Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
19:49:28 (2114012): wrapper (7.7.26015): starting
19:49:28 (2114012): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 19:49:28] Arguments: --nthreads 12
[2025-11-22 19:49:28] Threads: 12
[2025-11-22 19:49:28] Checking for CVMFS
[2025-11-22 19:49:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 19:49:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 19:49:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 19:49:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 19:49:29] 2.11.0.0 7129 2199 137608 153183 1 90 4576164 6144000 22365 130560 0 17352869 99.998 201338 296 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-22 19:49:29] CVMFS is ok
[2025-11-22 19:49:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 19:49:29] Checking for apptainer binary...
[2025-11-22 19:49:29] apptainer is not installed, using version from CVMFS
[2025-11-22 19:49:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 19:49:29] radiat0r
[2025-11-22 19:49:29] apptainer works
[2025-11-22 19:49:29] Set ATHENA_PROC_NUMBER=12
[2025-11-22 19:49:29] Set ATHENA_CORE_NUMBER=12
[2025-11-22 19:49:29] Starting ATLAS job with PandaID=6894267990
[2025-11-22 19:49:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 01:23:22]  *** The last 200 lines of the pilot log: ***
[2025-11-23 01:23:22] 2025-11-23 01:22:23,321 | INFO     | time since job start (19959s) is within the limit (172800.0s)
[2025-11-23 01:23:22] 2025-11-23 01:22:24,039 | INFO     | monitor loop #1334: job 0:6894267990 is in state 'finished'
[2025-11-23 01:23:22] 2025-11-23 01:22:24,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:23:22] 2025-11-23 01:22:24,629 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 01:23:22] 2025-11-23 01:22:24,690 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2371.3156171874994
[2025-11-23 01:23:22] 2025-11-23 01:22:24,782 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6894267990/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 01:23:22] 2025-11-23 01:22:24,782 | INFO     | extracted standard info from prmon json
[2025-11-23 01:23:22] 2025-11-23 01:22:24,782 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 01:23:22] 2025-11-23 01:22:24,783 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 01:23:22] 2025-11-23 01:22:24,788 | INFO     | fitting pss+swap vs Time
[2025-11-23 01:23:22] 2025-11-23 01:22:24,789 | INFO     | sum of square deviations: 10842166483.694263
[2025-11-23 01:23:22] 2025-11-23 01:22:24,792 | INFO     | sum of deviations: 262999772098.0642
[2025-11-23 01:23:22] 2025-11-23 01:22:24,792 | INFO     | mean x: 1763850962.969419
[2025-11-23 01:23:22] 2025-11-23 01:22:24,792 | INFO     | mean y: 3394190.7064220184
[2025-11-23 01:23:22] 2025-11-23 01:22:24,792 | INFO     | intersect: -42782556566.78884
[2025-11-23 01:23:22] 2025-11-23 01:22:24,792 | INFO     | chi2: 6.231037988485975
[2025-11-23 01:23:22] 2025-11-23 01:22:24,793 | INFO     | sum of square deviations: 10352477236.422398
[2025-11-23 01:23:22] 2025-11-23 01:22:24,796 | INFO     | sum of deviations: 391212837152.11176
[2025-11-23 01:23:22] 2025-11-23 01:22:24,796 | INFO     | mean x: 1763850810.484472
[2025-11-23 01:23:22] 2025-11-23 01:22:24,796 | INFO     | mean y: 3434053.9223602484
