Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:01:37 (1246630): wrapper (7.7.26015): starting
00:01:37 (1246630): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 00:01:37] Arguments: --nthreads 3
[2025-11-25 00:01:37] Threads: 3
[2025-11-25 00:01:37] Checking for CVMFS
[2025-11-25 00:01:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:01:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:01:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:01:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:01:37] 2.9.2.0 46827 9035 90500 153261 3 81 34055476 36864000 0 130560 0 3355751 99.921 484323 7091 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 00:01:37] CVMFS is ok
[2025-11-25 00:01:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:01:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:01:37] Further information can be found at the LHC@home message board.
[2025-11-25 00:01:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:01:37] Checking for apptainer binary...
[2025-11-25 00:01:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:01:37] Running /usr/bin/apptainer --version
[2025-11-25 00:01:37] apptainer version 1.4.1-1.1
[2025-11-25 00:01:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:01:37] magicA252
[2025-11-25 00:01:37] apptainer works
[2025-11-25 00:01:37] Set ATHENA_PROC_NUMBER=3
[2025-11-25 00:01:37] Set ATHENA_CORE_NUMBER=3
[2025-11-25 00:01:37] Starting ATLAS job with PandaID=6894292781
[2025-11-25 00:01:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 08:01:21]  *** The last 200 lines of the pilot log: ***
[2025-11-25 08:01:21] 2025-11-25 07:00:37,944 | INFO     | [job] control thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:37,971 | INFO     | [payload] control thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:38,043 | INFO     | [payload] validate_post thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:38,267 | INFO     | [job] job monitor thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:38,710 | INFO     | [data] control thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:38,787 | INFO     | [payload] failed_post thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:38,816 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:39,065 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:39,072 | INFO     | [data] copytool_in thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:39,087 | INFO     | [job] validate thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:39,108 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:39,655 | INFO     | [data] copytool_out thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:40,801 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:00:47,390 | INFO     | job.realtimelogging is not enabled
[2025-11-25 08:01:21] 2025-11-25 07:00:48,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 08:01:21] 2025-11-25 07:01:07,526 | INFO     | PID=1250366 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 08:01:21] 2025-11-25 07:01:07,527 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 08:01:21] 2025-11-25 07:01:07,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 08:01:21] 2025-11-25 07:01:07,527 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 08:01:21] 2025-11-25 07:01:16,016 | INFO     | [monitor] cgroup control has ended
[2025-11-25 08:01:21] 2025-11-25 07:01:16,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871188797248)>', '<ExcThread(monitor, started 139870701872896)>']
[2025-11-25 08:01:21] 2025-11-25 07:01:16,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 08:01:21] 2025-11-25 07:01:16,549 | INFO     | [monitor] control thread has ended
[2025-11-25 08:01:21] 2025-11-25 07:01:21,123 | INFO     | all workflow threads have been joined
[2025-11-25 08:01:21] 2025-11-25 07:01:21,123 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 08:01:21] 2025-11-25 07:01:21,123 | INFO     | traces error code: 0
[2025-11-25 08:01:21] 2025-11-25 07:01:21,124 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 08:01:21] 2025-11-25 07:01:21,173 [wrapper] ==== pilot stdout END ====
[2025-11-25 08:01:21] 2025-11-25 07:01:21,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 08:01:21] 2025-11-25 07:01:21,178 [wrapper] pilotpid: 1250366
[2025-11-25 08:01:21] 2025-11-25 07:01:21,180 [wrapper] Pilot exit status: 0
[2025-11-25 08:01:21] 2025-11-25 07:01:21,188 [wrapper] pandaids: 6894292781
[2025-11-25 08:01:21] 2025-11-25 07:01:21,206 [wrapper] cleanup supervisor_pilot 1306611 1250367
[2025-11-25 08:01:21] 2025-11-25 07:01:21,208 [wrapper] Test setup, not cleaning
