Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:20:59 (23977): wrapper (7.7.26015): starting
01:20:59 (23977): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 01:20:59] Arguments: --nthreads 8
[2025-11-25 01:20:59] Threads: 8
[2025-11-25 01:20:59] Checking for CVMFS
[2025-11-25 01:21:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:21:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:21:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:21:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:21:01] 2.11.2.0 14280 283040 141184 153264 1 75 13286928 25165824 4632 130560 10 151012148 99.893 79194629 2950 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 01:21:01] CVMFS is ok
[2025-11-25 01:21:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:21:01] Checking for apptainer binary...
[2025-11-25 01:21:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:21:01] Running /usr/bin/apptainer --version
[2025-11-25 01:21:01] apptainer version 1.3.2-1.el7
[2025-11-25 01:21:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:21:18] cg-vwn302.simple-grid.lan
[2025-11-25 01:21:18] apptainer works
[2025-11-25 01:21:18] Set ATHENA_PROC_NUMBER=8
[2025-11-25 01:21:18] Set ATHENA_CORE_NUMBER=8
[2025-11-25 01:21:18] Starting ATLAS job with PandaID=6894295713
[2025-11-25 01:21:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:07:01]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:07:02] 2025-11-26 01:05:50,018 | INFO     | PID=27717 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 02:07:02] 2025-11-26 01:05:50,018 | INFO     | .. there are 9 such processes running
[2025-11-26 02:07:02] 2025-11-26 01:05:50,985 | INFO     | monitor loop #5963: job 0:6894295713 is in state 'finished'
[2025-11-26 02:07:02] 2025-11-26 01:05:50,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:07:02] 2025-11-26 01:05:51,019 | INFO     | time since job start (88833s) is within the limit (172800.0s)
[2025-11-26 02:07:02] 2025-11-26 01:05:53,026 | INFO     | time since job start (88835s) is within the limit (172800.0s)
[2025-11-26 02:07:02] 2025-11-26 01:05:53,500 | INFO     | monitor loop #5964: job 0:6894295713 is in state 'finished'
[2025-11-26 02:07:02] 2025-11-26 01:05:53,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:07:02] 2025-11-26 01:05:55,050 | INFO     | time since job start (88837s) is within the limit (172800.0s)
[2025-11-26 02:07:02] 2025-11-26 01:05:56,009 | INFO     | monitor loop #5965: job 0:6894295713 is in state 'finished'
[2025-11-26 02:07:02] 2025-11-26 01:05:56,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:07:02] 2025-11-26 01:05:57,057 | INFO     | time since job start (88839s) is within the limit (172800.0s)
[2025-11-26 02:07:02] 2025-11-26 01:05:58,515 | INFO     | monitor loop #5966: job 0:6894295713 is in state 'finished'
[2025-11-26 02:07:02] 2025-11-26 01:05:58,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:07:02] 2025-11-26 01:05:59,064 | INFO     | time since job start (88841s) is within the limit (172800.0s)
[2025-11-26 02:07:02] 2025-11-26 01:06:00,260 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 02:07:02] 2025-11-26 01:06:00,261 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-26 02:07:02] 2025-11-26 01:06:00,263 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6894295713/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:07:02] 2025-11-26 01:06:00,263 | INFO     | extracted standard info from prmon json
[2025-11-26 02:07:02] 2025-11-26 01:06:00,264 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:07:02] 2025-11-26 01:06:00,264 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:07:02] 2025-11-26 01:06:00,309 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:07:02] 2025-11-26 01:06:00,311 | INFO     | sum of square deviations: 939474802696.5292
