Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:28:20 (25849): wrapper (7.7.26015): starting
04:28:20 (25849): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 04:28:20] Arguments: --nthreads 12
[2025-11-22 04:28:20] Threads: 12
[2025-11-22 04:28:20] Checking for CVMFS
[2025-11-22 04:28:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 04:28:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 04:28:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 04:28:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 04:28:21] 2.11.2.0 30551 111683 93096 153166 2 82 10747119 20275200 1 130560 0 49602040 99.914 6184891 28564 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-22 04:28:21] CVMFS is ok
[2025-11-22 04:28:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 04:28:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 04:28:21] Further information can be found at the LHC@home message board.
[2025-11-22 04:28:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 04:28:21] Checking for apptainer binary...
[2025-11-22 04:28:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 04:28:21] Running /usr/bin/apptainer --version
[2025-11-22 04:28:21] apptainer version 1.3.2-1.el7
[2025-11-22 04:28:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 04:28:22] c-205-16.aglt2.org
[2025-11-22 04:28:22] apptainer works
[2025-11-22 04:28:22] Set ATHENA_PROC_NUMBER=12
[2025-11-22 04:28:22] Set ATHENA_CORE_NUMBER=12
[2025-11-22 04:28:22] Starting ATLAS job with PandaID=6894268698
[2025-11-22 04:28:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 11:40:24]  *** The last 200 lines of the pilot log: ***
[2025-11-22 11:40:24] 2025-11-22 16:39:42,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 11:40:24] 2025-11-22 16:39:44,735 | INFO     | time since job start (25867s) is within the limit (172800.0s)
[2025-11-22 11:40:24] 2025-11-22 16:39:44,869 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-22 11:40:24] 2025-11-22 16:39:44,873 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-22 11:40:24] 2025-11-22 16:39:44,874 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894268698/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 11:40:24] 2025-11-22 16:39:44,875 | INFO     | extracted standard info from prmon json
[2025-11-22 11:40:24] 2025-11-22 16:39:44,875 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 11:40:24] 2025-11-22 16:39:44,875 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 11:40:24] 2025-11-22 16:39:44,882 | INFO     | fitting pss+swap vs Time
[2025-11-22 11:40:24] 2025-11-22 16:39:44,882 | INFO     | sum of square deviations: 23636139340.95987
[2025-11-22 11:40:24] 2025-11-22 16:39:44,886 | INFO     | sum of deviations: 331323311311.95
[2025-11-22 11:40:24] 2025-11-22 16:39:44,886 | INFO     | mean x: 1763816647.7004716
[2025-11-22 11:40:24] 2025-11-22 16:39:44,886 | INFO     | mean y: 3428890.7476415094
[2025-11-22 11:40:24] 2025-11-22 16:39:44,887 | INFO     | intersect: -24721149173.08819
[2025-11-22 11:40:24] 2025-11-22 16:39:44,887 | INFO     | chi2: 5.985524672667441
[2025-11-22 11:40:24] 2025-11-22 16:39:44,888 | INFO     | sum of square deviations: 22809805585.756523
[2025-11-22 11:40:24] 2025-11-22 16:39:44,891 | INFO     | sum of deviations: 503909230070.1476
[2025-11-22 11:40:24] 2025-11-22 16:39:44,892 | INFO     | mean x: 1763816495.202864
