Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:01:47 (13522): wrapper (7.7.26015): starting
05:01:47 (13522): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 05:01:47] Arguments: --nthreads 8
[2025-11-25 05:01:47] Threads: 8
[2025-11-25 05:01:47] Checking for CVMFS
[2025-11-25 05:01:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:01:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:01:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:01:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:01:50] 2.11.2.0 20118 283274 138748 153268 0 92 18229683 25165825 1081 130560 10 125529951 99.868 77211316 2500 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-25 05:01:50] CVMFS is ok
[2025-11-25 05:01:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:01:50] Checking for apptainer binary...
[2025-11-25 05:01:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:01:50] Running /usr/bin/apptainer --version
[2025-11-25 05:01:51] apptainer version 1.3.2-1.el7
[2025-11-25 05:01:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:02:22] cg-vwn344.simple-grid.lan
[2025-11-25 05:02:22] apptainer works
[2025-11-25 05:02:23] Set ATHENA_PROC_NUMBER=8
[2025-11-25 05:02:23] Set ATHENA_CORE_NUMBER=8
[2025-11-25 05:02:23] Starting ATLAS job with PandaID=6895330887
[2025-11-25 05:02:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 05:58:15]  *** The last 200 lines of the pilot log: ***
[2025-11-26 05:58:15] 2025-11-26 04:57:25,794 | INFO     | monitor loop #6013: job 0:6895330887 is in state 'finished'
[2025-11-26 05:58:15] 2025-11-26 04:57:25,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:58:15] 2025-11-26 04:57:26,888 | INFO     | time since job start (89412s) is within the limit (172800.0s)
[2025-11-26 05:58:15] 2025-11-26 04:57:28,302 | INFO     | monitor loop #6014: job 0:6895330887 is in state 'finished'
[2025-11-26 05:58:15] 2025-11-26 04:57:28,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:58:15] 2025-11-26 04:57:28,897 | INFO     | time since job start (89414s) is within the limit (172800.0s)
[2025-11-26 05:58:15] 2025-11-26 04:57:30,808 | INFO     | monitor loop #6015: job 0:6895330887 is in state 'finished'
[2025-11-26 05:58:15] 2025-11-26 04:57:30,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:58:15] 2025-11-26 04:57:30,911 | INFO     | time since job start (89416s) is within the limit (172800.0s)
[2025-11-26 05:58:15] 2025-11-26 04:57:32,919 | INFO     | time since job start (89418s) is within the limit (172800.0s)
[2025-11-26 05:58:15] 2025-11-26 04:57:33,314 | INFO     | monitor loop #6016: job 0:6895330887 is in state 'finished'
[2025-11-26 05:58:15] 2025-11-26 04:57:33,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:58:15] 2025-11-26 04:57:34,927 | INFO     | time since job start (89420s) is within the limit (172800.0s)
[2025-11-26 05:58:15] 2025-11-26 04:57:35,822 | INFO     | monitor loop #6017: job 0:6895330887 is in state 'finished'
[2025-11-26 05:58:15] 2025-11-26 04:57:35,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:58:15] 2025-11-26 04:57:36,020 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 05:58:15] 2025-11-26 04:57:36,021 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-26 05:58:15] 2025-11-26 04:57:36,023 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6895330887/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 05:58:15] 2025-11-26 04:57:36,024 | INFO     | extracted standard info from prmon json
[2025-11-26 05:58:15] 2025-11-26 04:57:36,024 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 05:58:15] 2025-11-26 04:57:36,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 05:58:15] 2025-11-26 04:57:36,058 | INFO     | fitting pss+swap vs Time
