Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:18:47 (7424): wrapper (7.7.26015): starting
05:18:47 (7424): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 05:18:47] Arguments: --nthreads 8
[2025-11-25 05:18:47] Threads: 8
[2025-11-25 05:18:47] Checking for CVMFS
[2025-11-25 05:18:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:18:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:18:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:18:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:18:49] 2.11.2.0 3740 283424 141944 153270 2 201 23528514 25165825 4532 130560 10 131626213 99.873 79024549 2852 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 05:18:49] CVMFS is ok
[2025-11-25 05:18:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:18:49] Checking for apptainer binary...
[2025-11-25 05:18:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:18:49] Running /usr/bin/apptainer --version
[2025-11-25 05:18:49] apptainer version 1.3.2-1.el7
[2025-11-25 05:18:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:18:53] cg-vwn234.simple-grid.lan
[2025-11-25 05:18:53] apptainer works
[2025-11-25 05:18:53] Set ATHENA_PROC_NUMBER=8
[2025-11-25 05:18:53] Set ATHENA_CORE_NUMBER=8
[2025-11-25 05:18:53] Starting ATLAS job with PandaID=6894292035
[2025-11-25 05:18:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:02:19]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:02:19] 2025-11-26 06:01:05,713 | INFO     | time since job start (92318s) is within the limit (172800.0s)
[2025-11-26 07:02:19] 2025-11-26 06:01:06,518 | INFO     | monitor loop #6190: job 0:6894292035 is in state 'finished'
[2025-11-26 07:02:19] 2025-11-26 06:01:06,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:02:19] 2025-11-26 06:01:06,956 | INFO     | PID=11292 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 07:02:19] 2025-11-26 06:01:06,957 | INFO     | .. there are 9 such processes running
[2025-11-26 07:02:19] 2025-11-26 06:01:07,960 | INFO     | time since job start (92320s) is within the limit (172800.0s)
[2025-11-26 07:02:19] 2025-11-26 06:01:09,024 | INFO     | monitor loop #6191: job 0:6894292035 is in state 'finished'
[2025-11-26 07:02:19] 2025-11-26 06:01:09,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:02:19] 2025-11-26 06:01:09,967 | INFO     | time since job start (92322s) is within the limit (172800.0s)
[2025-11-26 07:02:19] 2025-11-26 06:01:11,529 | INFO     | monitor loop #6192: job 0:6894292035 is in state 'finished'
[2025-11-26 07:02:19] 2025-11-26 06:01:11,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:02:19] 2025-11-26 06:01:11,981 | INFO     | time since job start (92324s) is within the limit (172800.0s)
[2025-11-26 07:02:19] 2025-11-26 06:01:13,993 | INFO     | time since job start (92326s) is within the limit (172800.0s)
[2025-11-26 07:02:19] 2025-11-26 06:01:14,044 | INFO     | monitor loop #6193: job 0:6894292035 is in state 'finished'
[2025-11-26 07:02:19] 2025-11-26 06:01:14,044 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:02:19] 2025-11-26 06:01:15,513 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 07:02:19] 2025-11-26 06:01:15,514 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 07:02:19] 2025-11-26 06:01:15,516 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6894292035/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:02:19] 2025-11-26 06:01:15,517 | INFO     | extracted standard info from prmon json
[2025-11-26 07:02:19] 2025-11-26 06:01:15,517 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:02:19] 2025-11-26 06:01:15,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:02:19] 2025-11-26 06:01:15,558 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:02:19] 2025-11-26 06:01:15,561 | INFO     | sum of square deviations: 1054921411927.0619
