Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:26:46 (3714211): wrapper (7.7.26015): starting
03:26:46 (3714211): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 03:26:47] Arguments: --nthreads 4
[2025-11-27 03:26:47] Threads: 4
[2025-11-27 03:26:47] Checking for CVMFS
[2025-11-27 03:26:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 03:26:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 03:26:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 03:26:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 03:26:47] 2.9.2.0 3608684 526 66668 153343 2 56 34524677 36864001 0 130560 0 238265 99.985 17234 12653 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 03:26:47] CVMFS is ok
[2025-11-27 03:26:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 03:26:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 03:26:47] Further information can be found at the LHC@home message board.
[2025-11-27 03:26:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:26:47] Checking for apptainer binary...
[2025-11-27 03:26:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 03:26:47] Running /usr/bin/apptainer --version
[2025-11-27 03:26:47] apptainer version 1.4.1-1.1
[2025-11-27 03:26:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:26:47] thA350
[2025-11-27 03:26:47] apptainer works
[2025-11-27 03:26:47] Set ATHENA_PROC_NUMBER=4
[2025-11-27 03:26:47] Set ATHENA_CORE_NUMBER=4
[2025-11-27 03:26:47] Starting ATLAS job with PandaID=6893935650
[2025-11-27 03:26:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:15:16]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:15:16] 2025-11-27 05:14:40,727 | INFO     | total number of processed events: 400 (read)
[2025-11-27 06:15:16] 2025-11-27 05:14:40,727 | INFO     | executing command: lscpu
[2025-11-27 06:15:16] 2025-11-27 05:14:40,744 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 06:15:16] 2025-11-27 05:14:40,888 | INFO     | time since job start (10067s) is within the limit (172800.0s)
[2025-11-27 06:15:16] 2025-11-27 05:14:41,698 | INFO     | monitor loop #767: job 0:6893935650 is in state 'finished'
[2025-11-27 06:15:16] 2025-11-27 05:14:41,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:15:16] 2025-11-27 05:14:42,893 | INFO     | time since job start (10069s) is within the limit (172800.0s)
[2025-11-27 06:15:16] 2025-11-27 05:14:44,201 | INFO     | monitor loop #768: job 0:6893935650 is in state 'finished'
[2025-11-27 06:15:16] 2025-11-27 05:14:44,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:15:16] 2025-11-27 05:14:44,203 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 06:15:16] 2025-11-27 05:14:44,204 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3654.5568749999998
[2025-11-27 06:15:16] 2025-11-27 05:14:44,206 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6893935650/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:15:16] 2025-11-27 05:14:44,206 | INFO     | extracted standard info from prmon json
[2025-11-27 06:15:16] 2025-11-27 05:14:44,206 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:15:16] 2025-11-27 05:14:44,206 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:15:16] 2025-11-27 05:14:44,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 06:15:16] 2025-11-27 05:14:44,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 06:15:16] 2025-11-27 05:14:44,207 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:15:16] 2025-11-27 05:14:44,207 | INFO     | sum of square deviations: 1392881930.0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | sum of deviations: -31036479444.999996
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | mean x: 1764215436.0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | mean y: 2482951.193939394
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | intersect: 39313091364.3318
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | chi2: 1.8560577786623529
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | sum of square deviations: 1270051720.0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | sum of deviations: -29498052369.0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | mean x: 1764215283.5
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | mean y: 2484861.75
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | intersect: 40977914447.30513
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | chi2: 1.849985868058108
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | current chi2=1.849985868058108 (change=0.3271401717149568 %)
[2025-11-27 06:15:16] 2025-11-27 05:14:44,208 | INFO     | right removable region: 159
[2025-11-27 06:15:16] 2025-11-27 05:14:44,209 | INFO     | sum of square deviations: 1270051720.0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,209 | INFO     | sum of deviations: -54408236147.49999
[2025-11-27 06:15:16] 2025-11-27 05:14:44,209 | INFO     | mean x: 1764215588.5
[2025-11-27 06:15:16] 2025-11-27 05:14:44,209 | INFO     | mean y: 2511496.94375
[2025-11-27 06:15:16] 2025-11-27 05:14:44,209 | INFO     | intersect: 75580424461.15648
[2025-11-27 06:15:16] 2025-11-27 05:14:44,209 | INFO     | chi2: 0.31034195864618186
[2025-11-27 06:15:16] 2025-11-27 05:14:44,209 | INFO     | current chi2=0.31034195864618186 (change=83.27950981839352 %)
[2025-11-27 06:15:16] 2025-11-27 05:14:44,209 | INFO     | sum of square deviations: 1154663510.0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,209 | INFO     | sum of deviations: -48304259710.0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | mean x: 1764215741.0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | mean y: 2503418.7806451614
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | intersect: 73806806230.54446
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | chi2: 0.3081611638812799
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | current chi2=0.3081611638812799 (change=0.70270703143569 %)
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | left removable region: 20
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | sum of square deviations: 832722590.0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | sum of deviations: -32256508725.0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | mean x: 1764215863.0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | mean y: 2484988.9712230214
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | intersect: 68341503361.99615
[2025-11-27 06:15:16] 2025-11-27 05:14:44,210 | INFO     | chi2: 0.27188622325258793
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | current memory leak: -38.74 B/s (using 139 data points, chi2=0.27)
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | could have reported an average CPU frequency of 3916 MHz (9 samples)
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | ..............................
