Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:18:59 (18781): wrapper (7.7.26015): starting
01:18:59 (18781): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 01:18:59] Arguments: --nthreads 12
[2025-11-23 01:18:59] Threads: 12
[2025-11-23 01:18:59] Checking for CVMFS
[2025-11-23 01:18:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:18:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:18:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:19:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:19:02] 2.13.3.0 5957 1911 105472 153192 1 81 4778974 102400001 1369 130560 29 5875681 99.995 76675 12 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-23 01:19:02] CVMFS is ok
[2025-11-23 01:19:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 01:19:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 01:19:02] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-23 01:19:02] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-23 01:19:02] Further information can be found at the LHC@home message board.
[2025-11-23 01:19:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:19:02] Checking for apptainer binary...
[2025-11-23 01:19:02] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin)
[2025-11-23 01:19:02] apptainer is not installed, using version from CVMFS
[2025-11-23 01:19:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:19:03] crocidura-russula
[2025-11-23 01:19:03] apptainer works
[2025-11-23 01:19:03] Set ATHENA_PROC_NUMBER=12
[2025-11-23 01:19:03] Set ATHENA_CORE_NUMBER=12
[2025-11-23 01:19:03] Starting ATLAS job with PandaID=6895323727
[2025-11-23 01:19:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/virtma/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 03:57:48]  *** The last 200 lines of the pilot log: ***
[2025-11-23 03:57:48] 2025-11-23 03:57:11,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:57:48] 2025-11-23 03:57:12,824 | INFO     | time since job start (9468s) is within the limit (172800.0s)
[2025-11-23 03:57:48] 2025-11-23 03:57:13,847 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:57:48] 2025-11-23 03:57:13,847 | INFO     | job 6895323727 has state=finished
[2025-11-23 03:57:48] 2025-11-23 03:57:13,847 | INFO     | preparing for final server update for job 6895323727 in state='finished'
[2025-11-23 03:57:48] 2025-11-23 03:57:13,847 | INFO     | this job has now completed (state=finished)
[2025-11-23 03:57:48] 2025-11-23 03:57:13,847 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-23 03:57:48] 2025-11-23 03:57:13,848 | INFO     | log transfer has been attempted: DONE
[2025-11-23 03:57:48] 2025-11-23 03:57:13,848 | INFO     | job 6895323727 has finished - writing final server update
[2025-11-23 03:57:48] 2025-11-23 03:57:13,848 | INFO     | total number of processed events: 1000 (read)
[2025-11-23 03:57:48] 2025-11-23 03:57:13,848 | INFO     | executing command: lscpu
[2025-11-23 03:57:48] 2025-11-23 03:57:13,866 | INFO     | monitor loop #710: job 0:6895323727 is in state 'finished'
[2025-11-23 03:57:48] 2025-11-23 03:57:13,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:57:48] 2025-11-23 03:57:13,869 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-23 03:57:48] 2025-11-23 03:57:14,830 | INFO     | time since job start (9470s) is within the limit (172800.0s)
[2025-11-23 03:57:48] 2025-11-23 03:57:16,369 | INFO     | monitor loop #711: job 0:6895323727 is in state 'finished'
[2025-11-23 03:57:48] 2025-11-23 03:57:16,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 03:57:48] 2025-11-23 03:57:16,421 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 03:57:48] 2025-11-23 03:57:16,424 | INFO     | found 24 cores (24 cores per socket, 1 socket) HT, CPU MHz: 3652.7581875
[2025-11-23 03:57:48] 2025-11-23 03:57:16,428 | INFO     | using path: /virtma/boinc/slots/2/PanDA_Pilot-6895323727/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 03:57:48] 2025-11-23 03:57:16,429 | INFO     | extracted standard info from prmon json
[2025-11-23 03:57:48] 2025-11-23 03:57:16,429 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 03:57:48] 2025-11-23 03:57:16,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 03:57:48] 2025-11-23 03:57:16,430 | INFO     | fitting pss+swap vs Time
[2025-11-23 03:57:48] 2025-11-23 03:57:16,430 | INFO     | sum of square deviations: 1154653021.896779