[2025-11-26 07:02:19] 2025-11-26 06:01:15,688 | INFO     | sum of deviations: 2842111714236.9106
[2025-11-26 07:02:19] 2025-11-26 06:01:15,688 | INFO     | mean x: 1764090877.6609042
[2025-11-26 07:02:19] 2025-11-26 06:01:15,688 | INFO     | mean y: 2841265.335106383
[2025-11-26 07:02:19] 2025-11-26 06:01:15,688 | INFO     | intersect: -4749876133.034642
[2025-11-26 07:02:19] 2025-11-26 06:01:15,690 | INFO     | chi2: 24.33164595296499
[2025-11-26 07:02:19] 2025-11-26 06:01:15,693 | INFO     | sum of square deviations: 1044435682720.2991
[2025-11-26 07:02:19] 2025-11-26 06:01:15,776 | INFO     | sum of deviations: 3341810976021.652
[2025-11-26 07:02:19] 2025-11-26 06:01:15,776 | INFO     | mean x: 1764090725.1647766
[2025-11-26 07:02:19] 2025-11-26 06:01:15,777 | INFO     | mean y: 2848531.993328886
[2025-11-26 07:02:19] 2025-11-26 06:01:15,777 | INFO     | intersect: -5641594534.8110075
[2025-11-26 07:02:19] 2025-11-26 06:01:15,779 | INFO     | chi2: 21.033857589852285
[2025-11-26 07:02:19] 2025-11-26 06:01:15,779 | INFO     | current chi2=21.033857589852285 (change=13.553494775847028 %)
[2025-11-26 07:02:19] 2025-11-26 06:01:15,779 | INFO     | right removable region: 1498
[2025-11-26 07:02:19] 2025-11-26 06:01:15,781 | INFO     | sum of square deviations: 1044434617660.3004
[2025-11-26 07:02:19] 2025-11-26 06:01:15,869 | INFO     | sum of deviations: 2216921761850.206
[2025-11-26 07:02:19] 2025-11-26 06:01:15,869 | INFO     | mean x: 1764091030.1647766
[2025-11-26 07:02:19] 2025-11-26 06:01:15,869 | INFO     | mean y: 2850356.602401601
[2025-11-26 07:02:19] 2025-11-26 06:01:15,869 | INFO     | intersect: -3741617443.0363836
[2025-11-26 07:02:19] 2025-11-26 06:01:15,871 | INFO     | chi2: 19.79943513113852
[2025-11-26 07:02:19] 2025-11-26 06:01:15,871 | INFO     | current chi2=19.79943513113852 (change=18.626815590641073 %)
[2025-11-26 07:02:19] 2025-11-26 06:01:15,871 | INFO     | left removable region: 10
[2025-11-26 07:02:19] 2025-11-26 06:01:15,874 | INFO     | sum of square deviations: 1021610043173.2662
[2025-11-26 07:02:19] 2025-11-26 06:01:15,961 | INFO     | sum of deviations: 2327047979220.8374
[2025-11-26 07:02:19] 2025-11-26 06:01:15,962 | INFO     | mean x: 1764090999.673387
[2025-11-26 07:02:19] 2025-11-26 06:01:15,962 | INFO     | mean y: 2866817.6498655914
[2025-11-26 07:02:19] 2025-11-26 06:01:15,962 | INFO     | intersect: -4015422179.5887694
[2025-11-26 07:02:19] 2025-11-26 06:01:15,964 | INFO     | chi2: 12.660160024011148
[2025-11-26 07:02:19] 2025-11-26 06:01:15,964 | INFO     | current memory leak: 2.28 B/s (using 1488 data points, chi2=12.66)
[2025-11-26 07:02:19] 2025-11-26 06:01:15,965 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-26 07:02:19] 2025-11-26 06:01:15,965 | INFO     | ..............................
[2025-11-26 07:02:19] 2025-11-26 06:01:15,965 | INFO     | . Timing measurements:
[2025-11-26 07:02:19] 2025-11-26 06:01:15,965 | INFO     | . get job = 0 s
[2025-11-26 07:02:19] 2025-11-26 06:01:15,965 | INFO     | . initial setup = 8 s
[2025-11-26 07:02:19] 2025-11-26 06:01:15,966 | INFO     | . payload setup = 130 s
[2025-11-26 07:02:19] 2025-11-26 06:01:15,966 | INFO     | . stage-in = 0 s
[2025-11-26 07:02:19] 2025-11-26 06:01:15,966 | INFO     | . payload execution = 91891 s
[2025-11-26 07:02:19] 2025-11-26 06:01:15,966 | INFO     | . stage-out = 5 s
[2025-11-26 07:02:19] 2025-11-26 06:01:15,966 | INFO     | . log creation = 2 s
[2025-11-26 07:02:19] 2025-11-26 06:01:15,966 | INFO     | ..............................