[2025-11-22 11:40:24] 2025-11-22 16:39:44,892 | INFO     | mean y: 3460708.2100238665
[2025-11-22 11:40:24] 2025-11-22 16:39:44,892 | INFO     | intersect: -38962387060.24753
[2025-11-22 11:40:24] 2025-11-22 16:39:44,893 | INFO     | chi2: 2.5620368495647354
[2025-11-22 11:40:24] 2025-11-22 16:39:44,893 | INFO     | current chi2=2.5620368495647354 (change=57.196119142835855 %)
[2025-11-22 11:40:24] 2025-11-22 16:39:44,893 | INFO     | sum of square deviations: 22002960568.04832
[2025-11-22 11:40:24] 2025-11-22 16:39:44,897 | INFO     | sum of deviations: 535332786181.9948
[2025-11-22 11:40:24] 2025-11-22 16:39:44,897 | INFO     | mean x: 1763816342.705314
[2025-11-22 11:40:24] 2025-11-22 16:39:44,897 | INFO     | mean y: 3466603.229468599
[2025-11-22 11:40:24] 2025-11-22 16:39:44,897 | INFO     | intersect: -42910245582.61779
[2025-11-22 11:40:24] 2025-11-22 16:39:44,898 | INFO     | chi2: 2.247392825837736
[2025-11-22 11:40:24] 2025-11-22 16:39:44,898 | INFO     | current chi2=2.247392825837736 (change=12.281010859795177 %)
[2025-11-22 11:40:24] 2025-11-22 16:39:44,898 | INFO     | right removable region: 413
[2025-11-22 11:40:24] 2025-11-22 16:39:44,898 | INFO     | sum of square deviations: 22809753735.756527
[2025-11-22 11:40:24] 2025-11-22 16:39:44,902 | INFO     | sum of deviations: 202279260745.2459
[2025-11-22 11:40:24] 2025-11-22 16:39:44,902 | INFO     | mean x: 1763816800.202864
[2025-11-22 11:40:24] 2025-11-22 16:39:44,902 | INFO     | mean y: 3452619.9618138424
[2025-11-22 11:40:24] 2025-11-22 16:39:44,902 | INFO     | intersect: -15638257613.664568
[2025-11-22 11:40:24] 2025-11-22 16:39:44,903 | INFO     | chi2: 3.8822739202520364
[2025-11-22 11:40:24] 2025-11-22 16:39:44,903 | INFO     | current chi2=3.8822739202520364 (change=35.1389538501074 %)
[2025-11-22 11:40:24] 2025-11-22 16:39:44,904 | INFO     | sum of square deviations: 22002856868.04831
[2025-11-22 11:40:24] 2025-11-22 16:39:44,907 | INFO     | sum of deviations: 170086915244.62305
[2025-11-22 11:40:24] 2025-11-22 16:39:44,907 | INFO     | mean x: 1763816952.705314
[2025-11-22 11:40:24] 2025-11-22 16:39:44,907 | INFO     | mean y: 3458696.8985507246
[2025-11-22 11:40:24] 2025-11-22 16:39:44,908 | INFO     | intersect: -13631233667.867476
[2025-11-22 11:40:24] 2025-11-22 16:39:44,908 | INFO     | chi2: 3.8270114075934347
[2025-11-22 11:40:24] 2025-11-22 16:39:44,908 | INFO     | current chi2=3.8270114075934347 (change=1.4234573292297232 %)
[2025-11-22 11:40:24] 2025-11-22 16:39:44,908 | INFO     | left removable region: 20
[2025-11-22 11:40:24] 2025-11-22 16:39:44,909 | INFO     | sum of square deviations: 18821622777.47062
[2025-11-22 11:40:24] 2025-11-22 16:39:44,912 | INFO     | sum of deviations: 332541120712.13745
[2025-11-22 11:40:24] 2025-11-22 16:39:44,912 | INFO     | mean x: 1763816922.211196
[2025-11-22 11:40:24] 2025-11-22 16:39:44,912 | INFO     | mean y: 3505577.8778625955
[2025-11-22 11:40:24] 2025-11-22 16:39:44,913 | INFO     | intersect: -31159676416.462776
[2025-11-22 11:40:24] 2025-11-22 16:39:44,913 | INFO     | chi2: 0.029174151574742176
[2025-11-22 11:40:24] 2025-11-22 16:39:44,913 | INFO     | current memory leak: 17.67 B/s (using 393 data points, chi2=0.03)
[2025-11-22 11:40:24] 2025-11-22 16:39:44,913 | INFO     | could have reported an average CPU frequency of 2365 MHz (18 samples)
[2025-11-22 11:40:24] 2025-11-22 16:39:44,914 | INFO     | ..............................
