Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:58:15 (344723): wrapper (7.7.26015): starting
05:58:15 (344723): wrapper: running run_atlas (--nthreads 2)
[2025-11-27 05:58:15] Arguments: --nthreads 2
[2025-11-27 05:58:15] Threads: 2
[2025-11-27 05:58:15] Checking for CVMFS
[2025-11-27 05:58:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:58:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:58:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:58:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:58:15] 2.9.2.0 3080669 12403 58028 153347 2 81 36282417 36864001 0 130560 0 3978905 99.933 602493 4951 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 05:58:15] CVMFS is ok
[2025-11-27 05:58:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:58:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:58:15] Further information can be found at the LHC@home message board.
[2025-11-27 05:58:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:58:15] Checking for apptainer binary...
[2025-11-27 05:58:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:58:15] Running /usr/bin/apptainer --version
[2025-11-27 05:58:15] apptainer version 1.4.2-1.1
[2025-11-27 05:58:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:58:15] itA173
[2025-11-27 05:58:15] apptainer works
[2025-11-27 05:58:15] Set ATHENA_PROC_NUMBER=2
[2025-11-27 05:58:15] Set ATHENA_CORE_NUMBER=2
[2025-11-27 05:58:15] Starting ATLAS job with PandaID=6895323641
[2025-11-27 05:58:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:44:31]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:44:31] 2025-11-27 16:43:33,235 | INFO     | monitor loop #3226: job 0:6895323641 is in state 'finished'
[2025-11-27 17:44:31] 2025-11-27 16:43:33,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:44:31] 2025-11-27 16:43:34,730 | INFO     | time since job start (42307s) is within the limit (172800.0s)
[2025-11-27 17:44:31] 2025-11-27 16:43:35,153 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 17:44:31] 2025-11-27 16:43:35,153 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4585.06625
[2025-11-27 17:44:31] 2025-11-27 16:43:35,154 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895323641/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:44:31] 2025-11-27 16:43:35,154 | INFO     | extracted standard info from prmon json
[2025-11-27 17:44:31] 2025-11-27 16:43:35,154 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:44:31] 2025-11-27 16:43:35,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:44:31] 2025-11-27 16:43:35,158 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:44:31] 2025-11-27 16:43:35,158 | INFO     | sum of square deviations: 103199412162.0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,162 | INFO     | sum of deviations: 316853643525.0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,162 | INFO     | mean x: 1764240638.0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,162 | INFO     | mean y: 2016388.12987013
[2025-11-27 17:44:31] 2025-11-27 16:43:35,162 | INFO     | intersect: -5414739991.525239
[2025-11-27 17:44:31] 2025-11-27 16:43:35,163 | INFO     | chi2: 3.033503449189851
[2025-11-27 17:44:31] 2025-11-27 16:43:35,163 | INFO     | sum of square deviations: 100981733372.0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,167 | INFO     | sum of deviations: 375351187210.99994
[2025-11-27 17:44:31] 2025-11-27 16:43:35,167 | INFO     | mean x: 1764240485.5
[2025-11-27 17:44:31] 2025-11-27 16:43:35,167 | INFO     | mean y: 2020396.386627907
[2025-11-27 17:44:31] 2025-11-27 16:43:35,167 | INFO     | intersect: -6555697902.215602
[2025-11-27 17:44:31] 2025-11-27 16:43:35,167 | INFO     | chi2: 2.237663258626687
[2025-11-27 17:44:31] 2025-11-27 16:43:35,167 | INFO     | current chi2=2.237663258626687 (change=26.23501848253071 %)
[2025-11-27 17:44:31] 2025-11-27 16:43:35,168 | INFO     | sum of square deviations: 98796055182.0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,172 | INFO     | sum of deviations: 372794273573.99994
[2025-11-27 17:44:31] 2025-11-27 16:43:35,172 | INFO     | mean x: 1764240333.0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,172 | INFO     | mean y: 2020217.9824304539