[2025-11-26 07:02:19] 2025-11-26 06:01:16,021 | INFO     | time since job start (92329s) is within the limit (172800.0s)
[2025-11-26 07:02:19] 2025-11-26 06:01:16,601 | INFO     | 
[2025-11-26 07:02:19] 2025-11-26 06:01:16,601 | INFO     | job summary report
[2025-11-26 07:02:19] 2025-11-26 06:01:16,601 | INFO     | --------------------------------------------------
[2025-11-26 07:02:19] 2025-11-26 06:01:16,601 | INFO     | PanDA job id: 6894292035
[2025-11-26 07:02:19] 2025-11-26 06:01:16,601 | INFO     | task id: 47533967
[2025-11-26 07:02:19] 2025-11-26 06:01:16,601 | INFO     | errors: (none)
[2025-11-26 07:02:19] 2025-11-26 06:01:16,601 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | pilot state: finished 
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | transexitcode: 0
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | exeerrorcode: 0
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | exeerrordiag: 
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | exitcode: 0
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | exitmsg: OK
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | cpuconsumptiontime: 340629 s
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | nevents: 1000
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | neventsw: 0
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | pid: 17820
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | pgrp: 17820
[2025-11-26 07:02:19] 2025-11-26 06:01:16,602 | INFO     | corecount: 8
[2025-11-26 07:02:19] 2025-11-26 06:01:16,603 | INFO     | event service: False
[2025-11-26 07:02:19] 2025-11-26 06:01:16,603 | INFO     | sizes: {0: 2284027, 1: 2284282, 2: 2284282, 13: 2284310, 23: 2284366, 34: 2284394, 45: 2284550, 56: 2284578, 66: 2284606, 77: 2284634, 88: 2284690, 93: 2285260, 99
[2025-11-26 07:02:19] 2025-11-26 06:01:16,603 | INFO     | --------------------------------------------------
[2025-11-26 07:02:19] 2025-11-26 06:01:16,603 | INFO     | 
[2025-11-26 07:02:19] 2025-11-26 06:01:16,603 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-11-26 07:02:19] 2025-11-26 06:01:17,277 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,277 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,278 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,278 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,278 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,278 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,278 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:02:19] 2025-11-26 06:01:17,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:02:19] 2025-11-26 06:01:17,279 | INFO     | job 6894292035 has completed (purged errors)
[2025-11-26 07:02:19] 2025-11-26 06:01:17,279 | INFO     | overall cleanup function is called
[2025-11-26 07:02:19] 2025-11-26 06:01:18,296 | INFO     | --- collectZombieJob: --- 10, [17820]
[2025-11-26 07:02:19] 2025-11-26 06:01:18,296 | INFO     | zombie collector waiting for pid 17820
[2025-11-26 07:02:19] 2025-11-26 06:01:18,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:02:19] 2025-11-26 06:01:18,296 | INFO     | collected zombie processes
[2025-11-26 07:02:19] 2025-11-26 06:01:18,296 | INFO     | will attempt to kill all subprocesses of pid=17820
[2025-11-26 07:02:19] 2025-11-26 06:01:18,396 | INFO     | process IDs to be killed: [17820] (in reverse order)
[2025-11-26 07:02:19] 2025-11-26 06:01:19,442 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:02:19] 2025-11-26 06:01:19,442 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:02:19] 2025-11-26 06:01:19,445 | INFO     | did not find any defunct processes belonging to 17820
[2025-11-26 07:02:19] 2025-11-26 06:01:19,449 | INFO     | did not find any defunct processes belonging to 17820
[2025-11-26 07:02:19] 2025-11-26 06:01:19,500 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:02:19] 2025-11-26 06:01:19,500 | INFO     | ready for new job
[2025-11-26 07:02:19] 2025-11-26 06:01:19,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:02:19] 2025-11-26 06:01:19,507 | INFO     | ***************************************
[2025-11-26 07:02:19] 2025-11-26 06:01:19,507 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:02:19] 2025-11-26 06:01:19,507 | INFO     | ***************************************
[2025-11-26 07:02:19] 2025-11-26 06:01:19,507 | INFO     | 
[2025-11-26 07:02:19] 2025-11-26 06:01:19,508 | INFO     | pilot is running in a VM
[2025-11-26 07:02:19] 2025-11-26 06:01:19,508 | INFO     | architecture information:
[2025-11-26 07:02:19] 2025-11-26 06:01:19,523 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:02:19] 2025-11-26 06:01:19,764 | INFO     | cat /etc/os-release:
[2025-11-26 07:02:19] NAME="CentOS Linux"