[2025-11-23 03:57:48] 2025-11-23 03:57:16,431 | INFO     | sum of deviations: 328499051385.5679
[2025-11-23 03:57:48] 2025-11-23 03:57:16,431 | INFO     | mean x: 1763865479.0258064
[2025-11-23 03:57:48] 2025-11-23 03:57:16,431 | INFO     | mean y: 3016680.858064516
[2025-11-23 03:57:48] 2025-11-23 03:57:16,431 | INFO     | intersect: -501817119449.63574
[2025-11-23 03:57:48] 2025-11-23 03:57:16,431 | INFO     | chi2: 15.982232057157105
[2025-11-23 03:57:48] 2025-11-23 03:57:16,431 | INFO     | sum of square deviations: 1046475469.3933299
[2025-11-23 03:57:48] 2025-11-23 03:57:16,431 | INFO     | sum of deviations: 344700959289.6334
[2025-11-23 03:57:48] 2025-11-23 03:57:16,431 | INFO     | mean x: 1763865326.5266666
[2025-11-23 03:57:48] 2025-11-23 03:57:16,431 | INFO     | mean y: 3038745.966666667
[2025-11-23 03:57:48] 2025-11-23 03:57:16,431 | INFO     | intersect: -581000613890.0021
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | chi2: 13.825634070551702
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | current chi2=13.825634070551702 (change=13.493722146523604 %)
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | right removable region: 149
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | sum of square deviations: 1046473029.3933299
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | sum of deviations: 272402623915.0668
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | mean x: 1763865631.5266666
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | mean y: 3095646.7333333334
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | intersect: -459140726282.456
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | chi2: 13.425261221932914
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | current chi2=13.425261221932914 (change=15.998834368564548 %)
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | left removable region: 10
[2025-11-23 03:57:48] 2025-11-23 03:57:16,432 | INFO     | sum of square deviations: 832711125.884891
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | sum of deviations: 236588662673.99283
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | mean x: 1763865601.028777
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | mean y: 3198305.2517985613
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | intersect: -501143706920.2507
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | chi2: 9.55981617068258
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | current memory leak: 284.12 B/s (using 139 data points, chi2=9.56)
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | could have reported an average CPU frequency of 4160 MHz (9 samples)
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | ..............................
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | . Timing measurements:
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | . get job = 0 s
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | . initial setup = 16 s
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | . payload setup = 2 s
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | . stage-in = 0 s
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | . payload execution = 9447 s
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | . stage-out = 0 s
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | . log creation = 0 s
[2025-11-23 03:57:48] 2025-11-23 03:57:16,433 | INFO     | ..............................
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | 
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | job summary report
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | --------------------------------------------------
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | PanDA job id: 6895323727
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | task id: 47556137
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | errors: (none)
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | pilot state: finished 
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | transexitcode: 0
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | exeerrorcode: 0
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | exeerrordiag: 
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | exitcode: 0