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | . Timing measurements:
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | . get job = 0 s
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | . initial setup = 1 s
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | . payload setup = 3 s
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | . stage-in = 0 s
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | . payload execution = 10043 s
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | . stage-out = 0 s
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | . log creation = 0 s
[2025-11-27 06:15:16] 2025-11-27 05:14:44,211 | INFO     | ..............................
[2025-11-27 06:15:16] 2025-11-27 05:14:44,240 | INFO     | 
[2025-11-27 06:15:16] 2025-11-27 05:14:44,240 | INFO     | job summary report
[2025-11-27 06:15:16] 2025-11-27 05:14:44,240 | INFO     | --------------------------------------------------
[2025-11-27 06:15:16] 2025-11-27 05:14:44,240 | INFO     | PanDA job id: 6893935650
[2025-11-27 06:15:16] 2025-11-27 05:14:44,240 | INFO     | task id: 47523642
[2025-11-27 06:15:16] 2025-11-27 05:14:44,240 | INFO     | errors: (none)
[2025-11-27 06:15:16] 2025-11-27 05:14:44,240 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:15:16] 2025-11-27 05:14:44,240 | INFO     | pilot state: finished 
[2025-11-27 06:15:16] 2025-11-27 05:14:44,240 | INFO     | transexitcode: 0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,240 | INFO     | exeerrorcode: 0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | exeerrordiag: 
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | exitcode: 0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | exitmsg: OK
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | cpuconsumptiontime: 39048 s
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | nevents: 400
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | neventsw: 0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | pid: 3724577
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | pgrp: 3724577
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | corecount: 4
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | event service: False
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | sizes: {0: 2283969, 3: 2284231, 10: 2284259, 10050: 2313073, 10051: 2322077, 10053: 2322133, 10057: 2322519}
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | --------------------------------------------------
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | 
[2025-11-27 06:15:16] 2025-11-27 05:14:44,241 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 06:15:16] 2025-11-27 05:14:44,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | job 6893935650 has completed (purged errors)
[2025-11-27 06:15:16] 2025-11-27 05:14:44,254 | INFO     | overall cleanup function is called
[2025-11-27 06:15:16] 2025-11-27 05:14:45,261 | INFO     | --- collectZombieJob: --- 10, [3724577]
[2025-11-27 06:15:16] 2025-11-27 05:14:45,261 | INFO     | zombie collector waiting for pid 3724577
[2025-11-27 06:15:16] 2025-11-27 05:14:45,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:15:16] 2025-11-27 05:14:45,261 | INFO     | collected zombie processes
[2025-11-27 06:15:16] 2025-11-27 05:14:45,261 | INFO     | will attempt to kill all subprocesses of pid=3724577
[2025-11-27 06:15:16] 2025-11-27 05:14:45,325 | INFO     | process IDs to be killed: [3724577] (in reverse order)
[2025-11-27 06:15:16] 2025-11-27 05:14:45,359 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:15:16] 2025-11-27 05:14:45,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:15:16] 2025-11-27 05:14:45,362 | INFO     | did not find any defunct processes belonging to 3724577
[2025-11-27 06:15:16] 2025-11-27 05:14:45,364 | INFO     | did not find any defunct processes belonging to 3724577
[2025-11-27 06:15:16] 2025-11-27 05:14:45,364 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:15:16] 2025-11-27 05:14:45,364 | INFO     | ready for new job
[2025-11-27 06:15:16] 2025-11-27 05:14:45,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:15:16] 2025-11-27 05:14:45,365 | INFO     | ***************************************
[2025-11-27 06:15:16] 2025-11-27 05:14:45,365 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:15:16] 2025-11-27 05:14:45,365 | INFO     | ***************************************
[2025-11-27 06:15:16] 2025-11-27 05:14:45,365 | INFO     | 
[2025-11-27 06:15:16] 2025-11-27 05:14:45,366 | INFO     | architecture information:
[2025-11-27 06:15:16] 2025-11-27 05:14:45,366 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:15:16] 2025-11-27 05:14:45,377 | INFO     | cat /etc/os-release:
[2025-11-27 06:15:16] NAME="CentOS Linux"