[2025-11-23 01:23:22] 2025-11-23 01:22:24,796 | INFO     | intersect: -66651248117.69921
[2025-11-23 01:23:22] 2025-11-23 01:22:24,796 | INFO     | chi2: 3.0091402415479718
[2025-11-23 01:23:22] 2025-11-23 01:22:24,797 | INFO     | current chi2=3.0091402415479718 (change=51.70723967485975 %)
[2025-11-23 01:23:22] 2025-11-23 01:22:24,797 | INFO     | sum of square deviations: 9877686693.949484
[2025-11-23 01:23:22] 2025-11-23 01:22:24,800 | INFO     | sum of deviations: 393319995214.37555
[2025-11-23 01:23:22] 2025-11-23 01:22:24,800 | INFO     | mean x: 1763850657.9873817
[2025-11-23 01:23:22] 2025-11-23 01:22:24,800 | INFO     | mean y: 3434683.3438485805
[2025-11-23 01:23:22] 2025-11-23 01:22:24,800 | INFO     | intersect: -70231404085.47711
[2025-11-23 01:23:22] 2025-11-23 01:22:24,800 | INFO     | chi2: 2.904921746211856
[2025-11-23 01:23:22] 2025-11-23 01:22:24,801 | INFO     | current chi2=2.904921746211856 (change=3.4633977472084574 %)
[2025-11-23 01:23:22] 2025-11-23 01:22:24,801 | INFO     | right removable region: 316
[2025-11-23 01:23:22] 2025-11-23 01:22:24,801 | INFO     | sum of square deviations: 10352303570.388186
[2025-11-23 01:23:22] 2025-11-23 01:22:24,804 | INFO     | sum of deviations: 144226907337.9439
[2025-11-23 01:23:22] 2025-11-23 01:22:24,804 | INFO     | mean x: 1763851115.4813664
[2025-11-23 01:23:22] 2025-11-23 01:22:24,804 | INFO     | mean y: 3431056.4906832296
[2025-11-23 01:23:22] 2025-11-23 01:22:24,804 | INFO     | intersect: -24570306533.482334
[2025-11-23 01:23:22] 2025-11-23 01:22:24,804 | INFO     | chi2: 3.5431212062399715
[2025-11-23 01:23:22] 2025-11-23 01:22:24,805 | INFO     | current chi2=3.5431212062399715 (change=43.13754445427666 %)
[2025-11-23 01:23:22] 2025-11-23 01:22:24,805 | INFO     | sum of square deviations: 9877496497.886456
[2025-11-23 01:23:22] 2025-11-23 01:22:24,808 | INFO     | sum of deviations: 115018138763.28082
[2025-11-23 01:23:22] 2025-11-23 01:22:24,808 | INFO     | mean x: 1763851267.9810727
[2025-11-23 01:23:22] 2025-11-23 01:22:24,808 | INFO     | mean y: 3440422.880126183
[2025-11-23 01:23:22] 2025-11-23 01:22:24,808 | INFO     | intersect: -20535659736.947433
[2025-11-23 01:23:22] 2025-11-23 01:22:24,809 | INFO     | chi2: 3.4622670275479055
[2025-11-23 01:23:22] 2025-11-23 01:22:24,809 | INFO     | current chi2=3.4622670275479055 (change=2.282004311612868 %)
[2025-11-23 01:23:22] 2025-11-23 01:22:24,809 | INFO     | left removable region: 20
[2025-11-23 01:23:22] 2025-11-23 01:22:24,809 | INFO     | sum of square deviations: 8041713570.0
[2025-11-23 01:23:22] 2025-11-23 01:22:24,812 | INFO     | sum of deviations: 205418021702.5
[2025-11-23 01:23:22] 2025-11-23 01:22:24,812 | INFO     | mean x: 1763851237.5
[2025-11-23 01:23:22] 2025-11-23 01:22:24,812 | INFO     | mean y: 3497113.496621622
[2025-11-23 01:23:22] 2025-11-23 01:22:24,812 | INFO     | intersect: -45052426432.00669
[2025-11-23 01:23:22] 2025-11-23 01:22:24,812 | INFO     | chi2: 0.0395037519535722
[2025-11-23 01:23:22] 2025-11-23 01:22:24,812 | INFO     | current memory leak: 25.54 B/s (using 296 data points, chi2=0.04)
[2025-11-23 01:23:22] 2025-11-23 01:22:24,813 | INFO     | could have reported an average CPU frequency of 2393 MHz (15 samples)
[2025-11-23 01:23:22] 2025-11-23 01:22:24,813 | INFO     | ..............................
