Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:05:41 (175441): wrapper (7.7.26015): starting
02:05:41 (175441): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 02:05:41] Arguments: --nthreads 12
[2025-11-22 02:05:41] Threads: 12
[2025-11-22 02:05:41] Checking for CVMFS
[2025-11-22 02:05:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 02:05:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 02:05:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 02:05:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 02:05:43] 2.11.5.0 2097640 22189 338752 153166 1 279 31364213 45568000 14196 130560 0 216948495 99.794 124280966 22337 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-22 02:05:43] CVMFS is ok
[2025-11-22 02:05:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 02:05:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 02:05:43] Further information can be found at the LHC@home message board.
[2025-11-22 02:05:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 02:05:43] Checking for apptainer binary...
[2025-11-22 02:05:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 02:05:43] Running /usr/bin/apptainer --version
[2025-11-22 02:05:43] apptainer version 1.4.1-1.el9
[2025-11-22 02:05:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 02:05:45] wns0049.triumf.lcg
[2025-11-22 02:05:45] apptainer works
[2025-11-22 02:05:45] Set ATHENA_PROC_NUMBER=12
[2025-11-22 02:05:45] Set ATHENA_CORE_NUMBER=12
[2025-11-22 02:05:45] Starting ATLAS job with PandaID=6895331156
[2025-11-22 02:05:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 02:13:22]  *** The last 200 lines of the pilot log: ***
[2025-11-22 02:13:22] 2025-11-22 10:12:15,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 02:13:22] 2025-11-22 10:12:15,706 | WARNING  | wrong length of table data, x=[1763806071.0, 1763806132.0], y=[22315.0, 790508.0] (must be same and length>=4)
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | could have reported an average CPU frequency of 2510 MHz (4 samples)
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | ..............................
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . Timing measurements:
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . get job = 0 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . initial setup = 4 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . payload setup = 22 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . stage-in = 0 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . payload execution = 143 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . stage-out = 1 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . log creation = 0 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | ..............................
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 02:13:22] 2025-11-22 10:12:15,708 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895331156/pilotlog.txt
[2025-11-22 02:13:22] 2025-11-22 10:12:15,742 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-22 02:13:22] - Log from pilotlog.txt -
[2025-11-22 02:13:22] 2025-11-22 10:12:15,656 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895331156/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 02:13:22] 2025-11-22 10:12:15,657 | INFO     | extracted standard info from prmon json
[2025-11-22 02:13:22] 2025-11-22 10:12:15,684 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 02:13:22] 2025-11-22 10:12:15,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 02:13:22] 2025-11-22 10:12:15,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 02:13:22] 2025-11-22 10:12:15,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 02:13:22] 2025-11-22 10:12:15,706 | WARNING  | wrong length of table data, x=[1763806071.0, 1763806132.0], y=[22315.0, 790508.0] (must be same and length>=4)
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | could have reported an average CPU frequency of 2510 MHz (4 samples)
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | ..............................
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . Timing measurements:
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . get job = 0 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . initial setup = 4 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . payload setup = 22 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . stage-in = 0 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . payload execution = 143 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . stage-out = 1 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . log creation = 0 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | ..............................
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 02:13:22] 2025-11-22 10:12:15,708 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895331156/pilotlog.txt
[2025-11-22 02:13:22] 2025-11-22 10:12:15,743 | WARNING  | 
[2025-11-22 02:13:22] [begin log extracts]
[2025-11-22 02:13:22] - Log from pilotlog.txt -
[2025-11-22 02:13:22] 2025-11-22 10:12:15,656 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895331156/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 02:13:22] 2025-11-22 10:12:15,657 | INFO     | extracted standard info from prmon json
[2025-11-22 02:13:22] 2025-11-22 10:12:15,684 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 02:13:22] 2025-11-22 10:12:15,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 02:13:22] 2025-11-22 10:12:15,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-22 02:13:22] 2025-11-22 10:12:15,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-22 02:13:22] 2025-11-22 10:12:15,706 | WARNING  | wrong length of table data, x=[1763806071.0, 1763806132.0], y=[22315.0, 790508.0] (must be same and length>=4)
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | could have reported an average CPU frequency of 2510 MHz (4 samples)
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | ..............................
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . Timing measurements:
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . get job = 0 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . initial setup = 4 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . payload setup = 22 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . stage-in = 0 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . payload execution = 143 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . stage-out = 1 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | . log creation = 0 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | ..............................