[2025-11-22 11:40:24] 2025-11-22 16:39:44,914 | INFO     | . Timing measurements:
[2025-11-22 11:40:24] 2025-11-22 16:39:44,914 | INFO     | . get job = 0 s
[2025-11-22 11:40:24] 2025-11-22 16:39:44,914 | INFO     | . initial setup = 2 s
[2025-11-22 11:40:24] 2025-11-22 16:39:44,914 | INFO     | . payload setup = 7 s
[2025-11-22 11:40:24] 2025-11-22 16:39:44,914 | INFO     | . stage-in = 0 s
[2025-11-22 11:40:24] 2025-11-22 16:39:44,914 | INFO     | . payload execution = 25829 s
[2025-11-22 11:40:24] 2025-11-22 16:39:44,914 | INFO     | . stage-out = 3 s
[2025-11-22 11:40:24] 2025-11-22 16:39:44,914 | INFO     | . log creation = 0 s
[2025-11-22 11:40:24] 2025-11-22 16:39:44,915 | INFO     | ..............................
[2025-11-22 11:40:24] 2025-11-22 16:39:45,463 | INFO     | 
[2025-11-22 11:40:24] 2025-11-22 16:39:45,463 | INFO     | job summary report
[2025-11-22 11:40:24] 2025-11-22 16:39:45,464 | INFO     | --------------------------------------------------
[2025-11-22 11:40:24] 2025-11-22 16:39:45,464 | INFO     | PanDA job id: 6894268698
[2025-11-22 11:40:24] 2025-11-22 16:39:45,464 | INFO     | task id: 47533967
[2025-11-22 11:40:24] 2025-11-22 16:39:45,464 | INFO     | errors: (none)
[2025-11-22 11:40:24] 2025-11-22 16:39:45,464 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 11:40:24] 2025-11-22 16:39:45,464 | INFO     | pilot state: finished 
[2025-11-22 11:40:24] 2025-11-22 16:39:45,465 | INFO     | transexitcode: 0
[2025-11-22 11:40:24] 2025-11-22 16:39:45,465 | INFO     | exeerrorcode: 0
[2025-11-22 11:40:24] 2025-11-22 16:39:45,465 | INFO     | exeerrordiag: 
[2025-11-22 11:40:24] 2025-11-22 16:39:45,465 | INFO     | exitcode: 0
[2025-11-22 11:40:24] 2025-11-22 16:39:45,465 | INFO     | exitmsg: OK
[2025-11-22 11:40:24] 2025-11-22 16:39:45,465 | INFO     | cpuconsumptiontime: 296422 s
[2025-11-22 11:40:24] 2025-11-22 16:39:45,465 | INFO     | nevents: 1000
[2025-11-22 11:40:24] 2025-11-22 16:39:45,466 | INFO     | neventsw: 0
[2025-11-22 11:40:24] 2025-11-22 16:39:45,466 | INFO     | pid: 3700
[2025-11-22 11:40:24] 2025-11-22 16:39:45,466 | INFO     | pgrp: 3700
[2025-11-22 11:40:24] 2025-11-22 16:39:45,466 | INFO     | corecount: 12
[2025-11-22 11:40:24] 2025-11-22 16:39:45,466 | INFO     | event service: False
[2025-11-22 11:40:24] 2025-11-22 16:39:45,466 | INFO     | sizes: {0: 2298807, 5: 2299069, 11: 2299125, 25839: 2336390, 25840: 2336389, 25844: 2345439, 25845: 2345623, 25851: 2345869}
[2025-11-22 11:40:24] 2025-11-22 16:39:45,467 | INFO     | --------------------------------------------------
[2025-11-22 11:40:24] 2025-11-22 16:39:45,467 | INFO     | 
[2025-11-22 11:40:24] 2025-11-22 16:39:45,467 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-22 11:40:24] 2025-11-22 16:39:45,491 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,492 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,492 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,492 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,492 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,492 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,493 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,493 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,493 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,493 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,493 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,493 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,494 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 11:40:24] 2025-11-22 16:39:45,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,494 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 11:40:24] 2025-11-22 16:39:45,495 | INFO     | job 6894268698 has completed (purged errors)
[2025-11-22 11:40:24] 2025-11-22 16:39:45,495 | INFO     | overall cleanup function is called
[2025-11-22 11:40:24] 2025-11-22 16:39:46,512 | INFO     | --- collectZombieJob: --- 10, [3700]