[2025-11-23 01:23:22] 2025-11-23 01:22:24,813 | INFO     | . Timing measurements:
[2025-11-23 01:23:22] 2025-11-23 01:22:24,813 | INFO     | . get job = 0 s
[2025-11-23 01:23:22] 2025-11-23 01:22:24,813 | INFO     | . initial setup = 1 s
[2025-11-23 01:23:22] 2025-11-23 01:22:24,814 | INFO     | . payload setup = 9 s
[2025-11-23 01:23:22] 2025-11-23 01:22:24,814 | INFO     | . stage-in = 0 s
[2025-11-23 01:23:22] 2025-11-23 01:22:24,814 | INFO     | . payload execution = 19911 s
[2025-11-23 01:23:22] 2025-11-23 01:22:24,814 | INFO     | . stage-out = 2 s
[2025-11-23 01:23:22] 2025-11-23 01:22:24,814 | INFO     | . log creation = 0 s
[2025-11-23 01:23:22] 2025-11-23 01:22:24,814 | INFO     | ..............................
[2025-11-23 01:23:22] 2025-11-23 01:22:25,259 | INFO     | 
[2025-11-23 01:23:22] 2025-11-23 01:22:25,259 | INFO     | job summary report
[2025-11-23 01:23:22] 2025-11-23 01:22:25,259 | INFO     | --------------------------------------------------
[2025-11-23 01:23:22] 2025-11-23 01:22:25,259 | INFO     | PanDA job id: 6894267990
[2025-11-23 01:23:22] 2025-11-23 01:22:25,259 | INFO     | task id: 47533967
[2025-11-23 01:23:22] 2025-11-23 01:22:25,259 | INFO     | errors: (none)
[2025-11-23 01:23:22] 2025-11-23 01:22:25,259 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 01:23:22] 2025-11-23 01:22:25,260 | INFO     | pilot state: finished 
[2025-11-23 01:23:22] 2025-11-23 01:22:25,260 | INFO     | transexitcode: 0
[2025-11-23 01:23:22] 2025-11-23 01:22:25,260 | INFO     | exeerrorcode: 0
[2025-11-23 01:23:22] 2025-11-23 01:22:25,260 | INFO     | exeerrordiag: 
[2025-11-23 01:23:22] 2025-11-23 01:22:25,260 | INFO     | exitcode: 0
[2025-11-23 01:23:22] 2025-11-23 01:22:25,260 | INFO     | exitmsg: OK
[2025-11-23 01:23:22] 2025-11-23 01:22:25,260 | INFO     | cpuconsumptiontime: 233851 s
[2025-11-23 01:23:22] 2025-11-23 01:22:25,260 | INFO     | nevents: 1000
[2025-11-23 01:23:22] 2025-11-23 01:22:25,260 | INFO     | neventsw: 0
[2025-11-23 01:23:22] 2025-11-23 01:22:25,260 | INFO     | pid: 2126988
[2025-11-23 01:23:22] 2025-11-23 01:22:25,261 | INFO     | pgrp: 2126988
[2025-11-23 01:23:22] 2025-11-23 01:22:25,261 | INFO     | corecount: 12
[2025-11-23 01:23:22] 2025-11-23 01:22:25,261 | INFO     | event service: False
[2025-11-23 01:23:22] 2025-11-23 01:22:25,261 | INFO     | sizes: {0: 2298581, 1: 2298836, 8: 2299098, 12: 2299126, 19924: 2333805, 19928: 2342801, 19931: 2342985, 19942: 2343231}
[2025-11-23 01:23:22] 2025-11-23 01:22:25,261 | INFO     | --------------------------------------------------
[2025-11-23 01:23:22] 2025-11-23 01:22:25,261 | INFO     | 
[2025-11-23 01:23:22] 2025-11-23 01:22:25,261 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-11-23 01:23:22] 2025-11-23 01:22:25,289 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,289 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,289 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,289 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,291 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 01:23:22] 2025-11-23 01:22:25,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,291 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 01:23:22] 2025-11-23 01:22:25,291 | INFO     | job 6894267990 has completed (purged errors)
[2025-11-23 01:23:22] 2025-11-23 01:22:25,291 | INFO     | overall cleanup function is called
[2025-11-23 01:23:22] 2025-11-23 01:22:26,317 | INFO     | --- collectZombieJob: --- 10, [2126988]
[2025-11-23 01:23:22] 2025-11-23 01:22:26,318 | INFO     | zombie collector waiting for pid 2126988
[2025-11-23 01:23:22] 2025-11-23 01:22:26,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 01:23:22] 2025-11-23 01:22:26,318 | INFO     | collected zombie processes