[2025-11-22 02:13:22] 2025-11-22 10:12:15,707 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-22 02:13:22] 2025-11-22 10:12:15,708 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895331156/pilotlog.txt
[2025-11-22 02:13:22] [end log extracts]
[2025-11-22 02:13:22] 2025-11-22 10:12:15,743 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-22 02:13:22] 2025-11-22 10:12:15,744 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | 
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | job summary report
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | --------------------------------------------------
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | PanDA job id: 6895331156
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | task id: 47556137
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-22 02:09:44,266 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | pilot state: failed 
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | transexitcode: 65
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | exeerrorcode: 65
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | exitcode: 65
[2025-11-22 02:13:22] 2025-11-22 10:12:15,843 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-22 02:13:22] 2025-11-22 10:12:15,844 | INFO     | cpuconsumptiontime: 47 s
[2025-11-22 02:13:22] 2025-11-22 10:12:15,844 | INFO     | nevents: 0
[2025-11-22 02:13:22] 2025-11-22 10:12:15,844 | INFO     | neventsw: 0
[2025-11-22 02:13:22] 2025-11-22 10:12:15,844 | INFO     | pid: 185753
[2025-11-22 02:13:22] 2025-11-22 10:12:15,844 | INFO     | pgrp: 185753
[2025-11-22 02:13:22] 2025-11-22 10:12:15,844 | INFO     | corecount: 12
[2025-11-22 02:13:22] 2025-11-22 10:12:15,844 | INFO     | event service: False
[2025-11-22 02:13:22] 2025-11-22 10:12:15,844 | INFO     | sizes: {0: 2298582, 1: 2298781, 11: 2298781, 20: 2299071, 23: 2299099, 169: 2324679, 172: 2328997, 313: 2329135}
[2025-11-22 02:13:22] 2025-11-22 10:12:15,844 | INFO     | --------------------------------------------------
[2025-11-22 02:13:22] 2025-11-22 10:12:15,844 | INFO     | 
[2025-11-22 02:13:22] 2025-11-22 10:12:15,844 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-22 02:13:22] 2025-11-22 10:12:16,064 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,065 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 02:13:22] 2025-11-22 10:12:16,066 | INFO     | job 6895331156 has completed (purged errors)
[2025-11-22 02:13:22] 2025-11-22 10:12:16,066 | INFO     | overall cleanup function is called
[2025-11-22 02:13:22] 2025-11-22 10:12:17,078 | INFO     | --- collectZombieJob: --- 10, [185753]
[2025-11-22 02:13:22] 2025-11-22 10:12:17,078 | INFO     | zombie collector waiting for pid 185753
[2025-11-22 02:13:22] 2025-11-22 10:12:17,078 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 02:13:22] 2025-11-22 10:12:17,079 | INFO     | collected zombie processes
[2025-11-22 02:13:22] 2025-11-22 10:12:17,079 | INFO     | will attempt to kill all subprocesses of pid=185753
[2025-11-22 02:13:22] 2025-11-22 10:12:17,417 | INFO     | process IDs to be killed: [185753] (in reverse order)
[2025-11-22 02:13:22] 2025-11-22 10:12:17,675 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 02:13:22] 2025-11-22 10:12:17,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 02:13:22] 2025-11-22 10:12:17,701 | INFO     | did not find any defunct processes belonging to 185753
[2025-11-22 02:13:22] 2025-11-22 10:12:17,766 | INFO     | did not find any defunct processes belonging to 185753
[2025-11-22 02:13:22] 2025-11-22 10:12:17,767 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 02:13:22] 2025-11-22 10:12:17,768 | INFO     | ready for new job
[2025-11-22 02:13:22] 2025-11-22 10:12:17,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 02:13:22] 2025-11-22 10:12:17,769 | INFO     | ***************************************
[2025-11-22 02:13:22] 2025-11-22 10:12:17,769 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 02:13:22] 2025-11-22 10:12:17,769 | INFO     | ***************************************
[2025-11-22 02:13:22] 2025-11-22 10:12:17,779 | INFO     | 
[2025-11-22 02:13:22] 2025-11-22 10:12:17,781 | INFO     | architecture information:
[2025-11-22 02:13:22] 2025-11-22 10:12:17,782 | INFO     | executing command: cat /etc/os-release
[2025-11-22 02:13:22] 2025-11-22 10:12:17,794 | INFO     | cat /etc/os-release:
[2025-11-22 02:13:22] NAME="CentOS Linux"
[2025-11-22 02:13:22] VERSION="7 (Core)"
[2025-11-22 02:13:22] ID="centos"
[2025-11-22 02:13:22] ID_LIKE="rhel fedora"
[2025-11-22 02:13:22] VERSION_ID="7"
[2025-11-22 02:13:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 02:13:22] ANSI_COLOR="0;31"