[2025-11-26 05:58:15] 2025-11-26 04:57:36,061 | INFO     | sum of square deviations: 955139994893.783
[2025-11-26 05:58:15] 2025-11-26 04:57:36,166 | INFO     | sum of deviations: 4963271721286.439
[2025-11-26 05:58:15] 2025-11-26 04:57:36,167 | INFO     | mean x: 1764088558.1965635
[2025-11-26 05:58:15] 2025-11-26 04:57:36,167 | INFO     | mean y: 2835465.2082474227
[2025-11-26 05:58:15] 2025-11-26 04:57:36,167 | INFO     | intersect: -9164041538.738853
[2025-11-26 05:58:15] 2025-11-26 04:57:36,169 | INFO     | chi2: 29.585620096477356
[2025-11-26 05:58:15] 2025-11-26 04:57:36,171 | INFO     | sum of square deviations: 945327513994.099
[2025-11-26 05:58:15] 2025-11-26 04:57:36,258 | INFO     | sum of deviations: 5442398211823.504
[2025-11-26 05:58:15] 2025-11-26 04:57:36,259 | INFO     | mean x: 1764088405.7006896
[2025-11-26 05:58:15] 2025-11-26 04:57:36,259 | INFO     | mean y: 2842910.5979310344
[2025-11-26 05:58:15] 2025-11-26 04:57:36,259 | INFO     | intersect: -10153289691.656933
[2025-11-26 05:58:15] 2025-11-26 04:57:36,261 | INFO     | chi2: 26.448696787761637
[2025-11-26 05:58:15] 2025-11-26 04:57:36,261 | INFO     | current chi2=26.448696787761637 (change=10.602864832598929 %)
[2025-11-26 05:58:15] 2025-11-26 04:57:36,261 | INFO     | right removable region: 1449
[2025-11-26 05:58:15] 2025-11-26 04:57:36,263 | INFO     | sum of square deviations: 945326451984.0989
[2025-11-26 05:58:15] 2025-11-26 04:57:36,329 | INFO     | sum of deviations: 4342474192427.7495
[2025-11-26 05:58:15] 2025-11-26 04:57:36,333 | INFO     | mean x: 1764088710.7006896
[2025-11-26 05:58:15] 2025-11-26 04:57:36,333 | INFO     | mean y: 2845112.2413793104
[2025-11-26 05:58:15] 2025-11-26 04:57:36,333 | INFO     | intersect: -8100714968.292304
[2025-11-26 05:58:15] 2025-11-26 04:57:36,335 | INFO     | chi2: 24.505310579223586
[2025-11-26 05:58:15] 2025-11-26 04:57:36,335 | INFO     | current chi2=24.505310579223586 (change=17.171549897170017 %)
[2025-11-26 05:58:15] 2025-11-26 04:57:36,336 | INFO     | left removable region: 10
[2025-11-26 05:58:15] 2025-11-26 04:57:36,338 | INFO     | sum of square deviations: 923975004346.6201
[2025-11-26 05:58:15] 2025-11-26 04:57:36,410 | INFO     | sum of deviations: 4360781122510.172
[2025-11-26 05:58:15] 2025-11-26 04:57:36,410 | INFO     | mean x: 1764088680.209868
[2025-11-26 05:58:15] 2025-11-26 04:57:36,411 | INFO     | mean y: 2863353.171646977
[2025-11-26 05:58:15] 2025-11-26 04:57:36,411 | INFO     | intersect: -8322907992.269637
[2025-11-26 05:58:15] 2025-11-26 04:57:36,413 | INFO     | chi2: 16.332433206365604
[2025-11-26 05:58:15] 2025-11-26 04:57:36,413 | INFO     | current memory leak: 4.72 B/s (using 1439 data points, chi2=16.33)
[2025-11-26 05:58:15] 2025-11-26 04:57:36,414 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-26 05:58:15] 2025-11-26 04:57:36,414 | INFO     | ..............................
[2025-11-26 05:58:15] 2025-11-26 04:57:36,414 | INFO     | . Timing measurements:
[2025-11-26 05:58:15] 2025-11-26 04:57:36,414 | INFO     | . get job = 0 s
[2025-11-26 05:58:15] 2025-11-26 04:57:36,414 | INFO     | . initial setup = 15 s
[2025-11-26 05:58:15] 2025-11-26 04:57:36,415 | INFO     | . payload setup = 171 s
[2025-11-26 05:58:15] 2025-11-26 04:57:36,415 | INFO     | . stage-in = 0 s
[2025-11-26 05:58:15] 2025-11-26 04:57:36,415 | INFO     | . payload execution = 88919 s
[2025-11-26 05:58:15] 2025-11-26 04:57:36,415 | INFO     | . stage-out = 7 s
[2025-11-26 05:58:15] 2025-11-26 04:57:36,415 | INFO     | . log creation = 1 s
[2025-11-26 05:58:15] 2025-11-26 04:57:36,415 | INFO     | ..............................