[2025-11-27 17:44:31] 2025-11-27 16:43:35,172 | INFO     | intersect: -6655114949.399386
[2025-11-27 17:44:31] 2025-11-27 16:43:35,172 | INFO     | chi2: 2.235723310963281
[2025-11-27 17:44:31] 2025-11-27 16:43:35,172 | INFO     | current chi2=2.235723310963281 (change=0.08669524585199213 %)
[2025-11-27 17:44:31] 2025-11-27 16:43:35,172 | INFO     | right removable region: 682
[2025-11-27 17:44:31] 2025-11-27 16:43:35,172 | INFO     | sum of square deviations: 100981733372.0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,176 | INFO     | sum of deviations: 191649714630.49997
[2025-11-27 17:44:31] 2025-11-27 16:43:35,176 | INFO     | mean x: 1764240790.5
[2025-11-27 17:44:31] 2025-11-27 16:43:35,177 | INFO     | mean y: 2024987.3968023255
[2025-11-27 17:44:31] 2025-11-27 16:43:35,177 | INFO     | intersect: -3346266161.3919435
[2025-11-27 17:44:31] 2025-11-27 16:43:35,177 | INFO     | chi2: 1.1125247903912208
[2025-11-27 17:44:31] 2025-11-27 16:43:35,177 | INFO     | current chi2=1.1125247903912208 (change=63.32541534810717 %)
[2025-11-27 17:44:31] 2025-11-27 16:43:35,177 | INFO     | sum of square deviations: 98796055182.0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,181 | INFO     | sum of deviations: 155244651507.00003
[2025-11-27 17:44:31] 2025-11-27 16:43:35,181 | INFO     | mean x: 1764240943.0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,181 | INFO     | mean y: 2027518.9048316253
[2025-11-27 17:44:31] 2025-11-27 16:43:35,181 | INFO     | intersect: -2770238740.773894
[2025-11-27 17:44:31] 2025-11-27 16:43:35,181 | INFO     | chi2: 0.8698047057421141
[2025-11-27 17:44:31] 2025-11-27 16:43:35,182 | INFO     | current chi2=0.8698047057421141 (change=21.81704953862231 %)
[2025-11-27 17:44:31] 2025-11-27 16:43:35,182 | INFO     | left removable region: 20
[2025-11-27 17:44:31] 2025-11-27 16:43:35,182 | INFO     | sum of square deviations: 89960404865.5
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | sum of deviations: 189691485218.99994
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | mean x: 1764240912.5
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | mean y: 2033234.6314199397
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | intersect: -3718064284.6783457
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | chi2: 0.05445170922577699
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | current memory leak: 2.11 B/s (using 662 data points, chi2=0.05)
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | could have reported an average CPU frequency of 4568 MHz (27 samples)
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | ..............................
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | . Timing measurements:
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | . get job = 0 s
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | . initial setup = 1 s
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | . payload setup = 5 s
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | . stage-in = 0 s
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | . payload execution = 42273 s
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | . stage-out = 1 s
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | . log creation = 0 s
[2025-11-27 17:44:31] 2025-11-27 16:43:35,186 | INFO     | ..............................
[2025-11-27 17:44:31] 2025-11-27 16:43:35,520 | INFO     | 
[2025-11-27 17:44:31] 2025-11-27 16:43:35,520 | INFO     | job summary report
[2025-11-27 17:44:31] 2025-11-27 16:43:35,521 | INFO     | --------------------------------------------------
[2025-11-27 17:44:31] 2025-11-27 16:43:35,521 | INFO     | PanDA job id: 6895323641
[2025-11-27 17:44:31] 2025-11-27 16:43:35,521 | INFO     | task id: 47556137
[2025-11-27 17:44:31] 2025-11-27 16:43:35,521 | INFO     | errors: (none)
[2025-11-27 17:44:31] 2025-11-27 16:43:35,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:44:31] 2025-11-27 16:43:35,522 | INFO     | pilot state: finished 
[2025-11-27 17:44:31] 2025-11-27 16:43:35,522 | INFO     | transexitcode: 0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,522 | INFO     | exeerrorcode: 0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,522 | INFO     | exeerrordiag: 