[2025-11-26 02:07:02] 2025-11-26 01:06:00,386 | INFO     | sum of deviations: 5355416930594.89
[2025-11-26 02:07:02] 2025-11-26 01:06:00,386 | INFO     | mean x: 1764074924.2750518
[2025-11-26 02:07:02] 2025-11-26 01:06:00,387 | INFO     | mean y: 2846109.6786454734
[2025-11-26 02:07:02] 2025-11-26 01:06:00,387 | INFO     | intersect: -10053151868.323763
[2025-11-26 02:07:02] 2025-11-26 01:06:00,388 | INFO     | chi2: 21.53763121942267
[2025-11-26 02:07:02] 2025-11-26 01:06:00,391 | INFO     | sum of square deviations: 929770150885.8724
[2025-11-26 02:07:02] 2025-11-26 01:06:00,482 | INFO     | sum of deviations: 5851620790355.418
[2025-11-26 02:07:02] 2025-11-26 01:06:00,482 | INFO     | mean x: 1764074771.779473
[2025-11-26 02:07:02] 2025-11-26 01:06:00,482 | INFO     | mean y: 2853906.825242718
[2025-11-26 02:07:02] 2025-11-26 01:06:00,482 | INFO     | intersect: -11099563825.6121
[2025-11-26 02:07:02] 2025-11-26 01:06:00,484 | INFO     | chi2: 18.312425227412643
[2025-11-26 02:07:02] 2025-11-26 01:06:00,484 | INFO     | current chi2=18.312425227412643 (change=14.974747961612103 %)
[2025-11-26 02:07:02] 2025-11-26 01:06:00,485 | INFO     | right removable region: 1441
[2025-11-26 02:07:02] 2025-11-26 01:06:00,487 | INFO     | sum of square deviations: 929769025435.8724
[2025-11-26 02:07:02] 2025-11-26 01:06:00,587 | INFO     | sum of deviations: 4728821300029.901
[2025-11-26 02:07:02] 2025-11-26 01:06:00,587 | INFO     | mean x: 1764075076.779473
[2025-11-26 02:07:02] 2025-11-26 01:06:00,587 | INFO     | mean y: 2855955.226074896
[2025-11-26 02:07:02] 2025-11-26 01:06:00,588 | INFO     | intersect: -8969260312.054348
[2025-11-26 02:07:02] 2025-11-26 01:06:00,589 | INFO     | chi2: 16.30036036185798
[2025-11-26 02:07:02] 2025-11-26 01:06:00,589 | INFO     | current chi2=16.30036036185798 (change=24.316837837030622 %)
[2025-11-26 02:07:02] 2025-11-26 01:06:00,590 | INFO     | left removable region: 10
[2025-11-26 02:07:02] 2025-11-26 01:06:00,592 | INFO     | sum of square deviations: 908653428562.2256
[2025-11-26 02:07:02] 2025-11-26 01:06:00,672 | INFO     | sum of deviations: 4687247881804.132
[2025-11-26 02:07:02] 2025-11-26 01:06:00,672 | INFO     | mean x: 1764075046.289308
[2025-11-26 02:07:02] 2025-11-26 01:06:00,672 | INFO     | mean y: 2873953.642208246
[2025-11-26 02:07:02] 2025-11-26 01:06:00,673 | INFO     | intersect: -9097027905.691214
[2025-11-26 02:07:02] 2025-11-26 01:06:00,674 | INFO     | chi2: 8.339654880116493
[2025-11-26 02:07:02] 2025-11-26 01:06:00,675 | INFO     | current memory leak: 5.16 B/s (using 1431 data points, chi2=8.34)
[2025-11-26 02:07:02] 2025-11-26 01:06:00,677 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-26 02:07:02] 2025-11-26 01:06:00,677 | INFO     | ..............................
[2025-11-26 02:07:02] 2025-11-26 01:06:00,677 | INFO     | . Timing measurements:
[2025-11-26 02:07:02] 2025-11-26 01:06:00,677 | INFO     | . get job = 0 s
[2025-11-26 02:07:02] 2025-11-26 01:06:00,678 | INFO     | . initial setup = 5 s
[2025-11-26 02:07:02] 2025-11-26 01:06:00,678 | INFO     | . payload setup = 164 s
[2025-11-26 02:07:02] 2025-11-26 01:06:00,678 | INFO     | . stage-in = 0 s
[2025-11-26 02:07:02] 2025-11-26 01:06:00,678 | INFO     | . payload execution = 88383 s
[2025-11-26 02:07:02] 2025-11-26 01:06:00,678 | INFO     | . stage-out = 4 s
[2025-11-26 02:07:02] 2025-11-26 01:06:00,678 | INFO     | . log creation = 1 s
[2025-11-26 02:07:02] 2025-11-26 01:06:00,678 | INFO     | ..............................
[2025-11-26 02:07:02] 2025-11-26 01:06:00,855 | INFO     | 
[2025-11-26 02:07:02] 2025-11-26 01:06:00,855 | INFO     | job summary report
[2025-11-26 02:07:02] 2025-11-26 01:06:00,855 | INFO     | --------------------------------------------------
[2025-11-26 02:07:02] 2025-11-26 01:06:00,855 | INFO     | PanDA job id: 6894295713
[2025-11-26 02:07:02] 2025-11-26 01:06:00,856 | INFO     | task id: 47533967
[2025-11-26 02:07:02] 2025-11-26 01:06:00,856 | INFO     | errors: (none)
[2025-11-26 02:07:02] 2025-11-26 01:06:00,857 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:07:02] 2025-11-26 01:06:00,857 | INFO     | pilot state: finished 
[2025-11-26 02:07:02] 2025-11-26 01:06:00,857 | INFO     | transexitcode: 0
[2025-11-26 02:07:02] 2025-11-26 01:06:00,857 | INFO     | exeerrorcode: 0
[2025-11-26 02:07:02] 2025-11-26 01:06:00,857 | INFO     | exeerrordiag: 
[2025-11-26 02:07:02] 2025-11-26 01:06:00,857 | INFO     | exitcode: 0
[2025-11-26 02:07:02] 2025-11-26 01:06:00,857 | INFO     | exitmsg: OK
[2025-11-26 02:07:02] 2025-11-26 01:06:00,857 | INFO     | cpuconsumptiontime: 330995 s
[2025-11-26 02:07:02] 2025-11-26 01:06:00,857 | INFO     | nevents: 1000
[2025-11-26 02:07:02] 2025-11-26 01:06:00,857 | INFO     | neventsw: 0
[2025-11-26 02:07:02] 2025-11-26 01:06:00,857 | INFO     | pid: 1851
[2025-11-26 02:07:02] 2025-11-26 01:06:00,858 | INFO     | pgrp: 1851
[2025-11-26 02:07:02] 2025-11-26 01:06:00,858 | INFO     | corecount: 8
[2025-11-26 02:07:02] 2025-11-26 01:06:00,858 | INFO     | event service: False
[2025-11-26 02:07:02] 2025-11-26 01:06:00,858 | INFO     | sizes: {0: 2284088, 1: 2284287, 12: 2284287, 23: 2284315, 34: 2284343, 44: 2284371, 55: 2284527, 66: 2284555, 77: 2284583, 87: 2284639, 91: 2284929, 98: 2285237, 8
[2025-11-26 02:07:02] 2025-11-26 01:06:00,858 | INFO     | --------------------------------------------------
[2025-11-26 02:07:02] 2025-11-26 01:06:00,858 | INFO     | 
[2025-11-26 02:07:02] 2025-11-26 01:06:00,858 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-26 02:07:02] 2025-11-26 01:06:01,072 | INFO     | time since job start (88843s) is within the limit (172800.0s)
[2025-11-26 02:07:02] 2025-11-26 01:06:01,310 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,310 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,310 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,311 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,312 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:07:02] 2025-11-26 01:06:01,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,312 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:07:02] 2025-11-26 01:06:01,312 | INFO     | job 6894295713 has completed (purged errors)
[2025-11-26 02:07:02] 2025-11-26 01:06:01,312 | INFO     | overall cleanup function is called
[2025-11-26 02:07:02] 2025-11-26 01:06:02,335 | INFO     | --- collectZombieJob: --- 10, [1851]
[2025-11-26 02:07:02] 2025-11-26 01:06:02,336 | INFO     | zombie collector waiting for pid 1851
[2025-11-26 02:07:02] 2025-11-26 01:06:02,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:07:02] 2025-11-26 01:06:02,336 | INFO     | collected zombie processes
[2025-11-26 02:07:02] 2025-11-26 01:06:02,336 | INFO     | will attempt to kill all subprocesses of pid=1851
[2025-11-26 02:07:02] 2025-11-26 01:06:02,447 | INFO     | process IDs to be killed: [1851] (in reverse order)
[2025-11-26 02:07:02] 2025-11-26 01:06:02,593 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:07:02] 2025-11-26 01:06:02,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:07:02] 2025-11-26 01:06:02,597 | INFO     | did not find any defunct processes belonging to 1851
[2025-11-26 02:07:02] 2025-11-26 01:06:02,600 | INFO     | did not find any defunct processes belonging to 1851
[2025-11-26 02:07:02] 2025-11-26 01:06:02,638 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:07:02] 2025-11-26 01:06:02,638 | INFO     | ready for new job
[2025-11-26 02:07:02] 2025-11-26 01:06:02,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:07:02] 2025-11-26 01:06:02,644 | INFO     | ***************************************
[2025-11-26 02:07:02] 2025-11-26 01:06:02,644 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:07:02] 2025-11-26 01:06:02,645 | INFO     | ***************************************
[2025-11-26 02:07:02] 2025-11-26 01:06:02,645 | INFO     | 
[2025-11-26 02:07:02] 2025-11-26 01:06:02,645 | INFO     | pilot is running in a VM
[2025-11-26 02:07:02] 2025-11-26 01:06:02,645 | INFO     | architecture information:
[2025-11-26 02:07:02] 2025-11-26 01:06:02,648 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:07:02] 2025-11-26 01:06:02,853 | INFO     | cat /etc/os-release:
[2025-11-26 02:07:02] NAME="CentOS Linux"