[2025-11-22 02:13:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 02:13:22] HOME_URL="https://www.centos.org/"
[2025-11-22 02:13:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 02:13:22] 
[2025-11-22 02:13:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 02:13:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 02:13:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 02:13:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 02:13:22] 
[2025-11-22 02:13:22] 2025-11-22 10:12:17,795 | INFO     | ***************************************
[2025-11-22 02:13:22] 2025-11-22 10:12:18,298 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-22 02:13:22] 2025-11-22 10:12:18,378 | INFO     | sufficient remaining disk space (1945670516736 B)
[2025-11-22 02:13:22] 2025-11-22 10:12:18,378 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 02:13:22] 2025-11-22 10:12:18,378 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 02:13:22] 2025-11-22 10:12:18,378 | INFO     | update_server=False
[2025-11-22 02:13:22] 2025-11-22 10:12:18,378 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 02:13:22] 2025-11-22 10:12:18,411 | INFO     | all data control threads have been joined
[2025-11-22 02:13:22] 2025-11-22 10:12:18,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 02:13:22] 2025-11-22 10:12:18,834 | INFO     | all payload control threads have been joined
[2025-11-22 02:13:22] 2025-11-22 10:12:18,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 02:13:22] 2025-11-22 10:12:18,855 | INFO     | aborting loop
[2025-11-22 02:13:22] 2025-11-22 10:12:19,063 | INFO     | all job control threads have been joined
[2025-11-22 02:13:22] 2025-11-22 10:12:19,384 | INFO     | [job] retrieve thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:19,417 | INFO     | [data] control thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:19,449 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:19,841 | INFO     | [payload] control thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:19,861 | INFO     | [job] job monitor thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:19,875 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:20,069 | INFO     | [job] control thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:20,274 | INFO     | [payload] validate_post thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:20,275 | INFO     | [payload] failed_post thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:20,489 | INFO     | [data] copytool_out thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:20,777 | INFO     | [job] validate thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:20,796 | INFO     | [data] copytool_in thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:20,798 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:20,840 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:20,860 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 02:13:22] 2025-11-22 10:12:21,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 02:13:22] 2025-11-22 10:12:21,866 | INFO     | [job] queue monitor thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:25,047 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 02:13:22] 2025-11-22 10:12:48,801 | INFO     | PID=179123 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 02:13:22] 2025-11-22 10:12:48,801 | INFO     | .. there are 14 such processes running
[2025-11-22 02:13:22] 2025-11-22 10:12:48,802 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 02:13:22] 2025-11-22 10:12:48,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 02:13:22] 2025-11-22 10:12:48,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 02:13:22] 2025-11-22 10:13:14,969 | INFO     | [monitor] cgroup control has ended
[2025-11-22 02:13:22] 2025-11-22 10:13:16,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139793239181120)>', '<ExcThread(monitor, started 139792260003584)>']
[2025-11-22 02:13:22] 2025-11-22 10:13:16,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 02:13:22] 2025-11-22 10:13:16,976 | INFO     | [monitor] control thread has ended
[2025-11-22 02:13:22] 2025-11-22 10:13:21,565 | INFO     | all workflow threads have been joined
[2025-11-22 02:13:22] 2025-11-22 10:13:21,565 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 02:13:22] 2025-11-22 10:13:21,566 | INFO     | traces error code: 0
[2025-11-22 02:13:22] 2025-11-22 10:13:21,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 02:13:22] 2025-11-22 10:13:21,817 [wrapper] ==== pilot stdout END ====
[2025-11-22 02:13:22] 2025-11-22 10:13:21,844 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 02:13:22] 2025-11-22 10:13:21,863 [wrapper] pilotpid: 179123