[2025-11-26 05:58:15] 2025-11-26 04:57:36,547 | INFO     | 
[2025-11-26 05:58:15] 2025-11-26 04:57:36,547 | INFO     | job summary report
[2025-11-26 05:58:15] 2025-11-26 04:57:36,547 | INFO     | --------------------------------------------------
[2025-11-26 05:58:15] 2025-11-26 04:57:36,547 | INFO     | PanDA job id: 6895330887
[2025-11-26 05:58:15] 2025-11-26 04:57:36,547 | INFO     | task id: 47556137
[2025-11-26 05:58:15] 2025-11-26 04:57:36,547 | INFO     | errors: (none)
[2025-11-26 05:58:15] 2025-11-26 04:57:36,547 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 05:58:15] 2025-11-26 04:57:36,547 | INFO     | pilot state: finished 
[2025-11-26 05:58:15] 2025-11-26 04:57:36,548 | INFO     | transexitcode: 0
[2025-11-26 05:58:15] 2025-11-26 04:57:36,548 | INFO     | exeerrorcode: 0
[2025-11-26 05:58:15] 2025-11-26 04:57:36,548 | INFO     | exeerrordiag: 
[2025-11-26 05:58:15] 2025-11-26 04:57:36,548 | INFO     | exitcode: 0
[2025-11-26 05:58:15] 2025-11-26 04:57:36,548 | INFO     | exitmsg: OK
[2025-11-26 05:58:15] 2025-11-26 04:57:36,548 | INFO     | cpuconsumptiontime: 342183 s
[2025-11-26 05:58:15] 2025-11-26 04:57:36,548 | INFO     | nevents: 1000
[2025-11-26 05:58:15] 2025-11-26 04:57:36,548 | INFO     | neventsw: 0
[2025-11-26 05:58:15] 2025-11-26 04:57:36,548 | INFO     | pid: 23784
[2025-11-26 05:58:15] 2025-11-26 04:57:36,553 | INFO     | pgrp: 23784
[2025-11-26 05:58:15] 2025-11-26 04:57:36,553 | INFO     | corecount: 8
[2025-11-26 05:58:15] 2025-11-26 04:57:36,553 | INFO     | event service: False
[2025-11-26 05:58:15] 2025-11-26 04:57:36,553 | INFO     | sizes: {0: 2283481, 1: 2284337, 2: 2284365, 13: 2284365, 24: 2284421, 34: 2284449, 45: 2284605, 56: 2284633, 67: 2284661, 78: 2284689, 88: 2284745, 99: 2285053, 11
[2025-11-26 05:58:15] 2025-11-26 04:57:36,553 | INFO     | --------------------------------------------------
[2025-11-26 05:58:15] 2025-11-26 04:57:36,553 | INFO     | 
[2025-11-26 05:58:15] 2025-11-26 04:57:36,553 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-26 05:58:15] 2025-11-26 04:57:36,934 | INFO     | time since job start (89422s) is within the limit (172800.0s)
[2025-11-26 05:58:15] 2025-11-26 04:57:37,113 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,113 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,113 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,113 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,115 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 05:58:15] 2025-11-26 04:57:37,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,115 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 05:58:15] 2025-11-26 04:57:37,116 | INFO     | job 6895330887 has completed (purged errors)
[2025-11-26 05:58:15] 2025-11-26 04:57:37,116 | INFO     | overall cleanup function is called
[2025-11-26 05:58:15] 2025-11-26 04:57:38,148 | INFO     | --- collectZombieJob: --- 10, [23784]
[2025-11-26 05:58:15] 2025-11-26 04:57:38,148 | INFO     | zombie collector waiting for pid 23784
[2025-11-26 05:58:15] 2025-11-26 04:57:38,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 05:58:15] 2025-11-26 04:57:38,148 | INFO     | collected zombie processes
[2025-11-26 05:58:15] 2025-11-26 04:57:38,148 | INFO     | will attempt to kill all subprocesses of pid=23784
[2025-11-26 05:58:15] 2025-11-26 04:57:38,271 | INFO     | process IDs to be killed: [23784] (in reverse order)
[2025-11-26 05:58:15] 2025-11-26 04:57:38,873 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 05:58:15] 2025-11-26 04:57:38,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 05:58:15] 2025-11-26 04:57:38,876 | INFO     | did not find any defunct processes belonging to 23784
[2025-11-26 05:58:15] 2025-11-26 04:57:38,879 | INFO     | did not find any defunct processes belonging to 23784
[2025-11-26 05:58:15] 2025-11-26 04:57:38,935 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 05:58:15] 2025-11-26 04:57:38,935 | INFO     | ready for new job
[2025-11-26 05:58:15] 2025-11-26 04:57:38,935 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 05:58:15] 2025-11-26 04:57:38,941 | INFO     | ***************************************
[2025-11-26 05:58:15] 2025-11-26 04:57:38,941 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 05:58:15] 2025-11-26 04:57:38,941 | INFO     | ***************************************
[2025-11-26 05:58:15] 2025-11-26 04:57:38,941 | INFO     | 
[2025-11-26 05:58:15] 2025-11-26 04:57:38,942 | INFO     | pilot is running in a VM
[2025-11-26 05:58:15] 2025-11-26 04:57:38,942 | INFO     | architecture information:
[2025-11-26 05:58:15] 2025-11-26 04:57:38,956 | INFO     | executing command: cat /etc/os-release
[2025-11-26 05:58:15] 2025-11-26 04:57:39,190 | INFO     | cat /etc/os-release:
[2025-11-26 05:58:15] NAME="CentOS Linux"
[2025-11-26 05:58:15] VERSION="7 (Core)"
[2025-11-26 05:58:15] ID="centos"