[2025-11-25 08:01:21] 2025-11-25 07:01:21,211 [wrapper] apfmon messages muted
[2025-11-25 08:01:21] 2025-11-25 07:01:21,213 [wrapper] ==== wrapper stdout END ====
[2025-11-25 08:01:21] 2025-11-25 07:01:21,216 [wrapper] ==== wrapper stderr END ====
[2025-11-25 08:01:21]  *** Error codes and diagnostics ***
[2025-11-25 08:01:21]     "exeErrorCode": 0,
[2025-11-25 08:01:21]     "exeErrorDiag": "",
[2025-11-25 08:01:21]     "pilotErrorCode": 0,
[2025-11-25 08:01:21]     "pilotErrorDiag": "",
[2025-11-25 08:01:21]  *** Listing of results directory ***
[2025-11-25 08:01:21] total 1311088
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc    576529 Nov 21 13:22 pilot3.tar.gz
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc      5112 Nov 21 13:36 queuedata.json
[2025-11-25 08:01:21] -rwx------ 1 boinc boinc     36292 Nov 21 13:38 runpilot2-wrapper.sh
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc       100 Nov 25 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 08:01:21] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 00:01 run_atlas
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc       105 Nov 25 00:01 job.xml
[2025-11-25 08:01:21] -rw-r--r-- 2 boinc boinc 412009854 Nov 25 00:01 EVNT.47493127._002456.pool.root.1
[2025-11-25 08:01:21] -rw-r--r-- 2 boinc boinc    590108 Nov 25 00:01 input.tar.gz
[2025-11-25 08:01:21] -rw-r--r-- 2 boinc boinc     15847 Nov 25 00:01 start_atlas.sh
[2025-11-25 08:01:21] drwxrwx--x 2 boinc boinc      4096 Nov 25 00:01 shared
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc         0 Nov 25 00:01 boinc_setup_complete
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc      6449 Nov 25 00:01 init_data.xml
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc         0 Nov 25 00:01 boinc_lockfile
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc      2784 Nov 25 00:01 pandaJob.out
[2025-11-25 08:01:21] -rw------- 1 boinc boinc    991801 Nov 25 00:01 agis_schedconf.cvmfs.json
[2025-11-25 08:01:21] drwx------ 5 boinc boinc      4096 Nov 25 00:01 pilot3
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc       531 Nov 25 07:57 boinc_task_state.xml
[2025-11-25 08:01:21] -rw------- 1 boinc boinc 916211425 Nov 25 08:00 HITS.47533967._004279.pool.root.1
[2025-11-25 08:01:21] -rw------- 1 boinc boinc      1025 Nov 25 08:00 memory_monitor_summary.json
[2025-11-25 08:01:21] -rw------- 1 boinc boinc   1516227 Nov 25 08:00 agis_ddmendpoints.agis.ALL.json
[2025-11-25 08:01:21] -rw------- 1 boinc boinc   1170110 Nov 25 08:00 log.47533967._004279.job.log.tgz.1
[2025-11-25 08:01:21] -rw------- 1 boinc boinc      8564 Nov 25 08:00 heartbeat.json
[2025-11-25 08:01:21] -rw------- 1 boinc boinc        95 Nov 25 08:01 pilot_heartbeat.json
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc      8192 Nov 25 08:01 boinc_mmap_file
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc        28 Nov 25 08:01 wrapper_checkpoint.txt
[2025-11-25 08:01:21] -rw------- 1 boinc boinc      4824 Nov 25 08:01 pilotlog.txt
[2025-11-25 08:01:21] -rw------- 1 boinc boinc   4043230 Nov 25 08:01 log.47533967._004279.job.log.1
[2025-11-25 08:01:21] -rw------- 1 boinc boinc       353 Nov 25 08:01 output.list
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc       620 Nov 25 08:01 runtime_log
[2025-11-25 08:01:21] -rw------- 1 boinc boinc   5232640 Nov 25 08:01 result.tar.gz
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc      8913 Nov 25 08:01 runtime_log.err
[2025-11-25 08:01:21] -rw------- 1 boinc boinc       668 Nov 25 08:01 P3bMDmfafg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjQJKDmLAwQ0m.diag
[2025-11-25 08:01:21] -rw-r--r-- 1 boinc boinc      6201 Nov 25 08:01 stderr.txt
[2025-11-25 08:01:21] HITS file was successfully produced:
[2025-11-25 08:01:21] -rw------- 1 boinc boinc 916211425 Nov 25 08:00 shared/HITS.pool.root.1
[2025-11-25 08:01:21]  *** Contents of shared directory: ***
[2025-11-25 08:01:21] total 1302812
[2025-11-25 08:01:21] -rw-r--r-- 2 boinc boinc 412009854 Nov 25 00:01 ATLAS.root_0
[2025-11-25 08:01:21] -rw-r--r-- 2 boinc boinc    590108 Nov 25 00:01 input.tar.gz
[2025-11-25 08:01:21] -rw-r--r-- 2 boinc boinc     15847 Nov 25 00:01 start_atlas.sh
[2025-11-25 08:01:21] -rw------- 1 boinc boinc 916211425 Nov 25 08:00 HITS.pool.root.1
[2025-11-25 08:01:21] -rw------- 1 boinc boinc   5232640 Nov 25 08:01 result.tar.gz
08:01:22 (1246630): run_atlas exited; CPU time 84834.839435
08:01:22 (1246630): called boinc_finish(0)

</stderr_txt>
]]>

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