[2025-11-23 01:23:22] 2025-11-23 01:22:26,318 | INFO     | will attempt to kill all subprocesses of pid=2126988
[2025-11-23 01:23:22] 2025-11-23 01:22:27,204 | INFO     | process IDs to be killed: [2126988] (in reverse order)
[2025-11-23 01:23:22] 2025-11-23 01:22:27,527 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 01:23:22] 2025-11-23 01:22:27,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 01:23:22] 2025-11-23 01:22:27,561 | INFO     | did not find any defunct processes belonging to 2126988
[2025-11-23 01:23:22] 2025-11-23 01:22:27,591 | INFO     | did not find any defunct processes belonging to 2126988
[2025-11-23 01:23:22] 2025-11-23 01:22:27,592 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 01:23:22] 2025-11-23 01:22:27,592 | INFO     | ready for new job
[2025-11-23 01:23:22] 2025-11-23 01:22:27,593 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 01:23:22] 2025-11-23 01:22:27,596 | INFO     | ***************************************
[2025-11-23 01:23:22] 2025-11-23 01:22:27,596 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 01:23:22] 2025-11-23 01:22:27,596 | INFO     | ***************************************
[2025-11-23 01:23:22] 2025-11-23 01:22:27,597 | INFO     | 
[2025-11-23 01:23:22] 2025-11-23 01:22:27,615 | INFO     | architecture information:
[2025-11-23 01:23:22] 2025-11-23 01:22:27,616 | INFO     | executing command: cat /etc/os-release
[2025-11-23 01:23:22] 2025-11-23 01:22:27,633 | INFO     | cat /etc/os-release:
[2025-11-23 01:23:22] NAME="CentOS Linux"
[2025-11-23 01:23:22] VERSION="7 (Core)"
[2025-11-23 01:23:22] ID="centos"
[2025-11-23 01:23:22] ID_LIKE="rhel fedora"
[2025-11-23 01:23:22] VERSION_ID="7"
[2025-11-23 01:23:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 01:23:22] ANSI_COLOR="0;31"
[2025-11-23 01:23:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 01:23:22] HOME_URL="https://www.centos.org/"
[2025-11-23 01:23:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 01:23:22] 
[2025-11-23 01:23:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 01:23:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 01:23:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 01:23:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 01:23:22] 
[2025-11-23 01:23:22] 2025-11-23 01:22:27,633 | INFO     | ***************************************
[2025-11-23 01:23:22] 2025-11-23 01:22:28,137 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-11-23 01:23:22] 2025-11-23 01:22:28,160 | INFO     | sufficient remaining disk space (1380819402752 B)
[2025-11-23 01:23:22] 2025-11-23 01:22:28,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 01:23:22] 2025-11-23 01:22:28,160 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 01:23:22] 2025-11-23 01:22:28,161 | INFO     | update_server=False
[2025-11-23 01:23:22] 2025-11-23 01:22:28,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 01:23:22] 2025-11-23 01:22:28,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:23:22] 2025-11-23 01:22:28,161 | INFO     | aborting loop
[2025-11-23 01:23:22] 2025-11-23 01:22:28,301 | INFO     | all data control threads have been joined
[2025-11-23 01:23:22] 2025-11-23 01:22:28,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 01:23:22] 2025-11-23 01:22:28,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 01:23:22] 2025-11-23 01:22:29,100 | INFO     | all job control threads have been joined
[2025-11-23 01:23:22] 2025-11-23 01:22:29,165 | INFO     | [job] job monitor thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:29,166 | INFO     | [job] retrieve thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:29,282 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:29,307 | INFO     | [data] control thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:29,325 | INFO     | all payload control threads have been joined
