Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:08:04 (901604): wrapper (7.7.26015): starting
20:08:04 (901604): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 20:08:04] Arguments: --nthreads 3
[2025-11-24 20:08:04] Threads: 3
[2025-11-24 20:08:04] Checking for CVMFS
[2025-11-24 20:08:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 20:08:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 20:08:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 20:08:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 20:08:05] 2.9.2.0 3943730 8689 86140 153255 1 81 29716225 36864000 0 130560 0 3208475 99.924 467992 4510 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 20:08:05] CVMFS is ok
[2025-11-24 20:08:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 20:08:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 20:08:05] Further information can be found at the LHC@home message board.
[2025-11-24 20:08:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 20:08:05] Checking for apptainer binary...
[2025-11-24 20:08:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 20:08:05] Running /usr/bin/apptainer --version
[2025-11-24 20:08:05] apptainer version 1.4.1-1.1
[2025-11-24 20:08:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 20:08:05] thA331a
[2025-11-24 20:08:05] apptainer works
[2025-11-24 20:08:05] Set ATHENA_PROC_NUMBER=3
[2025-11-24 20:08:05] Set ATHENA_CORE_NUMBER=3
[2025-11-24 20:08:05] Starting ATLAS job with PandaID=6894292789
[2025-11-24 20:08:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 04:03:56]  *** The last 200 lines of the pilot log: ***
[2025-11-25 04:03:56] ID_LIKE="rhel fedora"
[2025-11-25 04:03:56] VERSION_ID="7"
[2025-11-25 04:03:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 04:03:56] ANSI_COLOR="0;31"
[2025-11-25 04:03:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 04:03:56] HOME_URL="https://www.centos.org/"
[2025-11-25 04:03:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 04:03:56] 
[2025-11-25 04:03:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 04:03:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 04:03:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 04:03:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 04:03:56] 
[2025-11-25 04:03:56] 2025-11-25 03:03:14,477 | INFO     | ***************************************
[2025-11-25 04:03:56] 2025-11-25 03:03:14,980 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 04:03:56] 2025-11-25 03:03:14,992 | INFO     | sufficient remaining disk space (327125303296 B)
[2025-11-25 04:03:56] 2025-11-25 03:03:14,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 04:03:56] 2025-11-25 03:03:14,993 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 04:03:56] 2025-11-25 03:03:14,993 | INFO     | update_server=False
[2025-11-25 04:03:56] 2025-11-25 03:03:14,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 04:03:56] 2025-11-25 03:03:14,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 04:03:56] 2025-11-25 03:03:14,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:03:56] 2025-11-25 03:03:14,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:03:56] 2025-11-25 03:03:14,993 | INFO     | aborting loop
[2025-11-25 04:03:56] 2025-11-25 03:03:15,445 | INFO     | all payload control threads have been joined
[2025-11-25 04:03:56] 2025-11-25 03:03:15,825 | INFO     | all data control threads have been joined
[2025-11-25 04:03:56] 2025-11-25 03:03:15,998 | INFO     | [job] retrieve thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:15,999 | INFO     | [job] queue monitor thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:15,999 | INFO     | [job] job monitor thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:16,005 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:16,141 | INFO     | all job control threads have been joined
[2025-11-25 04:03:56] 2025-11-25 03:03:16,451 | INFO     | [payload] control thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:16,455 | INFO     | [payload] validate_post thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:16,825 | INFO     | [data] control thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:16,891 | INFO     | [data] copytool_in thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:16,999 | INFO     | [data] copytool_out thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:17,147 | INFO     | [job] control thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:17,150 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:17,442 | INFO     | [job] validate thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:17,493 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:17,514 | INFO     | [payload] failed_post thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:17,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 04:03:56] 2025-11-25 03:03:21,780 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:25,129 | INFO     | job.realtimelogging is not enabled
[2025-11-25 04:03:56] 2025-11-25 03:03:26,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 04:03:56] 2025-11-25 03:03:44,592 | INFO     | PID=905328 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 04:03:56] 2025-11-25 03:03:44,592 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 04:03:56] 2025-11-25 03:03:44,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 04:03:56] 2025-11-25 03:03:44,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 04:03:56] 2025-11-25 03:03:50,287 | INFO     | [monitor] cgroup control has ended
[2025-11-25 04:03:56] 2025-11-25 03:03:51,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464132638528)>', '<ExcThread(monitor, started 140463784834816)>']
[2025-11-25 04:03:56] 2025-11-25 03:03:51,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 04:03:56] 2025-11-25 03:03:51,630 | INFO     | [monitor] control thread has ended
[2025-11-25 04:03:56] 2025-11-25 03:03:56,289 | INFO     | all workflow threads have been joined
[2025-11-25 04:03:56] 2025-11-25 03:03:56,289 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 04:03:56] 2025-11-25 03:03:56,290 | INFO     | traces error code: 0
[2025-11-25 04:03:56] 2025-11-25 03:03:56,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 04:03:56] 2025-11-25 03:03:56,339 [wrapper] ==== pilot stdout END ====
[2025-11-25 04:03:56] 2025-11-25 03:03:56,341 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 04:03:56] 2025-11-25 03:03:56,343 [wrapper] pilotpid: 905328
[2025-11-25 04:03:56] 2025-11-25 03:03:56,346 [wrapper] Pilot exit status: 0
[2025-11-25 04:03:56] 2025-11-25 03:03:56,353 [wrapper] pandaids: 6894292789
[2025-11-25 04:03:56] 2025-11-25 03:03:56,369 [wrapper] cleanup supervisor_pilot  962595 905329
[2025-11-25 04:03:56] 2025-11-25 03:03:56,371 [wrapper] Test setup, not cleaning
[2025-11-25 04:03:56] 2025-11-25 03:03:56,373 [wrapper] apfmon messages muted
[2025-11-25 04:03:56] 2025-11-25 03:03:56,376 [wrapper] ==== wrapper stdout END ====
[2025-11-25 04:03:56] 2025-11-25 03:03:56,378 [wrapper] ==== wrapper stderr END ====
[2025-11-25 04:03:56]  *** Error codes and diagnostics ***
[2025-11-25 04:03:56]     "exeErrorCode": 0,
[2025-11-25 04:03:56]     "exeErrorDiag": "",
[2025-11-25 04:03:56]     "pilotErrorCode": 0,
[2025-11-25 04:03:56]     "pilotErrorDiag": "",
[2025-11-25 04:03:56]  *** Listing of results directory ***
[2025-11-25 04:03:56] total 1309004
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc    576529 Nov 21 13:22 pilot3.tar.gz
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc      5112 Nov 21 13:36 queuedata.json
[2025-11-25 04:03:56] -rwx------ 1 boinc boinc     36292 Nov 21 13:40 runpilot2-wrapper.sh
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc       100 Nov 24 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 04:03:56] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 20:08 run_atlas
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc       105 Nov 24 20:08 job.xml
[2025-11-25 04:03:56] -rw-r--r-- 2 boinc boinc 408994270 Nov 24 20:08 EVNT.47493127._002457.pool.root.1
[2025-11-25 04:03:56] -rw-r--r-- 2 boinc boinc    590106 Nov 24 20:08 input.tar.gz
[2025-11-25 04:03:56] -rw-r--r-- 2 boinc boinc     15847 Nov 24 20:08 start_atlas.sh
[2025-11-25 04:03:56] drwxrwx--x 2 boinc boinc      4096 Nov 24 20:08 shared
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc         0 Nov 24 20:08 boinc_setup_complete
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc      6441 Nov 24 20:08 init_data.xml
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc         0 Nov 24 20:08 boinc_lockfile
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc      2784 Nov 24 20:08 pandaJob.out
[2025-11-25 04:03:56] -rw------- 1 boinc boinc    991801 Nov 24 20:08 agis_schedconf.cvmfs.json
[2025-11-25 04:03:56] drwx------ 5 boinc boinc      4096 Nov 24 20:08 pilot3
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc       532 Nov 25 03:59 boinc_task_state.xml
[2025-11-25 04:03:56] -rw------- 1 boinc boinc 917178493 Nov 25 04:02 HITS.47533967._004287.pool.root.1
[2025-11-25 04:03:56] -rw------- 1 boinc boinc      1025 Nov 25 04:03 memory_monitor_summary.json
[2025-11-25 04:03:56] -rw------- 1 boinc boinc   1516227 Nov 25 04:03 agis_ddmendpoints.agis.ALL.json
[2025-11-25 04:03:56] -rw------- 1 boinc boinc   1159594 Nov 25 04:03 log.47533967._004287.job.log.tgz.1
[2025-11-25 04:03:56] -rw------- 1 boinc boinc      8565 Nov 25 04:03 heartbeat.json
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc        28 Nov 25 04:03 wrapper_checkpoint.txt
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc      8192 Nov 25 04:03 boinc_mmap_file
[2025-11-25 04:03:56] -rw------- 1 boinc boinc        95 Nov 25 04:03 pilot_heartbeat.json
[2025-11-25 04:03:56] -rw------- 1 boinc boinc      4823 Nov 25 04:03 pilotlog.txt
[2025-11-25 04:03:56] -rw------- 1 boinc boinc   4008142 Nov 25 04:03 log.47533967._004287.job.log.1
[2025-11-25 04:03:56] -rw------- 1 boinc boinc       353 Nov 25 04:03 output.list
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc       620 Nov 25 04:03 runtime_log
[2025-11-25 04:03:56] -rw------- 1 boinc boinc   5191680 Nov 25 04:03 result.tar.gz
[2025-11-25 04:03:56] -rw------- 1 boinc boinc       666 Nov 25 04:03 sc7MDmfcfg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmQJKDm1g8Ynm.diag
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc      8903 Nov 25 04:03 runtime_log.err
[2025-11-25 04:03:56] -rw-r--r-- 1 boinc boinc      8681 Nov 25 04:03 stderr.txt
[2025-11-25 04:03:56] HITS file was successfully produced:
[2025-11-25 04:03:56] -rw------- 1 boinc boinc 917178493 Nov 25 04:02 shared/HITS.pool.root.1
[2025-11-25 04:03:56]  *** Contents of shared directory: ***
[2025-11-25 04:03:56] total 1300768
[2025-11-25 04:03:56] -rw-r--r-- 2 boinc boinc 408994270 Nov 24 20:08 ATLAS.root_0
[2025-11-25 04:03:56] -rw-r--r-- 2 boinc boinc    590106 Nov 24 20:08 input.tar.gz
[2025-11-25 04:03:56] -rw-r--r-- 2 boinc boinc     15847 Nov 24 20:08 start_atlas.sh
[2025-11-25 04:03:56] -rw------- 1 boinc boinc 917178493 Nov 25 04:02 HITS.pool.root.1
[2025-11-25 04:03:56] -rw------- 1 boinc boinc   5191680 Nov 25 04:03 result.tar.gz
04:03:58 (901604): run_atlas exited; CPU time 84154.506192
04:03:58 (901604): called boinc_finish(0)

</stderr_txt>
]]>

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