[2025-11-22 11:40:24] 2025-11-22 16:39:46,512 | INFO     | zombie collector waiting for pid 3700
[2025-11-22 11:40:24] 2025-11-22 16:39:46,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 11:40:24] 2025-11-22 16:39:46,512 | INFO     | collected zombie processes
[2025-11-22 11:40:24] 2025-11-22 16:39:46,512 | INFO     | will attempt to kill all subprocesses of pid=3700
[2025-11-22 11:40:24] 2025-11-22 16:39:46,605 | INFO     | process IDs to be killed: [3700] (in reverse order)
[2025-11-22 11:40:24] 2025-11-22 16:39:46,659 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 11:40:24] 2025-11-22 16:39:46,660 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 11:40:24] 2025-11-22 16:39:46,663 | INFO     | did not find any defunct processes belonging to 3700
[2025-11-22 11:40:24] 2025-11-22 16:39:46,665 | INFO     | did not find any defunct processes belonging to 3700
[2025-11-22 11:40:24] 2025-11-22 16:39:46,667 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 11:40:24] 2025-11-22 16:39:46,667 | INFO     | ready for new job
[2025-11-22 11:40:24] 2025-11-22 16:39:46,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 11:40:24] 2025-11-22 16:39:46,670 | INFO     | ***************************************
[2025-11-22 11:40:24] 2025-11-22 16:39:46,670 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 11:40:24] 2025-11-22 16:39:46,670 | INFO     | ***************************************
[2025-11-22 11:40:24] 2025-11-22 16:39:46,670 | INFO     | 
[2025-11-22 11:40:24] 2025-11-22 16:39:46,670 | INFO     | architecture information:
[2025-11-22 11:40:24] 2025-11-22 16:39:46,671 | INFO     | executing command: cat /etc/os-release
[2025-11-22 11:40:24] 2025-11-22 16:39:46,687 | INFO     | cat /etc/os-release:
[2025-11-22 11:40:24] NAME="CentOS Linux"
[2025-11-22 11:40:24] VERSION="7 (Core)"
[2025-11-22 11:40:24] ID="centos"
[2025-11-22 11:40:24] ID_LIKE="rhel fedora"
[2025-11-22 11:40:24] VERSION_ID="7"
[2025-11-22 11:40:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 11:40:24] ANSI_COLOR="0;31"
[2025-11-22 11:40:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 11:40:24] HOME_URL="https://www.centos.org/"
[2025-11-22 11:40:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 11:40:24] 
[2025-11-22 11:40:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 11:40:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 11:40:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 11:40:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 11:40:24] 
[2025-11-22 11:40:24] 2025-11-22 16:39:46,687 | INFO     | ***************************************
[2025-11-22 11:40:24] 2025-11-22 16:39:47,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-22 11:40:24] 2025-11-22 16:39:47,207 | INFO     | sufficient remaining disk space (28379709440 B)
[2025-11-22 11:40:24] 2025-11-22 16:39:47,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 11:40:24] 2025-11-22 16:39:47,207 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 11:40:24] 2025-11-22 16:39:47,208 | INFO     | update_server=False
[2025-11-22 11:40:24] 2025-11-22 16:39:47,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 11:40:24] 2025-11-22 16:39:47,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:40:24] 2025-11-22 16:39:47,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 11:40:24] 2025-11-22 16:39:47,209 | INFO     | aborting loop
[2025-11-22 11:40:24] 2025-11-22 16:39:47,369 | INFO     | all data control threads have been joined
[2025-11-22 11:40:24] 2025-11-22 16:39:47,643 | INFO     | all payload control threads have been joined
[2025-11-22 11:40:24] 2025-11-22 16:39:47,706 | INFO     | all job control threads have been joined