[2025-11-27 06:15:16] VERSION="7 (Core)"
[2025-11-27 06:15:16] ID="centos"
[2025-11-27 06:15:16] ID_LIKE="rhel fedora"
[2025-11-27 06:15:16] VERSION_ID="7"
[2025-11-27 06:15:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:15:16] ANSI_COLOR="0;31"
[2025-11-27 06:15:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:15:16] HOME_URL="https://www.centos.org/"
[2025-11-27 06:15:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:15:16] 
[2025-11-27 06:15:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:15:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:15:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:15:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:15:16] 
[2025-11-27 06:15:16] 2025-11-27 05:14:45,377 | INFO     | ***************************************
[2025-11-27 06:15:16] 2025-11-27 05:14:45,880 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 06:15:16] 2025-11-27 05:14:45,892 | INFO     | sufficient remaining disk space (366447951872 B)
[2025-11-27 06:15:16] 2025-11-27 05:14:45,892 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:15:16] 2025-11-27 05:14:45,893 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:15:16] 2025-11-27 05:14:45,893 | INFO     | update_server=False
[2025-11-27 06:15:16] 2025-11-27 05:14:45,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:15:16] 2025-11-27 05:14:45,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:15:16] 2025-11-27 05:14:45,893 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:15:16] 2025-11-27 05:14:45,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:15:16] 2025-11-27 05:14:45,893 | INFO     | aborting loop
[2025-11-27 06:15:16] 2025-11-27 05:14:46,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:15:16] 2025-11-27 05:14:46,475 | INFO     | all data control threads have been joined
[2025-11-27 06:15:16] 2025-11-27 05:14:46,556 | INFO     | all payload control threads have been joined
[2025-11-27 06:15:16] 2025-11-27 05:14:46,898 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:46,899 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:46,899 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:46,906 | INFO     | all job control threads have been joined
[2025-11-27 06:15:16] 2025-11-27 05:14:46,997 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:47,481 | INFO     | [data] control thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:47,562 | INFO     | [payload] control thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:47,628 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:47,806 | INFO     | [job] validate thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:47,808 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:47,911 | INFO     | [job] control thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:47,918 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:47,938 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:48,044 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:48,046 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:48,244 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:14:49,900 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:15:16] 2025-11-27 05:15:02,965 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:15:16] 2025-11-27 05:15:03,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140201295533888)>', '<ExcThread(monitor, started 140200676157184)>']
[2025-11-27 06:15:16] 2025-11-27 05:15:08,584 | INFO     | all workflow threads have been joined
[2025-11-27 06:15:16] 2025-11-27 05:15:08,584 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:15:16] 2025-11-27 05:15:08,584 | INFO     | traces error code: 0
[2025-11-27 06:15:16] 2025-11-27 05:15:08,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:15:16] 2025-11-27 05:15:16,034 | INFO     | PID=3718018 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 06:15:16] 2025-11-27 05:15:16,034 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:15:16] 2025-11-27 05:15:16,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:15:16] 2025-11-27 05:15:16,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:15:16] 2025-11-27 05:15:16,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:15:16] 2025-11-27 05:15:16,034 | INFO     | [monitor] control thread has ended
[2025-11-27 06:15:16] 2025-11-27 05:15:16,087 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:15:16] 2025-11-27 05:15:16,090 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:15:16] 2025-11-27 05:15:16,093 [wrapper] pilotpid: 3718018
[2025-11-27 06:15:16] 2025-11-27 05:15:16,095 [wrapper] Pilot exit status: 0
[2025-11-27 06:15:16] 2025-11-27 05:15:16,103 [wrapper] pandaids: 6893935650