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | exitmsg: OK
[2025-11-23 03:57:48] 2025-11-23 03:57:16,466 | INFO     | cpuconsumptiontime: 88912 s
[2025-11-23 03:57:48] 2025-11-23 03:57:16,467 | INFO     | nevents: 1000
[2025-11-23 03:57:48] 2025-11-23 03:57:16,467 | INFO     | neventsw: 0
[2025-11-23 03:57:48] 2025-11-23 03:57:16,467 | INFO     | pid: 31643
[2025-11-23 03:57:48] 2025-11-23 03:57:16,467 | INFO     | pgrp: 31643
[2025-11-23 03:57:48] 2025-11-23 03:57:16,467 | INFO     | corecount: 12
[2025-11-23 03:57:48] 2025-11-23 03:57:16,467 | INFO     | event service: False
[2025-11-23 03:57:48] 2025-11-23 03:57:16,467 | INFO     | sizes: {0: 2298626, 1: 2298825, 3: 2299087, 11: 2299115, 9454: 2337546, 9460: 2337800}
[2025-11-23 03:57:48] 2025-11-23 03:57:16,467 | INFO     | --------------------------------------------------
[2025-11-23 03:57:48] 2025-11-23 03:57:16,467 | INFO     | 
[2025-11-23 03:57:48] 2025-11-23 03:57:16,467 | INFO     | executing command: ls -lF /virtma/boinc/slots/2
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 03:57:48] 2025-11-23 03:57:16,478 | INFO     | job 6895323727 has completed (purged errors)
[2025-11-23 03:57:48] 2025-11-23 03:57:16,479 | INFO     | overall cleanup function is called
[2025-11-23 03:57:48] 2025-11-23 03:57:17,490 | INFO     | --- collectZombieJob: --- 10, [31643]
[2025-11-23 03:57:48] 2025-11-23 03:57:17,491 | INFO     | zombie collector waiting for pid 31643
[2025-11-23 03:57:48] 2025-11-23 03:57:17,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 03:57:48] 2025-11-23 03:57:17,491 | INFO     | collected zombie processes
[2025-11-23 03:57:48] 2025-11-23 03:57:17,491 | INFO     | will attempt to kill all subprocesses of pid=31643
[2025-11-23 03:57:48] 2025-11-23 03:57:17,561 | INFO     | process IDs to be killed: [31643] (in reverse order)
[2025-11-23 03:57:48] 2025-11-23 03:57:17,592 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 03:57:48] 2025-11-23 03:57:17,592 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 03:57:48] 2025-11-23 03:57:17,595 | INFO     | did not find any defunct processes belonging to 31643
[2025-11-23 03:57:48] 2025-11-23 03:57:17,596 | INFO     | did not find any defunct processes belonging to 31643
[2025-11-23 03:57:48] 2025-11-23 03:57:17,597 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 03:57:48] 2025-11-23 03:57:17,597 | INFO     | ready for new job
[2025-11-23 03:57:48] 2025-11-23 03:57:17,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 03:57:48] 2025-11-23 03:57:17,598 | INFO     | ***************************************
[2025-11-23 03:57:48] 2025-11-23 03:57:17,598 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 03:57:48] 2025-11-23 03:57:17,598 | INFO     | ***************************************
[2025-11-23 03:57:48] 2025-11-23 03:57:17,598 | INFO     | 
[2025-11-23 03:57:48] 2025-11-23 03:57:17,599 | INFO     | architecture information:
[2025-11-23 03:57:48] 2025-11-23 03:57:17,599 | INFO     | executing command: cat /etc/os-release
[2025-11-23 03:57:48] 2025-11-23 03:57:17,606 | INFO     | cat /etc/os-release:
[2025-11-23 03:57:48] NAME="CentOS Linux"
[2025-11-23 03:57:48] VERSION="7 (Core)"
[2025-11-23 03:57:48] ID="centos"
[2025-11-23 03:57:48] ID_LIKE="rhel fedora"
[2025-11-23 03:57:48] VERSION_ID="7"
[2025-11-23 03:57:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 03:57:48] ANSI_COLOR="0;31"
[2025-11-23 03:57:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 03:57:48] HOME_URL="https://www.centos.org/"
[2025-11-23 03:57:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 03:57:48] 
[2025-11-23 03:57:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 03:57:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 03:57:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 03:57:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 03:57:48] 
[2025-11-23 03:57:48] 2025-11-23 03:57:17,607 | INFO     | ***************************************
[2025-11-23 03:57:48] 2025-11-23 03:57:18,109 | INFO     | executing command: df -mP /virtma/boinc/slots/2
[2025-11-23 03:57:48] 2025-11-23 03:57:18,119 | INFO     | sufficient remaining disk space (967432994816 B)
[2025-11-23 03:57:48] 2025-11-23 03:57:18,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 03:57:48] 2025-11-23 03:57:18,119 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 03:57:48] 2025-11-23 03:57:18,119 | INFO     | update_server=False