[2025-11-22 11:40:24] 2025-11-22 16:39:48,213 | INFO     | [job] retrieve thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:48,214 | INFO     | [job] job monitor thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:48,374 | INFO     | [data] control thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:48,451 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:48,646 | INFO     | [payload] control thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:48,684 | INFO     | [job] validate thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:48,693 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:48,707 | INFO     | [job] control thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:48,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 11:40:24] 2025-11-22 16:39:49,009 | INFO     | [data] copytool_in thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:49,187 | INFO     | [payload] failed_post thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:49,214 | INFO     | [data] copytool_out thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:49,274 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:49,282 | INFO     | [payload] validate_post thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:50,006 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:40:24] 2025-11-22 16:39:51,007 | INFO     | [job] queue monitor thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:52,967 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:39:57,559 | INFO     | job.realtimelogging is not enabled
[2025-11-22 11:40:24] 2025-11-22 16:39:58,561 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 11:40:24] 2025-11-22 16:40:16,814 | INFO     | 25871s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-22 11:40:24] 2025-11-22 16:40:17,930 | INFO     | PID=29595 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 11:40:24] 2025-11-22 16:40:17,931 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 11:40:24] 2025-11-22 16:40:17,931 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 11:40:24] 2025-11-22 16:40:17,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 11:40:24] 2025-11-22 16:40:19,076 | INFO     | [monitor] cgroup control has ended
[2025-11-22 11:40:24] 2025-11-22 16:40:19,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243834390336)>', '<ExcThread(monitor, started 140243399325440)>']
[2025-11-22 11:40:24] 2025-11-22 16:40:19,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 11:40:24] 2025-11-22 16:40:19,939 | INFO     | [monitor] control thread has ended
[2025-11-22 11:40:24] 2025-11-22 16:40:24,512 | INFO     | all workflow threads have been joined
[2025-11-22 11:40:24] 2025-11-22 16:40:24,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 11:40:24] 2025-11-22 16:40:24,513 | INFO     | traces error code: 0
[2025-11-22 11:40:24] 2025-11-22 16:40:24,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 11:40:24] 2025-11-22 16:40:24,598 [wrapper] ==== pilot stdout END ====
[2025-11-22 11:40:24] 2025-11-22 16:40:24,602 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 11:40:24] 2025-11-22 16:40:24,606 [wrapper] pilotpid: 29595
[2025-11-22 11:40:24] 2025-11-22 16:40:24,610 [wrapper] Pilot exit status: 0
[2025-11-22 11:40:24] 2025-11-22 16:40:24,625 [wrapper] pandaids: 6894268698
[2025-11-22 11:40:24] 2025-11-22 16:40:24,664 [wrapper] cleanup supervisor_pilot 18971 29596
[2025-11-22 11:40:24] 2025-11-22 16:40:24,668 [wrapper] Test setup, not cleaning
[2025-11-22 11:40:24] 2025-11-22 16:40:24,673 [wrapper] apfmon messages muted
[2025-11-22 11:40:24] 2025-11-22 16:40:24,677 [wrapper] ==== wrapper stdout END ====
[2025-11-22 11:40:24] 2025-11-22 16:40:24,680 [wrapper] ==== wrapper stderr END ====
[2025-11-22 11:40:24]  *** Error codes and diagnostics ***
[2025-11-22 11:40:24]     "exeErrorCode": 0,
[2025-11-22 11:40:24]     "exeErrorDiag": "",
[2025-11-22 11:40:24]     "pilotErrorCode": 0,
[2025-11-22 11:40:24]     "pilotErrorDiag": "",
[2025-11-22 11:40:24]  *** Listing of results directory ***
[2025-11-22 11:40:24] total 1317732
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 01:04 pilot3.tar.gz
[2025-11-22 11:40:24] -rwx------ 1 boincer umatlas     36292 Nov 21 01:13 runpilot2-wrapper.sh