[2025-11-27 06:15:16] 2025-11-27 05:15:16,125 [wrapper] cleanup supervisor_pilot 3748444 3718019
[2025-11-27 06:15:16] 2025-11-27 05:15:16,128 [wrapper] Test setup, not cleaning
[2025-11-27 06:15:16] 2025-11-27 05:15:16,131 [wrapper] apfmon messages muted
[2025-11-27 06:15:16] 2025-11-27 05:15:16,133 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:15:16] 2025-11-27 05:15:16,136 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:15:16]  *** Error codes and diagnostics ***
[2025-11-27 06:15:16]     "exeErrorCode": 0,
[2025-11-27 06:15:16]     "exeErrorDiag": "",
[2025-11-27 06:15:16]     "pilotErrorCode": 0,
[2025-11-27 06:15:16]     "pilotErrorDiag": "",
[2025-11-27 06:15:16]  *** Listing of results directory ***
[2025-11-27 06:15:16] total 616812
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc    576529 Nov 21 14:17 pilot3.tar.gz
[2025-11-27 06:15:16] -rwx------ 1 boinc boinc     36292 Nov 21 14:27 runpilot2-wrapper.sh
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc      5112 Nov 21 14:27 queuedata.json
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc       100 Nov 27 03:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:15:16] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 03:26 run_atlas
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc       105 Nov 27 03:26 job.xml
[2025-11-27 06:15:16] -rw-r--r-- 2 boinc boinc 293349081 Nov 27 03:26 EVNT.47523640._000002.pool.root.1
[2025-11-27 06:15:16] -rw-r--r-- 2 boinc boinc    589952 Nov 27 03:26 input.tar.gz
[2025-11-27 06:15:16] -rw-r--r-- 2 boinc boinc     15847 Nov 27 03:26 start_atlas.sh
[2025-11-27 06:15:16] drwxrwx--x 2 boinc boinc      4096 Nov 27 03:26 shared
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc         0 Nov 27 03:26 boinc_setup_complete
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc      6448 Nov 27 03:26 init_data.xml
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc         0 Nov 27 03:26 boinc_lockfile
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc      2629 Nov 27 03:26 pandaJob.out
[2025-11-27 06:15:16] -rw------- 1 boinc boinc    991554 Nov 27 03:26 agis_schedconf.cvmfs.json
[2025-11-27 06:15:16] -rw------- 1 boinc boinc   1516240 Nov 27 03:26 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:15:16] drwx------ 5 boinc boinc      4096 Nov 27 03:26 pilot3
[2025-11-27 06:15:16] -rw------- 1 boinc boinc 330805563 Nov 27 06:14 HITS.47523642._000034.pool.root.1
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc       530 Nov 27 06:14 boinc_task_state.xml
[2025-11-27 06:15:16] -rw------- 1 boinc boinc      1018 Nov 27 06:14 memory_monitor_summary.json
[2025-11-27 06:15:16] -rw------- 1 boinc boinc    340203 Nov 27 06:14 log.47523642._000034.job.log.tgz.1
[2025-11-27 06:15:16] -rw------- 1 boinc boinc      7745 Nov 27 06:14 heartbeat.json
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc      8192 Nov 27 06:14 boinc_mmap_file
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc        28 Nov 27 06:14 wrapper_checkpoint.txt
[2025-11-27 06:15:16] -rw------- 1 boinc boinc       747 Nov 27 06:15 pilotlog.txt
[2025-11-27 06:15:16] -rw------- 1 boinc boinc        95 Nov 27 06:15 pilot_heartbeat.json
[2025-11-27 06:15:16] -rw------- 1 boinc boinc   1429780 Nov 27 06:15 log.47523642._000034.job.log.1
[2025-11-27 06:15:16] -rw------- 1 boinc boinc       357 Nov 27 06:15 output.list
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc       620 Nov 27 06:15 runtime_log
[2025-11-27 06:15:16] -rw------- 1 boinc boinc   1792000 Nov 27 06:15 result.tar.gz
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc      8898 Nov 27 06:15 runtime_log.err
[2025-11-27 06:15:16] -rw------- 1 boinc boinc       662 Nov 27 06:15 R0NODm1Lgg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTdHKDmwpN02n.diag
[2025-11-27 06:15:16] -rw-r--r-- 1 boinc boinc     21449 Nov 27 06:15 stderr.txt
[2025-11-27 06:15:16] HITS file was successfully produced:
[2025-11-27 06:15:16] -rw------- 1 boinc boinc 330805563 Nov 27 06:14 shared/HITS.pool.root.1
[2025-11-27 06:15:16]  *** Contents of shared directory: ***
[2025-11-27 06:15:16] total 611888
[2025-11-27 06:15:16] -rw-r--r-- 2 boinc boinc 293349081 Nov 27 03:26 ATLAS.root_0
[2025-11-27 06:15:16] -rw-r--r-- 2 boinc boinc    589952 Nov 27 03:26 input.tar.gz
[2025-11-27 06:15:16] -rw-r--r-- 2 boinc boinc     15847 Nov 27 03:26 start_atlas.sh
[2025-11-27 06:15:16] -rw------- 1 boinc boinc 330805563 Nov 27 06:14 HITS.pool.root.1
[2025-11-27 06:15:16] -rw------- 1 boinc boinc   1792000 Nov 27 06:15 result.tar.gz
06:15:17 (3714211): run_atlas exited; CPU time 39112.709816
06:15:17 (3714211): called boinc_finish(0)

</stderr_txt>
]]>

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