[2025-11-26 05:58:15] ID_LIKE="rhel fedora"
[2025-11-26 05:58:15] VERSION_ID="7"
[2025-11-26 05:58:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 05:58:15] ANSI_COLOR="0;31"
[2025-11-26 05:58:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 05:58:15] HOME_URL="https://www.centos.org/"
[2025-11-26 05:58:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 05:58:15] 
[2025-11-26 05:58:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 05:58:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 05:58:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 05:58:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 05:58:15] 
[2025-11-26 05:58:15] 2025-11-26 04:57:39,190 | INFO     | ***************************************
[2025-11-26 05:58:15] 2025-11-26 04:57:39,694 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-26 05:58:15] 2025-11-26 04:57:39,953 | INFO     | sufficient remaining disk space (494701379584 B)
[2025-11-26 05:58:15] 2025-11-26 04:57:39,954 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 05:58:15] 2025-11-26 04:57:39,954 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 05:58:15] 2025-11-26 04:57:39,954 | INFO     | update_server=False
[2025-11-26 05:58:15] 2025-11-26 04:57:39,954 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 05:58:15] 2025-11-26 04:57:39,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:58:15] 2025-11-26 04:57:39,955 | INFO     | aborting loop
[2025-11-26 05:58:15] 2025-11-26 04:57:39,967 | INFO     | all job control threads have been joined
[2025-11-26 05:58:15] 2025-11-26 04:57:40,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 05:58:15] 2025-11-26 04:57:40,384 | INFO     | all payload control threads have been joined
[2025-11-26 05:58:15] 2025-11-26 04:57:40,390 | INFO     | all data control threads have been joined
[2025-11-26 05:58:15] 2025-11-26 04:57:40,960 | INFO     | [job] retrieve thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:40,960 | INFO     | [job] job monitor thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:40,974 | INFO     | [job] control thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:41,087 | INFO     | [payload] validate_post thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:41,210 | INFO     | [job] validate thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:41,223 | INFO     | [payload] failed_post thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:41,390 | INFO     | [payload] control thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:41,396 | INFO     | [data] control thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:41,407 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:41,492 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:41,514 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:41,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:58:15] 2025-11-26 04:57:41,707 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:41,709 | INFO     | [data] copytool_in thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:41,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 05:58:15] 2025-11-26 04:57:42,118 | INFO     | [data] copytool_out thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:42,574 | INFO     | [job] queue monitor thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:45,727 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 05:58:15] 2025-11-26 04:57:48,943 | INFO     | [monitor] cgroup control has ended
[2025-11-26 05:58:15] 2025-11-26 04:57:49,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140239372392256)>', '<ExcThread(monitor, started 140238785599232)>']
[2025-11-26 05:58:15] 2025-11-26 04:57:54,979 | INFO     | all workflow threads have been joined
[2025-11-26 05:58:15] 2025-11-26 04:57:54,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 05:58:15] 2025-11-26 04:57:54,979 | INFO     | traces error code: 0
[2025-11-26 05:58:15] 2025-11-26 04:57:54,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 05:58:15] 2025-11-26 04:58:10,112 | INFO     | PID=17276 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 05:58:15] 2025-11-26 04:58:10,113 | INFO     | .. there are 9 such processes running
[2025-11-26 05:58:15] 2025-11-26 04:58:10,113 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 05:58:15] 2025-11-26 04:58:10,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 05:58:15] 2025-11-26 04:58:10,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 05:58:15] 2025-11-26 04:58:10,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 05:58:15] 2025-11-26 04:58:10,113 | INFO     | [monitor] control thread has ended
[2025-11-26 05:58:15] 2025-11-26 04:58:10,430 [wrapper] ==== pilot stdout END ====
[2025-11-26 05:58:15] 2025-11-26 04:58:10,485 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 05:58:15] 2025-11-26 04:58:10,588 [wrapper] pilotpid: 17276