[2025-11-23 01:23:22] 2025-11-23 01:22:29,463 | INFO     | [payload] failed_post thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:29,489 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:29,532 | INFO     | [job] validate thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:29,534 | INFO     | [data] copytool_in thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:29,899 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:29,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:23:22] 2025-11-23 01:22:30,105 | INFO     | [job] control thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:30,330 | INFO     | [payload] control thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:30,399 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:30,465 | INFO     | [data] copytool_out thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:30,473 | INFO     | [payload] validate_post thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:30,921 | INFO     | [job] queue monitor thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:32,850 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 01:23:22] 2025-11-23 01:22:57,415 | INFO     | PID=2118745 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 01:23:22] 2025-11-23 01:22:57,415 | INFO     | .. there are 14 such processes running
[2025-11-23 01:23:22] 2025-11-23 01:22:57,415 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 01:23:22] 2025-11-23 01:22:57,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 01:23:22] 2025-11-23 01:22:57,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 01:23:22] 2025-11-23 01:23:16,457 | INFO     | [monitor] cgroup control has ended
[2025-11-23 01:23:22] 2025-11-23 01:23:16,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355725248320)>', '<ExcThread(monitor, started 140355152369408)>']
[2025-11-23 01:23:22] 2025-11-23 01:23:17,505 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 01:23:22] 2025-11-23 01:23:17,505 | INFO     | [monitor] control thread has ended
[2025-11-23 01:23:22] 2025-11-23 01:23:21,561 | INFO     | all workflow threads have been joined
[2025-11-23 01:23:22] 2025-11-23 01:23:21,561 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 01:23:22] 2025-11-23 01:23:21,562 | INFO     | traces error code: 0
[2025-11-23 01:23:22] 2025-11-23 01:23:21,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 01:23:22] 2025-11-23 01:23:21,719 [wrapper] ==== pilot stdout END ====
[2025-11-23 01:23:22] 2025-11-23 01:23:21,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 01:23:22] 2025-11-23 01:23:21,726 [wrapper] pilotpid: 2118745
[2025-11-23 01:23:22] 2025-11-23 01:23:21,729 [wrapper] Pilot exit status: 0
[2025-11-23 01:23:22] 2025-11-23 01:23:21,740 [wrapper] pandaids: 6894267990
[2025-11-23 01:23:22] 2025-11-23 01:23:21,911 [wrapper] cleanup supervisor_pilot 2863007 2118746
[2025-11-23 01:23:22] 2025-11-23 01:23:21,915 [wrapper] Test setup, not cleaning
[2025-11-23 01:23:22] 2025-11-23 01:23:21,918 [wrapper] apfmon messages muted
[2025-11-23 01:23:22] 2025-11-23 01:23:21,921 [wrapper] ==== wrapper stdout END ====
[2025-11-23 01:23:22] 2025-11-23 01:23:21,924 [wrapper] ==== wrapper stderr END ====
[2025-11-23 01:23:22]  *** Error codes and diagnostics ***
[2025-11-23 01:23:22]     "exeErrorCode": 0,
[2025-11-23 01:23:22]     "exeErrorDiag": "",
[2025-11-23 01:23:22]     "pilotErrorCode": 0,
[2025-11-23 01:23:22]     "pilotErrorDiag": "",
[2025-11-23 01:23:22]  *** Listing of results directory ***
[2025-11-23 01:23:22] total 1328104
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc    576529 Nov 21 05:09 pilot3.tar.gz
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc      5112 Nov 21 05:39 queuedata.json