[2025-11-27 17:44:31] 2025-11-27 16:43:35,522 | INFO     | exitcode: 0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,522 | INFO     | exitmsg: OK
[2025-11-27 17:44:31] 2025-11-27 16:43:35,523 | INFO     | cpuconsumptiontime: 83676 s
[2025-11-27 17:44:31] 2025-11-27 16:43:35,523 | INFO     | nevents: 1000
[2025-11-27 17:44:31] 2025-11-27 16:43:35,523 | INFO     | neventsw: 0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,523 | INFO     | pid: 354908
[2025-11-27 17:44:31] 2025-11-27 16:43:35,523 | INFO     | pgrp: 354908
[2025-11-27 17:44:31] 2025-11-27 16:43:35,523 | INFO     | corecount: 2
[2025-11-27 17:44:31] 2025-11-27 16:43:35,523 | INFO     | event service: False
[2025-11-27 17:44:31] 2025-11-27 16:43:35,524 | INFO     | sizes: {0: 2284310, 6: 2284572, 11: 2284600, 42282: 2330032, 42284: 2339032, 42285: 2339088, 42291: 2339462}
[2025-11-27 17:44:31] 2025-11-27 16:43:35,524 | INFO     | --------------------------------------------------
[2025-11-27 17:44:31] 2025-11-27 16:43:35,524 | INFO     | 
[2025-11-27 17:44:31] 2025-11-27 16:43:35,524 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 17:44:31] 2025-11-27 16:43:35,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | job 6895323641 has completed (purged errors)
[2025-11-27 17:44:31] 2025-11-27 16:43:35,536 | INFO     | overall cleanup function is called
[2025-11-27 17:44:31] 2025-11-27 16:43:36,543 | INFO     | --- collectZombieJob: --- 10, [354908]
[2025-11-27 17:44:31] 2025-11-27 16:43:36,544 | INFO     | zombie collector waiting for pid 354908
[2025-11-27 17:44:31] 2025-11-27 16:43:36,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:44:31] 2025-11-27 16:43:36,544 | INFO     | collected zombie processes
[2025-11-27 17:44:31] 2025-11-27 16:43:36,544 | INFO     | will attempt to kill all subprocesses of pid=354908
[2025-11-27 17:44:31] 2025-11-27 16:43:36,583 | INFO     | process IDs to be killed: [354908] (in reverse order)
[2025-11-27 17:44:31] 2025-11-27 16:43:36,605 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:44:31] 2025-11-27 16:43:36,605 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:44:31] 2025-11-27 16:43:36,609 | INFO     | did not find any defunct processes belonging to 354908
[2025-11-27 17:44:31] 2025-11-27 16:43:36,613 | INFO     | did not find any defunct processes belonging to 354908
[2025-11-27 17:44:31] 2025-11-27 16:43:36,615 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:44:31] 2025-11-27 16:43:36,615 | INFO     | ready for new job
[2025-11-27 17:44:31] 2025-11-27 16:43:36,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:44:31] 2025-11-27 16:43:36,619 | INFO     | ***************************************
[2025-11-27 17:44:31] 2025-11-27 16:43:36,619 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:44:31] 2025-11-27 16:43:36,619 | INFO     | ***************************************
[2025-11-27 17:44:31] 2025-11-27 16:43:36,619 | INFO     | 
[2025-11-27 17:44:31] 2025-11-27 16:43:36,620 | INFO     | architecture information:
[2025-11-27 17:44:31] 2025-11-27 16:43:36,621 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:44:31] 2025-11-27 16:43:36,642 | INFO     | cat /etc/os-release:
[2025-11-27 17:44:31] NAME="CentOS Linux"
[2025-11-27 17:44:31] VERSION="7 (Core)"
[2025-11-27 17:44:31] ID="centos"
[2025-11-27 17:44:31] ID_LIKE="rhel fedora"
[2025-11-27 17:44:31] VERSION_ID="7"
[2025-11-27 17:44:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:44:31] ANSI_COLOR="0;31"
[2025-11-27 17:44:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:44:31] HOME_URL="https://www.centos.org/"
[2025-11-27 17:44:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:44:31] 
[2025-11-27 17:44:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:44:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:44:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:44:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:44:31] 
[2025-11-27 17:44:31] 2025-11-27 16:43:36,642 | INFO     | ***************************************
[2025-11-27 17:44:31] 2025-11-27 16:43:37,145 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 17:44:31] 2025-11-27 16:43:37,157 | INFO     | sufficient remaining disk space (219875901440 B)