[2025-11-26 05:58:15] 2025-11-26 04:58:10,670 [wrapper] Pilot exit status: 0
[2025-11-26 05:58:15] 2025-11-26 04:58:11,020 [wrapper] pandaids: 6895330887
[2025-11-26 05:58:15] 2025-11-26 04:58:11,861 [wrapper] cleanup supervisor_pilot 23907 17277
[2025-11-26 05:58:15] 2025-11-26 04:58:11,987 [wrapper] Test setup, not cleaning
[2025-11-26 05:58:15] 2025-11-26 04:58:12,058 [wrapper] apfmon messages muted
[2025-11-26 05:58:15] 2025-11-26 04:58:12,165 [wrapper] ==== wrapper stdout END ====
[2025-11-26 05:58:15] 2025-11-26 04:58:12,267 [wrapper] ==== wrapper stderr END ====
[2025-11-26 05:58:15]  *** Error codes and diagnostics ***
[2025-11-26 05:58:15]     "exeErrorCode": 0,
[2025-11-26 05:58:15]     "exeErrorDiag": "",
[2025-11-26 05:58:15]     "pilotErrorCode": 0,
[2025-11-26 05:58:15]     "pilotErrorDiag": "",
[2025-11-26 05:58:15]  *** Listing of results directory ***
[2025-11-26 05:58:15] total 1346636
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc    576529 Nov 21 22:26 pilot3.tar.gz
[2025-11-26 05:58:15] -rwx------. 1 boinc boinc     36292 Nov 21 22:53 runpilot2-wrapper.sh
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc      5112 Nov 21 22:53 queuedata.json
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc       100 Nov 25 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 05:58:15] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 05:01 run_atlas
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc       105 Nov 25 05:01 job.xml
[2025-11-26 05:58:15] -rw-r--r--. 2 boinc boinc 408390457 Nov 25 05:01 EVNT.47483658._000148.pool.root.1
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc      6391 Nov 25 05:01 init_data.xml
[2025-11-26 05:58:15] -rw-r--r--. 2 boinc boinc     15847 Nov 25 05:01 start_atlas.sh
[2025-11-26 05:58:15] drwxrwx--x. 2 boinc boinc        68 Nov 25 05:01 shared
[2025-11-26 05:58:15] -rw-r--r--. 2 boinc boinc    590095 Nov 25 05:01 input.tar.gz
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc         0 Nov 25 05:01 boinc_lockfile
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc      2785 Nov 25 05:02 pandaJob.out
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc    991801 Nov 25 05:07 agis_schedconf.cvmfs.json
[2025-11-26 05:58:15] drwx------. 5 boinc boinc      4096 Nov 25 05:07 pilot3
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc       533 Nov 26 05:33 boinc_task_state.xml
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc 937663161 Nov 26 05:54 HITS.47556137._001479.pool.root.1
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc      1033 Nov 26 05:55 memory_monitor_summary.json
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc   1516240 Nov 26 05:55 agis_ddmendpoints.agis.ALL.json
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc   2541142 Nov 26 05:55 log.47556137._001479.job.log.tgz.1
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc        95 Nov 26 05:57 pilot_heartbeat.json
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc      8625 Nov 26 05:57 heartbeat.json
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc      8192 Nov 26 05:58 boinc_mmap_file
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc        29 Nov 26 05:58 wrapper_checkpoint.txt
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc       820 Nov 26 05:58 pilotlog.txt
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc  11958597 Nov 26 05:58 log.47556137._001479.job.log.1
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc       353 Nov 26 05:58 output.list
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc       620 Nov 26 05:58 runtime_log
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc  14520320 Nov 26 05:58 result.tar.gz
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc       662 Nov 26 05:58 ZZFLDmdFog8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkjJKDmqVREHn.diag
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc      8817 Nov 26 05:58 runtime_log.err
[2025-11-26 05:58:15] -rw-r--r--. 1 boinc boinc     21445 Nov 26 05:58 stderr.txt
[2025-11-26 05:58:15] HITS file was successfully produced:
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc 937663161 Nov 26 05:54 shared/HITS.pool.root.1
[2025-11-26 05:58:15]  *** Contents of shared directory: ***
[2025-11-26 05:58:15] total 1329284
[2025-11-26 05:58:15] -rw-r--r--. 2 boinc boinc 408390457 Nov 25 05:01 ATLAS.root_0
[2025-11-26 05:58:15] -rw-r--r--. 2 boinc boinc     15847 Nov 25 05:01 start_atlas.sh
[2025-11-26 05:58:15] -rw-r--r--. 2 boinc boinc    590095 Nov 25 05:01 input.tar.gz
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc 937663161 Nov 26 05:54 HITS.pool.root.1
[2025-11-26 05:58:15] -rw-------. 1 boinc boinc  14520320 Nov 26 05:58 result.tar.gz
05:58:16 (13522): run_atlas exited; CPU time 342637.570386
05:58:16 (13522): called boinc_finish(0)

</stderr_txt>
]]>

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