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 01:13 queuedata.json
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas       100 Nov 22 04:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 11:40:24] -rwxr-xr-x 1 boincer umatlas      7986 Nov 22 04:28 run_atlas
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas       105 Nov 22 04:28 job.xml
[2025-11-22 11:40:24] -rw-r--r-- 2 boincer umatlas 410791956 Nov 22 04:28 EVNT.47493127._002278.pool.root.1
[2025-11-22 11:40:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 04:28 start_atlas.sh
[2025-11-22 11:40:24] drwxrwx--x 2 boincer umatlas      4096 Nov 22 04:28 shared
[2025-11-22 11:40:24] -rw-r--r-- 2 boincer umatlas    590101 Nov 22 04:28 input.tar.gz
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas         0 Nov 22 04:28 boinc_lockfile
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas      2786 Nov 22 04:28 pandaJob.out
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas        57 Nov 22 04:28 setup.sh.local
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas    989768 Nov 22 04:28 agis_schedconf.cvmfs.json
[2025-11-22 11:40:24] drwx------ 5 boincer umatlas      4096 Nov 22 04:28 pilot3
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas       532 Nov 22 11:30 boinc_task_state.xml
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas      5956 Nov 22 11:37 init_data.xml
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas 923050890 Nov 22 11:39 HITS.47533967._002493.pool.root.1
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas      1062 Nov 22 11:39 memory_monitor_summary.json
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas   1526164 Nov 22 11:39 agis_ddmendpoints.agis.ALL.json
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas   2173103 Nov 22 11:39 log.47533967._002493.job.log.tgz.1
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas        95 Nov 22 11:39 pilot_heartbeat.json
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas      8669 Nov 22 11:39 heartbeat.json
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas      8192 Nov 22 11:40 boinc_mmap_file
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas        29 Nov 22 11:40 wrapper_checkpoint.txt
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas      4934 Nov 22 11:40 pilotlog.txt
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas   3618905 Nov 22 11:40 log.47533967._002493.job.log.1
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas       353 Nov 22 11:40 output.list
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas       620 Nov 22 11:40 runtime_log
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas   5816320 Nov 22 11:40 result.tar.gz
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas       670 Nov 22 11:40 WGbKDmWZZg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHPHKDmJIIMAn.diag
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas      9345 Nov 22 11:40 runtime_log.err
[2025-11-22 11:40:24] -rw-r--r-- 1 boincer umatlas     21311 Nov 22 11:40 stderr.txt
[2025-11-22 11:40:24] HITS file was successfully produced:
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas 923050890 Nov 22 11:39 shared/HITS.pool.root.1
[2025-11-22 11:40:24]  *** Contents of shared directory: ***
[2025-11-22 11:40:24] total 1308868
[2025-11-22 11:40:24] -rw-r--r-- 2 boincer umatlas 410791956 Nov 22 04:28 ATLAS.root_0
[2025-11-22 11:40:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 22 04:28 start_atlas.sh
[2025-11-22 11:40:24] -rw-r--r-- 2 boincer umatlas    590101 Nov 22 04:28 input.tar.gz
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas 923050890 Nov 22 11:39 HITS.pool.root.1
[2025-11-22 11:40:24] -rw------- 1 boincer umatlas   5816320 Nov 22 11:40 result.tar.gz
11:40:26 (25849): run_atlas exited; CPU time 289456.475971
11:40:26 (25849): called boinc_finish(0)

</stderr_txt>
]]>

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