[2025-11-23 01:23:22] -rwx------ 1 boinc boinc     36292 Nov 21 05:40 runpilot2-wrapper.sh
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc       100 Nov 22 19:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 01:23:22] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 19:49 run_atlas
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc       105 Nov 22 19:49 job.xml
[2025-11-23 01:23:22] -rw-r--r-- 2 boinc boinc     15847 Nov 22 19:49 start_atlas.sh
[2025-11-23 01:23:22] drwxrwx--x 2 boinc boinc      4096 Nov 22 19:49 shared
[2025-11-23 01:23:22] -rw-r--r-- 2 boinc boinc    590108 Nov 22 19:49 input.tar.gz
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc      9416 Nov 22 19:49 init_data.xml
[2025-11-23 01:23:22] -rw-r--r-- 2 boinc boinc 411037099 Nov 22 19:49 EVNT.47493127._002259.pool.root.1
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc         0 Nov 22 19:49 boinc_setup_complete
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc         0 Nov 22 19:49 boinc_lockfile
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc      2786 Nov 22 19:49 pandaJob.out
[2025-11-23 01:23:22] -rw------- 1 boinc boinc    989768 Nov 22 19:49 agis_schedconf.cvmfs.json
[2025-11-23 01:23:22] drwx------ 5 boinc boinc      4096 Nov 22 19:49 pilot3
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc       532 Nov 23 01:15 boinc_task_state.xml
[2025-11-23 01:23:22] -rw------- 1 boinc boinc 935325210 Nov 23 01:21 HITS.47533967._002308.pool.root.1
[2025-11-23 01:23:22] -rw------- 1 boinc boinc      1044 Nov 23 01:22 memory_monitor_summary.json
[2025-11-23 01:23:22] -rw------- 1 boinc boinc   1526164 Nov 23 01:22 agis_ddmendpoints.agis.ALL.json
[2025-11-23 01:23:22] -rw------- 1 boinc boinc   2099666 Nov 23 01:22 log.47533967._002308.job.log.tgz.1
[2025-11-23 01:23:22] -rw------- 1 boinc boinc        95 Nov 23 01:22 pilot_heartbeat.json
[2025-11-23 01:23:22] -rw------- 1 boinc boinc      8561 Nov 23 01:22 heartbeat.json
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc        29 Nov 23 01:23 wrapper_checkpoint.txt
[2025-11-23 01:23:22] -rw------- 1 boinc boinc      4827 Nov 23 01:23 pilotlog.txt
[2025-11-23 01:23:22] -rw------- 1 boinc boinc   2746165 Nov 23 01:23 log.47533967._002308.job.log.1
[2025-11-23 01:23:22] -rw------- 1 boinc boinc       353 Nov 23 01:23 output.list
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc       620 Nov 23 01:23 runtime_log
[2025-11-23 01:23:22] -rw------- 1 boinc boinc   4864000 Nov 23 01:23 result.tar.gz
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc      8789 Nov 23 01:23 runtime_log.err
[2025-11-23 01:23:22] -rw------- 1 boinc boinc       653 Nov 23 01:23 pMWMDmG4Yg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmB8IKDm7MvIUm.diag
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc      8192 Nov 23 01:23 boinc_mmap_file
[2025-11-23 01:23:22] -rw-r--r-- 1 boinc boinc     21039 Nov 23 01:23 stderr.txt
[2025-11-23 01:23:22] HITS file was successfully produced:
[2025-11-23 01:23:22] -rw------- 1 boinc boinc 935325210 Nov 23 01:21 shared/HITS.pool.root.1
[2025-11-23 01:23:22]  *** Contents of shared directory: ***
[2025-11-23 01:23:22] total 1320164
[2025-11-23 01:23:22] -rw-r--r-- 2 boinc boinc     15847 Nov 22 19:49 start_atlas.sh
[2025-11-23 01:23:22] -rw-r--r-- 2 boinc boinc    590108 Nov 22 19:49 input.tar.gz
[2025-11-23 01:23:22] -rw-r--r-- 2 boinc boinc 411037099 Nov 22 19:49 ATLAS.root_0
[2025-11-23 01:23:22] -rw------- 1 boinc boinc 935325210 Nov 23 01:21 HITS.pool.root.1
[2025-11-23 01:23:22] -rw------- 1 boinc boinc   4864000 Nov 23 01:23 result.tar.gz
01:23:23 (2114012): run_atlas exited; CPU time 234333.699082
01:23:23 (2114012): called boinc_finish(0)

</stderr_txt>
]]>

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