitor] cgroup control has ended
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:52,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139802083174208)>', '<ExcThread(monitor, started 139801479063296)>']
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:52,870 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:52,870 | INFO     | [monitor] control thread has ended
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:57,639 | INFO     | all workflow threads have been joined
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:57,640 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:57,640 | INFO     | traces error code: 0
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:57,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:58,292 [wrapper] ==== pilot stdout END ====
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:58,302 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:58,311 [wrapper] pilotpid: 5983
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:58,320 [wrapper] Pilot exit status: 0
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:58,367 [wrapper] pandaids: 6895331235
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:58,425 [wrapper] cleanup supervisor_pilot  2554 5984
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:58,440 [wrapper] Test setup, not cleaning
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:58,448 [wrapper] apfmon messages muted
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:58,458 [wrapper] ==== wrapper stdout END ====
2025-11-26 05:02:02 (425807): Guest Log: 2025-11-26 13:01:58,467 [wrapper] ==== wrapper stderr END ====
2025-11-26 05:02:02 (425807): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 05:02:02 (425807): Guest Log:     "exeErrorCode": 0,
2025-11-26 05:02:02 (425807): Guest Log:     "exeErrorDiag": "",
2025-11-26 05:02:02 (425807): Guest Log:     "pilotErrorCode": 0,
2025-11-26 05:02:02 (425807): Guest Log:     "pilotErrorDiag": "",
2025-11-26 05:02:02 (425807): Guest Log:  *** Listing of results directory ***
2025-11-26 05:02:02 (425807): Guest Log: total 922632
2025-11-26 05:02:02 (425807): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 21 23:06 pilot3.tar.gz
2025-11-26 05:02:02 (425807): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 21 23:14 queuedata.json
2025-11-26 05:02:02 (425807): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 21 23:19 runpilot2-wrapper.sh
2025-11-26 05:02:02 (425807): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 25 17:33 start_atlas.sh
2025-11-26 05:02:02 (425807): Guest Log: -rw-r--r--. 1 atlas atlas      5942 Nov 25 17:33 init_data.xml
2025-11-26 05:02:02 (425807): Guest Log: -rw-r--r--. 1 atlas atlas    590102 Nov 25 17:33 input.tar.gz
2025-11-26 05:02:02 (425807): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 25 17:33 EVNT.47483658._000165.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 05:02:02 (425807): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 25 17:33 pandaJob.out
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas    991543 Nov 25 17:35 agis_schedconf.cvmfs.json
2025-11-26 05:02:02 (425807): Guest Log: drwx------. 5 atlas atlas      4096 Nov 25 17:35 pilot3
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas 919182628 Nov 26 13:00 HITS.47556137._001647.pool.root.1
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 13:01 pilot_heartbeat.json
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 26 13:01 memory_monitor_summary.json
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 13:01 agis_ddmendpoints.agis.ALL.json
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas   1809015 Nov 26 13:01 log.47556137._001647.job.log.tgz.1
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas      8649 Nov 26 13:01 heartbeat.json
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas      4612 Nov 26 13:01 pilotlog.txt
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas   9065130 Nov 26 13:01 log.47556137._001647.job.log.1
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 13:01 output.list
2025-11-26 05:02:02 (425807): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 13:01 runtime_log
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas  10895360 Nov 26 13:01 result.tar.gz
2025-11-26 05:02:02 (425807): Guest Log: -rw-r--r--. 1 atlas atlas      8732 Nov 26 13:01 runtime_log.err
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas       658 Nov 26 13:01 BWDNDmXapg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmlJKDmXxYo6n.diag
2025-11-26 05:02:02 (425807): Guest Log: Looking for outputfile HITS.47556137._001647.pool.root.1
2025-11-26 05:02:02 (425807): Guest Log: HITS file was successfully produced
2025-11-26 05:02:02 (425807): Guest Log: -rw-------. 1 atlas atlas 919182628 Nov 26 13:00 /home/atlas/RunAtlas/HITS.47556137._001647.pool.root.1
2025-11-26 05:02:03 (425807): Guest Log: Successfully finished the ATLAS job!
2025-11-26 05:02:03 (425807): Guest Log: Copying the results back to the shared directory!
2025-11-26 05:02:03 (425807): Guest Log:  *** Contents of shared directory: ***
2025-11-26 05:02:03 (425807): Guest Log: total 409036
2025-11-26 05:02:03 (425807): Guest Log: -rw-r--r--. 1 root root 407333890 Nov 25 17:32 ATLAS.root_0
2025-11-26 05:02:03 (425807): Guest Log: -rw-r--r--. 1 root root      5942 Nov 25 17:32 init_data.xml
2025-11-26 05:02:03 (425807): Guest Log: -rw-r--r--. 1 root root    590102 Nov 25 17:32 input.tar.gz
2025-11-26 05:02:03 (425807): Guest Log: -rw-r--r--. 1 root root  10895360 Nov 26 13:02 result.tar.gz
2025-11-26 05:02:03 (425807): Guest Log: -rw-r--r--. 1 root root     15847 Nov 25 17:32 start_atlas.sh
2025-11-26 05:02:03 (425807): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 05:02:03 (425807): VM Completion File Detected.
2025-11-26 05:02:03 (425807): Powering off VM.
2025-11-26 05:02:03 (425807): Successfully stopped VM.
2025-11-26 05:02:03 (425807): Deregistering VM. (boinc_f7b4bef1ef085783, slot#3)
2025-11-26 05:02:04 (425807): Removing network bandwidth throttle group from VM.
2025-11-26 05:02:04 (425807): Removing VM from VirtualBox.
2025-11-26 05:02:09 (425807): called boinc_finish(0)

</stderr_txt>
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