[2025-11-22 02:13:22] 2025-11-22 10:13:21,883 [wrapper] Pilot exit status: 0
[2025-11-22 02:13:22] 2025-11-22 10:13:22,004 [wrapper] pandaids: 6895331156
[2025-11-22 02:13:22] 2025-11-22 10:13:22,112 [wrapper] cleanup supervisor_pilot  179129 179124
[2025-11-22 02:13:22] 2025-11-22 10:13:22,114 [wrapper] Test setup, not cleaning
[2025-11-22 02:13:22] 2025-11-22 10:13:22,116 [wrapper] apfmon messages muted
[2025-11-22 02:13:22] 2025-11-22 10:13:22,118 [wrapper] ==== wrapper stdout END ====
[2025-11-22 02:13:22] 2025-11-22 10:13:22,120 [wrapper] ==== wrapper stderr END ====
[2025-11-22 02:13:22]  *** Error codes and diagnostics ***
[2025-11-22 02:13:22]     "exeErrorCode": 65,
[2025-11-22 02:13:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-22 02:13:22]     "pilotErrorCode": 1305,
[2025-11-22 02:13:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-22 02:13:22]  *** Listing of results directory ***
[2025-11-22 02:13:22] total 404932
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc    576529 Nov 21 14:39 pilot3.tar.gz
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc      5112 Nov 21 15:02 queuedata.json
[2025-11-22 02:13:22] -rwx------. 1 boinc boinc     36292 Nov 21 15:04 runpilot2-wrapper.sh
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc       100 Nov 22 02:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 02:13:22] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 02:05 run_atlas
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc       105 Nov 22 02:05 job.xml
[2025-11-22 02:13:22] -rw-r--r--. 2 boinc boinc 410405260 Nov 22 02:05 EVNT.47483658._000162.pool.root.1
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc      6594 Nov 22 02:05 init_data.xml
[2025-11-22 02:13:22] -rw-r--r--. 2 boinc boinc     15847 Nov 22 02:05 start_atlas.sh
[2025-11-22 02:13:22] drwxrwx--x. 2 boinc boinc      4096 Nov 22 02:05 shared
[2025-11-22 02:13:22] -rw-r--r--. 2 boinc boinc    590103 Nov 22 02:05 input.tar.gz
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc         0 Nov 22 02:05 boinc_lockfile
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc      2785 Nov 22 02:05 pandaJob.out
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc    989768 Nov 22 02:06 agis_schedconf.cvmfs.json
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc   1526164 Nov 22 02:06 agis_ddmendpoints.agis.ALL.json
[2025-11-22 02:13:22] drwx------. 5 boinc boinc      4096 Nov 22 02:06 pilot3
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc       525 Nov 22 02:09 boinc_task_state.xml
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc      1008 Nov 22 02:09 memory_monitor_summary.json
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc     49977 Nov 22 02:09 log.47556137._001618.job.log.tgz.1
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc     10342 Nov 22 02:12 heartbeat.json
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc        95 Nov 22 02:12 pilot_heartbeat.json
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc      8192 Nov 22 02:13 boinc_mmap_file
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc        23 Nov 22 02:13 wrapper_checkpoint.txt
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc      4822 Nov 22 02:13 pilotlog.txt
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc    110636 Nov 22 02:13 log.47556137._001618.job.log.1
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc       186 Nov 22 02:13 output.list
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc       620 Nov 22 02:13 runtime_log
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc    184320 Nov 22 02:13 result.tar.gz
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc       645 Nov 22 02:13 z9fKDmZMpg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIlJKDmOAoK2m.diag
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc      8636 Nov 22 02:13 runtime_log.err
[2025-11-22 02:13:22] -rw-r--r--. 1 boinc boinc     21703 Nov 22 02:13 stderr.txt
[2025-11-22 02:13:22] No HITS result produced
[2025-11-22 02:13:22]  *** Contents of shared directory: ***
[2025-11-22 02:13:22] total 401568
[2025-11-22 02:13:22] -rw-r--r--. 2 boinc boinc 410405260 Nov 22 02:05 ATLAS.root_0
[2025-11-22 02:13:22] -rw-r--r--. 2 boinc boinc     15847 Nov 22 02:05 start_atlas.sh
[2025-11-22 02:13:22] -rw-r--r--. 2 boinc boinc    590103 Nov 22 02:05 input.tar.gz
[2025-11-22 02:13:22] -rw-------. 1 boinc boinc    184320 Nov 22 02:13 result.tar.gz
02:13:24 (175441): run_atlas exited; CPU time 52.857467
02:13:24 (175441): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN