Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
09:19:34 (313969): wrapper (7.7.26015): starting
09:19:34 (313969): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 09:19:34] Arguments: --nthreads 12
[2025-11-22 09:19:34] Threads: 12
[2025-11-22 09:19:34] Checking for CVMFS
[2025-11-22 09:19:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 09:19:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 09:19:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 09:19:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 09:19:34] 2.13.2.0 296573 0 32516 153166 3 36 3061195 4096000 212 130560 0 44657 99.891 28890 2923 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-11-22 09:19:34] CVMFS is ok
[2025-11-22 09:19:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 09:19:34] Checking for apptainer binary...
[2025-11-22 09:19:34] apptainer is not installed, using version from CVMFS
[2025-11-22 09:19:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 09:19:34] dualxeon1
[2025-11-22 09:19:34] apptainer works
[2025-11-22 09:19:34] Set ATHENA_PROC_NUMBER=12
[2025-11-22 09:19:34] Set ATHENA_CORE_NUMBER=12
[2025-11-22 09:19:34] Starting ATLAS job with PandaID=6894267745
[2025-11-22 09:19:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:13:29]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:13:29] 2025-11-22 23:12:54,461 | INFO     | monitor loop #3594: job 0:6894267745 is in state 'finished'
[2025-11-22 23:13:29] 2025-11-22 23:12:54,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:13:29] 2025-11-22 23:12:54,689 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 23:13:29] 2025-11-22 23:12:54,700 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2594.05659375
[2025-11-22 23:13:29] 2025-11-22 23:12:54,714 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/5/PanDA_Pilot-6894267745/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 23:13:29] 2025-11-22 23:12:54,715 | INFO     | extracted standard info from prmon json
[2025-11-22 23:13:29] 2025-11-22 23:12:54,717 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 23:13:29] 2025-11-22 23:12:54,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 23:13:29] 2025-11-22 23:12:54,741 | INFO     | fitting pss+swap vs Time
[2025-11-22 23:13:29] 2025-11-22 23:12:54,743 | INFO     | sum of square deviations: 170346377476.49347
[2025-11-22 23:13:29] 2025-11-22 23:12:54,782 | INFO     | sum of deviations: 2429809652814.512
[2025-11-22 23:13:29] 2025-11-22 23:12:54,783 | INFO     | mean x: 1763828155.4822955
[2025-11-22 23:13:29] 2025-11-22 23:12:54,783 | INFO     | mean y: 3395603.8974358975
[2025-11-22 23:13:29] 2025-11-22 23:12:54,783 | INFO     | intersect: -25155734526.05383
[2025-11-22 23:13:29] 2025-11-22 23:12:54,784 | INFO     | chi2: 12.45544259368817
[2025-11-22 23:13:29] 2025-11-22 23:12:54,790 | INFO     | sum of square deviations: 167246130067.99512
[2025-11-22 23:13:29] 2025-11-22 23:12:54,823 | INFO     | sum of deviations: 2728574955110.518
[2025-11-22 23:13:29] 2025-11-22 23:12:54,827 | INFO     | mean x: 1763828002.997543
[2025-11-22 23:13:29] 2025-11-22 23:12:54,827 | INFO     | mean y: 3410293.257985258
[2025-11-22 23:13:29] 2025-11-22 23:12:54,827 | INFO     | intersect: -28772962063.72895
[2025-11-22 23:13:29] 2025-11-22 23:12:54,828 | INFO     | chi2: 9.710852875830087
[2025-11-22 23:13:29] 2025-11-22 23:12:54,829 | INFO     | current chi2=9.710852875830087 (change=22.035264481479864 %)
[2025-11-22 23:13:29] 2025-11-22 23:12:54,829 | INFO     | right removable region: 813
[2025-11-22 23:13:29] 2025-11-22 23:12:54,830 | INFO     | sum of square deviations: 167244889937.99512
[2025-11-22 23:13:29] 2025-11-22 23:12:54,867 | INFO     | sum of deviations: 2032035700529.9734
[2025-11-22 23:13:29] 2025-11-22 23:12:54,867 | INFO     | mean x: 1763828307.997543
[2025-11-22 23:13:29] 2025-11-22 23:12:54,867 | INFO     | mean y: 3415160.988943489
[2025-11-22 23:13:29] 2025-11-22 23:12:54,867 | INFO     | intersect: -21427207280.06255
[2025-11-22 23:13:29] 2025-11-22 23:12:54,869 | INFO     | chi2: 7.9468528951370825
[2025-11-22 23:13:29] 2025-11-22 23:12:54,869 | INFO     | current chi2=7.9468528951370825 (change=36.1977478089444 %)
[2025-11-22 23:13:29] 2025-11-22 23:12:54,874 | INFO     | sum of square deviations: 164181263574.11392
[2025-11-22 23:13:29] 2025-11-22 23:12:54,905 | INFO     | sum of deviations: 1682414052331.555
[2025-11-22 23:13:29] 2025-11-22 23:12:54,906 | INFO     | mean x: 1763828460.512979
[2025-11-22 23:13:29] 2025-11-22 23:12:54,906 | INFO     | mean y: 3432563.6613102597
[2025-11-22 23:13:29] 2025-11-22 23:12:54,906 | INFO     | intersect: -18071040267.581085
[2025-11-22 23:13:29] 2025-11-22 23:12:54,911 | INFO     | chi2: 4.640535098112337
[2025-11-22 23:13:29] 2025-11-22 23:12:54,911 | INFO     | current chi2=4.640535098112337 (change=41.60537310370978 %)
[2025-11-22 23:13:29] 2025-11-22 23:12:54,912 | INFO     | sum of square deviations: 161155561202.64032
[2025-11-22 23:13:29] 2025-11-22 23:12:54,948 | INFO     | sum of deviations: 1505315924345.4285
[2025-11-22 23:13:29] 2025-11-22 23:12:54,948 | INFO     | mean x: 1763828613.0211444
[2025-11-22 23:13:29] 2025-11-22 23:12:54,948 | INFO     | mean y: 3441475.856965174
[2025-11-22 23:13:29] 2025-11-22 23:12:54,948 | INFO     | intersect: -16472063801.048975
[2025-11-22 23:13:29] 2025-11-22 23:12:54,953 | INFO     | chi2: 3.7143434589417508
[2025-11-22 23:13:29] 2025-11-22 23:12:54,954 | INFO     | current chi2=3.7143434589417508 (change=19.958725008832268 %)
[2025-11-22 23:13:29] 2025-11-22 23:12:54,954 | INFO     | left removable region: 30
[2025-11-22 23:13:29] 2025-11-22 23:12:54,955 | INFO     | sum of square deviations: 148855465650.6386
[2025-11-22 23:13:29] 2025-11-22 23:12:54,987 | INFO     | sum of deviations: 1608432371836.0278
[2025-11-22 23:13:29] 2025-11-22 23:12:54,987 | INFO     | mean x: 1763828887.5376756
[2025-11-22 23:13:29] 2025-11-22 23:12:54,987 | INFO     | mean y: 3469983.422733078
[2025-11-22 23:13:29] 2025-11-22 23:12:54,988 | INFO     | intersect: -19055282536.646084
[2025-11-22 23:13:29] 2025-11-22 23:12:54,989 | INFO     | chi2: 0.542570603252056
[2025-11-22 23:13:29] 2025-11-22 23:12:54,989 | INFO     | current memory leak: 10.81 B/s (using 783 data points, chi2=0.54)
[2025-11-22 23:13:29] 2025-11-22 23:12:54,990 | INFO     | could have reported an average CPU frequency of 2553 MHz (31 samples)
[2025-11-22 23:13:29] 2025-11-22 23:12:54,990 | INFO     | ..............................
[2025-11-22 23:13:29] 2025-11-22 23:12:54,990 | INFO     | . Timing measurements:
[2025-11-22 23:13:29] 2025-11-22 23:12:54,990 | INFO     | . get job = 0 s
[2025-11-22 23:13:29] 2025-11-22 23:12:54,990 | INFO     | . initial setup = 2 s
[2025-11-22 23:13:29] 2025-11-22 23:12:54,991 | INFO     | . payload setup = 4 s
[2025-11-22 23:13:29] 2025-11-22 23:12:54,991 | INFO     | . stage-in = 0 s
[2025-11-22 23:13:29] 2025-11-22 23:12:54,991 | INFO     | . payload execution = 49952 s
[2025-11-22 23:13:29] 2025-11-22 23:12:54,991 | INFO     | . stage-out = 3 s
[2025-11-22 23:13:29] 2025-11-22 23:12:54,991 | INFO     | . log creation = 1 s
[2025-11-22 23:13:29] 2025-11-22 23:12:54,991 | INFO     | ..............................
[2025-11-22 23:13:29] 2025-11-22 23:12:55,074 | INFO     | time since job start (49993s) is within the limit (172800.0s)
[2025-11-22 23:13:29] 2025-11-22 23:12:55,111 | INFO     | 
[2025-11-22 23:13:29] 2025-11-22 23:12:55,111 | INFO     | job summary report
[2025-11-22 23:13:29] 2025-11-22 23:12:55,111 | INFO     | --------------------------------------------------
[2025-11-22 23:13:29] 2025-11-22 23:12:55,111 | INFO     | PanDA job id: 6894267745
[2025-11-22 23:13:29] 2025-11-22 23:12:55,111 | INFO     | task id: 47533967
[2025-11-22 23:13:29] 2025-11-22 23:12:55,112 | INFO     | errors: (none)
[2025-11-22 23:13:29] 2025-11-22 23:12:55,112 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:13:29] 2025-11-22 23:12:55,112 | INFO     | pilot state: finished 
[2025-11-22 23:13:29] 2025-11-22 23:12:55,112 | INFO     | transexitcode: 0
[2025-11-22 23:13:29] 2025-11-22 23:12:55,112 | INFO     | exeerrorcode: 0
[2025-11-22 23:13:29] 2025-11-22 23:12:55,112 | INFO     | exeerrordiag: 
[2025-11-22 23:13:29] 2025-11-22 23:12:55,112 | INFO     | exitcode: 0
[2025-11-22 23:13:29] 2025-11-22 23:12:55,112 | INFO     | exitmsg: OK
[2025-11-22 23:13:29] 2025-11-22 23:12:55,112 | INFO     | cpuconsumptiontime: 340036 s
[2025-11-22 23:13:29] 2025-11-22 23:12:55,112 | INFO     | nevents: 1000
[2025-11-22 23:13:29] 2025-11-22 23:12:55,112 | INFO     | neventsw: 0
[2025-11-22 23:13:29] 2025-11-22 23:12:55,113 | INFO     | pid: 358669
[2025-11-22 23:13:29] 2025-11-22 23:12:55,113 | INFO     | pgrp: 358669
[2025-11-22 23:13:29] 2025-11-22 23:12:55,113 | INFO     | corecount: 12
[2025-11-22 23:13:29] 2025-11-22 23:12:55,113 | INFO     | event service: False
[2025-11-22 23:13:29] 2025-11-22 23:12:55,113 | INFO     | sizes: {0: 2298659, 1: 2298858, 4: 2299120, 11: 2299148, 49960: 2346985, 49964: 2356025, 49967: 2356209, 49978: 2356455}
[2025-11-22 23:13:29] 2025-11-22 23:12:55,113 | INFO     | --------------------------------------------------
[2025-11-22 23:13:29] 2025-11-22 23:12:55,113 | INFO     | 
[2025-11-22 23:13:29] 2025-11-22 23:12:55,113 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/5
[2025-11-22 23:13:29] 2025-11-22 23:12:55,145 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,145 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,146 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,146 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,146 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,146 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,146 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,146 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,147 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,147 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,147 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,147 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,147 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:13:29] 2025-11-22 23:12:55,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,148 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:13:29] 2025-11-22 23:12:55,150 | INFO     | job 6894267745 has completed (purged errors)
[2025-11-22 23:13:29] 2025-11-22 23:12:55,150 | INFO     | overall cleanup function is called
[2025-11-22 23:13:29] 2025-11-22 23:12:56,189 | INFO     | --- collectZombieJob: --- 10, [358669]
[2025-11-22 23:13:29] 2025-11-22 23:12:56,189 | INFO     | zombie collector waiting for pid 358669
[2025-11-22 23:13:29] 2025-11-22 23:12:56,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:13:29] 2025-11-22 23:12:56,189 | INFO     | collected zombie processes
[2025-11-22 23:13:29] 2025-11-22 23:12:56,189 | INFO     | will attempt to kill all subprocesses of pid=358669
[2025-11-22 23:13:29] 2025-11-22 23:12:56,551 | INFO     | process IDs to be killed: [358669] (in reverse order)
[2025-11-22 23:13:29] 2025-11-22 23:12:56,692 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:13:29] 2025-11-22 23:12:56,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:13:29] 2025-11-22 23:12:56,702 | INFO     | did not find any defunct processes belonging to 358669
[2025-11-22 23:13:29] 2025-11-22 23:12:56,716 | INFO     | did not find any defunct processes belonging to 358669
[2025-11-22 23:13:29] 2025-11-22 23:12:56,718 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:13:29] 2025-11-22 23:12:56,718 | INFO     | ready for new job
[2025-11-22 23:13:29] 2025-11-22 23:12:56,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:13:29] 2025-11-22 23:12:56,722 | INFO     | ***************************************
[2025-11-22 23:13:29] 2025-11-22 23:12:56,722 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:13:29] 2025-11-22 23:12:56,722 | INFO     | ***************************************
[2025-11-22 23:13:29] 2025-11-22 23:12:56,722 | INFO     | 
[2025-11-22 23:13:29] 2025-11-22 23:12:56,724 | INFO     | architecture information:
[2025-11-22 23:13:29] 2025-11-22 23:12:56,725 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:13:29] 2025-11-22 23:12:56,750 | INFO     | cat /etc/os-release:
[2025-11-22 23:13:29] NAME="CentOS Linux"
[2025-11-22 23:13:29] VERSION="7 (Core)"
[2025-11-22 23:13:29] ID="centos"
[2025-11-22 23:13:29] ID_LIKE="rhel fedora"
[2025-11-22 23:13:29] VERSION_ID="7"
[2025-11-22 23:13:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:13:29] ANSI_COLOR="0;31"
[2025-11-22 23:13:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:13:29] HOME_URL="https://www.centos.org/"
[2025-11-22 23:13:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:13:29] 
[2025-11-22 23:13:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:13:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:13:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:13:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:13:29] 
[2025-11-22 23:13:29] 2025-11-22 23:12:56,751 | INFO     | ***************************************
[2025-11-22 23:13:29] 2025-11-22 23:12:57,253 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/5
[2025-11-22 23:13:29] 2025-11-22 23:12:57,277 | INFO     | sufficient remaining disk space (424567373824 B)
[2025-11-22 23:13:29] 2025-11-22 23:12:57,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:13:29] 2025-11-22 23:12:57,278 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:13:29] 2025-11-22 23:12:57,278 | INFO     | update_server=False
[2025-11-22 23:13:29] 2025-11-22 23:12:57,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:13:29] 2025-11-22 23:12:57,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:13:29] 2025-11-22 23:12:57,284 | INFO     | all payload control threads have been joined
[2025-11-22 23:13:29] 2025-11-22 23:12:57,447 | INFO     | all data control threads have been joined
[2025-11-22 23:13:29] 2025-11-22 23:12:57,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:13:29] 2025-11-22 23:12:57,975 | INFO     | aborting loop
[2025-11-22 23:13:29] 2025-11-22 23:12:58,286 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:58,289 | INFO     | [payload] control thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:58,452 | INFO     | [data] control thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:58,627 | INFO     | all job control threads have been joined
[2025-11-22 23:13:29] 2025-11-22 23:12:58,729 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:58,750 | INFO     | [job] validate thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:58,922 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:58,980 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:58,998 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:59,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:13:29] 2025-11-22 23:12:59,150 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:59,191 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:59,283 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:59,295 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:59,453 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:12:59,635 | INFO     | [job] control thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:13:00,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:13:29] 2025-11-22 23:13:01,130 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:13:03,089 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:13:29] 2025-11-22 23:13:05,553 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:13:29] 2025-11-22 23:13:06,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137318163519296)>', '<ExcThread(monitor, started 137317528356608)>']
[2025-11-22 23:13:29] 2025-11-22 23:13:11,716 | INFO     | all workflow threads have been joined
[2025-11-22 23:13:29] 2025-11-22 23:13:11,716 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:13:29] 2025-11-22 23:13:11,716 | INFO     | traces error code: 0
[2025-11-22 23:13:29] 2025-11-22 23:13:11,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:13:29] 2025-11-22 23:13:28,697 | INFO     | PID=321857 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 23:13:29] 2025-11-22 23:13:28,698 | INFO     | .. there are 4 such processes running
[2025-11-22 23:13:29] 2025-11-22 23:13:28,699 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:13:29] 2025-11-22 23:13:28,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:13:29] 2025-11-22 23:13:28,699 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:13:29] 2025-11-22 23:13:28,699 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:13:29] 2025-11-22 23:13:28,699 | INFO     | [monitor] control thread has ended
[2025-11-22 23:13:29] 2025-11-22 23:13:28,834 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:13:29] 2025-11-22 23:13:28,836 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:13:29] 2025-11-22 23:13:28,839 [wrapper] pilotpid: 321857
[2025-11-22 23:13:29] 2025-11-22 23:13:28,842 [wrapper] Pilot exit status: 0
[2025-11-22 23:13:29] 2025-11-22 23:13:28,855 [wrapper] pandaids: 6894267745
[2025-11-22 23:13:29] 2025-11-22 23:13:28,895 [wrapper] cleanup supervisor_pilot  639134 321858
[2025-11-22 23:13:29] 2025-11-22 23:13:28,898 [wrapper] Test setup, not cleaning
[2025-11-22 23:13:29] 2025-11-22 23:13:28,901 [wrapper] apfmon messages muted
[2025-11-22 23:13:29] 2025-11-22 23:13:28,903 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:13:29] 2025-11-22 23:13:28,909 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:13:29]  *** Error codes and diagnostics ***
[2025-11-22 23:13:29]     "exeErrorCode": 0,
[2025-11-22 23:13:29]     "exeErrorDiag": "",
[2025-11-22 23:13:29]     "pilotErrorCode": 0,
[2025-11-22 23:13:29]     "pilotErrorDiag": "",
[2025-11-22 23:13:29]  *** Listing of results directory ***
[2025-11-22 23:13:29] total 1330324
[2025-11-22 23:13:29] -rw-r--r-- 1 boinc boinc    576529 Nov 21 05:09 pilot3.tar.gz
[2025-11-22 23:13:29] -rwx------ 1 boinc boinc     36292 Nov 21 05:29 runpilot2-wrapper.sh
[2025-11-22 23:13:29] -rw-r--r-- 1 boinc boinc      5112 Nov 21 05:29 queuedata.json
[2025-11-22 23:13:29] -rw-rw-r-- 1 boinc boinc       100 Nov 22 09:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:13:29] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 09:19 run_atlas
[2025-11-22 23:13:29] -rw-rw-r-- 1 boinc boinc       105 Nov 22 09:19 job.xml
[2025-11-22 23:13:29] -rw-r--r-- 2 boinc boinc 408220765 Nov 22 09:19 EVNT.47493127._002251.pool.root.1
[2025-11-22 23:13:29] -rw-r--r-- 2 boinc boinc     15847 Nov 22 09:19 start_atlas.sh
[2025-11-22 23:13:29] drwxrwx--x 2 boinc boinc      4096 Nov 22 09:19 shared
[2025-11-22 23:13:29] -rw-r--r-- 2 boinc boinc    590102 Nov 22 09:19 input.tar.gz
[2025-11-22 23:13:29] -rw-rw-r-- 1 boinc boinc      9399 Nov 22 09:19 init_data.xml
[2025-11-22 23:13:29] -rw-rw-r-- 1 boinc boinc         0 Nov 22 09:19 boinc_lockfile
[2025-11-22 23:13:29] -rw-rw-r-- 1 boinc boinc      2786 Nov 22 09:19 pandaJob.out
[2025-11-22 23:13:29] -rw------- 1 boinc boinc    989768 Nov 22 09:19 agis_schedconf.cvmfs.json
[2025-11-22 23:13:29] drwx------ 5 boinc boinc      4096 Nov 22 09:19 pilot3
[2025-11-22 23:13:29] -rw-rw-r-- 1 boinc boinc       533 Nov 22 23:00 boinc_task_state.xml
[2025-11-22 23:13:29] -rw------- 1 boinc boinc 930772984 Nov 22 23:11 HITS.47533967._002224.pool.root.1
[2025-11-22 23:13:29] -rw------- 1 boinc boinc      1057 Nov 22 23:12 memory_monitor_summary.json
[2025-11-22 23:13:29] -rw------- 1 boinc boinc   1526164 Nov 22 23:12 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:13:29] -rw------- 1 boinc boinc   2503616 Nov 22 23:12 log.47533967._002224.job.log.tgz.1
[2025-11-22 23:13:29] -rw------- 1 boinc boinc      8598 Nov 22 23:12 heartbeat.json
[2025-11-22 23:13:29] -rw-rw-r-- 1 boinc boinc        29 Nov 22 23:13 wrapper_checkpoint.txt
[2025-11-22 23:13:29] -rw-rw-r-- 1 boinc boinc      8192 Nov 22 23:13 boinc_mmap_file
[2025-11-22 23:13:29] -rw------- 1 boinc boinc        95 Nov 22 23:13 pilot_heartbeat.json
[2025-11-22 23:13:29] -rw------- 1 boinc boinc       821 Nov 22 23:13 pilotlog.txt
[2025-11-22 23:13:29] -rw------- 1 boinc boinc   7167435 Nov 22 23:13 log.47533967._002224.job.log.1
[2025-11-22 23:13:29] -rw------- 1 boinc boinc       353 Nov 22 23:13 output.list
[2025-11-22 23:13:29] -rw-rw-r-- 1 boinc boinc       620 Nov 22 23:13 runtime_log
[2025-11-22 23:13:29] -rw------- 1 boinc boinc   9687040 Nov 22 23:13 result.tar.gz
[2025-11-22 23:13:29] -rw------- 1 boinc boinc       661 Nov 22 23:13 Z0PKDmctYg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGNHKDmlKsRgn.diag
[2025-11-22 23:13:29] -rw-rw-r-- 1 boinc boinc      9173 Nov 22 23:13 runtime_log.err
[2025-11-22 23:13:29] -rw-rw-r-- 1 boinc boinc     21109 Nov 22 23:13 stderr.txt
[2025-11-22 23:13:29] HITS file was successfully produced:
[2025-11-22 23:13:29] -rw------- 1 boinc boinc 930772984 Nov 22 23:11 shared/HITS.pool.root.1
[2025-11-22 23:13:29]  *** Contents of shared directory: ***
[2025-11-22 23:13:29] total 1317676
[2025-11-22 23:13:29] -rw-r--r-- 2 boinc boinc 408220765 Nov 22 09:19 ATLAS.root_0
[2025-11-22 23:13:29] -rw-r--r-- 2 boinc boinc     15847 Nov 22 09:19 start_atlas.sh
[2025-11-22 23:13:29] -rw-r--r-- 2 boinc boinc    590102 Nov 22 09:19 input.tar.gz
[2025-11-22 23:13:29] -rw------- 1 boinc boinc 930772984 Nov 22 23:11 HITS.pool.root.1
[2025-11-22 23:13:29] -rw------- 1 boinc boinc   9687040 Nov 22 23:13 result.tar.gz
23:13:30 (313969): run_atlas exited; CPU time 340327.747697
23:13:30 (313969): called boinc_finish(0)

</stderr_txt>
]]>

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