[2025-11-27 17:44:31] 2025-11-27 16:43:37,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:44:31] 2025-11-27 16:43:37,157 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:44:31] 2025-11-27 16:43:37,157 | INFO     | update_server=False
[2025-11-27 17:44:31] 2025-11-27 16:43:37,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:44:31] 2025-11-27 16:43:37,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:44:31] 2025-11-27 16:43:37,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:44:31] 2025-11-27 16:43:37,158 | INFO     | aborting loop
[2025-11-27 17:44:31] 2025-11-27 16:43:37,379 | INFO     | all data control threads have been joined
[2025-11-27 17:44:31] 2025-11-27 16:43:38,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:44:31] 2025-11-27 16:43:38,089 | INFO     | all job control threads have been joined
[2025-11-27 17:44:31] 2025-11-27 16:43:38,146 | INFO     | all payload control threads have been joined
[2025-11-27 17:44:31] 2025-11-27 16:43:38,163 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:38,164 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:38,165 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:38,385 | INFO     | [data] control thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:38,511 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:38,617 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:38,760 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:39,026 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:39,095 | INFO     | [job] control thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:39,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:44:31] 2025-11-27 16:43:39,115 | INFO     | [job] validate thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:39,152 | INFO     | [payload] control thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:39,390 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:39,479 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:40,027 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:43,103 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:43:47,891 | INFO     | job.realtimelogging is not enabled
[2025-11-27 17:44:31] 2025-11-27 16:43:48,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:44:31] 2025-11-27 16:44:07,830 | INFO     | PID=348446 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 17:44:31] 2025-11-27 16:44:07,830 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:44:31] 2025-11-27 16:44:07,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:44:31] 2025-11-27 16:44:07,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:44:31] 2025-11-27 16:44:25,868 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:44:31] 2025-11-27 16:44:26,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662173177664)>', '<ExcThread(monitor, started 139661464827648)>']
[2025-11-27 17:44:31] 2025-11-27 16:44:26,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:44:31] 2025-11-27 16:44:26,932 | INFO     | [monitor] control thread has ended
[2025-11-27 17:44:31] 2025-11-27 16:44:31,515 | INFO     | all workflow threads have been joined
[2025-11-27 17:44:31] 2025-11-27 16:44:31,515 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:44:31] 2025-11-27 16:44:31,516 | INFO     | traces error code: 0
[2025-11-27 17:44:31] 2025-11-27 16:44:31,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:44:31] 2025-11-27 16:44:31,559 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:44:31] 2025-11-27 16:44:31,562 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:44:31] 2025-11-27 16:44:31,564 [wrapper] pilotpid: 348446
[2025-11-27 17:44:31] 2025-11-27 16:44:31,566 [wrapper] Pilot exit status: 0
[2025-11-27 17:44:31] 2025-11-27 16:44:31,572 [wrapper] pandaids: 6895323641
[2025-11-27 17:44:31] 2025-11-27 16:44:31,586 [wrapper] cleanup supervisor_pilot  428774 348447
[2025-11-27 17:44:31] 2025-11-27 16:44:31,588 [wrapper] Test setup, not cleaning
[2025-11-27 17:44:31] 2025-11-27 16:44:31,590 [wrapper] apfmon messages muted
[2025-11-27 17:44:31] 2025-11-27 16:44:31,592 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:44:31] 2025-11-27 16:44:31,594 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:44:31]  *** Error codes and diagnostics ***