[2025-11-26 07:02:19] VERSION="7 (Core)"
[2025-11-26 07:02:19] ID="centos"
[2025-11-26 07:02:19] ID_LIKE="rhel fedora"
[2025-11-26 07:02:19] VERSION_ID="7"
[2025-11-26 07:02:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:02:19] ANSI_COLOR="0;31"
[2025-11-26 07:02:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:02:19] HOME_URL="https://www.centos.org/"
[2025-11-26 07:02:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:02:19] 
[2025-11-26 07:02:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:02:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:02:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:02:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:02:19] 
[2025-11-26 07:02:19] 2025-11-26 06:01:19,765 | INFO     | ***************************************
[2025-11-26 07:02:19] 2025-11-26 06:01:20,268 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-11-26 07:02:19] 2025-11-26 06:01:20,516 | INFO     | sufficient remaining disk space (495351496704 B)
[2025-11-26 07:02:19] 2025-11-26 06:01:20,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:02:19] 2025-11-26 06:01:20,516 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:02:19] 2025-11-26 06:01:20,516 | INFO     | update_server=False
[2025-11-26 07:02:19] 2025-11-26 06:01:20,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:02:19] 2025-11-26 06:01:20,521 | INFO     | all job control threads have been joined
[2025-11-26 07:02:19] 2025-11-26 06:01:20,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:02:19] 2025-11-26 06:01:20,524 | INFO     | aborting loop
[2025-11-26 07:02:19] 2025-11-26 06:01:20,688 | INFO     | all payload control threads have been joined
[2025-11-26 07:02:19] 2025-11-26 06:01:21,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:02:19] 2025-11-26 06:01:21,388 | INFO     | all data control threads have been joined
[2025-11-26 07:02:19] 2025-11-26 06:01:21,523 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:21,526 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:21,527 | INFO     | [job] control thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:21,530 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:21,557 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:21,694 | INFO     | [payload] control thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:21,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:02:19] 2025-11-26 06:01:21,838 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:21,940 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:21,969 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:22,150 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:22,394 | INFO     | [data] control thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:22,400 | INFO     | [job] validate thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:22,906 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:22,926 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:23,827 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:23,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:02:19] 2025-11-26 06:01:27,980 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:02:19] 2025-11-26 06:01:49,223 | INFO     | PID=11292 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 07:02:19] 2025-11-26 06:01:49,224 | INFO     | .. there are 9 such processes running
[2025-11-26 07:02:19] 2025-11-26 06:01:49,224 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:02:19] 2025-11-26 06:01:49,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:02:19] 2025-11-26 06:01:49,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:02:19] 2025-11-26 06:02:08,053 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:02:19] 2025-11-26 06:02:09,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816565565248)>', '<ExcThread(monitor, started 139815982970624)>']
[2025-11-26 07:02:19] 2025-11-26 06:02:10,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:02:19] 2025-11-26 06:02:10,349 | INFO     | [monitor] control thread has ended
[2025-11-26 07:02:19] 2025-11-26 06:02:14,801 | INFO     | all workflow threads have been joined
[2025-11-26 07:02:19] 2025-11-26 06:02:14,801 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:02:19] 2025-11-26 06:02:14,801 | INFO     | traces error code: 0
[2025-11-26 07:02:19] 2025-11-26 06:02:14,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:02:19] 2025-11-26 06:02:15,064 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:02:19] 2025-11-26 06:02:15,138 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:02:19] 2025-11-26 06:02:15,181 [wrapper] pilotpid: 11292
[2025-11-26 07:02:19] 2025-11-26 06:02:15,234 [wrapper] Pilot exit status: 0
[2025-11-26 07:02:19] 2025-11-26 06:02:15,610 [wrapper] pandaids: 6894292035
[2025-11-26 07:02:19] 2025-11-26 06:02:16,341 [wrapper] cleanup supervisor_pilot 23983 11293
[2025-11-26 07:02:19] 2025-11-26 06:02:16,407 [wrapper] Test setup, not cleaning
[2025-11-26 07:02:19] 2025-11-26 06:02:16,443 [wrapper] apfmon messages muted
[2025-11-26 07:02:19] 2025-11-26 06:02:16,477 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:02:19] 2025-11-26 06:02:16,538 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:02:19]  *** Error codes and diagnostics ***
[2025-11-26 07:02:19]     "exeErrorCode": 0,
[2025-11-26 07:02:19]     "exeErrorDiag": "",
[2025-11-26 07:02:19]     "pilotErrorCode": 0,
[2025-11-26 07:02:19]     "pilotErrorDiag": "",
[2025-11-26 07:02:19]  *** Listing of results directory ***
[2025-11-26 07:02:19] total 1340280
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc    576529 Nov 21 13:04 pilot3.tar.gz
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc      5112 Nov 21 13:15 queuedata.json
[2025-11-26 07:02:19] -rwx------. 1 boinc boinc     36292 Nov 21 13:16 runpilot2-wrapper.sh
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc       100 Nov 25 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:02:19] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 05:18 run_atlas
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc       105 Nov 25 05:18 job.xml
[2025-11-26 07:02:19] -rw-r--r--. 2 boinc boinc 410143456 Nov 25 05:18 EVNT.47493127._002446.pool.root.1
[2025-11-26 07:02:19] drwxrwx--x. 2 boinc boinc        68 Nov 25 05:18 shared
[2025-11-26 07:02:19] -rw-r--r--. 2 boinc boinc    590107 Nov 25 05:18 input.tar.gz
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc      6393 Nov 25 05:18 init_data.xml
[2025-11-26 07:02:19] -rw-r--r--. 2 boinc boinc     15847 Nov 25 05:18 start_atlas.sh
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc         0 Nov 25 05:18 boinc_lockfile
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc      2782 Nov 25 05:18 pandaJob.out
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc    991801 Nov 25 05:22 agis_schedconf.cvmfs.json
[2025-11-26 07:02:19] drwx------. 5 boinc boinc      4096 Nov 25 05:22 pilot3
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc       533 Nov 26 06:30 boinc_task_state.xml
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc 928736571 Nov 26 06:58 HITS.47533967._004171.pool.root.1
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc      1030 Nov 26 06:59 memory_monitor_summary.json
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc   1516240 Nov 26 06:59 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc   2552938 Nov 26 06:59 log.47533967._004171.job.log.tgz.1
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc        95 Nov 26 07:01 pilot_heartbeat.json
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc      8628 Nov 26 07:01 heartbeat.json
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc      8192 Nov 26 07:02 boinc_mmap_file
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc        29 Nov 26 07:02 wrapper_checkpoint.txt
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc      4885 Nov 26 07:02 pilotlog.txt
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc  12279561 Nov 26 07:02 log.47533967._004171.job.log.1
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc       353 Nov 26 07:02 output.list
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc       620 Nov 26 07:02 runtime_log
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc  14848000 Nov 26 07:02 result.tar.gz
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc      8833 Nov 26 07:02 runtime_log.err
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc       662 Nov 26 07:02 lotMDmfEfg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYPJKDmgdX2Gm.diag
[2025-11-26 07:02:19] -rw-r--r--. 1 boinc boinc     21512 Nov 26 07:02 stderr.txt
[2025-11-26 07:02:19] HITS file was successfully produced:
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc 928736571 Nov 26 06:58 shared/HITS.pool.root.1
[2025-11-26 07:02:19]  *** Contents of shared directory: ***
[2025-11-26 07:02:19] total 1322600
[2025-11-26 07:02:19] -rw-r--r--. 2 boinc boinc 410143456 Nov 25 05:18 ATLAS.root_0
[2025-11-26 07:02:19] -rw-r--r--. 2 boinc boinc    590107 Nov 25 05:18 input.tar.gz
[2025-11-26 07:02:19] -rw-r--r--. 2 boinc boinc     15847 Nov 25 05:18 start_atlas.sh
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc 928736571 Nov 26 06:58 HITS.pool.root.1
[2025-11-26 07:02:19] -rw-------. 1 boinc boinc  14848000 Nov 26 07:02 result.tar.gz
07:02:21 (7424): run_atlas exited; CPU time 341257.321941
07:02:21 (7424): called boinc_finish(0)

</stderr_txt>
]]>

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