[2025-11-26 02:07:02] VERSION="7 (Core)"
[2025-11-26 02:07:02] ID="centos"
[2025-11-26 02:07:02] ID_LIKE="rhel fedora"
[2025-11-26 02:07:02] VERSION_ID="7"
[2025-11-26 02:07:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:07:02] ANSI_COLOR="0;31"
[2025-11-26 02:07:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:07:02] HOME_URL="https://www.centos.org/"
[2025-11-26 02:07:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:07:02] 
[2025-11-26 02:07:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:07:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:07:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:07:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:07:02] 
[2025-11-26 02:07:02] 2025-11-26 01:06:02,853 | INFO     | ***************************************
[2025-11-26 02:07:02] 2025-11-26 01:06:03,357 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-26 02:07:02] 2025-11-26 01:06:03,653 | INFO     | sufficient remaining disk space (495468937216 B)
[2025-11-26 02:07:02] 2025-11-26 01:06:03,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:07:02] 2025-11-26 01:06:03,654 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:07:02] 2025-11-26 01:06:03,654 | INFO     | update_server=False
[2025-11-26 02:07:02] 2025-11-26 01:06:03,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:07:02] 2025-11-26 01:06:03,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:07:02] 2025-11-26 01:06:03,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:07:02] 2025-11-26 01:06:04,195 | INFO     | all data control threads have been joined
[2025-11-26 02:07:02] 2025-11-26 01:06:04,546 | INFO     | all payload control threads have been joined
[2025-11-26 02:07:02] 2025-11-26 01:06:04,549 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:07:02] 2025-11-26 01:06:04,550 | INFO     | aborting loop
[2025-11-26 02:07:02] 2025-11-26 01:06:04,647 | INFO     | all job control threads have been joined
[2025-11-26 02:07:02] 2025-11-26 01:06:04,665 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:04,673 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:04,725 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:04,785 | INFO     | [job] validate thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:05,036 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:05,055 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:05,204 | INFO     | [data] control thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:05,449 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:05,552 | INFO     | [payload] control thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:05,554 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:05,653 | INFO     | [job] control thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:05,665 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:05,869 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:07:02] 2025-11-26 01:06:05,956 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:06,093 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:06,875 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:07,894 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:07:02] 2025-11-26 01:06:34,252 | INFO     | PID=27717 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 02:07:02] 2025-11-26 01:06:34,252 | INFO     | .. there are 9 such processes running
[2025-11-26 02:07:02] 2025-11-26 01:06:34,253 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:07:02] 2025-11-26 01:06:34,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:07:02] 2025-11-26 01:06:34,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:07:02] 2025-11-26 01:06:52,773 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:07:02] 2025-11-26 01:06:53,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998468261696)>', '<ExcThread(monitor, started 139997789275904)>']
[2025-11-26 02:07:02] 2025-11-26 01:06:54,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:07:02] 2025-11-26 01:06:54,371 | INFO     | [monitor] control thread has ended
[2025-11-26 02:07:02] 2025-11-26 01:06:58,826 | INFO     | all workflow threads have been joined
[2025-11-26 02:07:02] 2025-11-26 01:06:58,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:07:02] 2025-11-26 01:06:58,827 | INFO     | traces error code: 0
[2025-11-26 02:07:02] 2025-11-26 01:06:58,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:07:02] 2025-11-26 01:06:59,032 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:07:02] 2025-11-26 01:06:59,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:07:02] 2025-11-26 01:06:59,059 [wrapper] pilotpid: 27717
[2025-11-26 02:07:02] 2025-11-26 01:06:59,067 [wrapper] Pilot exit status: 0
[2025-11-26 02:07:02] 2025-11-26 01:06:59,096 [wrapper] pandaids: 6894295713