[2025-11-27 17:44:31]     "exeErrorCode": 0,
[2025-11-27 17:44:31]     "exeErrorDiag": "",
[2025-11-27 17:44:31]     "pilotErrorCode": 0,
[2025-11-27 17:44:31]     "pilotErrorDiag": "",
[2025-11-27 17:44:31]  *** Listing of results directory ***
[2025-11-27 17:44:31] total 1301088
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc    576529 Nov 21 13:50 pilot3.tar.gz
[2025-11-27 17:44:31] -rwx------ 1 boinc boinc     36292 Nov 21 14:10 runpilot2-wrapper.sh
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc      5112 Nov 21 14:10 queuedata.json
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc       100 Nov 27 05:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:44:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 05:58 run_atlas
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc       105 Nov 27 05:58 job.xml
[2025-11-27 17:44:31] -rw-r--r-- 2 boinc boinc 410788993 Nov 27 05:58 EVNT.47483658._000002.pool.root.1
[2025-11-27 17:44:31] -rw-r--r-- 2 boinc boinc    590096 Nov 27 05:58 input.tar.gz
[2025-11-27 17:44:31] -rw-r--r-- 2 boinc boinc     15847 Nov 27 05:58 start_atlas.sh
[2025-11-27 17:44:31] drwxrwx--x 2 boinc boinc      4096 Nov 27 05:58 shared
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc         0 Nov 27 05:58 boinc_setup_complete
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc      6281 Nov 27 05:58 init_data.xml
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc         0 Nov 27 05:58 boinc_lockfile
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc      2782 Nov 27 05:58 pandaJob.out
[2025-11-27 17:44:31] -rw------- 1 boinc boinc    991570 Nov 27 05:58 agis_schedconf.cvmfs.json
[2025-11-27 17:44:31] drwx------ 5 boinc boinc      4096 Nov 27 05:58 pilot3
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc       532 Nov 27 17:39 boinc_task_state.xml
[2025-11-27 17:44:31] -rw------- 1 boinc boinc 903364874 Nov 27 17:43 HITS.47556137._000014.pool.root.1
[2025-11-27 17:44:31] -rw------- 1 boinc boinc      1026 Nov 27 17:43 memory_monitor_summary.json
[2025-11-27 17:44:31] -rw------- 1 boinc boinc   1516240 Nov 27 17:43 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:44:31] -rw------- 1 boinc boinc   1193298 Nov 27 17:43 log.47556137._000014.job.log.tgz.1
[2025-11-27 17:44:31] -rw------- 1 boinc boinc      8553 Nov 27 17:43 heartbeat.json
[2025-11-27 17:44:31] -rw------- 1 boinc boinc        95 Nov 27 17:44 pilot_heartbeat.json
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc      8192 Nov 27 17:44 boinc_mmap_file
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc        28 Nov 27 17:44 wrapper_checkpoint.txt
[2025-11-27 17:44:31] -rw------- 1 boinc boinc      4823 Nov 27 17:44 pilotlog.txt
[2025-11-27 17:44:31] -rw------- 1 boinc boinc   5928920 Nov 27 17:44 log.47556137._000014.job.log.1
[2025-11-27 17:44:31] -rw------- 1 boinc boinc       353 Nov 27 17:44 output.list
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc       620 Nov 27 17:44 runtime_log
[2025-11-27 17:44:31] -rw------- 1 boinc boinc   7137280 Nov 27 17:44 result.tar.gz
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc      8898 Nov 27 17:44 runtime_log.err
[2025-11-27 17:44:31] -rw------- 1 boinc boinc       665 Nov 27 17:44 EwwKDm44fg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzRJKDmYmlKCo.diag
[2025-11-27 17:44:31] -rw-r--r-- 1 boinc boinc     21221 Nov 27 17:44 stderr.txt
[2025-11-27 17:44:31] HITS file was successfully produced:
[2025-11-27 17:44:31] -rw------- 1 boinc boinc 903364874 Nov 27 17:43 shared/HITS.pool.root.1
[2025-11-27 17:44:31]  *** Contents of shared directory: ***
[2025-11-27 17:44:31] total 1290932
[2025-11-27 17:44:31] -rw-r--r-- 2 boinc boinc 410788993 Nov 27 05:58 ATLAS.root_0
[2025-11-27 17:44:31] -rw-r--r-- 2 boinc boinc    590096 Nov 27 05:58 input.tar.gz
[2025-11-27 17:44:31] -rw-r--r-- 2 boinc boinc     15847 Nov 27 05:58 start_atlas.sh
[2025-11-27 17:44:31] -rw------- 1 boinc boinc 903364874 Nov 27 17:43 HITS.pool.root.1
[2025-11-27 17:44:31] -rw------- 1 boinc boinc   7137280 Nov 27 17:44 result.tar.gz
17:44:33 (344723): run_atlas exited; CPU time 83816.763703
17:44:33 (344723): called boinc_finish(0)

</stderr_txt>
]]>

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