[2025-11-23 03:57:48] 2025-11-23 03:57:18,119 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 03:57:48] 2025-11-23 03:57:18,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 03:57:48] 2025-11-23 03:57:18,120 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:57:48] 2025-11-23 03:57:18,120 | INFO     | aborting loop
[2025-11-23 03:57:48] 2025-11-23 03:57:18,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 03:57:48] 2025-11-23 03:57:18,538 | INFO     | all job control threads have been joined
[2025-11-23 03:57:48] 2025-11-23 03:57:19,125 | INFO     | [job] retrieve thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:19,125 | INFO     | [job] job monitor thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:19,125 | INFO     | [job] queue monitor thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:19,164 | INFO     | all data control threads have been joined
[2025-11-23 03:57:48] 2025-11-23 03:57:19,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 03:57:48] 2025-11-23 03:57:19,510 | INFO     | [job] validate thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:19,523 | INFO     | [payload] validate_post thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:19,524 | INFO     | all payload control threads have been joined
[2025-11-23 03:57:48] 2025-11-23 03:57:19,526 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:19,544 | INFO     | [job] control thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:19,568 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:19,786 | INFO     | [payload] failed_post thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:20,069 | INFO     | [data] copytool_in thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:20,169 | INFO     | [data] control thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:20,491 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:20,529 | INFO     | [payload] control thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:21,329 | INFO     | [data] copytool_out thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:22,125 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:29,038 | INFO     | job.realtimelogging is not enabled
[2025-11-23 03:57:48] 2025-11-23 03:57:30,043 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 03:57:48] 2025-11-23 03:57:38,258 | INFO     | [monitor] cgroup control has ended
[2025-11-23 03:57:48] 2025-11-23 03:57:39,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350637995840)>', '<ExcThread(monitor, started 140350085633792)>']
[2025-11-23 03:57:48] 2025-11-23 03:57:44,780 | INFO     | all workflow threads have been joined
[2025-11-23 03:57:48] 2025-11-23 03:57:44,780 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 03:57:48] 2025-11-23 03:57:44,780 | INFO     | traces error code: 0
[2025-11-23 03:57:48] 2025-11-23 03:57:44,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 03:57:48] 2025-11-23 03:57:47,982 | INFO     | PID=22688 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-23 03:57:48] 2025-11-23 03:57:47,983 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 03:57:48] 2025-11-23 03:57:47,983 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 03:57:48] 2025-11-23 03:57:47,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 03:57:48] 2025-11-23 03:57:47,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 03:57:48] 2025-11-23 03:57:47,983 | INFO     | [monitor] control thread has ended
[2025-11-23 03:57:48] 2025-11-23 03:57:48,045 [wrapper] ==== pilot stdout END ====
[2025-11-23 03:57:48] 2025-11-23 03:57:48,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 03:57:48] 2025-11-23 03:57:48,048 [wrapper] pilotpid: 22688
[2025-11-23 03:57:48] 2025-11-23 03:57:48,050 [wrapper] Pilot exit status: 0
[2025-11-23 03:57:48] 2025-11-23 03:57:48,056 [wrapper] pandaids: 6895323727
[2025-11-23 03:57:48] 2025-11-23 03:57:48,074 [wrapper] cleanup supervisor_pilot  9396 22689
[2025-11-23 03:57:48] 2025-11-23 03:57:48,076 [wrapper] Test setup, not cleaning
[2025-11-23 03:57:48] 2025-11-23 03:57:48,077 [wrapper] apfmon messages muted
[2025-11-23 03:57:48] 2025-11-23 03:57:48,079 [wrapper] ==== wrapper stdout END ====
[2025-11-23 03:57:48] 2025-11-23 03:57:48,080 [wrapper] ==== wrapper stderr END ====