[2025-11-26 02:07:02] 2025-11-26 01:06:59,181 [wrapper] cleanup supervisor_pilot 25693 27718
[2025-11-26 02:07:02] 2025-11-26 01:06:59,261 [wrapper] Test setup, not cleaning
[2025-11-26 02:07:02] 2025-11-26 01:06:59,392 [wrapper] apfmon messages muted
[2025-11-26 02:07:02] 2025-11-26 01:06:59,494 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:07:02] 2025-11-26 01:06:59,599 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:07:02]  *** Error codes and diagnostics ***
[2025-11-26 02:07:02]     "exeErrorCode": 0,
[2025-11-26 02:07:02]     "exeErrorDiag": "",
[2025-11-26 02:07:02]     "pilotErrorCode": 0,
[2025-11-26 02:07:02]     "pilotErrorDiag": "",
[2025-11-26 02:07:02]  *** Listing of results directory ***
[2025-11-26 02:07:02] total 1319184
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc    576529 Nov 21 13:50 pilot3.tar.gz
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc      5112 Nov 21 14:01 queuedata.json
[2025-11-26 02:07:02] -rwx------. 1 boinc boinc     36292 Nov 21 14:02 runpilot2-wrapper.sh
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc       100 Nov 25 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:07:02] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 01:20 run_atlas
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc       105 Nov 25 01:20 job.xml
[2025-11-26 02:07:02] -rw-r--r--. 2 boinc boinc 410181633 Nov 25 01:20 EVNT.47493127._002466.pool.root.1
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc      6391 Nov 25 01:20 init_data.xml
[2025-11-26 02:07:02] -rw-r--r--. 2 boinc boinc     15847 Nov 25 01:20 start_atlas.sh
[2025-11-26 02:07:02] drwxrwx--x. 2 boinc boinc        68 Nov 25 01:20 shared
[2025-11-26 02:07:02] -rw-r--r--. 2 boinc boinc    590107 Nov 25 01:20 input.tar.gz
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc         0 Nov 25 01:20 boinc_lockfile
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc      2785 Nov 25 01:21 pandaJob.out
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc    991801 Nov 25 01:25 agis_schedconf.cvmfs.json
[2025-11-26 02:07:02] drwx------. 5 boinc boinc      4096 Nov 25 01:25 pilot3
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc       533 Nov 26 01:50 boinc_task_state.xml
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc 908008861 Nov 26 02:03 HITS.47533967._004375.pool.root.1
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc      1031 Nov 26 02:04 memory_monitor_summary.json
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc   1516240 Nov 26 02:04 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc   2534549 Nov 26 02:04 log.47533967._004375.job.log.tgz.1
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc      8627 Nov 26 02:06 heartbeat.json
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc        95 Nov 26 02:06 pilot_heartbeat.json
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc      8192 Nov 26 02:06 boinc_mmap_file
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc        29 Nov 26 02:06 wrapper_checkpoint.txt
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc      4884 Nov 26 02:06 pilotlog.txt
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc  11838522 Nov 26 02:06 log.47533967._004375.job.log.1
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc       353 Nov 26 02:07 output.list
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc       620 Nov 26 02:07 runtime_log
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc  14397440 Nov 26 02:07 result.tar.gz
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc      8817 Nov 26 02:07 runtime_log.err
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc       662 Nov 26 02:07 lBlKDmlxfg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmncHKDm2XVFXo.diag
[2025-11-26 02:07:02] -rw-r--r--. 1 boinc boinc     21498 Nov 26 02:07 stderr.txt
[2025-11-26 02:07:02] HITS file was successfully produced:
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc 908008861 Nov 26 02:03 shared/HITS.pool.root.1
[2025-11-26 02:07:02]  *** Contents of shared directory: ***
[2025-11-26 02:07:02] total 1301956
[2025-11-26 02:07:02] -rw-r--r--. 2 boinc boinc 410181633 Nov 25 01:20 ATLAS.root_0
[2025-11-26 02:07:02] -rw-r--r--. 2 boinc boinc     15847 Nov 25 01:20 start_atlas.sh
[2025-11-26 02:07:02] -rw-r--r--. 2 boinc boinc    590107 Nov 25 01:20 input.tar.gz
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc 908008861 Nov 26 02:03 HITS.pool.root.1
[2025-11-26 02:07:02] -rw-------. 1 boinc boinc  14397440 Nov 26 02:07 result.tar.gz
02:07:03 (23977): run_atlas exited; CPU time 331495.552666
02:07:03 (23977): called boinc_finish(0)

</stderr_txt>
]]>

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