[2025-11-23 03:57:48]  *** Error codes and diagnostics ***
[2025-11-23 03:57:48]     "exeErrorCode": 0,
[2025-11-23 03:57:48]     "exeErrorDiag": "",
[2025-11-23 03:57:48]     "pilotErrorCode": 0,
[2025-11-23 03:57:48]     "pilotErrorDiag": "",
[2025-11-23 03:57:48]  *** Listing of results directory ***
[2025-11-23 03:57:48] total 1282672
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc    576529 Nov 21 13:17 pilot3.tar.gz
[2025-11-23 03:57:48] -rwx------ 1 boinc boinc     36292 Nov 21 13:31 runpilot2-wrapper.sh
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc      5112 Nov 21 13:31 queuedata.json
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc       100 Nov 23 01:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 03:57:48] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 01:18 run_atlas
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc       105 Nov 23 01:18 job.xml
[2025-11-23 03:57:48] -rw-r--r-- 2 boinc boinc     15847 Nov 23 01:18 start_atlas.sh
[2025-11-23 03:57:48] drwxrwx--x 2 boinc boinc        68 Nov 23 01:18 shared
[2025-11-23 03:57:48] -rw-r--r-- 2 boinc boinc    590086 Nov 23 01:18 input.tar.gz
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc      8919 Nov 23 01:18 init_data.xml
[2025-11-23 03:57:48] -rw-r--r-- 2 boinc boinc 406513271 Nov 23 01:18 EVNT.47483658._000005.pool.root.1
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc         0 Nov 23 01:18 boinc_setup_complete
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc         0 Nov 23 01:18 boinc_lockfile
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc      2781 Nov 23 01:19 pandaJob.out
[2025-11-23 03:57:48] -rw------- 1 boinc boinc    989784 Nov 23 01:19 agis_schedconf.cvmfs.json
[2025-11-23 03:57:48] -rw------- 1 boinc boinc   1526164 Nov 23 01:19 agis_ddmendpoints.agis.ALL.json
[2025-11-23 03:57:48] drwx------ 5 boinc boinc      4096 Nov 23 01:19 pilot3
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc       530 Nov 23 03:53 boinc_task_state.xml
[2025-11-23 03:57:48] -rw------- 1 boinc boinc 896535955 Nov 23 03:56 HITS.47556137._000050.pool.root.1
[2025-11-23 03:57:48] -rw------- 1 boinc boinc      1038 Nov 23 03:57 memory_monitor_summary.json
[2025-11-23 03:57:48] -rw------- 1 boinc boinc   1894470 Nov 23 03:57 log.47556137._000050.job.log.tgz.1
[2025-11-23 03:57:48] -rw------- 1 boinc boinc      8601 Nov 23 03:57 heartbeat.json
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc      8192 Nov 23 03:57 boinc_mmap_file
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc        27 Nov 23 03:57 wrapper_checkpoint.txt
[2025-11-23 03:57:48] -rw------- 1 boinc boinc       745 Nov 23 03:57 pilotlog.txt
[2025-11-23 03:57:48] -rw------- 1 boinc boinc        95 Nov 23 03:57 pilot_heartbeat.json
[2025-11-23 03:57:48] -rw------- 1 boinc boinc   1356870 Nov 23 03:57 log.47556137._000050.job.log.1
[2025-11-23 03:57:48] -rw------- 1 boinc boinc       353 Nov 23 03:57 output.list
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc       620 Nov 23 03:57 runtime_log
[2025-11-23 03:57:48] -rw------- 1 boinc boinc   3266560 Nov 23 03:57 result.tar.gz
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc      8813 Nov 23 03:57 runtime_log.err
[2025-11-23 03:57:48] -rw------- 1 boinc boinc       658 Nov 23 03:57 R7rKDmzPgg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRSJKDmWY39Xm.diag
[2025-11-23 03:57:48] -rw-r--r-- 1 boinc boinc     22069 Nov 23 03:57 stderr.txt
[2025-11-23 03:57:48] HITS file was successfully produced:
[2025-11-23 03:57:48] -rw------- 1 boinc boinc 896535955 Nov 23 03:56 shared/HITS.pool.root.1
[2025-11-23 03:57:48]  *** Contents of shared directory: ***
[2025-11-23 03:57:48] total 1276300
[2025-11-23 03:57:48] -rw-r--r-- 2 boinc boinc     15847 Nov 23 01:18 start_atlas.sh
[2025-11-23 03:57:48] -rw-r--r-- 2 boinc boinc    590086 Nov 23 01:18 input.tar.gz
[2025-11-23 03:57:48] -rw-r--r-- 2 boinc boinc 406513271 Nov 23 01:18 ATLAS.root_0
[2025-11-23 03:57:48] -rw------- 1 boinc boinc 896535955 Nov 23 03:56 HITS.pool.root.1
[2025-11-23 03:57:48] -rw------- 1 boinc boinc   3266560 Nov 23 03:57 result.tar.gz
03:57:49 (18781): run_atlas exited; CPU time 88885.962593
03:57:49 (18781): called boinc_finish(0)

</stderr_txt>
]]>

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